P78363
Gene name |
ABCA4 |
Protein name |
Retinal-specific phospholipid-transporting ATPase ABCA4 |
Names |
ATP-binding cassette sub-family A member 4, RIM ABC transporter, RIM proteinv, RmP, Retinal-specific ATP-binding cassette transporter, Stargardt disease protein |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:24 |
EC number |
7.6.2.1: Linked to the hydrolysis of a nucleoside triphosphate |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
9 structures for P78363
2696 variants for P78363
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs201738997 RCV000408532 RCV001002805 RCV000408483 RCV001814056 RCV000085454 |
1 | M>V | Severe early-childhood-onset retinal dystrophy Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074134 CA227106 RCV002247489 VAR_012493 RCV000085568 RCV000779010 RCV001723665 RCV002051808 rs62645946 |
11 | L>P | Retinitis pigmentosa ABCA4-Related Disorders Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa (rp) FFM [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs761209432 CA26845230 RCV000986377 |
12 | W>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_012494 | 13 | K>del | STGD1 [UniProt] | Yes | UniProt |
|
RCV001280943 rs1662935816 |
14 | N>missing | Generalized choriocapillaris dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084833 | 14 | N>K | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000408591 RCV000085658 CA227220 rs62645957 RCV001075348 |
15 | W>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
VAR_084834 rs868543294 RCV001074656 |
18 | R>P | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinVar dbSNP UniProt |
|
RCV000008356 rs121909205 RCV000085719 VAR_008398 CA227296 RCV001075717 RCV001353024 |
18 | R>W | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA958970 rs770272033 RCV001233348 RCV001353021 |
21 | Q>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
| VAR_084835 | 21 | Q>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA227447 RCV000085858 rs62645942 RCV001102140 COSM913476 |
24 | R>C | Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders endometrium [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000307479 RCV001074842 RCV000398727 RCV000313308 RCV000343691 rs62645958 VAR_008399 COSM254500 RCV000779009 CA227449 RCV000085859 |
24 | R>H | Macular degeneration ABCA4-Related Disorders urinary_tract Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive STGD1; unknown pathological significance [ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000408508 rs886044719 CA10602458 |
29 | L>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001067891 CA341286738 rs1191816747 RCV001074538 |
31 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000085373 rs62642569 RCV001074684 |
37 | L>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000408553 rs61751410 CA226874 RCV000085379 |
41 | W>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs143207212 RCV001102139 CA958924 |
47 | P>L | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001075007 rs557725292 RCV001044124 CA958920 |
52 | H>Q | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA958919 VAR_084836 rs764744217 |
53 | E>missing | CORD3; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
VAR_084836 rs764744217 |
53 | E>del | CORD3; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
|
RCV000085409 rs150774447 RCV000132585 CA226909 |
54 | C>F | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002485454 RCV000408466 rs886044720 CA10602457 |
54 | C>G | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000826094 rs150774447 CA226908 RCV000210980 VAR_008400 RCV000085408 |
54 | C>Y | Severe early-childhood-onset retinal dystrophy Stargardt disease STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084837 | 55 | H>R | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1662606557 RCV001073241 |
56 | F>I | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61748524 RCV000085418 VAR_012495 CA226920 |
58 | N>K | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_012496 | 60 | A>E | STGD1 [UniProt] | Yes | UniProt |
|
rs61751411 CA226928 VAR_012497 RCV000085425 |
60 | A>T | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001073359 rs55732384 CA226931 VAR_008492 RCV000408452 RCV000763051 RCV000085427 |
60 | A>V | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000417747 CA16603771 RCV001075540 rs1057520211 |
62 | P>L | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001352982 rs1355238974 CA341285594 |
62 | P>S | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
| VAR_084838 | 63 | S>P | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000132588 VAR_008401 RCV002490741 RCV000085451 rs62654395 RCV001074366 CA226964 |
65 | G>E | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1 and CORD3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000626666 RCV000414796 VAR_012498 RCV000085457 RCV001198384 CA226972 rs62654397 RCV001074514 |
68 | P>L | Age related macular degeneration 2 Peripheral neuropathy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001074756 VAR_012499 RCV000085456 RCV000408449 RCV000779008 CA226971 rs62654397 |
68 | P>R | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000408521 CA10602454 rs886044722 |
69 | W>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_012500 RCV001000882 RCV001353042 RCV000085464 RCV002466250 CA226983 rs61751412 RCV000787776 |
72 | G>R | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Stargardt disease STGD1; does not affect intracellular vesicle localization; does not affect solubility; significantly reduces N-Ret-PE binding; drastically reduces basal ATPase activity with little or no all trans retinal stimulation [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084839 | 72 | G>V | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000504688 RCV000085466 rs61748526 CA226985 VAR_008402 |
75 | C>G | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
VAR_012501 CA226991 RCV000085472 rs61748527 |
77 | V>E | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
CA341285471 RCV001002848 rs1570433137 |
81 | C>S | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001352948 rs1005271380 RCV001074519 RCV001059911 RCV002471023 |
84 | S>missing | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_085009 | 89 | E>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA341285401 rs1156558540 RCV001100158 |
92 | G>E | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1553196583 RCV001861674 RCV000656498 |
96 | N>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000986376 CA227042 VAR_008403 rs61748529 RCV000085515 |
96 | N>D | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs61748529 CA227041 VAR_008404 RCV000085514 |
96 | N>H | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
CA10588305 rs886039297 VAR_084840 RCV000255898 |
96 | N>K | Variant assessed as Somatic; impact. STGD1; unknown pathological significance [NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA TOPMed dbSNP |
|
rs755691060 VAR_084841 CA958886 |
97 | Y>C | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
rs145133167 RCV001075836 CA958885 RCV000254775 |
98 | N>K | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs62645948 RCV000408568 RCV000085530 |
99 | N>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227065 RCV000085534 RCV001074423 rs61748530 VAR_012502 |
100 | S>P | Retinal dystrophy STGD1; highly decreased protein abundance; highly decreased ATPase activity; highly decreased phospholipid translocase activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV000400700 RCV001100157 CA958865 RCV000377526 RCV000283229 RCV000347578 RCV000408482 RCV001520655 rs201150919 |
106 | Y>F | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs765429911 CA958864 RCV000578767 RCV001376340 COSM1345010 VAR_084842 RCV001075053 |
107 | R>missing | CORD3; unknown pathological significance Variant assessed as Somatic; 0.0 impact. large_intestine Severe early-childhood-onset retinal dystrophy Retinal dystrophy [UniProt, NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_084842 rs765429911 |
107 | R>del | CORD3; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
| VAR_084843 | 108 | D>V | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs766512063 RCV000286803 RCV000341813 RCV000371873 CA958861 RCV000317261 |
111 | E>Q | Macular degeneration Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001199610 rs1662507319 |
116 | A>missing | Cone-rod dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000416105 rs138359497 CA958855 RCV000764208 |
124 | R>C | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001353005 rs1662504407 RCV001871908 |
143 | P>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227179 VAR_084844 RCV000085626 RCV001195926 rs62646860 |
143 | P>L | Age related macular degeneration 2 STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV001860519 rs1012017728 RCV001002847 CA26891178 |
151 | I>T | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV002272126 rs62646861 CA227213 RCV001075709 RCV000085653 COSM465123 RCV000408527 |
152 | R>* | kidney Cone-rod dystrophy 3 (cord3) Variant assessed as Somatic; 0.0 impact. Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy [Cosmic, Ensembl, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001100156 VAR_012503 RCV000408574 RCV000085654 CA227215 RCV000844929 rs62646862 RCV000402682 |
152 | R>Q | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Stargardt disease STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_012504 CA227225 RCV000764207 RCV000622993 RCV000504910 RCV001100155 rs62646863 RCV000085663 RCV000626667 |
156 | I>V | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Inborn genetic diseases STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001029826 rs747950242 RCV001873430 |
163 | L>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1662328590 RCV001075022 |
163 | L>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001449733 RCV001073775 rs61748532 VAR_084845 CA227276 RCV001353027 RCV001196794 RCV000085700 |
172 | G>S | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001199621 rs1662327418 |
173 | L>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084846 | 184 | S>F | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084847 | 184 | S>R | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084848 | 185 | Q>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000348853 rs886044148 RCV001073879 |
189 | E>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000085753 rs281865397 CA227334 VAR_012505 |
190 | Q>H | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV002547063 CA958799 rs200696846 RCV001346506 |
191 | F>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_008405 RCV000085759 rs61748535 CA227340 COSM175318 |
192 | A>T | large_intestine STGD1 [Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM226452 rs185729337 RCV001873490 RCV001100153 CA958797 |
192 | A>V | ABCA4-Related Disorders skin [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001074024 rs1206857720 |
195 | V>L | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001098371 COSM293502 CA958789 rs145065936 RCV000349335 |
199 | A>V | ABCA4-Related Disorders large_intestine [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_012506 RCV000085793 RCV001074695 rs61748536 CA227374 RCV001098370 RCV000986375 RCV000391995 |
206 | S>R | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; reduced basal and retinal-stimulated ATP-hydrolysis [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA341289668 RCV001074408 rs1246844424 RCV002554714 RCV002554713 |
210 | L>Q | Retinal dystrophy Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000008355 CA203216 RCV000179293 RCV000787521 RCV000763050 RCV000085812 RCV001074780 rs61750200 VAR_008406 |
212 | R>C | Cone-rod dystrophy 3 (cord3) Variant assessed as Somatic; 0.0 impact. Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1 and CORD3; common mutation in southern Europe; reduced ATP-binding capacity [Ensembl, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_012507 CA203214 RCV000369853 rs6657239 RCV000369400 RCV000085814 RCV000269487 RCV001098368 RCV000179292 RCV000315191 |
212 | R>H | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001199627 rs1662213462 |
213 | F>missing | Cone-rod dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084849 | 218 | Q>del | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs757557272 CA10588304 RCV001075801 RCV000255556 |
219 | R>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001073757 RCV000408468 CA227418 rs61748537 RCV000085831 |
219 | R>T | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000504919 COSM536614 RCV002470767 CA227420 RCV002498460 rs61748538 RCV000085832 VAR_012508 |
220 | R>C | lung Variant assessed as Somatic; 0.0 impact. Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1 [Cosmic, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000085839 RCV001723670 rs63749055 RCV002513926 RCV001075620 |
223 | K>missing | Severe early-childhood-onset retinal dystrophy Retinitis pigmentosa 19 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA958774 rs147619585 RCV001073933 RCV001048488 VAR_084851 |
223 | K>Q | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001098367 rs540124349 CA958771 RCV000897449 |
225 | V>M | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000901876 rs144310835 CA958767 RCV001098366 |
226 | R>H | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001233979 rs149780335 CA958769 RCV001352988 RCV001196793 |
226 | R>S | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001861442 RCV000415009 rs1057518767 CA16043373 VAR_012509 RCV001199212 |
230 | C>S | Macular degeneration Age related macular degeneration 2 STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001389283 CA341289200 RCV000505124 rs1356104318 |
238 | Q>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000735700 rs755733328 CA341289161 |
239 | W>* | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1553195472 CA341289137 VAR_084852 RCV000504757 |
240 | I>R | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_085010 | 241 | E>D | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000085861 rs62646864 RCV001075613 CA227451 VAR_012510 |
244 | L>P | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001352954 rs1662208443 |
245 | Y>missing | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001240591 rs1662208035 RCV001352995 |
245 | Y>* | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs201136017 CA958757 RCV001074903 |
245 | Y>H | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
| VAR_084853 | 245 | Y>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084854 | 246 | A>T | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_012511 RCV000085862 CA227452 rs62645950 |
247 | N>S | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000085864 rs62646865 VAR_008407 CA227455 |
249 | D>G | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000132594 CA170081 rs62645952 RCV001857474 |
255 | R>C | Variant assessed as Somatic; 0.0 impact. Cone-rod dystrophy 3 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001199628 CA958752 rs148387660 RCV000487903 |
255 | R>H | Cone-rod dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs374851665 CA958751 RCV002491814 RCV001243761 |
256 | V>L | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001198959 rs1661753710 |
262 | D>G | Age related macular degeneration 2 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002522135 RCV000393402 RCV000402094 RCV001241582 RCV000334279 rs567985213 CA958722 RCV000286376 |
264 | R>H | Macular degeneration Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs779743222 RCV001002846 RCV001008400 RCV001074665 RCV001542646 |
279 | D>missing | Stargardt disease Retinal dystrophy Retinitis pigmentosa 19 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000255612 RCV000764206 rs138682163 CA958711 |
280 | M>L | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs141802200 RCV002554732 RCV001074669 CA958708 |
283 | R>G | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001074336 CA10602780 rs886041951 RCV000342885 |
285 | Q>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001268174 RCV001729794 RCV001074574 CA958686 rs781716640 VAR_085011 |
290 | R>W | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
VAR_084855 RCV000180145 RCV001002803 RCV000779007 rs190540405 CA247522 RCV001074732 |
291 | P>L | ABCA4-Related Disorders Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000787527 RCV000505141 RCV000787781 RCV001857213 rs764759172 |
296 | L>missing | Progressive cone dystrophy (without rod involvement) Stargardt disease Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_008408 CA227467 rs61748544 RCV000085873 |
300 | T>N | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001074622 rs1440228037 |
304 | M>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1661669685 RCV001074777 RCV001204394 |
305 | Q>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61748545 RCV001075838 RCV000504769 VAR_012512 RCV000085874 CA227468 |
309 | P>R | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000408588 rs886044723 RCV000513081 CA10602453 |
319 | L>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_084856 | 320 | S>C | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_084857 CA958668 rs747540967 |
326 | Y>missing | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
VAR_084857 rs747540967 |
326 | Y>del | STGD1; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
|
CA227475 RCV001074202 RCV000986374 RCV000085878 rs61751418 |
328 | E>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000085879 VAR_012513 rs61751419 CA227477 |
328 | E>V | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
VAR_012514 rs61748546 RCV000085881 CA227480 |
333 | R>W | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs61748547 RCV000085366 RCV001074142 CA226858 VAR_008409 |
336 | S>C | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
CA10602452 RCV002478825 RCV000408537 rs886044724 |
337 | F>L | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1661663692 RCV001075148 |
339 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61751420 RCV001073495 CA226859 VAR_012515 RCV000085367 |
339 | W>G | Retinal dystrophy FFM [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
| VAR_084858 | 339 | W>del | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000085368 CA226860 RCV000008353 rs61748548 VAR_008410 |
340 | Y>D | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs61748548 RCV000505087 RCV000658516 CA26870533 |
340 | Y>H | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000085369 RCV000986373 rs63749083 RCV001075021 |
342 | D>missing | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341284037 COSM318422 RCV001074077 rs1417184535 RCV002557904 |
345 | Y>C | lung Retinal dystrophy [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar TOPMed dbSNP |
| VAR_084859 | 345 | Y>S | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA226864 RCV001073640 RCV000085371 rs61752389 |
346 | K>T | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs61752390 CA10602451 RCV001074163 CA226869 RCV000085374 RCV000414174 RCV000408494 |
362 | Y>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001257823 RCV000764205 RCV001073759 COSM465119 RCV000986372 RCV001096640 VAR_012516 RCV000085376 CA226872 rs61748549 |
380 | N>K | Autosomal recessive retinitis pigmentosa kidney ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1 [ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1570407032 RCV001002845 |
391 | K>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1661625047 RCV001073698 |
398 | I>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002469377 CA958609 RCV001344435 rs559674920 |
401 | T>S | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001075397 rs913030626 RCV001206811 CA26868971 |
403 | D>V | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA226873 RCV000085377 rs61751264 VAR_008411 |
407 | A>V | STGD1 and CORD3 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000085378 RCV001074409 RCV002513925 CA179692 rs61748550 RCV000152707 |
408 | R>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa 19 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs387906387 RCV000008364 |
409 | R>missing | Retinal dystrophy, early-onset severe [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084860 | 410 | I>T | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084861 | 415 | N>K | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000173679 RCV001073557 rs794726979 VAR_084862 CA239111 |
418 | F>S | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
CA200667 RCV000360724 RCV000408013 RCV000303578 rs3112831 VAR_012517 RCV000173675 RCV000297592 RCV000085383 RCV001096637 |
423 | H>R | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive benign variant [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_085012 | 424 | V>A | STGD1 and RP19; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs886044725 RCV001198958 RCV001091615 RCV000408492 CA10602450 |
431 | W>* | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
| VAR_084863 | 431 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA232811 rs201117452 RCV000490464 RCV000132584 |
432 | E>K | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001266588 rs1448468321 RCV001862574 RCV001074696 |
437 | Q>missing | Inborn genetic diseases Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61752391 RCV000085386 RCV001074256 CA226882 |
439 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_084864 RCV000523526 RCV000387710 RCV001102042 rs770439859 RCV000295678 CA958572 RCV000343633 RCV000330893 |
440 | Y>C | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive CORD3; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000085388 rs61748552 RCV000210294 RCV000504649 CA226886 VAR_008412 |
445 | S>R | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
CA10588920 RCV000256405 rs886039882 RCV000487508 |
447 | Q>* | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs61748554 RCV002509208 RCV000085390 |
448 | M>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs764170051 CA958536 VAR_084865 |
455 | L>M | RP19; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
CA341282199 RCV000986371 RCV001869332 rs1366296798 |
455 | L>Q | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000622340 RCV001808322 COSM536621 RCV001102041 RCV000085395 RCV001002804 CA226892 rs1800548 RCV001002844 RCV001074274 RCV003128228 VAR_008413 |
471 | E>K | lung Retinitis pigmentosa ABCA4-Related Disorders Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Stargardt disease Inborn genetic diseases Retinal dystrophy ARMD2 and STGD1; unknown pathological significance; ATP-binding capacity and retinal stimulation as in wild-type [Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1661577361 RCV001199601 |
485 | G>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
rs145614671 CA958522 RCV002069707 RCV001102040 RCV002556050 |
487 | R>Q | ABCA4-Related Disorders Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084866 | 498 | D>E | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000372835 RCV001764264 RCV000280673 RCV000334517 rs147135304 CA958515 RCV000338004 RCV001102039 |
498 | D>G | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000505559 rs1553193813 RCV001386481 RCV000504841 CA341281905 |
499 | W>* | Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1661575232 RCV001075839 RCV001052785 |
499 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_084867 rs138157885 RCV000378419 RCV000286324 CA958507 RCV001303441 RCV000321513 RCV001073691 RCV001590914 |
508 | R>C | Macular degeneration ABCA4-Related Disorders Variant assessed as Somatic; 4.627e-05 impact. Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Retinal dystrophy STGD1; unknown pathological significance [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs886039299 CA341281841 RCV000787480 |
510 | L>R | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001074731 RCV001002803 RCV000429156 RCV002250625 RCV002272229 CA958502 VAR_084868 rs752786160 RCV000779006 |
511 | R>C | Cone-rod dystrophy 3 (cord3) ABCA4-Related Disorders Cone-rod dystrophy 3 Retinal dystrophy Retinitis pigmentosa 19 Retinitis pigmentosa 19 (rp19) STGD1; unknown pathological significance [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
COSM1181247 RCV000505101 RCV000328209 RCV000512657 RCV001073584 RCV000264059 CA958501 RCV000844930 RCV001102037 RCV000270788 rs140482171 RCV000385092 |
511 | R>H | Macular degeneration ABCA4-Related Disorders large_intestine Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Stargardt disease Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA958498 RCV002539506 rs767631662 RCV001302714 |
515 | Q>K | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs369860406 RCV001102036 CA958496 RCV001314292 |
518 | E>K | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000504926 RCV000504738 rs1553192726 CA341280671 |
519 | C>* | Retinitis pigmentosa Retinal dystrophy Retinitis pigmentosa (rp) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_084869 CA341280676 rs1224959251 |
519 | C>R | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt dbSNP gnomAD |
|
RCV000085402 CA226900 rs62646868 VAR_008414 |
523 | D>E | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
| VAR_012518 | 525 | F>C | STGD1 [UniProt] | Yes | UniProt |
|
rs886044727 RCV000408522 CA10602448 |
528 | Y>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs764995626 RCV001075729 CA958472 RCV002554770 |
529 | N>S | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
| VAR_084870 | 533 | Q>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000505043 RCV001074843 VAR_012519 rs61748556 RCV000408566 RCV000085405 CA226904 |
537 | R>C | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000276834 rs61752395 RCV001353019 RCV000315522 RCV000085407 RCV001100054 RCV000363019 RCV001074421 RCV000369062 CA226906 |
537 | R>H | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001257824 rs1661179785 |
539 | L>missing | Autosomal recessive retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
rs748615703 RCV001314112 RCV001100052 CA958465 RCV002554953 |
539 | L>V | ABCA4-Related Disorders Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000498003 rs1553192715 |
541 | L>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000008359 RCV000408513 VAR_008415 RCV001002385 RCV000085410 RCV000505133 RCV000008358 RCV000787481 rs61751392 RCV001196126 RCV000504750 CA226911 RCV000787482 |
541 | L>P | Cone-rod dystrophy 3 (cord3) Retinitis pigmentosa Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy Retinitis pigmentosa (rp) STGD1, FFM and CORD3; reduced ATP-binding capacity; abolishes retinal-stimulated ATP hydrolysis; does not affect solubility; does not affect intracellular vesicle localization; significantly reduces substrate binding; drastically reduces basal ATPase activity with little or no substrate stimulation [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001257842 RCV000171452 rs793888523 |
545 | N>missing | Autosomal recessive retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084871 | 548 | W>R | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA226914 VAR_012520 rs61748557 RCV000085412 |
549 | A>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
CA347915 rs61748557 RCV002517367 RCV000203500 |
549 | A>T | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000085413 RCV001074836 VAR_012521 RCV000761253 RCV000763048 RCV000778263 CA226915 rs61748558 RCV000782281 |
550 | G>R | ABCA4-Related Disorders Cone-rod dystrophy 3 Retinitis pigmentosa 19 Retinal dystrophy Retinitis pigmentosa 19 (rp19) STGD1 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000378123 RCV000408576 RCV000286087 rs145525174 RCV000343411 RCV001100050 RCV000416079 VAR_012522 RCV001075051 CA239745 RCV000174239 RCV000390005 |
552 | V>I | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive Retinal dystrophy RP19; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1570393848 CA341280214 COSM1688060 RCV000787010 TCGA novel |
559 | W>* | Variant assessed as Somatic; impact. skin Cone-rod dystrophy 3 [NCI-TCGA, Cosmic, ClinVar] | Yes |
NCI-TCGA ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV001295365 CA958455 rs765891059 RCV002468632 |
565 | P>H | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001100048 rs74516571 RCV000132586 CA232813 RCV001075527 |
567 | V>M | ABCA4-Related Disorders Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001074238 RCV000085417 CA226919 rs61748559 VAR_008416 |
572 | R>P | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000085416 RCV001074326 VAR_008417 RCV000008357 CA226918 rs61748559 |
572 | R>Q | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
| VAR_084872 | 572 | R>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000408573 rs886044728 CA10602447 RCV000787483 |
573 | M>I | Severe early-childhood-onset retinal dystrophy Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs374224955 RCV001073439 CA958448 RCV001862502 VAR_084873 |
576 | D>H | Retinal dystrophy found in a patient with pattern dystrophy; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001352949 rs1661175744 |
581 | T>N | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001067671 RCV001074327 CA958444 rs368362755 |
582 | N>S | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs145265791 RCV001005006 CA958443 RCV001377733 RCV001075802 |
583 | K>N | Cone-rod dystrophy 3 (cord3) Cone-rod dystrophy 3 Retinal dystrophy [Ensembl, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1570393727 RCV001002842 RCV001325162 CA341279874 |
586 | D>E | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001075431 rs1661175150 RCV001370638 |
587 | R>G | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001075234 RCV002557923 rs1661166945 |
587 | R>S | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1557787559 RCV001008622 RCV000754585 |
589 | W>missing | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084874 | 593 | P>L | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000085424 CA226926 RCV000408487 rs61751393 |
597 | P>S | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000408533 CA10602446 rs886044729 |
598 | V>G | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002481977 RCV001053452 rs201838557 CA958421 |
598 | V>M | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000387613 CA226933 VAR_012523 RCV000273447 rs61749410 RCV000778262 RCV000330796 RCV000277127 RCV000085429 |
602 | R>Q | Macular degeneration Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive STGD1 [ClinVar, NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV002250560 RCV002498452 rs61749409 RCV000504951 RCV000408597 RCV000085428 RCV001849310 RCV001723664 CA226932 RCV001353025 RCV000850520 VAR_008418 |
602 | R>W | Cone-rod dystrophy 3 (cord3) Variant assessed as Somatic; 0.0 impact. Retinitis pigmentosa ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy Retinitis pigmentosa 19 Retinitis pigmentosa (rp) Retinitis pigmentosa 19 (rp19) STGD1 [Ensembl, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_084875 | 603 | Y>C | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1064793006 RCV000486363 CA16617211 RCV001074372 |
603 | Y>H | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_084876 | 605 | W>del | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_012524 RCV000787762 CA226936 RCV001239085 rs61749412 RCV000408475 RCV001100047 RCV000085431 RCV001075859 RCV000625951 CA341279593 |
607 | G>R | Cone-rod dystrophy 3 ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs61749412 CA226937 RCV000085432 VAR_012525 |
607 | G>W | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001090315 VAR_008419 RCV000408543 RCV001723810 RCV001074552 rs61752398 CA958417 |
608 | F>I | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1; moderately decreased protein abundance; highly decreased ATPase activity; highly decreased phospholipid translocase activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002272222 CA16042375 RCV000414682 rs1057517700 |
612 | Q>* | Variant assessed as Somatic; impact. Retinitis pigmentosa 19 Retinitis pigmentosa 19 (rp19) [NCI-TCGA, ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV000008342 rs61751386 RCV000085435 |
616 | E>missing | Retinitis pigmentosa 19 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341279484 rs1557787473 RCV000986370 VAR_084877 RCV001002841 RCV001858641 |
616 | E>K | Severe early-childhood-onset retinal dystrophy Stargardt disease STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001075608 rs1661163134 RCV001389149 |
618 | G>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1661162346 RCV002557922 RCV001075222 |
619 | I>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs878853396 RCV000225610 CA10581652 |
625 | Q>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000408594 CA10602445 rs886044730 |
631 | G>R | Variant assessed as Somatic; impact. Severe early-childhood-onset retinal dystrophy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
CA226949 RCV000085440 RCV000408491 rs61749414 |
635 | Q>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA226948 rs61749414 VAR_012526 RCV001074535 RCV000085439 |
635 | Q>K | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV002518745 CA10588302 RCV000256006 RCV000504776 rs145961131 RCV001075471 |
636 | Q>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa 19 [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
RCV000085441 rs61752400 CA226951 VAR_012527 |
636 | Q>H | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_084878 | 636 | Q>K | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs61749415 CA226952 RCV001074066 RCV000085442 |
639 | Y>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
| VAR_084879 | 639 | Y>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs766570903 RCV000408560 CA10602444 |
640 | P>A | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
VAR_085013 RCV000439383 CA16603707 rs760790294 RCV001073702 |
640 | P>L | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
CA226956 VAR_084880 rs61749416 RCV000085444 |
641 | C>S | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV001098278 CA226958 RCV001074170 RCV000085446 VAR_008420 rs61754024 RCV000408583 |
643 | V>G | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy CORD3; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000353201 RCV001098279 RCV000318324 RCV000356519 RCV000986369 rs61749417 VAR_012528 RCV000085445 RCV001075850 RCV000260757 CA201008 RCV000174470 |
643 | V>M | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_008421 RCV001074983 rs61749418 RCV000085447 CA226960 |
645 | D>N | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV000763047 RCV001074668 rs61749420 RCV000085452 VAR_012529 RCV000408546 CA226965 |
653 | R>C | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; very low substrate binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
VAR_084881 RCV000484928 rs141823837 CA958377 RCV001075584 |
653 | R>H | Retinal dystrophy STGD1; unknown pathological significance; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; very low substrate binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC dbSNP gnomAD |
|
RCV001002840 RCV000786893 rs141823837 CA341278906 |
653 | R>L | Cone-rod dystrophy 3 Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001075570 RCV000408459 CA347415 rs200692438 RCV000194199 RCV001071977 RCV002485297 |
655 | F>C | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084882 | 661 | L>R | CORD3; unknown pathological significance; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [UniProt] | Yes | UniProt |
|
RCV000504673 rs1553192432 |
662 | A>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA16042332 rs865990202 RCV001353030 RCV000414150 |
663 | W>* | Retinitis pigmentosa 19 Retinitis pigmentosa 19 (rp19) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001074567 RCV001376519 CA958369 RCV001381381 rs757302286 |
665 | Y>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000085455 rs61749422 RCV001074028 RCV001353038 |
669 | M>missing | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1661098509 RCV001199603 |
671 | V>missing | Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
CA958364 rs575453437 RCV000329208 RCV001074658 RCV000478104 |
675 | V>I | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000585482 CA341278681 RCV001073835 rs1553192420 |
679 | E>V | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000210310 RCV001195987 CA226973 RCV000408512 rs61749423 RCV000504983 RCV000085458 RCV001073628 |
681 | R>* | Variant assessed as Somatic; 0.0 impact. Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Leber congenital amaurosis Benign concentric annular macular dystrophy Retinal dystrophy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA226975 rs61752402 RCV000085459 VAR_012530 |
686 | L>S | STGD1; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_084884 | 690 | G>V | STGD1; unknown pathological significance; severely decreases solubility; loss of cytoplasmic vesicle localization; very low substrate binding [UniProt] | Yes | UniProt |
|
RCV001098275 TCGA novel CA341278588 rs1454888484 |
693 | N>K | ABCA4-Related Disorders Variant assessed as Somatic; impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD NCI-TCGA |
|
rs61749425 RCV001074306 CA226978 RCV000085461 |
700 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
| VAR_084885 | 700 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV002554700 rs374152623 RCV001074145 RCV001368631 CA958348 COSM913459 |
709 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium Retinal dystrophy Inborn genetic diseases [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_012531 rs61749426 CA226982 RCV000085463 |
716 | T>M | Variant assessed as Somatic; 0.0 impact. STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; decreases N-Ret-PE binding in the range of 40-70% [NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1660994342 RCV001073596 |
748 | C>Y | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001073242 rs1660994125 RCV001862489 |
751 | L>P | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084886 | 754 | F>S | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA10610471 RCV000407927 RCV001226620 RCV000302117 rs886046566 RCV000359118 RCV001098274 RCV000305429 |
760 | L>V | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_067427 | 762 | A>E | ARMD2 [UniProt] | Yes | UniProt |
|
rs61749428 RCV000085467 CA226986 RCV000408455 RCV001074411 VAR_012532 |
764 | C>Y | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; decreases N-Ret-PE binding in the range of 40-70% [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
VAR_012534 RCV001002839 CA226988 RCV000085469 rs61749429 |
765 | S>N | Stargardt disease STGD1; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
rs61752404 CA226989 RCV000085470 VAR_012533 |
765 | S>R | STGD1; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
CA226990 RCV001074642 VAR_012535 RCV000408526 rs61751395 RCV000085471 |
767 | V>D | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; also found in a patient with macular dystrophy; severely decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; severely decreases N-Ret-PE-stimulated ATPase activity; very low substrate binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001196396 rs764727316 |
773 | Y>C | Age related macular degeneration 2 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_085014 | 779 | C>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084887 | 782 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1660946056 RCV001377472 RCV001280944 |
795 | S>R | Generalized choriocapillaris dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000085477 VAR_012536 rs61749432 CA226998 |
797 | L>P | STGD1; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA958275 RCV001064178 RCV002469338 rs542919944 |
799 | P>L | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001073511 RCV001683659 RCV001353035 rs374410829 RCV000778261 CA26843455 |
801 | A>T | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
rs1570386206 RCV000787484 |
803 | G>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1660945050 RCV001073968 |
803 | G>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084888 | 808 | Y>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084889 | 816 | G>V | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs61750202 RCV000085479 RCV002250561 RCV001075477 CA227000 VAR_008422 RCV000787774 |
818 | G>E | Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy ARMD2 and STGD1; reduced ATP-binding capacity; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase; very low substrate binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA341277042 rs61749433 CA227001 RCV000085480 RCV001075705 RCV000023140 VAR_008423 |
821 | W>R | Retinal dystrophy Severe early-childhood-onset retinal dystrophy STGD1; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase; very low substrate binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_012537 | 824 | I>T | STGD1; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase; very low substrate binding [UniProt] | Yes | UniProt |
|
CA958263 rs368367104 RCV001213685 RCV001376391 |
825 | G>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001362943 CA958262 rs144018419 RCV001096537 |
827 | S>T | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001205677 RCV001096536 rs139250920 CA958261 |
829 | T>M | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084890 | 840 | M>R | STGD1; unknown pathological significance; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [UniProt] | Yes | UniProt |
|
rs1660938514 RCV001096533 |
845 | L>V | ABCA4-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341276870 RCV000986367 rs779466403 |
846 | D>G | Severe early-childhood-onset retinal dystrophy Retinitis pigmentosa (rp) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA16603706 RCV000787485 RCV001074641 rs779466403 RCV000430954 |
846 | D>V | Retinitis pigmentosa Variant assessed as Somatic; impact. Retinal dystrophy Retinitis pigmentosa (rp) [ClinVar, NCI-TCGA, Ensembl] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV001074506 rs61749435 RCV000085485 CA227008 RCV000986366 VAR_012538 |
849 | V>A | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; decreases N-Ret-PE binding in the range of 40-70% [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_008424 rs61749436 CA227009 RCV000085486 |
851 | G>D | STGD1; highly reduced ATP-binding capacity; severely decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity; very low substrate binding [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001199605 rs1660937747 |
852 | L>missing | Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61749437 RCV001075467 RCV000504877 CA227010 RCV000085487 VAR_012539 |
854 | A>T | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase; decreases N-Ret-PE binding in the range of 40-70% [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
rs61749438 RCV000008334 CA227013 RCV000085489 |
855 | W>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs61752406 RCV000085488 CA227011 RCV000408572 RCV001073601 |
855 | W>* | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000481787 rs201223321 CA10581651 RCV000225582 |
856 | Y>N | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001075787 CA958244 rs768435443 RCV003117742 |
857 | L>P | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs61752407 RCV000085490 RCV001542644 |
858 | D>missing | Retinitis pigmentosa 19 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074539 RCV002505665 rs140281495 CA958243 RCV001346357 |
859 | Q>R | Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000787487 RCV000408474 RCV000408579 RCV000008328 RCV000505063 RCV000787768 VAR_008425 RCV000415097 RCV001535670 RCV000787486 RCV001352969 RCV000623365 RCV000085494 CA119128 RCV000008329 RCV001198385 rs76157638 COSM328066 |
863 | G>A | Retinitis pigmentosa Cone-rod dystrophy 3 Peripheral neuropathy Inborn genetic diseases Retinitis pigmentosa (rp) Cone-rod dystrophy 3 (cord3) pancreas Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy Cone-rod dystrophy STGD1, FFM and CORD3; also found in a patient with bull's eye maculopathy; mild alteration probably leading to disease phenotype only in combination with a more severe allele; frequent mutation in northern Europe in linkage disequilibrium with the polymorphic variant Q-943; reduced ATP-binding capacity and retinal-stimulated ATP hydrolysis; significantly attenuates 11-cis-retinal binding; decreases about 80% the N-retinylidene-phosphatidylethanolamine transport activity; stimulates modestely the retinal-stimulated ATPase activity; does not affect ATP-independent N-retinylidene-phosphatidylethanolamine binding. Does not affect ATP-dependent release of N-retinylidene-phosphatidylethanolamine; significantly reduces phosphatidylethanolamine flippase activity [ClinVar, Ensembl, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_012540 | 863 | G>del | STGD1 and CORD3; reduced ATP-binding capacity and retinal-stimulated ATP hydrolysis [UniProt] | Yes | UniProt |
|
CA958220 rs746566873 RCV000408530 RCV000490201 RCV001074708 |
870 | P>L | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1570382663 RCV002466581 RCV000787488 CA341276158 |
871 | W>* | Retinitis pigmentosa Cone-rod dystrophy 3 Retinitis pigmentosa (rp) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs62642560 RCV000008360 RCV000085495 |
873 | F>missing | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_012541 rs62642570 CA227018 RCV000085496 |
873 | F>L | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001073797 RCV001068714 rs1660843703 |
876 | Q>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084891 | 876 | Q>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1570380080 RCV000787489 |
894 | L>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000315748 RCV000280747 RCV000408596 RCV001096530 VAR_012542 RCV001197697 RCV000375069 RCV000260644 RCV000085500 rs61749440 CA227022 |
897 | T>I | Macular degeneration ABCA4-Related Disorders Age related macular degeneration 2 Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001280945 RCV001381439 rs1660762877 |
898 | E>missing | Generalized choriocapillaris dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61749441 RCV000408471 CA10602442 |
898 | E>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs61749441 RCV000085501 RCV001101957 CA227023 COSM1126915 |
898 | E>K | ABCA4-Related Disorders prostate [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085502 RCV002470763 CA227025 rs61754030 VAR_008426 RCV001101956 RCV000787777 |
901 | T>A | ABCA4-Related Disorders Stargardt disease Cone-rod dystrophy [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001853370 rs869312184 RCV000210324 RCV000785052 |
905 | E>missing | ABCA4-Related Disorders Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1660761326 RCV001199607 |
911 | E>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002553324 rs376526710 CA958161 RCV001053608 |
920 | R>H | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001270179 RCV002561021 rs985690206 CA26840906 |
927 | P>S | Stargardt disease 3 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000078663 CA220679 RCV001074049 rs398123337 |
928 | G>W | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA26840893 rs58331765 RCV001073459 |
931 | V>L | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085506 RCV000364229 RCV001002838 RCV001073603 VAR_008427 CA227031 RCV000308729 RCV000392935 RCV001101952 rs58331765 RCV002247267 RCV000314132 RCV000008330 RCV001807722 |
931 | V>M | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Stargardt disease Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive Retinitis pigmentosa 19 Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000132589 CA345716 rs527236129 |
933 | N>I | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs61749444 RCV000085507 VAR_012544 CA227032 |
935 | V>A | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs149071415 CA958148 RCV000504891 RCV001047033 |
938 | F>S | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000171156 rs786205447 CA235750 RCV001257843 |
939 | E>* | Autosomal recessive retinitis pigmentosa [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001075267 CA958146 rs144995371 RCV001101951 RCV002487242 RCV000316390 |
940 | P>R | ABCA4-Related Disorders Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002499633 CA958143 RCV001323880 rs1801581 |
943 | R>L | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA119146 RCV000294335 RCV000008374 RCV000349295 RCV000399411 VAR_008428 RCV001002837 RCV000392936 RCV000152706 RCV001101950 rs1801581 RCV000008375 RCV000085512 |
943 | R>Q | Macular degeneration ABCA4-Related Disorders MACULAR DEGENERATION, AGE-RELATED, 2, SUSCEPTIBILITY TO Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Stargardt disease Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive linkage disequilibrium with A-863 in the European population and STGD1; found in a patient with macular dystrophy; unknown pathological significance; decreases 11-cis-Retinal binding affinity by 100-fold [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA227037 rs61749446 RCV000085510 RCV001074959 VAR_012545 |
943 | R>W | Retinal dystrophy STGD1 and FFM [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085513 VAR_084892 CA227039 rs61749447 |
954 | Y>D | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000078664 RCV001074052 rs398123338 CA220681 |
957 | Q>K | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001075731 rs61749448 CA227043 RCV000085516 VAR_008429 |
957 | Q>R | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000278622 RCV000338922 RCV000425865 RCV000778260 RCV000323631 RCV000373695 rs368846708 CA958130 RCV000408538 |
959 | T>A | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs61752409 RCV000085517 VAR_012546 CA227044 |
959 | T>I | STGD1; moderately decreased protein abundance; highly decreased ATPase activity; highly decreased phospholipid translocase activity [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001199608 CA958129 RCV000488184 RCV001099950 rs368846708 |
959 | T>S | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs61752410 RCV000986365 RCV000085520 RCV000008363 |
963 | G>missing | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227048 RCV001073897 RCV000085521 rs61749449 |
965 | N>D | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1570377861 RCV001074143 RCV000787765 CA341275328 |
965 | N>K | Stargardt disease Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000787770 RCV000787491 RCV001074886 VAR_008430 RCV000787490 rs201471607 RCV000408500 RCV000787492 CA958124 RCV000413621 |
965 | N>S | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy Cone-rod dystrophy Retinitis pigmentosa (rp) STGD1; reduced retinal-stimulated ATP hydrolysis; moderately decreased protein abundance; highly decreased ATPase activity; highly decreased phospholipid translocase activity; decreases about 60% the N-retinylidene-phosphatidylethanolamine transfer activity; stimulates modestly the retinal-stimulated ATPase activity; does not affect ATP-independent N-retinylidene-phosphatidylethanolamine binding; does not affect ATP-dependent release of N-retinylidene-phosphatidylethanolamine; significantly reduces phosphatidylethanolamine flippase activity [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084893 | 965 | N>Y | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA341275301 VAR_084894 rs1570377849 |
970 | T>P | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
|
rs61749450 RCV000085522 CA227050 RCV000999861 VAR_012547 RCV002225080 |
971 | T>N | Severe early-childhood-onset retinal dystrophy STGD1; highly reduced ATP-binding capacity; abolishes retinal-stimulated ATP hydrolysis [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
CA958123 rs745825311 RCV001227523 RCV001074155 |
971 | T>P | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
VAR_012548 RCV000085523 RCV000504717 rs61749451 RCV002498454 RCV000505078 CA227051 |
972 | T>N | Retinitis pigmentosa Cone-rod dystrophy 3 Retinal dystrophy Retinitis pigmentosa (rp) STGD1; unknown pathological significance [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084895 | 973 | L>S | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001075843 VAR_012549 RCV000085524 rs281865400 CA227053 |
974 | S>P | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs863223338 RCV000201475 |
976 | L>missing | Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084896 | 977 | T>P | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA227054 VAR_008431 rs61749452 RCV000085525 |
978 | G>C | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
rs61749453 VAR_084897 CA227055 RCV000085526 |
978 | G>D | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001353029 rs61749452 RCV001871909 CA26839909 |
978 | G>S | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs886044734 RCV000408600 CA10602440 |
980 | L>F | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001352962 RCV001040117 rs1368508052 CA341275224 |
983 | T>A | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs61752411 CA227057 RCV000085527 RCV001099946 RCV001075282 |
983 | T>I | ABCA4-Related Disorders Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1660624360 RCV001075295 |
985 | G>V | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61749454 RCV000085529 RCV000504904 RCV001074424 VAR_012550 CA227059 |
989 | V>A | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA958086 rs552307838 RCV001203658 RCV001099944 |
989 | V>I | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001073380 CA227061 RCV000505091 VAR_012551 RCV000085531 CA341275181 RCV002247488 rs61749455 |
991 | G>R | Age related macular degeneration 2 Retinal dystrophy FFM and STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1306732480 RCV001074610 RCV001063353 |
994 | I>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs546606452 RCV001270349 RCV001040975 CA958084 |
994 | I>V | Retinitis pigmentosa [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1660620340 RCV001075714 |
1006 | G>D | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1660620409 RCV001376520 RCV001294592 |
1006 | G>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074067 rs1660620146 |
1008 | C>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61749456 RCV000085540 VAR_012552 CA227072 |
1014 | L>R | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
rs61749457 CA227075 RCV000085543 VAR_012553 |
1019 | T>A | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
VAR_012554 RCV000412846 rs201855602 CA958052 RCV001002835 RCV001074386 |
1019 | T>M | Variant assessed as Somatic; 0.0 impact. Stargardt disease Retinal dystrophy STGD1 [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA341292703 rs112300381 RCV001074253 RCV001367808 |
1020 | V>E | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1570373408 RCV001312082 RCV001029969 |
1021 | A>missing | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084898 | 1022 | E>G | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs61749459 RCV000408496 CA227078 RCV000085545 VAR_012555 |
1022 | E>K | Severe early-childhood-onset retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
CA958048 RCV002486156 RCV001300386 rs369703217 |
1026 | F>L | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000504918 rs1553190664 CA341292652 |
1027 | Y>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs121909204 RCV001040974 RCV000008331 CA340711 |
1028 | A>V | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000085546 rs61751397 CA227079 RCV000408564 |
1029 | Q>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_084899 | 1029 | Q>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000085547 VAR_012556 CA227081 rs61750060 |
1031 | K>E | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs886044735 RCV000408456 RCV000449544 RCV001543589 |
1032 | G>missing | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs878853397 RCV000225375 |
1033 | K>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001856325 RCV001098165 rs771234031 CA26866357 |
1033 | K>E | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001098164 rs748585116 |
1034 | S>T | ABCA4-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227082 RCV000008337 RCV000085548 VAR_008432 rs61750061 |
1036 | E>K | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000008359 RCV000778259 RCV000008348 RCV001000014 RCV000008350 RCV000787495 RCV001196125 VAR_008433 RCV000763046 RCV000505109 RCV000787494 RCV000008358 RCV000085549 rs61751374 RCV000787493 CA119135 |
1038 | A>V | Cone-rod dystrophy 3 (cord3) Retinitis pigmentosa ABCA4-Related Disorders Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy Retinitis pigmentosa (rp) STGD1, FFM and CORD3; frequent mutation; reduced ATP-binding and retinal-stimulated ATP hydrolysis; decreases solubility at 70%; does not affect intracellular vesicle localization; significantly reduces substrate binding in the absence of ATP; reduces basal ATPase activity [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA227083 RCV000085550 rs61750062 COSM3401100 VAR_084900 |
1050 | G>D | Variant assessed as Somatic; 0.0 impact. central_nervous_system STGD1; unknown pathological significance [NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_012557 RCV000085551 rs61752412 CA227085 |
1055 | R>W | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs772663974 CA958030 RCV001352946 RCV001871906 |
1060 | Q>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
VAR_012558 CA227086 rs61752413 RCV000085552 |
1063 | S>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA10588300 rs886039300 RCV001199609 RCV001075837 RCV000255987 |
1065 | G>D | Retinal dystrophy Cone dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs775661924 CA958009 RCV000346419 RCV001098163 RCV000283211 RCV000342791 RCV000377692 |
1069 | K>R | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000008338 RCV000085558 rs61750064 |
1071 | S>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001073604 RCV000787775 RCV000504931 rs387906385 RCV000413475 |
1071 | S>missing | Bietti crystalline corneoretinal dystrophy Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
COSM198611 RCV002255094 rs61750065 RCV000085559 CA227093 VAR_008434 |
1071 | S>L | Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders large_intestine STGD1; reduced ATP-binding capacity [NCI-TCGA, ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ExAC NCI-TCGA TOPMed dbSNP |
| VAR_008435 | 1072 | V>A | STGD1 [UniProt] | Yes | UniProt |
| VAR_084901 | 1074 | I>L | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084902 | 1078 | G>E | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001074403 rs1660532299 |
1079 | D>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61751398 RCV000505122 CA341292154 |
1087 | E>* | Congenital stationary night blindness [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001075184 RCV000085563 RCV000408551 VAR_012559 CA227098 rs61752416 |
1087 | E>D | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA227097 RCV001199228 RCV000085562 RCV001075833 rs61751398 RCV001814057 RCV002498455 VAR_008436 RCV001808323 RCV002466427 |
1087 | E>K | Age related macular degeneration 2 Cone-rod dystrophy 3 Retinitis pigmentosa 19 Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000085564 RCV001198727 VAR_012560 CA227099 RCV000408464 rs61752417 |
1091 | G>E | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy FFM and STGD1; decreases solubilized at 70%; does not affect intracellular vesicle localization; does not affect substrate binding; drastically reduces basal ATPase activity with little or no substrate stimulation [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs1237125868 RCV001074251 |
1093 | D>E | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084903 | 1094 | P>T | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs886044731 RCV000408579 CA10602438 RCV001092802 |
1097 | R>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
| VAR_012561 | 1097 | R>C | STGD1 [UniProt] | Yes | UniProt |
|
RCV001074565 rs61750118 VAR_084904 |
1097 | R>S | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinVar dbSNP UniProt |
|
CA957993 RCV000408518 rs756840095 RCV001074682 VAR_084905 RCV000478178 RCV001196593 |
1098 | R>C | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
VAR_084907 RCV000085567 rs61750119 CA227104 |
1099 | S>P | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_084906 | 1099 | S>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000504826 RCV001857212 rs1553190559 CA341291996 |
1100 | I>N | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002557911 CA957989 rs373868915 RCV001074446 |
1101 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
rs61752419 CA227107 RCV000085569 RCV000505014 |
1101 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001353018 rs1660527879 |
1108 | R>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002490678 rs61750120 RCV000150052 CA220683 RCV001195927 RCV001074904 RCV001352953 RCV001002834 VAR_012562 RCV000078665 |
1108 | R>C | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1 and FFM; reduced ATP-binding capacity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs61750121 CA227109 COSM1345001 RCV000085570 RCV001073697 VAR_012563 |
1108 | R>H | large_intestine Retinal dystrophy STGD1 [Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs61750121 CA227110 RCV000408460 VAR_012564 RCV000085571 |
1108 | R>L | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs61750122 RCV000085573 CA227112 VAR_008437 |
1112 | T>N | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV001073572 CA227113 RCV000085574 RCV000023141 rs61751399 VAR_008438 RCV000504768 |
1122 | E>K | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa (rp) STGD1 and CORD3 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001854781 RCV000408515 CA10602437 rs1047376 |
1126 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000787496 RCV001873209 CA341291128 rs1570370929 |
1127 | G>E | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1660481072 RCV001074500 |
1127 | G>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1660480861 RCV001073403 |
1128 | D>G | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs779426136 CA957945 RCV000413704 RCV000385765 VAR_012565 |
1129 | R>C | ABCA4-Related Disorders STGD1; may predispose to develop retinal toxicity after treatment with chloroquine and hydroxychloroquine [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000986364 rs779426136 CA341291096 |
1129 | R>G | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA341291094 RCV001073590 rs1801269 |
1129 | R>H | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
VAR_008439 RCV000408578 RCV000763045 CA227116 RCV001199211 RCV001075726 RCV000085576 rs1801269 |
1129 | R>L | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy ARMD2 and STGD1; also found in patients with fundus flavimaculatus; reduced ATP-binding capacity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA16617206 RCV000485764 rs1064793010 VAR_084909 |
1130 | I>T | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA341291026 RCV001073312 rs1432207212 RCV002554655 |
1133 | I>T | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001386130 RCV001075236 rs1660480045 |
1136 | G>E | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1287053724 CA341290944 RCV001074053 RCV001300385 |
1138 | L>P | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002497485 RCV001073352 CA957943 RCV001220401 rs150895509 |
1139 | Y>C | Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084910 | 1140 | C>W | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_084911 | 1145 | L>H | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001074510 rs375783686 RCV001041420 CA957937 |
1150 | C>Y | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001002833 rs1570370826 |
1150 | C>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1340749727 VAR_084912 CA341290608 |
1159 | L>S | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP |
|
CA957928 RCV000408467 rs768278935 RCV000761669 RCV002267731 VAR_084913 RCV001257844 |
1161 | R>H | Autosomal recessive retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_084914 | 1177 | C>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001854782 rs886044736 RCV000408539 |
1178 | S>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs760620913 RCV001349961 CA957901 RCV001096428 |
1178 | S>N | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001075131 rs267598773 RCV002514314 RCV000842622 CA957900 |
1180 | S>L | Retinal dystrophy Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000008369 rs387906388 |
1181 | S>missing | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA957897 RCV000261992 RCV001096426 rs75267647 RCV000297212 RCV000356767 RCV000894101 RCV001073731 VAR_084915 RCV000331144 |
1183 | G>C | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive CORD3; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001096425 CA957894 RCV001399105 rs368692594 |
1190 | A>T | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA957893 rs770363333 RCV001096424 |
1192 | V>I | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001199611 rs1660447204 |
1195 | L>missing | Cone dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000305309 RCV000391783 rs370967816 RCV000360005 RCV000260569 RCV001096422 RCV002520513 CA957889 |
1196 | T>S | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000340328 RCV000085583 RCV000308786 RCV001096421 CA119137 RCV000176456 RCV000408567 RCV000401597 RCV000008361 VAR_008440 rs61750126 RCV000343774 |
1201 | L>R | Macular degeneration Cone-rod dystrophy 3 (cord3) ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive STGD1; may predispose to develop retinal toxicity after treatment with chloroquine and hydroxychloroquine [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_084916 | 1203 | G>D | STGD1 [UniProt] | Yes | UniProt |
|
CA957869 RCV000597651 RCV001195780 RCV002267738 RCV002289889 RCV002497243 RCV001101855 VAR_084917 rs146786552 |
1203 | G>E | ABCA4-Related Disorders Age related macular degeneration 2 Cone-rod dystrophy 3 Cone-rod dystrophy Retinitis pigmentosa 19 CORD3; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA16617205 rs1064793011 VAR_084918 RCV001101857 RCV000479551 RCV001073935 |
1203 | G>R | ABCA4-Related Disorders Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar Ensembl dbSNP UniProt |
|
CA227127 RCV000085587 COSM1667715 rs61750127 VAR_008441 |
1204 | D>N | breast STGD1; found in a patient with age-related macular degeneration; unknown pathological significance [Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000319010 RCV000282704 RCV000387472 RCV000176523 RCV001101854 RCV000372022 rs76258939 VAR_084919 RCV000132590 CA201962 |
1209 | M>T | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1570367398 RCV000994044 RCV001199612 |
1215 | H>missing | Cone-rod dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001858640 RCV000986363 rs1570367367 |
1222 | V>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000267412 rs762213896 RCV001196128 RCV000321298 RCV000361939 RCV001101853 CA957853 RCV000317911 RCV001859774 |
1224 | C>G | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Age related macular degeneration 2 Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000413110 rs1057517869 RCV001075421 CA16042373 COSM913451 |
1228 | E>* | Variant assessed as Somatic; impact. endometrium Retinal dystrophy [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV001858639 RCV000986362 CA341289365 rs1366653130 |
1233 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1383231039 RCV000761668 RCV001199613 CA341289337 |
1234 | P>L | Cone-rod dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001074757 CA227130 rs61752422 RCV000085589 |
1235 | N>D | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001244393 CA341289195 rs1570367230 RCV000986361 |
1243 | Y>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA227132 rs61750128 RCV000085590 VAR_012567 |
1250 | L>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
rs61752423 RCV001074194 RCV000085591 CA227133 |
1252 | E>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000593950 RCV001101852 rs377098736 CA957840 |
1252 | E>V | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001101851 RCV001075720 CA227135 rs61752424 RCV000085592 VAR_012568 RCV000408481 |
1253 | T>M | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy FFM; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000787497 rs1570367144 |
1257 | L>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61752425 RCV000408535 RCV000085593 CA227137 |
1270 | E>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000408497 CA10602434 rs886044738 |
1272 | I>T | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001198725 RCV001092801 rs746541266 CA957778 RCV000408545 |
1291 | Q>* | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs61752427 RCV001073602 RCV001727570 VAR_084920 RCV000085598 CA227145 |
1300 | R>missing | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000324092 VAR_012569 RCV000283155 RCV000377626 RCV000085599 RCV000342976 RCV000378686 RCV001099863 RCV000505027 CA227147 rs61750129 |
1300 | R>Q | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_084920 rs61752427 |
1300 | R>del | STGD1; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
|
RCV000327833 rs746468013 RCV000327729 RCV000272690 CA10611635 RCV000366202 RCV001099862 |
1316 | D>A | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA26855497 rs369361520 RCV001856353 RCV001099861 |
1324 | A>V | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs761989194 CA957754 RCV001298774 RCV001099860 RCV000275081 RCV000314854 RCV000367305 RCV000392774 |
1326 | A>G | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000085602 RCV001074147 rs61752428 CA227152 |
1332 | Q>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001336808 CA341287505 rs765176802 |
1332 | Q>H | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
| VAR_084921 | 1332 | Q>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001858638 rs1571265241 RCV000986359 |
1335 | P>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000986358 RCV001071876 rs61751401 |
1346 | T>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs754899711 CA957733 RCV001235117 RCV000787903 |
1357 | A>T | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1183074086 VAR_084922 CA341286798 |
1368 | R>C | Variant assessed as Somatic; 0.0 impact. CORD3; unknown pathological significance [NCI-TCGA, UniProt] | Yes |
ClinGen UniProt NCI-TCGA dbSNP gnomAD |
|
rs1571265125 RCV002549665 RCV000986357 |
1370 | H>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084923 | 1371 | K>N | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA16621568 rs1064797113 RCV001199614 RCV000488409 |
1376 | Q>H | Retinitis pigmentosa [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1327707460 RCV001075060 CA341286534 RCV001862591 |
1377 | I>V | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001315173 CA957702 RCV002543667 rs777063656 |
1378 | V>M | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000778258 CA129033 RCV000454310 RCV000023139 VAR_008443 RCV000008362 RCV000787498 rs61750130 RCV000078666 RCV001075868 RCV000763044 |
1380 | P>L | Mandibulofacial dysostosis with mental deficiency ABCA4-Related Disorders MACULAR DEGENERATION, AGE-RELATED, 2, SUSCEPTIBILITY TO Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1; also found in a patient with chorioretinal atrophy; reduced ATP-binding capacity; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085607 VAR_012570 rs61750131 CA227159 |
1388 | L>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs61752430 CA227160 RCV000085608 RCV001075006 |
1390 | L>P | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000778257 CA957690 RCV000408552 rs62642573 |
1399 | E>* | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_012571 COSM1344995 RCV000132591 CA227162 rs62642573 RCV000085609 |
1399 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine skin Severe early-childhood-onset retinal dystrophy STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; increases N-Ret-PE binding [NCI-TCGA, Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000085612 CA227165 rs61750133 VAR_008444 |
1406 | H>Y | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000787779 RCV001195988 rs1571264574 |
1408 | W>missing | Age related macular degeneration 2 Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227167 VAR_008445 rs61750134 RCV000085614 |
1408 | W>L | STGD1; does not affect secondary structure; decreases structural flexibility; significantly decreases all-trans-retinal binding [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
VAR_008446 RCV000210333 RCV000408501 rs61750135 RCV000085613 CA227166 |
1408 | W>R | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; reduced retinal-stimulated ATP hydrolysis [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
| VAR_084924 | 1408 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000408549 RCV003155072 RCV000085616 CA227169 RCV002490742 rs61750137 RCV001074847 |
1412 | Q>* | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA341286059 RCV000787499 rs1571264551 |
1415 | T>P | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_085015 | 1416 | F>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000358611 RCV000408394 RCV000345844 RCV001515591 RCV001098066 CA957663 RCV000306201 rs142673376 RCV000603618 RCV001074568 |
1419 | M>T | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA202170 VAR_008447 RCV000346856 RCV000085624 RCV000176915 RCV000294305 RCV000307168 RCV001098065 rs1800549 RCV000408392 |
1428 | T>M | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085625 CA227178 VAR_008448 rs61752432 |
1429 | V>A | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_012572 | 1430 | L>P | STGD1 [UniProt] | Yes | UniProt |
|
CA227181 VAR_008449 COSM1344994 RCV000085627 rs56357060 RCV000778256 RCV000408575 |
1433 | V>I | ABCA4-Related Disorders large_intestine Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002554678 RCV001073788 rs1283350532 CA341285769 |
1437 | K>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA26854468 RCV001075220 rs1046550021 RCV001862602 |
1438 | P>A | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs61750140 VAR_008450 CA227182 RCV001257845 RCV000085628 |
1439 | G>D | Autosomal recessive retinitis pigmentosa STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
VAR_008451 RCV000085630 CA227184 rs61750141 RCV000504867 |
1440 | F>S | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
VAR_012573 RCV000085629 CA227183 rs61752433 |
1440 | F>V | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs762150575 RCV000787780 VAR_084925 CA957653 RCV000480271 RCV001073593 |
1442 | N>K | Stargardt disease Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000085631 CA227185 RCV001073587 rs61750142 RCV000408447 VAR_012574 RCV000779005 RCV002247490 |
1443 | R>H | Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; loss of the majority of alpha-helical secondary structure; does not bind all-trans-retinal; does not affect conformational change [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1660166963 RCV001074820 |
1447 | E>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886044741 CA10602430 RCV000408520 |
1449 | W>C | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs886044742 CA10602429 RCV002519761 RCV000408486 |
1452 | E>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_084926 | 1453 | Y>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs758835368 RCV000505057 RCV001075739 RCV000443223 CA957621 RCV000779004 |
1455 | C>R | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA341285265 rs1347261858 RCV001352952 RCV001871907 |
1461 | W>C | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
| VAR_084927 | 1461 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs142732109 RCV002507145 RCV002249386 CA957608 RCV000658513 |
1473 | L>M | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085635 RCV001808324 VAR_084928 CA227190 rs61752434 |
1479 | W>missing | Severe early-childhood-onset retinal dystrophy STGD1 and CORD3; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
rs61752434 VAR_084928 |
1479 | W>del | STGD1 and CORD3; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
| VAR_084929 | 1484 | P>S | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001002829 RCV000408536 RCV001074852 RCV001198562 RCV002498456 RCV000085636 CA227192 VAR_008452 rs61750145 |
1486 | P>L | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV002470764 rs61750147 RCV002225081 VAR_012575 RCV000085639 CA227195 |
1488 | C>F | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000085637 rs61750146 RCV000408472 RCV000763043 VAR_008453 RCV001073630 CA227193 RCV001808325 |
1488 | C>R | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy Retinitis pigmentosa 19 STGD1 and FFM; also found in a patient with chorioretinal atrophy; reduced retinal-stimulated ATP hydrolysis; does not affect secondary structure; oss of structural flexibility; significantly decreases all-trans-retinal binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV000085638 VAR_012576 CA227194 RCV000408580 rs61750147 |
1488 | C>Y | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001074595 CA957599 RCV000961293 rs140952412 |
1489 | R>S | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs61750148 RCV001073829 |
1490 | C>G | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227198 RCV000085641 RCV000177442 RCV000787763 RCV000210300 RCV001542643 RCV000779003 VAR_008454 RCV002287365 rs61751402 |
1490 | C>Y | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa 19 STGD1 and CORD3; reduced retinal-stimulated ATP hydrolysis [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001074951 RCV001862585 rs1660137001 |
1502 | C>F | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084930 | 1503 | P>L | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001096337 RCV000351810 RCV000372633 rs190370456 COSM3934865 CA957595 RCV000294524 RCV000385412 |
1504 | E>K | Macular degeneration Variant assessed as Somatic; 0.0 impact. oesophagus ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA957590 RCV001380976 rs568792949 RCV001074181 RCV000408586 |
1507 | G>R | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
| VAR_012577 | 1508 | G>C | FFM [UniProt] | Yes | UniProt |
|
rs886046564 CA16617202 VAR_084931 RCV000483262 |
1511 | P>H | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
RCV000374011 CA10611712 RCV000321629 RCV000315841 RCV002520511 RCV001096335 rs886046564 RCV000263027 |
1511 | P>L | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA227203 RCV000085644 VAR_084932 rs61750150 |
1512 | P>R | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000678509 RCV001004999 RCV001074410 RCV000210298 RCV000504708 rs281865377 RCV000505070 RCV001074966 RCV000085645 RCV002267726 RCV001235213 RCV000504962 |
1513 | Q>missing | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinitis pigmentosa 19 Cone-rod dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000505160 RCV000085646 VAR_012578 CA227206 rs281865402 RCV001376334 |
1513 | Q>R | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
CA26846937 RCV001096334 rs1800550 |
1517 | R>C | Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000085652 VAR_008455 rs1800550 CA227212 |
1517 | R>S | ARMD2 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA341284696 rs1553188916 RCV000625606 RCV001860463 RCV002289913 |
1523 | Q>* | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs61750151 CA227217 VAR_012579 RCV000085655 |
1525 | L>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA227218 VAR_008456 RCV000210286 RCV001002827 RCV001075849 RCV000623715 RCV001542561 RCV000177509 RCV000085656 rs61750152 |
1526 | T>M | Variant assessed as Somatic; 0.0 impact. Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Stargardt disease Retinitis pigmentosa 19 Inborn genetic diseases Retinal dystrophy Retinitis pigmentosa 19 (rp19) STGD1; also found in a patient with chorioretinal atrophy; reduced retinal-stimulated ATP hydrolysis [NCI-TCGA, ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001535669 RCV001074286 RCV000177510 rs62642574 RCV001002826 VAR_008457 CA227219 RCV000085657 |
1532 | D>N | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1557770154 CA341284630 RCV001199616 RCV000761666 |
1533 | F>S | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001352951 rs1659998657 |
1537 | T>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_012580 CA227222 COSM913446 RCV000408504 RCV000085659 rs62642575 RCV001002608 |
1537 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium Severe early-childhood-onset retinal dystrophy STGD1; moderately decreased protein abundance; moderately decreased ATPase activity; moderately decreased phospholipid translocase activity [NCI-TCGA, Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1557770132 RCV000779002 RCV001385239 |
1541 | L>* | ABCA4-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001199617 rs1659954489 |
1545 | S>* | Cone dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886044745 RCV000408489 |
1547 | K>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_085016 | 1551 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001073458 rs1659953619 |
1552 | V>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341284162 RCV001220523 rs1385119665 RCV001075014 VAR_085017 |
1556 | R>T | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar dbSNP gnomAD UniProt |
|
rs1659914711 RCV001075794 |
1558 | G>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1659914654 RCV001073886 |
1559 | G>E | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341284056 RCV000787501 rs1571258567 |
1560 | I>N | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000407014 VAR_008458 RCV001005005 RCV000335992 CA227226 rs1762111 RCV000408556 RCV000787502 RCV000787778 RCV000314956 RCV000505175 RCV002509209 RCV000085664 |
1562 | I>T | Cone-rod dystrophy 3 (cord3) ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinitis Pigmentosa, Recessive Retinal dystrophy Cone-rod dystrophy STGD1, FFM, ARMD2 and CORD3; found in a patient with bull's eye maculopathy; unknown pathological significance [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001869182 CA957512 RCV000786954 rs377398404 |
1566 | L>F | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001073247 rs185093512 RCV002483586 RCV000591844 VAR_084934 CA957502 |
1572 | T>M | Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV002554693 RCV001074009 rs1340989734 |
1574 | E>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341283909 RCV002524408 rs1553188682 RCV000504799 |
1576 | L>R | Variant assessed as Somatic; impact. Severe early-childhood-onset retinal dystrophy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs771574413 CA957496 RCV002532641 RCV000596354 |
1577 | V>A | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000085667 VAR_008459 rs1800551 CA227230 |
1578 | G>R | ARMD2 [UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs1571258440 RCV000986356 |
1579 | F>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs777415466 RCV000408448 CA957495 RCV000761665 |
1580 | L>S | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000085669 RCV001376269 rs61750153 CA227233 |
1583 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV002505662 rs767980304 RCV001359813 RCV001073758 CA957489 |
1589 | V>M | Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000408525 RCV000285181 RCV000504993 rs113106943 RCV000376503 RCV000323858 CA233403 RCV000381856 RCV000416254 RCV001073617 VAR_084935 |
1591 | G>R | Macular degeneration Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Retinal dystrophy Stargardt Disease, Recessive Cone dystrophy STGD1; also found in a patient with macular dystrophy; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001091944 RCV001199619 rs1659902823 |
1596 | R>missing | Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074177 RCV001257846 RCV001002825 RCV000408465 RCV000085674 VAR_012581 rs61750155 RCV001808326 CA227239 |
1598 | A>D | Autosomal recessive retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Stargardt disease Retinitis pigmentosa 19 Retinal dystrophy CORD3 and STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
rs61752438 RCV000085676 RCV000999644 RCV001074975 |
1613 | D>missing | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341283565 rs1265079301 RCV000787503 RCV000787767 CA341283566 |
1614 | N>K | Stargardt disease [ClinVar] | Yes |
ClinGen TOPMed gnomAD ClinVar dbSNP |
|
RCV001324843 rs1659893621 RCV001074707 |
1617 | V>M | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000085678 CA227244 rs61752439 RCV001074325 |
1618 | W>* | Variant assessed as Somatic; 0.0 impact. Retinal dystrophy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001216794 RCV001074894 rs61752439 RCV001002824 CA957438 |
1618 | W>C | Stargardt disease Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA341283189 RCV000489654 RCV001353028 rs1085307968 |
1625 | H>Y | Retinitis pigmentosa 19 Retinitis pigmentosa 19 (rp19) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001232685 RCV001073887 rs763911476 |
1627 | L>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_008460 CA227250 RCV000085681 rs61750158 |
1631 | L>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs1571257937 RCV002267745 |
1632 | N>missing | Cone-rod dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074062 VAR_012582 CA227251 RCV001197832 RCV000085682 rs61754056 |
1637 | A>T | Age related macular degeneration 2 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
CA227254 RCV000321118 rs61751403 VAR_012583 RCV003223338 RCV000787505 RCV000504816 RCV000085684 |
1640 | R>Q | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1, FFM and CORD3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs61751404 CA227253 RCV000505114 RCV000787504 VAR_008461 RCV000210311 RCV002505017 RCV000408519 RCV000085683 |
1640 | R>W | Severe early-childhood-onset retinal dystrophy Leber congenital amaurosis Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1 and CORD3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000340669 rs114518437 RCV001075649 RCV000393458 RCV000486564 RCV000353628 RCV001101750 RCV000301076 CA957429 |
1642 | S>I | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs61753017 CA227255 RCV000986355 RCV000787506 RCV001075879 RCV001311640 RCV000085685 |
1642 | S>R | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa (rp) [ClinVar, Ensembl] | Yes |
ClinVar dbSNP ClinGen ExAC TOPMed gnomAD |
|
RCV000342279 RCV000283357 RCV000289750 RCV001101749 CA10611704 rs886046563 RCV000393464 RCV001812786 |
1649 | P>S | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
| VAR_084938 | 1650 | E>del | CORD3; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_008462 rs61750560 RCV000085687 CA227258 |
1652 | Y>D | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_084939 | 1652 | Y>del | STGD1 and FFM; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1659888526 RCV001352944 |
1653 | G>E | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001074175 rs758912686 |
1656 | V>F | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886044746 RCV000408473 CA10602425 RCV001002822 |
1660 | P>L | Severe early-childhood-onset retinal dystrophy Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA341282967 RCV001724300 RCV001379165 RCV001353015 rs1211325812 |
1660 | P>S | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Retinitis pigmentosa (rp) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1571257754 RCV000986354 |
1671 | I>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001101748 rs1659886244 |
1673 | V>A | ABCA4-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001075364 rs753489583 |
1676 | T>P | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001073450 CA957387 rs753489583 |
1676 | T>S | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
| VAR_012584 | 1681 | V>del | STGD1; highly reduced ATP-binding capacity [UniProt] | Yes | UniProt |
|
RCV000085693 RCV002498457 RCV001073680 RCV000986352 rs62646872 |
1682 | V>missing | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61753019 CA227268 COSM1344991 RCV001099771 RCV001073381 RCV000085694 RCV000986353 |
1686 | V>M | ABCA4-Related Disorders large_intestine Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001002821 rs1571256775 |
1687 | I>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
rs201996979 RCV001247223 CA957380 RCV001073357 |
1687 | I>F | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000085695 VAR_012585 CA227270 rs61753020 RCV000408570 |
1689 | S>P | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC dbSNP gnomAD |
|
RCV000085696 RCV002470765 rs61750563 RCV001073371 VAR_012586 CA227271 RCV002255285 |
1693 | V>I | Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1659843027 RCV001075214 |
1694 | P>T | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_008463 rs61750564 RCV000408469 RCV002490743 CA227272 RCV000085697 |
1696 | S>N | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 STGD1; unknown pathological significance; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; increases N-Ret-PE binding [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000504832 rs1435203678 CA341282739 |
1696 | S>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
VAR_085018 RCV000085698 rs61750565 CA227273 |
1703 | Q>E | STGD1; unknown pathological significance; does not affect solubility; does not affect location in cytoplasmic vesicle;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_008464 | 1703 | Q>K | STGD1; moderately decreases solubility; loss of cytoplasmic vesicle localization;decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity [UniProt] | Yes | UniProt |
|
RCV000085699 RCV000408542 CA227275 rs61753021 VAR_012587 |
1705 | R>L | Severe early-childhood-onset retinal dystrophy STGD1; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_085019 CA957375 rs61753021 |
1705 | R>Q | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000994038 RCV002267624 rs771038310 CA957376 RCV000779001 RCV001199620 COSM1344990 RCV001074860 |
1705 | R>W | ABCA4-Related Disorders large_intestine Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy Retinal dystrophy [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
CA10610445 RCV000329287 RCV001230666 RCV000387503 RCV000381826 RCV000290726 rs886046562 RCV001099769 |
1707 | N>K | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000408584 RCV001854785 rs374343397 CA957371 |
1713 | Q>K | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001269029 rs1659840790 RCV001577463 RCV001073820 |
1713 | Q>R | Cone-rod dystrophy 3 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000408474 rs886044732 CA10602424 |
1718 | V>G | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs61750566 RCV001073781 RCV000085702 RCV000301420 |
1721 | T>missing | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001002820 CA341282564 rs1437993640 RCV001388592 |
1723 | Y>* | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000785053 RCV001204682 rs1557767754 CA341282557 RCV001353013 |
1724 | W>* | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1557767754 VAR_067428 RCV001862516 RCV001073715 |
1724 | W>C | Retinal dystrophy ARMD2 [ClinVar, UniProt] | Yes |
ClinVar dbSNP UniProt |
| VAR_084940 | 1724 | W>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV001196665 rs1057518955 RCV000414893 RCV001268822 RCV001074613 |
1726 | T>missing | Age related macular degeneration 2 Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_008465 rs61750567 RCV001074107 CA227279 RCV000085703 |
1729 | L>P | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
CA10602423 rs886044747 RCV001075418 RCV000408479 RCV001002819 |
1730 | W>* | Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001367092 rs765563320 VAR_012588 RCV001199634 CA957346 |
1733 | M>T | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1659721337 RCV001075413 |
1735 | Y>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227286 rs61750568 RCV000085710 VAR_012589 |
1736 | S>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001074353 RCV000085712 rs61750569 |
1741 | L>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61753025 RCV000085714 VAR_012590 CA227290 |
1748 | G>R | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
| VAR_084941 | 1754 | Y>D | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA957331 RCV001228065 RCV002563129 rs779399010 |
1758 | E>G | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA16603704 RCV001073276 RCV000430778 rs1057520212 |
1761 | P>R | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1454355504 RCV001099766 |
1761 | P>T | ABCA4-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_012591 | 1761 | P>del | STGD1; highly reduced ATP-binding capacity [UniProt] | Yes | UniProt |
|
RCV000008368 CA119142 RCV000008367 VAR_084942 rs121909206 |
1762 | A>D | Cone-rod dystrophy 3 (cord3) Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 STGD1; unknown pathological significance [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
RCV000085718 rs61753028 VAR_012592 CA227295 RCV000408587 |
1763 | L>P | Severe early-childhood-onset retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001074718 RCV000593363 rs1553188071 |
1764 | V>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341281554 rs1195430987 RCV001308734 RCV001074557 |
1770 | Y>D | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA26842500 RCV001353043 RCV001366508 rs374015407 |
1771 | G>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
CA957303 RCV000505104 rs776757706 |
1772 | W>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA227298 rs61750571 RCV001074187 RCV001723668 RCV001352958 RCV000787509 RCV000085721 |
1772 | W>* | Retinitis pigmentosa Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy Retinitis pigmentosa (rp) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000826133 RCV002485455 RCV001074401 VAR_084944 RCV000441041 CA957302 COSM1580382 RCV000408555 rs760549861 |
1773 | A>V | Variant assessed as Somatic; 0.0 impact. Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease haematopoietic_and_lymphoid_tissue Retinal dystrophy STGD1; unknown pathological significance; severely decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity [NCI-TCGA, ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_085020 rs771742619 CA957300 RCV001344272 |
1775 | I>N | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1553187939 CA341281507 RCV000497807 VAR_012593 |
1776 | P>L | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001450679 RCV001199622 rs375184282 RCV001352943 CA957299 |
1777 | M>L | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1571253050 RCV001002816 |
1778 | M>missing | Retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
rs748706582 CA10588919 RCV001859496 RCV000256375 |
1778 | M>K | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000085723 RCV001074056 CA227301 RCV000085724 CA227303 rs61750573 |
1779 | Y>* | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes dbSNP gnomAD |
| VAR_085022 | 1779 | Y>H | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_085021 | 1779 | Y>del | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000778999 RCV000994036 RCV000008373 rs121909207 RCV001073346 CA340713 VAR_012594 |
1780 | P>A | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
CA957294 RCV001002815 rs746252741 |
1784 | L>R | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA10602419 RCV000408463 rs886044751 |
1788 | P>L | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1659672463 RCV001352984 |
1793 | V>M | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000408516 RCV000504739 RCV000085725 RCV000677343 VAR_008466 CA227304 rs61751406 |
1794 | A>D | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; also found in a patient with bull's eye maculopathy; unknown pathological significance; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; severely decreases N-Ret-PE-stimulated ATPase activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001035476 CA341281397 VAR_085023 rs1571252997 RCV001002814 |
1794 | A>P | Stargardt disease STGD1; unknown pathological significance; loss of cytoplasmic vesicle localization; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase; decreases solubility below 50%; significantly reduces N-Ret-PE binding in the absence of ATP [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV002479263 rs1188515677 RCV001270350 CA341281392 RCV001040976 |
1795 | L>V | Retinitis pigmentosa Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001257847 rs786205445 RCV000171154 |
1797 | C>* | Autosomal recessive retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_012595 RCV001075012 RCV000085726 rs61750574 CA227305 |
1799 | N>D | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_012596 rs61753029 CA227306 RCV001352967 RCV000085727 RCV001199290 RCV001074166 |
1805 | N>D | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs1659670972 RCV001074773 |
1806 | S>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227307 rs62646875 VAR_008467 RCV000085728 |
1820 | R>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
CA341281191 rs1326929680 RCV001097979 |
1824 | R>T | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA957240 rs530098237 RCV003160620 RCV001097978 |
1827 | A>T | ABCA4-Related Disorders Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000085734 RCV000786006 CA227313 rs62642562 RCV000408577 VAR_085024 |
1838 | H>D | Severe early-childhood-onset retinal dystrophy Stargardt disease STGD1; unknown pathological significance; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; decreases modestly N-Ret-PE-stimulated ATPase [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
VAR_084945 rs62642562 CA10602418 RCV000408514 |
1838 | H>N | Severe early-childhood-onset retinal dystrophy STGD1; unknown pathological significance; does not affect solubility; does not affect location in cytoplasmic vesicle; decreases basal ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
rs886044752 RCV001854787 CA10602417 RCV000408470 |
1838 | H>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA227315 RCV001075475 rs62642562 VAR_008468 RCV000085735 |
1838 | H>Y | Retinal dystrophy STGD1; moderately decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; severely decreases N-Ret-PE-stimulated ATPase activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
rs1297857869 CA341281100 RCV000505135 |
1839 | F>S | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs946348819 RCV001862588 RCV001075020 |
1840 | C>S | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_008469 RCV000085736 CA227316 rs62642576 |
1843 | R>W | Variant assessed as Somatic; 0.0 impact. STGD1; does not affect solubility; does not affect location in cytoplasmic vesicle; decreases ATPase activity between 50% and 80%; decreases modestly N-Ret-PE-stimulated ATPase; does not affect N-Ret-PE binding [NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt ESP NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1571250020 RCV000787511 |
1843 | R>missing | Cone-rod dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001097977 rs1659540392 |
1845 | L>F | ABCA4-Related Disorders [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61750575 RCV000085737 RCV003152681 VAR_008494 CA227317 |
1846 | I>T | Cone-rod dystrophy 3 STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs377311148 CA244968 RCV000296428 RCV000790718 |
1850 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA10602416 RCV000408565 rs886044753 |
1853 | A>D | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001199623 rs374687000 RCV001075607 CA957223 RCV000585492 |
1854 | V>L | Retinal dystrophy Cone-rod dystrophy [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs371489809 RCV002289547 CA957222 RCV002480281 RCV000421632 |
1858 | Y>N | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001074087 rs1659538743 |
1861 | F>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001075630 rs1659538637 RCV001564605 |
1862 | G>S | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA957198 rs201707267 RCV001097976 RCV001480493 |
1865 | H>Y | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1801466 CA202869 RCV000178424 RCV001197336 RCV000348932 RCV000293913 VAR_008470 RCV001723669 RCV001262623 RCV001002812 RCV001352969 RCV000391356 RCV001352965 RCV001353019 RCV000309306 RCV001097975 RCV001352973 RCV001353024 RCV000085744 RCV000721173 |
1868 | N>I | Macular degeneration Retinitis pigmentosa ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive Retinitis pigmentosa (rp) STGD1; slightly reduced retinal-stimulated ATP hydrolysis; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; does not affect N-Ret-PE binding [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000408480 RCV001323218 CA957194 rs376925793 |
1869 | P>L | Variant assessed as Somatic; 0.0 impact. Severe early-childhood-onset retinal dystrophy [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000388273 RCV000373095 CA10611624 RCV000278480 rs886046560 RCV001097974 RCV000352195 |
1870 | F>L | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001097973 CA957187 RCV001511155 rs374811709 |
1880 | F>L | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
rs369973540 RCV001257849 |
1881 | A>G | Autosomal recessive retinitis pigmentosa [ClinVar] | Yes |
ClinVar dbSNP |
|
CA957186 rs369973540 RCV002471022 RCV001096234 RCV001058803 |
1881 | A>V | ABCA4-Related Disorders Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000431853 CA957183 VAR_084946 CA957184 rs752160946 |
1882 | M>I | CORD3; unknown pathological significance [UniProt] | Yes |
ClinGen ExAC TOPMed gnomAD ClinVar UniProt dbSNP |
|
CA957185 RCV001198724 rs780817685 |
1882 | M>T | Age related macular degeneration 2 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs62642578 CA227327 VAR_012598 RCV000085746 |
1884 | V>E | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs62642563 CA227328 VAR_012599 RCV000085747 |
1885 | E>K | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs62642579 CA227329 VAR_008471 RCV001075174 RCV000085748 |
1886 | G>E | Retinal dystrophy STGD1; highly reduced ATP-binding capacity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000408529 rs886044754 CA10602415 |
1886 | G>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001055571 RCV002249662 rs1659524475 |
1887 | V>missing | Age related macular degeneration 2 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61750635 RCV000085749 VAR_008472 |
1890 | F>missing | STGD1 [UniProt] | Yes |
ClinVar UniProt dbSNP |
|
rs61750635 VAR_008472 |
1890 | F>del | STGD1 [UniProt] | Yes |
UniProt dbSNP |
|
VAR_012600 CA227332 RCV000085751 rs61750636 |
1896 | V>D | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC dbSNP gnomAD |
|
rs1659522195 RCV001353046 |
1897 | Q>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001296443 RCV001352990 rs771092150 |
1897 | Q>H | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001075015 CA227333 RCV000085752 RCV002470766 RCV001196150 RCV000408593 RCV001002804 rs1800552 VAR_008473 RCV000787764 RCV000623966 RCV000778998 RCV000787513 |
1898 | R>H | Retinitis pigmentosa ABCA4-Related Disorders Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy Inborn genetic diseases Retinitis pigmentosa (rp) STGD1 and ARMD2; does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity; Increases N-Ret-PE binding [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1659472146 RCV001073351 |
1907 | A>F | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001096231 rs1394332810 CA341280488 |
1913 | P>T | ABCA4-Related Disorders [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1659469884 RCV001353012 |
1921 | V>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084947 | 1921 | V>G | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs61753032 RCV000085760 VAR_012601 CA227341 |
1921 | V>M | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs757449019 RCV001075543 CA957122 |
1925 | R>G | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA341280337 RCV001199625 rs1208195953 RCV000994034 |
1925 | R>I | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA26837296 rs757462382 RCV001075443 |
1931 | G>S | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000008370 RCV000008372 RCV000008371 VAR_012602 rs61753033 CA119145 RCV000085762 |
1940 | L>P | Cone-rod dystrophy 3 (cord3) Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease STGD1 and FFM [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001002811 RCV002549192 RCV001073274 rs1161119501 CA341280140 |
1941 | H>P | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
VAR_085026 CA957117 RCV001862615 RCV001075476 rs760353830 |
1942 | E>Q | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001308733 CA10602414 RCV000408589 rs886044755 |
1943 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000085768 rs56142141 RCV000339604 RCV001096228 RCV000379050 RCV001195781 VAR_008474 RCV000211880 RCV000375640 CA285822 RCV000284620 |
1948 | P>L | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Age related macular degeneration 2 Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1659452428 RCV001073375 |
1949 | G>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000505149 RCV002247269 VAR_008475 RCV000008341 RCV000078670 RCV001731281 RCV000624210 RCV000678513 RCV001807001 RCV000787514 CA119132 RCV001542557 RCV001254602 RCV000504952 rs1800553 RCV000273328 RCV000786006 RCV001258239 RCV000008339 RCV000008340 |
1961 | G>E | Retinitis pigmentosa MACULAR DEGENERATION, AGE-RELATED, 2, SUSCEPTIBILITY TO Cone-rod dystrophy 3 Inborn genetic diseases Retinitis pigmentosa (rp) Cone-rod dystrophy 3 (cord3) ABCA4-Related Disorders Joubert syndrome 5 (jbts5) Age related macular degeneration 2 Joubert syndrome 5 Severe early-childhood-onset retinal dystrophy Stargardt disease Cone-rod dystrophy Retinitis pigmentosa 19 Retinal dystrophy STGD1, FFM and CORD3; also found patients with cone dystrophy and with macular dystrophy; frequent mutation; may be associated with ARMD2; inhibition of ATP hydrolysis by retinal [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001229952 CA957094 rs142253670 RCV000778996 RCV000408510 VAR_084948 |
1961 | G>R | Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy STGD1; unknown pathological significance [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs28938473 RCV000259062 VAR_008476 CA119133 RCV000008346 RCV000778995 RCV001073250 RCV000085773 RCV000408598 RCV000787515 |
1970 | L>F | ABCA4-Related Disorders Severe early-childhood-onset retinal dystrophy Stargardt disease Retinal dystrophy ARMD2, FFM and STGD1; also found in a patient with cone dystrophy [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000408495 rs886044756 CA10602413 |
1970 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs61753034 VAR_012603 CA119134 RCV000085774 RCV000008347 |
1971 | L>R | Stargardt disease FFM; highly reduced ATP-binding capacity; abolishes basal and retinal-stimulated ATP hydrolysis [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs1659430629 RCV001199626 |
1971 | L>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001073313 rs1659430143 |
1972 | G>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000504777 RCV001807040 RCV001002810 rs61751389 RCV001257850 RCV001542556 RCV000678514 RCV000085776 RCV000408561 |
1972 | G>* | Autosomal recessive retinitis pigmentosa Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Retinal dystrophy Cone-rod dystrophy Retinitis pigmentosa 19 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs61753036 CA227356 RCV000085777 VAR_012604 |
1975 | G>R | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs1659429594 RCV001353016 |
1975 | G>V | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001075660 rs61750639 |
1977 | G>R | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000085778 RCV001075771 CA227357 rs61750639 VAR_008477 RCV001002809 |
1977 | G>S | Retinitis pigmentosa Retinal dystrophy STGD1 and ARMD2; highly reduced ATP-binding capacity; inhibition of ATP hydrolysis by retinal [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV000486602 rs1064793014 RCV000504970 CA16617200 RCV002248696 RCV002250633 |
1978 | K>E | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA341279617 RCV001073524 rs1571247308 RCV000994033 |
1979 | T>A | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA227358 RCV000408461 RCV000085779 rs61753037 |
1979 | T>I | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001197194 CA10602412 RCV000408493 rs752147871 |
1981 | T>R | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA341279552 rs1259778135 RCV001209734 RCV001074320 |
1984 | M>R | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001101665 RCV000313207 CA10611697 RCV000367905 RCV000371279 RCV000276774 rs886046559 |
1985 | L>F | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1659427600 RCV001242691 RCV002504344 |
1986 | T>* | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA957058 RCV002546973 rs777300047 RCV001342849 |
1987 | G>R | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1659426620 RCV001196636 |
1993 | S>missing | Age related macular degeneration 2 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001036259 CA957054 rs147870733 RCV001074223 COSM1238087 |
1998 | V>I | oesophagus Retinal dystrophy [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000986348 CA341279239 rs1170554250 |
2003 | I>F | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000591450 rs201883531 RCV002532642 CA26835484 |
2014 | M>V | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_084949 | 2017 | C>Y | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_084950 rs150633517 CA957033 RCV001323217 |
2023 | I>T | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001002808 rs1571245809 |
2026 | L>missing | Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000480932 CA10602410 rs886044758 RCV000763439 RCV000408446 |
2026 | L>P | Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001074885 VAR_008478 RCV002247268 CA119129 RCV000085785 RCV000008333 RCV000008332 RCV000763438 RCV000826132 rs61751408 |
2027 | L>F | Cone-rod dystrophy 3 (cord3) Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1 and FFM; also found in a patient with chorioretinal atrophy; highly reduced ATP-binding capacity [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_008480 RCV000178545 RCV000787516 RCV001074874 CA227366 RCV000085787 RCV000763436 RCV001002805 RCV000787517 RCV001197157 rs61750641 RCV000408532 RCV000787766 |
2030 | R>Q | Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Progressive cone dystrophy (without rod involvement) Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1 and FFM [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000763437 RCV000505162 RCV001542555 RCV000008365 RCV000787773 RCV000504794 COSM2260581 CA119140 VAR_084951 rs61751383 RCV002512903 RCV000085786 |
2030 | R>missing | Variant assessed as Somatic; 0.0 impact. large_intestine Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy, early-onset severe STGD1 and CORD3; unknown pathological significance Retinitis pigmentosa 19 Retinal dystrophy ABCA4 retinoapthy [NCI-TCGA, Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs61751383 VAR_084951 |
2030 | R>del | STGD1 and CORD3; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
|
rs1659353934 RCV002557915 RCV001074609 |
2031 | E>K | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA341279008 RCV001075791 VAR_084952 rs1242866408 RCV001235229 |
2032 | H>R | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV001074505 rs183398940 RCV001366334 CA26835427 |
2032 | H>Y | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000504985 CA341278997 rs1553186896 |
2033 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA341278996 RCV000504619 RCV000787518 VAR_084953 rs1553186896 |
2033 | L>R | Stargardt disease Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_012605 RCV000085788 rs61750642 CA227367 |
2035 | L>P | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA10581649 RCV000225521 rs878853398 |
2036 | Y>C | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1659353253 RCV001075215 |
2037 | A>V | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs767729255 CA341278940 RCV001029767 |
2038 | R>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002250614 rs767729255 CA957026 RCV000291561 |
2038 | R>Q | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA227368 VAR_008495 rs61750643 RCV001073850 RCV000408458 RCV000085789 |
2038 | R>W | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1; highly reduced ATP-binding capacity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA227369 VAR_084954 RCV001073783 RCV000085790 RCV000787772 RCV000763435 RCV002283455 rs61753038 |
2040 | R>missing | STGD1; found in a patient with chorioretinal atrophy; unknown pathological significance Variant assessed as Somatic; 0.0 impact. Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy [UniProt, NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA232815 rs148460146 COSM913442 RCV000986347 RCV001073482 RCV000132592 VAR_084955 RCV001542554 |
2040 | R>Q | endometrium Severe early-childhood-onset retinal dystrophy Retinal dystrophy Retinitis pigmentosa 19 STGD1; unknown pathological significance [Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_084954 rs61753038 |
2040 | R>del | STGD1; found in a patient with chorioretinal atrophy; unknown pathological significance [UniProt] | Yes |
UniProt dbSNP |
|
rs1462350577 RCV002548492 RCV001352992 CA341278911 |
2041 | G>D | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
| VAR_084956 | 2042 | V>G | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_084957 rs763230559 CA341278891 |
2043 | P>S | CORD3; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_067429 | 2047 | I>N | ARMD2 [UniProt] | Yes | UniProt |
|
RCV001250529 RCV001174687 rs1659351261 |
2049 | K>missing | Severe early-childhood-onset retinal dystrophy Stargardt disease [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000408516 RCV000285333 RCV000259072 rs41292677 RCV000504806 RCV001075661 RCV000008335 CA220688 RCV000778139 RCV000787769 RCV002470704 RCV000393726 RCV000340261 VAR_008481 RCV000393715 RCV000078671 |
2050 | V>L | Macular degeneration Retinitis pigmentosa ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Stargardt disease Retinitis Pigmentosa, Recessive Retinal dystrophy Cone dystrophy Stargardt Disease, Recessive Retinitis pigmentosa (rp) STGD1 and CORD3; may act as a modifier of macular dystrophy in patients who also have a Trp-172 mutation in PRPH2 [ClinVar, Ensembl, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085791 RCV001075765 CA227371 RCV001266587 rs61750644 |
2056 | K>* | Inborn genetic diseases Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV002490744 VAR_012607 RCV000085792 CA227373 rs61753039 |
2060 | L>R | Cone-rod dystrophy 3 CORD3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs61753040 CA956992 VAR_084958 |
2064 | A>T | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
rs1362964563 RCV001073480 CA341278309 |
2064 | A>V | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002554772 RCV001075768 rs1659197672 |
2070 | T>Q | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs62642580 RCV001074168 |
2071 | Y>* | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_012608 | 2071 | Y>F | STGD1 [UniProt] | Yes | UniProt |
|
RCV000986346 rs1571243037 |
2074 | G>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001262439 RCV001234782 VAR_085028 RCV002051899 RCV000850519 rs367839100 RCV001074418 CA956985 |
2074 | G>V | Cone-rod dystrophy 3 (cord3) Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Retinal dystrophy STGD1; unknown pathological significance [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC dbSNP gnomAD |
|
rs1553186509 RCV000504998 CA341278240 |
2076 | K>E | Congenital stationary night blindness [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001074057 VAR_012609 CA227379 RCV000085796 rs61750645 |
2077 | R>G | Cone-rod dystrophy 3 (cord3) Retinal dystrophy STGD1 [Ensembl, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000408478 CA10602409 RCV002516246 rs886044759 |
2077 | R>Q | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA227380 VAR_008482 RCV001770079 rs61750645 RCV001004998 RCV000085797 RCV000504630 RCV000787519 RCV000402409 |
2077 | R>W | Cone-rod dystrophy 3 (cord3) Variant assessed as Somatic; 0.0 impact. Age related macular degeneration 2 Severe early-childhood-onset retinal dystrophy Cone-rod dystrophy 3 Stargardt disease Retinal dystrophy STGD1; highly reduced ATP-binding capacity; decreases solubility at 50 %; loss of intracellular vesicle localization; drastically reduced basal activity with little or no substrate stimulation [Ensembl, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_084959 | 2078 | K>E | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000658512 rs951379922 CA26832584 RCV000787011 |
2078 | K>Q | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000085798 rs281865382 RCV001073616 RCV000986345 |
2080 | S>missing | Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1250914690 RCV001061360 RCV001074596 CA341278195 COSM215778 |
2084 | A>T | Variant assessed as Somatic; 0.0 impact. central_nervous_system Retinal dystrophy [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000085804 rs61750646 CA227386 VAR_008483 |
2096 | E>K | Variant assessed as Somatic; 0.0 impact. STGD1; inhibition of ATP hydrolysis by retinal [NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_084960 rs1166357291 CA341277622 |
2097 | P>S | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP |
|
rs61750648 RCV000085806 RCV000408484 CA227388 RCV001075529 VAR_008484 |
2106 | R>C | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 and FFM; reduced ATP-binding capacity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1057520213 RCV000432926 RCV001074499 CA16044110 |
2106 | R>H | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
VAR_012610 RCV001380601 CA956906 rs2297669 RCV001074913 RCV000787520 |
2107 | R>C | Variant assessed as Somatic; 0.0 impact. Stargardt disease Retinal dystrophy STGD1; found in a patient with bull's eye maculopathy; unknown pathological significance [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000291062 RCV000408534 RCV000505080 CA227389 rs62642564 COSM913440 RCV000391457 VAR_008485 RCV001099680 RCV000085807 RCV000345905 RCV001074412 RCV001352953 RCV000391460 |
2107 | R>H | Macular degeneration ABCA4-Related Disorders large_intestine endometrium Cone-Rod Dystrophy, Recessive Severe early-childhood-onset retinal dystrophy Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive Retinal dystrophy STGD1 and CORD3; may predispose to develop retinal toxicity after treatment with chloroquine and hydroxychloroquine [ClinVar, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001352983 rs1659159979 |
2108 | M>RH | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886044761 RCV001055307 CA10602407 RCV000408599 |
2109 | L>P | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs62642565 RCV000504640 CA227392 RCV000085809 |
2110 | W>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001349297 RCV002547491 rs571031879 CA956902 |
2112 | V>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA956899 rs202127235 RCV001099679 RCV000389153 RCV001424033 RCV000349548 RCV000294673 RCV000315923 COSM913439 |
2114 | V>M | Macular degeneration ABCA4-Related Disorders large_intestine endometrium Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001075347 CA341277438 rs1303289867 RCV001322658 |
2127 | S>F | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
VAR_008486 rs61750651 RCV000085815 CA227399 |
2128 | H>R | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
rs1571242070 RCV002249614 RCV002267744 RCV001321279 CA341277427 |
2129 | S>N | Age related macular degeneration 2 Cone-rod dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs61750652 RCV000085817 RCV001074273 VAR_008487 CA227401 |
2131 | E>K | Retinal dystrophy STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
| VAR_067430 | 2137 | C>Y | ARMD2 [UniProt] | Yes | UniProt |
|
RCV000319805 CA10611614 RCV001099678 RCV000280073 RCV001380600 RCV000264727 RCV000374572 rs761867791 |
2139 | R>P | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs61750653 CA227402 VAR_008488 RCV000085818 |
2139 | R>W | Variant assessed as Somatic; 0.0 impact. STGD1 [NCI-TCGA, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
VAR_084961 rs774475956 CA956877 |
2140 | L>Q | STGD1; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
rs1659153516 RCV001353009 |
2143 | M>K | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA227403 RCV000085819 rs61753044 VAR_012611 |
2146 | G>D | CORD3 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
COSM198602 rs966835207 RCV002556017 RCV001099677 CA26831527 |
2147 | A>T | Variant assessed as Somatic; 0.0 impact. ABCA4-Related Disorders large_intestine [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
rs61750654 RCV000505094 RCV000414922 RCV000085820 CA227404 COSM1688047 RCV000132593 |
2149 | R>* | Macular degeneration Variant assessed as Somatic; 0.0 impact. large_intestine skin Severe early-childhood-onset retinal dystrophy Retinal dystrophy [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs61750655 VAR_012612 RCV000085821 CA227406 |
2149 | R>L | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA227407 VAR_012613 rs61750656 RCV000085822 |
2150 | C>R | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP |
|
RCV000408531 RCV000085823 VAR_008489 RCV001074378 rs61751384 CA227408 |
2150 | C>Y | Severe early-childhood-onset retinal dystrophy Retinal dystrophy STGD1 and CORD3 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001196664 rs1057518954 RCV001075340 RCV000415368 CA16043371 |
2151 | M>I | Age related macular degeneration 2 Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA341277276 rs1571241947 RCV000787523 |
2152 | G>C | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001075341 rs1659152504 |
2152 | G>V | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1373168392 RCV001858637 RCV000986344 |
2158 | K>missing | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1571241930 RCV000787524 CA341277220 |
2160 | K>E | Stargardt disease [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs281865405 CA227409 VAR_008490 RCV000085824 |
2160 | K>R | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001073382 CA26829093 rs940867738 RCV001862498 |
2165 | Y>C | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1659061509 RCV001074316 |
2171 | I>missing | Retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
CA10602406 rs886044762 RCV001854788 RCV000408595 |
2172 | K>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001099675 RCV000268191 RCV000085827 rs1800555 RCV000008336 RCV000362825 RCV000323169 VAR_008491 CA119130 RCV000359301 RCV000243384 |
2177 | D>N | Macular degeneration ABCA4-Related Disorders MACULAR DEGENERATION, AGE-RELATED, 2, SUSCEPTIBILITY TO Cone-Rod Dystrophy, Recessive Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive CORD3, ARMD2 and STGD1; unknown pathological significance; increased retinal-stimulated ATP hydrolysis [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000085829 RCV001002806 rs61750658 VAR_084962 CA227415 |
2188 | F>S | Stargardt disease STGD1; unknown pathological significance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000085834 CA227422 rs61753045 RCV000408488 |
2203 | Y>* | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA10602405 RCV000408559 RCV001378637 VAR_012614 rs886044763 |
2216 | A>V | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
RCV000408450 RCV001352970 CA227425 RCV000085837 RCV000504742 rs61753046 |
2220 | Q>* | Severe early-childhood-onset retinal dystrophy Retinitis pigmentosa 19 Cone dystrophy Retinitis pigmentosa 19 (rp19) [ClinVar, Ensembl] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
| VAR_084963 | 2221 | L>P | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs61750659 CA227432 VAR_012615 RCV000085842 RCV001075761 |
2229 | L>P | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
| VAR_084964 | 2237 | T>P | STGD1; unknown pathological significance [UniProt] | Yes | UniProt |
|
RCV000408503 rs886044764 CA10602404 |
2238 | Q>R | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001073878 rs779585931 CA956820 RCV001371824 |
2240 | T>A | Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA227439 rs61748521 RCV000085848 VAR_012616 RCV001075235 |
2241 | L>V | Retinal dystrophy STGD1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001353004 rs1658995249 |
2244 | V>E | Severe early-childhood-onset retinal dystrophy [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002505018 RCV000336644 RCV000178683 CA202970 RCV000340209 RCV000376116 VAR_009157 RCV000281600 RCV000085855 rs6666652 RCV001097882 |
2255 | S>I | Macular degeneration ABCA4-Related Disorders Cone-Rod Dystrophy, Recessive Cone-rod dystrophy 3 Retinitis Pigmentosa, Recessive Stargardt Disease, Recessive benign variant [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA227444 RCV000085856 VAR_012617 rs281865407 |
2263 | R>L | STGD1 [UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001856321 RCV001097881 RCV002489742 CA956787 rs372234578 |
2269 | R>* | ABCA4-Related Disorders Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001097880 rs202223056 RCV001366536 RCV001073721 CA956786 |
2269 | R>Q | ABCA4-Related Disorders Retinal dystrophy [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1658918432 RCV001269028 |
2274 | D>R | Cone-rod dystrophy 3 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000316791 rs886041554 |
1 | M>I | No |
ClinVar dbSNP |
|
|
rs764311517 COSM913477 CA958980 |
2 | G>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA958981 rs751669641 |
2 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA341289001 rs1439937348 |
3 | F>S | No |
ClinGen gnomAD |
|
|
rs369852553 CA26845241 |
4 | V>M | No |
ClinGen ESP TOPMed |
|
|
rs1028516438 CA26845240 |
6 | Q>E | No |
ClinGen TOPMed |
|
|
CA958979 rs754924450 |
7 | I>L | No |
ClinGen ExAC TOPMed |
|
|
CA341288892 rs1308464856 |
7 | I>M | No |
ClinGen gnomAD |
|
|
rs376675803 CA958978 |
8 | Q>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1131691262 RCV000494201 CA341288694 |
13 | K>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA958977 rs371304323 |
13 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs62645956 RCV000085600 |
13 | K>missing | No |
ClinVar dbSNP |
|
|
CA958975 rs767182574 |
16 | T>A | No |
ClinGen ExAC gnomAD |
|
|
RCV001347841 CA26845223 rs949028237 |
16 | T>I | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1322362097 CA341288613 |
17 | L>P | No |
ClinGen gnomAD |
|
|
CA26845219 rs868543294 |
18 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs746232022 CA958969 |
21 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs201387193 CA26842873 |
23 | I>N | No |
ClinGen 1000Genomes |
|
|
rs756045993 CA958942 |
23 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs62645942 RCV001062719 |
24 | R>G | No |
ClinVar dbSNP |
|
|
CA958941 rs757050873 |
25 | F>S | No |
ClinGen ExAC |
|
|
CA958939 rs763727710 |
27 | V>M | No |
ClinGen ExAC |
|
|
rs146663678 CA958938 |
29 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA958936 RCV000585071 rs202127496 |
30 | V>M | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA341286761 rs1193865484 |
31 | W>R | No |
ClinGen TOPMed |
|
|
CA341286731 rs1428504985 |
32 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs760036995 CA958935 |
32 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1447289166 CA341286724 |
33 | L>* | No |
ClinGen TOPMed |
|
|
rs771350693 CA958932 |
38 | V>L | No |
ClinGen ExAC gnomAD |
|
|
RCV001051277 rs761112891 |
40 | I>F | No |
ClinVar dbSNP |
|
|
CA341286599 rs1404664758 |
40 | I>M | No |
ClinGen TOPMed |
|
|
rs772400085 CA958929 |
40 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA958930 rs772400085 |
40 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA958931 rs761112891 |
40 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs748357067 CA958928 RCV000596465 RCV001000881 |
41 | W>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs368503198 CA958927 |
45 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001341271 rs368503198 |
45 | A>V | No |
ClinVar dbSNP |
|
|
rs4847281 RCV000085396 |
47 | P>= | No |
ClinVar dbSNP |
|
|
CA341286481 rs143207212 |
47 | P>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1570434341 CA341286453 |
48 | L>P | No |
ClinGen Ensembl |
|
|
rs1252712183 CA341286414 |
50 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs941059389 CA26842836 RCV001036847 |
52 | H>D | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA341286332 rs764744217 |
53 | E>* | No |
ClinGen ExAC gnomAD |
|
|
RCV001325383 rs1662652110 |
53 | E>V | No |
ClinVar dbSNP |
|
|
rs749959652 CA26842495 |
55 | H>Y | No |
ClinGen Ensembl |
|
|
rs747766711 CA958903 |
56 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs778422185 CA958902 |
57 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs754713440 CA958901 |
57 | P>L | No |
ClinGen ExAC gnomAD |
|
|
RCV001237282 rs750987349 CA958898 |
61 | M>I | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1394943055 CA341285604 |
61 | M>L | No |
ClinGen TOPMed |
|
|
rs1388219872 CA341285580 |
64 | A>V | No |
ClinGen gnomAD |
|
|
rs1662604844 RCV001207246 |
65 | G>R | No |
ClinVar dbSNP |
|
|
rs62654395 COSM1667716 CA958897 |
65 | G>V | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA958896 rs762081422 |
66 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs997726534 CA26842474 |
73 | I>T | No |
ClinGen TOPMed |
|
|
CA341285515 rs1264338576 |
75 | C>Y | No |
ClinGen TOPMed |
|
|
rs61748527 CA341285499 |
77 | V>A | No |
ClinGen gnomAD |
|
|
rs148529158 CA958892 |
78 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1256178077 RCV001244854 CA341285477 |
80 | P>L | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA958890 rs747878343 |
81 | C>* | No |
ClinGen ExAC gnomAD |
|
|
CA341285468 rs1473980302 |
82 | F>L | No |
ClinGen TOPMed |
|
|
RCV000085482 rs61748528 |
83 | Q>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 83 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000085483 rs61751390 |
84 | S>missing | No |
ClinVar dbSNP |
|
|
CA958889 rs778817150 |
84 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA341285435 rs1463176839 |
86 | T>I | No |
ClinGen gnomAD |
|
|
rs1452638406 CA341285433 |
87 | P>A | No |
ClinGen TOPMed |
|
|
rs754554866 CA958888 |
88 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs865925787 CA26842454 COSM1684843 |
91 | P>S | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
| TCGA novel | 92 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341285394 rs1386926864 |
93 | I>T | No |
ClinGen TOPMed |
|
|
CA341285387 rs1382695024 |
94 | V>A | No |
ClinGen TOPMed |
|
|
CA341285381 rs1312265858 |
95 | S>T | No |
ClinGen TOPMed |
|
|
CA341285322 rs575809706 |
99 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA958884 rs575809706 |
99 | N>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341285316 rs1380689567 |
99 | N>S | No |
ClinGen gnomAD |
|
|
rs1390936521 CA341285266 |
101 | I>T | No |
ClinGen gnomAD |
|
|
rs1054538871 CA26895942 |
102 | L>F | No |
ClinGen gnomAD |
|
|
CA341293244 rs1167101620 |
103 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 104 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 104 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1570430907 CA341293228 |
105 | V>G | No |
ClinGen Ensembl |
|
|
CA26895916 rs765429911 |
107 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958863 rs759799179 COSM913475 |
107 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
RCV000085561 rs61748531 |
110 | Q>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 111 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26895876 rs558671490 |
114 | M>I | No |
ClinGen Ensembl |
|
|
CA341293174 rs774358118 |
114 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958857 rs768544956 |
114 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA958858 rs774358118 |
114 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1203433117 CA341293123 |
121 | H>Y | No |
ClinGen gnomAD |
|
|
rs1344635783 CA341293117 |
122 | L>I | No |
ClinGen gnomAD |
|
|
rs138359497 CA341293104 |
124 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769541140 CA958854 |
124 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341293103 rs769541140 |
124 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341293083 rs1438605451 |
127 | T>S | No |
ClinGen gnomAD |
|
|
rs780523124 CA958852 |
129 | L>I | No |
ClinGen ExAC gnomAD |
|
|
RCV001059878 rs1662505763 |
130 | H>missing | No |
ClinVar dbSNP |
|
|
CA958851 rs770491448 |
131 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA26895844 rs770491448 |
131 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA26895843 rs910086291 |
132 | L>F | No |
ClinGen Ensembl |
|
|
rs1372134179 CA341293025 |
136 | M>V | No |
ClinGen gnomAD |
|
|
CA341293017 rs1308282008 |
137 | D>N | No |
ClinGen gnomAD |
|
|
CA958850 rs747410807 |
138 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs983831765 CA26895828 |
139 | L>F | No |
ClinGen TOPMed |
|
|
rs369105023 RCV000994048 CA341292997 |
140 | R>P | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs369105023 CA958848 |
140 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1173809441 CA341292998 |
140 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1085307835 CA341292987 RCV000489512 |
142 | H>Y | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA341292958 rs1280893607 |
146 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs755152303 CA958845 |
146 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 149 | R>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1448232035 CA341291461 |
149 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1570426448 CA341291441 |
150 | G>R | No |
ClinGen Ensembl |
|
|
CA958829 rs62646862 |
152 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143476180 CA958827 |
153 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958828 rs755348328 |
153 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1662330621 RCV001233700 |
153 | I>V | No |
ClinVar dbSNP |
|
|
CA341291342 RCV000994047 rs1570426424 RCV001199618 |
155 | D>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs953605928 CA26891117 |
157 | L>* | No |
ClinGen Ensembl |
|
| TCGA novel | 157 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341291210 rs767738064 |
159 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 159 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000483659 rs1064793005 CA16617212 COSM255382 |
160 | E>* | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
rs1475168753 CA341291178 |
160 | E>D | No |
ClinGen gnomAD |
|
|
CA227240 rs62645943 RCV000085675 |
161 | E>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs758365569 CA958823 |
161 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1348309841 CA341290995 |
170 | N>Y | No |
ClinGen gnomAD |
|
|
RCV001218197 CA958820 rs765059735 |
171 | I>F | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA26891012 rs112673455 |
179 | Y>C | No |
ClinGen Ensembl |
|
|
RCV001046624 rs1662327014 |
179 | Y>H | No |
ClinVar dbSNP |
|
|
rs760281123 CA958817 |
180 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs772735093 CA958816 COSM913472 |
187 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs202198282 RCV001091619 CA958815 |
187 | R>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1361607044 CA341290580 |
189 | E>A | No |
ClinGen TOPMed |
|
|
rs1311605384 CA341290566 |
190 | Q>R | No |
ClinGen TOPMed |
|
| rs374454045 | 191 | F>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26887153 rs146117175 |
193 | H>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958795 rs146117175 |
193 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958796 rs761305962 COSM397124 |
193 | H>Y | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs780256905 CA26887152 |
194 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1206857720 CA341289772 |
195 | V>F | No |
ClinGen gnomAD |
|
|
RCV000658517 CA958794 rs769176363 |
196 | P>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA958792 RCV001055315 rs142985501 |
197 | D>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA958791 rs142985501 |
197 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 198 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA958790 rs746039623 |
199 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA26887091 rs1040637568 |
201 | K>T | No |
ClinGen TOPMed |
|
|
rs754899561 CA958785 |
204 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
RCV001233770 rs1662214905 |
205 | C>F | No |
ClinVar dbSNP |
|
|
CA341289703 rs1301209205 |
206 | S>N | No |
ClinGen gnomAD |
|
|
CA341289708 rs1401738025 |
206 | S>R | No |
ClinGen gnomAD |
|
|
CA958782 rs147807073 COSM913471 RCV001039283 |
207 | E>K | Variant assessed as Somatic; 0.0 impact. oesophagus endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs147807073 CA958783 RCV001337630 |
207 | E>Q | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341289680 rs1472185490 |
209 | L>F | No |
ClinGen gnomAD |
|
|
CA341289643 rs61750200 |
212 | R>S | Cone-rod dystrophy 3 (cord3) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
rs751029989 RCV001044720 CA958781 |
213 | F>Y | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA341289602 rs1255085574 |
214 | I>F | No |
ClinGen gnomAD |
|
|
rs1662213265 RCV001351757 |
214 | I>N | No |
ClinVar dbSNP |
|
|
CA958780 rs763537540 |
215 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA341289575 rs1320363264 |
216 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA958779 rs763461421 |
216 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs61748537 CA26886951 |
219 | R>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| VAR_084850 | 219 | R>del | found in a patient with chorioretinal atrophy; unknown pathological significance [UniProt] | No | UniProt |
|
CA958778 rs193009561 |
220 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA958775 rs377637509 |
221 | G>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA958776 RCV001232361 rs777187728 |
221 | G>R | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs61748539 RCV000254978 |
222 | A>missing | No |
ClinVar dbSNP |
|
|
rs63749056 RCV000085838 |
223 | K>missing | No |
ClinVar dbSNP |
|
|
rs63749082 RCV000085841 |
223 | K>missing | No |
ClinVar dbSNP |
|
|
RCV000085840 rs63749081 |
223 | K>missing | No |
ClinVar dbSNP |
|
|
rs61751417 RCV000085847 |
224 | T>missing | No |
ClinVar dbSNP |
|
|
rs373540612 CA958773 RCV001057895 COSM33409 VAR_035736 |
224 | T>M | breast a breast cancer sample; somatic mutation [Cosmic, UniProt] | No |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA958768 rs149780335 |
226 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA958766 rs144310835 RCV000481221 |
226 | R>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341289405 rs1557803637 |
227 | Y>D | No |
ClinGen Ensembl |
|
|
rs370024777 CA958765 |
228 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA341289374 COSM1688063 rs1367618229 |
228 | A>V | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA958764 rs763596438 |
230 | C>* | No |
ClinGen ExAC gnomAD |
|
|
RCV001340774 CA341289331 rs1425185788 |
231 | S>F | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA958763 rs757844726 |
232 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26886812 rs28479617 |
232 | L>P | No |
ClinGen Ensembl |
|
|
CA958761 rs765644429 |
233 | S>F | No |
ClinGen ExAC gnomAD |
|
|
RCV001211044 CA341289276 rs1330135890 |
234 | Q>* | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA958760 rs760157843 |
235 | G>S | No |
ClinGen ExAC |
|
|
CA958759 rs777091662 |
236 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA341289212 rs1206183260 |
237 | L>P | No |
ClinGen gnomAD |
|
|
rs1356104318 CA341289207 |
238 | Q>E | No |
ClinGen gnomAD |
|
|
CA26886792 rs755733328 |
239 | W>S | No |
ClinGen gnomAD |
|
|
rs895125518 CA26886790 |
240 | I>V | No |
ClinGen Ensembl |
|
|
rs1247343379 CA341289122 |
241 | E>K | No |
ClinGen gnomAD |
|
|
rs62645949 RCV000085860 |
244 | L>missing | No |
ClinVar dbSNP |
|
|
CA26886749 rs74601638 |
245 | Y>C | No |
ClinGen Ensembl |
|
|
rs1557803559 CA341289005 |
246 | A>D | No |
ClinGen Ensembl |
|
|
RCV000085863 CA227453 rs62645950 |
247 | N>I | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA958754 rs774537777 |
248 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA958755 rs200719724 |
248 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA341288915 rs1161233650 |
250 | F>I | No |
ClinGen gnomAD |
|
|
rs1459168634 CA341288898 |
250 | F>L | No |
ClinGen gnomAD |
|
|
CA341288869 rs1167524755 |
251 | F>C | No |
ClinGen gnomAD |
|
|
CA958753 rs146365399 |
251 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26886691 rs1048048328 |
252 | K>N | No |
ClinGen Ensembl |
|
|
CA227456 RCV000085865 rs62645952 |
255 | R>G | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1265780497 CA341288698 |
256 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA958727 rs780691922 RCV001071700 |
258 | P>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1187040111 CA341285223 |
260 | L>F | No |
ClinGen gnomAD |
|
|
rs756734589 CA958726 |
260 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs750721834 CA958725 |
263 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs767947718 CA958724 |
264 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA958723 rs567985213 |
264 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764368214 CA958721 COSM913468 |
266 | Q>E | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1384022583 CA341285137 |
267 | G>S | No |
ClinGen TOPMed |
|
|
CA958720 rs763010473 |
268 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs375393316 CA958719 |
269 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341285100 rs1338260475 |
269 | N>S | No |
ClinGen gnomAD |
|
|
CA958718 rs770829495 |
270 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1388510409 CA341285064 |
273 | W>L | No |
ClinGen gnomAD |
|
| TCGA novel | 273 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26873397 rs189325931 |
274 | G>V | No |
ClinGen 1000Genomes |
|
| TCGA novel | 275 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747686223 RCV001325392 CA958714 |
276 | I>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1409094931 CA341285040 |
277 | L>S | No |
ClinGen gnomAD |
|
|
rs61748543 RCV000085870 |
278 | S>missing | No |
ClinVar dbSNP |
|
|
rs1318221915 CA341284979 |
278 | S>F | No |
ClinGen TOPMed |
|
|
rs1435664229 CA958712 |
279 | D>N | No |
ClinGen TOPMed |
|
|
CA958710 rs768480500 |
280 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs886042320 RCV000321829 |
284 | I>missing | No |
ClinVar dbSNP |
|
|
CA341284878 rs886041951 |
285 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA958707 rs779751177 |
285 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA341284872 rs779751177 |
285 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs952061844 CA26873325 |
286 | E>D | No |
ClinGen TOPMed |
|
| TCGA novel | 286 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs370632634 CA958706 |
286 | E>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1433672534 CA341284528 |
288 | I>S | No |
ClinGen TOPMed |
|
| TCGA novel | 288 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745437293 CA958687 |
289 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs959119236 RCV001246016 CA26870876 |
290 | R>Q | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA341284506 rs1206512560 |
292 | S>I | No |
ClinGen gnomAD |
|
|
CA341284502 rs1303995370 |
293 | M>V | No |
ClinGen gnomAD |
|
|
rs794727903 RCV000180146 CA203573 |
294 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341284488 rs1042772588 |
294 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA341284480 rs1553194068 RCV000513495 |
295 | D>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341284460 rs1347198803 |
298 | W>C | No |
ClinGen TOPMed |
|
|
CA26870788 rs1005920303 |
299 | V>M | No |
ClinGen Ensembl |
|
|
CA958682 CA958683 rs142076270 |
301 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1430282501 CA341284436 |
303 | L>V | No |
ClinGen gnomAD |
|
|
RCV001035836 rs755078118 CA958680 |
304 | M>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA958679 rs755078118 |
304 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs753920327 RCV001352255 CA958678 |
307 | G>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1026256692 CA26870752 |
308 | G>D | No |
ClinGen Ensembl |
|
|
CA341284403 rs1476928511 |
308 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA958677 rs542603262 |
309 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA227469 COSM1503864 rs61753055 RCV000085875 |
310 | E>Q | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
rs911073778 CA26870745 |
313 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA341284370 rs911073778 |
313 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs986641166 CA26870728 |
315 | L>V | No |
ClinGen TOPMed |
|
|
rs775277234 CA958674 |
316 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762627400 CA958675 |
316 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1308641693 CA341284331 |
320 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA958671 rs745364081 |
321 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341284319 rs1409497477 |
322 | L>I | No |
ClinGen gnomAD |
|
|
rs1661666701 RCV001091617 |
323 | L>missing | No |
ClinVar dbSNP |
|
|
rs771431962 CA958669 |
324 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs1370413025 CA341284291 |
326 | Y>C | No |
ClinGen TOPMed |
|
|
CA958667 rs778049752 |
327 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA958665 rs61751418 |
328 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1199849243 RCV001268172 |
329 | G>* | No |
ClinVar dbSNP |
|
|
rs1199849243 CA341284247 |
329 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA341284224 rs1472081651 |
330 | G>C | No |
ClinGen gnomAD |
|
|
RCV000085880 CA227478 rs61753058 |
330 | G>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA958664 rs755202002 |
331 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958663 rs753921901 |
332 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA958662 rs142231757 RCV001206019 |
333 | R>Q | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341284165 rs1570408124 |
334 | V>G | No |
ClinGen Ensembl |
|
|
CA341284171 rs1208713389 |
334 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA341284172 rs1208713389 |
334 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1057520668 CA16603803 RCV000438989 RCV001865329 |
335 | L>F | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA16603798 rs1057522235 RCV000431390 |
338 | N>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341284118 rs776269194 |
340 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1191143782 RCV001297313 CA341284121 |
340 | Y>S | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA341284093 rs1392115832 |
343 | N>S | No |
ClinGen gnomAD |
|
|
RCV001214153 rs1661663019 |
345 | Y>D | No |
ClinVar dbSNP |
|
|
RCV000085370 CA226862 rs61751422 |
346 | K>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs764915204 CA958659 |
347 | A>P | No |
ClinGen ExAC TOPMed |
|
|
rs764915204 CA341284003 |
347 | A>S | No |
ClinGen ExAC TOPMed |
|
|
rs764915204 CA341284007 |
347 | A>T | No |
ClinGen ExAC TOPMed |
|
|
CA958658 rs369165289 |
347 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 350 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26870474 COSM106408 rs144575154 |
350 | G>R | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA341283922 rs1456527211 |
352 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA958656 RCV001352433 rs577385550 |
352 | D>N | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA341283894 rs1268616305 |
354 | T>I | No |
ClinGen TOPMed |
|
|
CA26870428 rs1035193409 |
355 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA341283885 rs1035193409 |
355 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
RCV000085372 CA226866 rs61751391 |
356 | K>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs747446152 CA958655 |
358 | P>H | No |
ClinGen ExAC |
|
|
rs1160846575 CA341283822 |
359 | I>V | No |
ClinGen gnomAD |
|
|
rs1661660701 RCV001225568 |
361 | S>missing | No |
ClinVar dbSNP |
|
|
rs748487419 CA958653 |
361 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748487419 CA958652 RCV000658515 |
361 | S>Y | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1661659953 RCV001207770 |
362 | Y>C | No |
ClinVar dbSNP |
|
|
RCV001338699 rs1661659757 |
363 | D>N | No |
ClinVar dbSNP |
|
|
COSM174707 CA958650 rs768881855 |
365 | R>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA341283734 rs1244319420 |
365 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA341283732 rs1208590733 |
366 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA958649 rs749494322 |
366 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 369 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA958629 rs745913851 |
370 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs781456296 CA958628 |
371 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA958627 rs758365467 |
373 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs188540377 CA26869176 |
375 | Q>* | No |
ClinGen 1000Genomes |
|
|
rs139650730 CA958626 |
376 | S>N | No |
ClinGen ESP ExAC |
|
|
CA958625 rs778706938 |
380 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1157062089 CA341283447 |
381 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs753720666 RCV001326428 CA958624 |
385 | I>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs770754513 CA341283416 |
386 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770754513 CA958622 |
386 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770754513 CA958621 |
386 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767034759 CA958620 |
386 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762323426 CA958619 |
388 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958618 rs201263774 RCV001209196 |
389 | A>V | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA26869075 rs1043337703 |
390 | A>V | No |
ClinGen Ensembl |
|
|
rs561739905 CA26869074 |
391 | K>N | No |
ClinGen Ensembl |
|
|
CA958616 rs763206214 |
394 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA958614 rs61783978 CA26869029 |
395 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs878885399 CA26869037 |
395 | M>V | No |
ClinGen Ensembl |
|
|
CA26869013 rs866219294 |
396 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 398 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 398 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776798532 CA958612 |
398 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA341283336 rs1227986044 |
399 | L>P | No |
ClinGen gnomAD |
|
|
rs1661624556 RCV001322001 |
400 | Y>H | No |
ClinVar dbSNP |
|
|
CA958610 rs559674920 |
401 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341283320 rs1281131866 |
402 | P>S | No |
ClinGen gnomAD |
|
|
CA958608 rs150686179 |
404 | S>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs749008843 RCV001226473 CA958607 |
405 | P>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA958605 rs755715955 |
406 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA341283294 rs1169001202 |
407 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA958604 rs766946915 |
408 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370828649 CA341283286 |
409 | R>G | No |
ClinGen gnomAD |
|
|
RCV001309548 CA958603 rs267598778 |
409 | R>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA958602 rs751128744 |
410 | I>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001054466 rs1661623028 |
411 | L>P | No |
ClinVar dbSNP |
|
|
CA958600 rs763545409 |
413 | N>D | No |
ClinGen ExAC gnomAD |
|
|
RCV001308939 rs763545409 CA341283260 |
413 | N>Y | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA341282500 RCV000585333 rs1553193893 |
414 | A>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1279729551 CA341282496 |
415 | N>D | No |
ClinGen gnomAD |
|
|
rs765907001 CA958580 |
418 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA341282459 rs1453981156 |
420 | E>G | No |
ClinGen gnomAD |
|
|
CA26868081 rs138044729 |
423 | H>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA226878 RCV000085382 rs3112831 |
423 | H>P | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
COSM913465 RCV000591736 rs138044729 CA958578 |
423 | H>Y | endometrium [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA958577 rs773118252 |
424 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1442874024 CA341282433 |
425 | R>G | No |
ClinGen gnomAD |
|
|
CA341282431 rs1218530733 |
425 | R>K | No |
ClinGen TOPMed |
|
|
rs762811617 CA958575 |
428 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs762811617 RCV001313349 |
428 | V>D | No |
ClinVar dbSNP |
|
|
rs540424205 CA958574 |
430 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341282374 rs1213348615 |
433 | E>G | No |
ClinGen gnomAD |
|
|
rs948132728 CA26867936 |
435 | G>R | No |
ClinGen Ensembl |
|
|
CA26867929 rs920723783 |
435 | G>V | No |
ClinGen TOPMed |
|
|
rs745630457 CA958573 |
438 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA341282333 rs61752391 |
439 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000085387 CA226884 rs61752392 |
442 | F>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341282294 rs1269417340 |
445 | S>R | No |
ClinGen TOPMed |
|
|
CA958571 rs746685896 |
446 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs61748553 RCV000085389 |
447 | Q>* | No |
ClinVar dbSNP |
|
|
CA958570 RCV000388365 rs777078540 |
448 | M>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA341282274 rs1169850759 RCV001063057 |
448 | M>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs1421657735 CA341282253 |
450 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1570405590 CA341282212 |
453 | D>V | No |
ClinGen Ensembl |
|
|
CA958534 rs776623078 |
456 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs766282109 CA958533 |
457 | N>K | No |
ClinGen ExAC gnomAD |
|
|
RCV001312580 rs1661579247 |
457 | N>S | No |
ClinVar dbSNP |
|
|
rs1175552999 CA341282159 |
462 | D>N | No |
ClinGen gnomAD |
|
|
CA26866986 rs755226781 |
463 | F>L | No |
ClinGen Ensembl |
|
|
RCV000085394 rs61748555 |
464 | L>missing | No |
ClinVar dbSNP |
|
|
CA341282125 rs1417847158 |
466 | R>M | No |
ClinGen TOPMed |
|
|
rs747255603 CA26866969 |
466 | R>S | No |
ClinGen gnomAD |
|
|
rs1661578607 RCV001247431 |
467 | Q>* | No |
ClinVar dbSNP |
|
|
rs771814374 CA958530 |
467 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1661578472 RCV001247429 |
469 | G>C | No |
ClinVar dbSNP |
|
|
CA341282105 rs1418139129 |
469 | G>D | No |
ClinGen gnomAD |
|
|
rs1661578472 RCV001230260 |
469 | G>R | No |
ClinVar dbSNP |
|
| TCGA novel | 469 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs886044578 CA10606932 RCV000370853 |
470 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
CA958529 rs773943744 |
473 | I>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001234376 rs1661578005 |
474 | T>missing | No |
ClinVar dbSNP |
|
|
rs756629422 CA958524 |
483 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA26866893 rs142362763 |
485 | G>S | No |
ClinGen ESP TOPMed |
|
|
rs145614671 CA26866870 |
487 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958523 RCV001228013 rs369286283 |
487 | R>W | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs934402550 CA26866862 |
489 | S>C | No |
ClinGen Ensembl |
|
|
rs757411893 CA958521 |
491 | A>P | No |
ClinGen ExAC |
|
|
CA341281965 rs1336011415 |
491 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs541850518 CA958520 |
493 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 494 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1570405411 CA341281944 |
494 | M>T | No |
ClinGen Ensembl |
|
|
CA958518 rs377135053 RCV001214023 |
494 | M>V | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs752765416 CA958517 COSM682649 |
495 | A>D | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 495 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26866821 rs865814549 |
495 | A>T | No |
ClinGen Ensembl |
|
|
CA341281931 rs1439777150 |
496 | N>S | No |
ClinGen gnomAD |
|
|
rs750836609 CA341281919 |
498 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750836609 CA239472 RCV000173997 |
498 | D>N | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA958514 rs767437562 |
500 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341281903 rs1204946868 |
500 | R>K | No |
ClinGen gnomAD |
|
|
rs768480888 CA341281896 |
501 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774145384 CA958513 |
501 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958512 rs768480888 |
501 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748809920 CA958511 |
502 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs141208724 CA26866741 |
502 | I>V | No |
ClinGen ESP |
|
|
rs62645953 RCV000085397 |
503 | F>missing | No |
ClinVar dbSNP |
|
|
rs774893612 CA958510 |
503 | F>L | No |
ClinGen ExAC gnomAD |
|
|
RCV000085398 rs281865398 |
504 | N>* | No |
ClinVar dbSNP |
|
|
RCV000592564 CA341281880 rs1243753206 |
504 | N>H | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs202008219 CA341281871 |
505 | I>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202008219 CA958509 |
505 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs148234178 CA958508 |
507 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1580385 rs375961838 CA958505 |
508 | R>H | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs375961838 CA958506 |
508 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341281853 rs138157885 |
508 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs62646867 RCV000085399 |
510 | L>missing | No |
ClinVar dbSNP |
|
|
RCV001338697 CA958503 rs758584771 |
510 | L>I | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs886039299 CA10588303 RCV000256040 |
510 | L>P | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA341281844 rs758584771 |
510 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750393418 CA958499 RCV001304833 |
513 | V>A | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA341281822 rs750393418 |
513 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958500 rs756023611 |
513 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs372838089 CA341281796 |
515 | Q>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372838089 RCV001062737 CA958497 |
515 | Q>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1276585268 CA341280666 |
520 | L>S | No |
ClinGen gnomAD |
|
|
CA958473 rs752286972 |
523 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA341280644 rs1570394071 RCV000994045 |
524 | K>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV000085403 CA226901 rs62646869 |
525 | F>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341280636 rs1390212030 |
525 | F>L | No |
ClinGen gnomAD |
|
|
rs1661180926 RCV001229773 |
526 | E>A | No |
ClinVar dbSNP |
|
|
rs1484756902 CA341280619 |
527 | S>N | No |
ClinGen TOPMed |
|
|
rs1399299284 CA341280613 |
528 | Y>H | No |
ClinGen gnomAD |
|
|
CA958469 rs145718830 RCV001045652 |
531 | E>G | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1023123094 CA26848655 |
532 | T>I | No |
ClinGen TOPMed |
|
|
CA341280561 rs1440695680 |
533 | Q>R | No |
ClinGen TOPMed |
|
|
rs1179786548 CA341280500 |
538 | A>D | No |
ClinGen gnomAD |
|
|
CA958463 rs749347970 |
543 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA341280402 rs1278553281 |
545 | N>K | No |
ClinGen gnomAD |
|
|
rs780313752 CA958462 |
545 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 546 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs148391873 RCV001315802 CA958461 |
546 | M>L | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1034579541 CA26848617 |
548 | W>* | No |
ClinGen Ensembl |
|
|
rs61748557 CA341280344 |
549 | A>S | No |
ClinGen gnomAD |
|
|
RCV001203017 CA958458 rs141864243 |
552 | V>A | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA226916 RCV000085415 rs61752396 |
553 | F>L | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs1156983103 CA341280304 |
553 | F>Y | No |
ClinGen gnomAD |
|
|
CA341280291 rs1380991789 |
554 | P>S | No |
ClinGen gnomAD |
|
|
CA341280275 rs1179239331 |
555 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1038826469 CA26848579 |
556 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA26848576 rs113789195 |
557 | Y>H | No |
ClinGen Ensembl |
|
| TCGA novel | 562 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA958457 rs754652550 |
563 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1455968367 CA341280133 |
564 | P>L | No |
ClinGen TOPMed |
|
|
CA341280155 rs1557787783 |
564 | P>S | No |
ClinGen Ensembl |
|
|
rs761105591 CA26848560 |
566 | H>D | No |
ClinGen ExAC |
|
|
rs761105591 CA958454 |
566 | H>N | No |
ClinGen ExAC |
|
|
CA26848556 rs943713680 |
566 | H>P | No |
ClinGen Ensembl |
|
|
CA958452 rs768129542 |
566 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958450 rs774819519 |
567 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 570 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768720923 CA958449 |
570 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA26848535 rs529824865 |
571 | I>S | No |
ClinGen Ensembl |
|
|
rs1557787756 CA341280062 RCV001002843 RCV000760305 |
572 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1286420049 CA341280038 |
575 | I>L | No |
ClinGen gnomAD |
|
|
rs1557787747 CA341280030 |
575 | I>T | No |
ClinGen Ensembl |
|
|
CA958446 rs547063913 |
577 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1402650470 CA341279970 |
580 | K>E | No |
ClinGen gnomAD |
|
|
rs1181535777 CA341279943 |
582 | N>D | No |
ClinGen gnomAD |
|
|
rs978828559 CA26848508 |
584 | I>N | No |
ClinGen Ensembl |
|
|
RCV000504763 rs1553192682 CA341279878 |
586 | D>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA26848281 rs972888328 |
588 | Y>F | No |
ClinGen gnomAD |
|
| TCGA novel | 590 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755803987 CA958423 |
594 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1200739827 CA341279758 |
594 | R>T | No |
ClinGen TOPMed |
|
|
RCV001316552 rs1661166511 |
596 | D>Y | No |
ClinVar dbSNP |
|
|
RCV001227334 rs1661166046 |
598 | V>missing | No |
ClinVar dbSNP |
|
|
CA341279709 rs201838557 |
598 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs61752397 CA341279687 |
600 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs61752397 RCV000085426 CA226929 |
600 | D>Y | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA226934 rs61749411 RCV000085430 |
604 | I>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs147932486 CA958419 RCV001314291 |
606 | G>D | No |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
|
CA226938 rs61752398 RCV000085433 |
608 | F>L | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341279583 rs61752398 |
608 | F>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000085434 CA226940 rs61752399 |
608 | F>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA958416 rs771051333 |
610 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA958415 rs760735952 |
611 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1175334072 CA341279525 |
613 | D>N | No |
ClinGen gnomAD |
|
|
CA958412 rs749053239 |
614 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749053239 CA958413 |
614 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374931400 RCV001302981 CA958411 |
615 | V>F | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341279496 rs374931400 |
615 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26848136 rs374931400 |
615 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1557787457 CA341279467 |
617 | Q>E | No |
ClinGen Ensembl |
|
|
CA958409 rs745549366 |
617 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs769283184 CA958410 RCV001234549 |
617 | Q>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
RCV000085436 CA226943 rs61751394 |
618 | G>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341279443 rs1231688819 |
619 | I>F | No |
ClinGen gnomAD |
|
|
CA341279445 rs1231688819 |
619 | I>V | No |
ClinGen gnomAD |
|
|
CA958408 rs780772475 |
620 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA958407 rs141122703 |
621 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751079871 CA958406 |
621 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA341279383 rs1202066198 |
623 | Q>H | No |
ClinGen gnomAD |
|
|
CA341279389 rs1233316727 |
623 | Q>R | No |
ClinGen TOPMed |
|
|
rs878853396 CA341279369 |
625 | Q>E | No |
ClinGen gnomAD |
|
|
rs1223304524 CA341279353 |
626 | A>P | No |
ClinGen gnomAD |
|
|
COSM913462 CA958405 rs778392569 |
626 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA341279327 rs753058962 |
628 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs753058962 CA958404 |
628 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA26848044 rs1057212368 |
628 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA341279323 rs1200070789 |
629 | P>A | No |
ClinGen TOPMed |
|
|
rs765707190 CA958403 |
629 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1464323794 CA341279316 |
630 | V>F | No |
ClinGen gnomAD |
|
|
CA341279310 rs1360564195 |
631 | G>V | No |
ClinGen gnomAD |
|
|
rs61749413 RCV000085438 |
632 | I>missing | No |
ClinVar dbSNP |
|
|
rs1570393144 CA341279297 |
633 | Y>S | No |
ClinGen Ensembl |
|
|
rs1037595939 CA26848027 |
634 | L>H | No |
ClinGen TOPMed |
|
|
rs1176267143 CA341279285 |
635 | Q>R | No |
ClinGen gnomAD |
|
|
rs1440824352 CA341279264 |
638 | P>H | No |
ClinGen gnomAD |
|
|
RCV001349168 rs1440824352 |
638 | P>L | No |
ClinVar dbSNP |
|
|
rs754088610 CA958401 COSM913461 RCV001199602 |
638 | P>S | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
rs1570393097 RCV001317912 |
639 | Y>C | No |
ClinVar dbSNP |
|
|
rs1570393097 CA341279258 |
639 | Y>S | No |
ClinGen Ensembl |
|
|
CA958399 rs760790294 |
640 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs766570903 CA958400 |
640 | P>T | No |
ClinGen ExAC gnomAD |
|
|
RCV001057427 rs1661159038 |
641 | C>R | No |
ClinVar dbSNP |
|
|
rs1421487671 CA341279178 |
641 | C>W | No |
ClinGen TOPMed |
|
|
rs61749416 CA341279182 |
641 | C>Y | No |
ClinGen TOPMed |
|
|
RCV001340688 rs61749417 |
643 | V>L | No |
ClinVar dbSNP |
|
|
CA958397 rs61749418 |
645 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
COSM913460 rs548888187 CA958396 |
646 | S>F | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA958379 RCV001065022 rs770565005 |
648 | M>I | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 648 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459874784 CA341278977 |
648 | M>V | No |
ClinGen gnomAD |
|
|
rs374458630 CA958378 RCV001044698 |
649 | I>F | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341278950 rs1557786421 |
650 | I>F | No |
ClinGen Ensembl |
|
|
CA341278922 rs1463298297 |
652 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
RCV001298146 rs1661100332 |
654 | C>R | No |
ClinVar dbSNP |
|
|
rs779455131 CA958376 |
656 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA341278862 rs199590367 |
657 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1226435882 CA341278856 |
657 | I>T | No |
ClinGen gnomAD |
|
|
COSM682654 rs199590367 CA958374 |
657 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1661099730 RCV001212178 |
659 | M>I | No |
ClinVar dbSNP |
|
|
rs1375584794 CA341278827 |
659 | M>T | No |
ClinGen TOPMed |
|
|
rs1315758729 CA341278832 |
659 | M>V | No |
ClinGen gnomAD |
|
|
rs1011974288 CA26846593 |
660 | V>M | No |
ClinGen Ensembl |
|
|
CA341278788 rs1218846489 |
662 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1218846489 CA341278789 |
662 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs61749421 CA226966 RCV000085453 |
663 | W>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341278776 rs767782886 |
664 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA958370 rs767782886 |
664 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA26846556 rs867526388 |
668 | S>F | No |
ClinGen Ensembl |
|
|
rs1243342093 CA341278754 |
668 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs545963645 CA958368 CA26846532 |
669 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1037340485 CA26846545 |
669 | M>V | No |
ClinGen Ensembl |
|
|
rs377508857 CA958367 |
672 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1052151674 CA26846520 |
673 | S>N | No |
ClinGen gnomAD |
|
|
CA958366 RCV001052492 rs759410405 |
674 | I>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
| TCGA novel | 677 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001057961 CA341278685 rs1376036671 |
678 | K>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs760611542 CA958363 |
679 | E>D | No |
ClinGen ExAC gnomAD |
|
|
RCV001312083 rs1661097693 |
680 | L>missing | No |
ClinVar dbSNP |
|
|
CA341278677 rs1557786317 |
680 | L>M | No |
ClinGen Ensembl |
|
|
RCV001343773 CA958361 rs761380652 |
681 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
| VAR_084883 | 681 | R>del | found in a patient with macular dystrophy; unknown pathological significance [UniProt] | No | UniProt |
|
rs1259726208 CA341278626 |
688 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1557786289 RCV001348632 CA341278623 |
688 | N>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1259726208 CA341278625 |
688 | N>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs942734318 RCV001230392 CA26846450 |
690 | G>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs749772656 CA958358 |
690 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 693 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA958357 rs780400907 |
693 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA958356 rs770140944 RCV001065023 |
694 | A>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
RCV000085460 CA226976 rs61749424 |
697 | W>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs746279613 CA958355 |
698 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA341278559 rs1398785943 |
698 | C>Y | No |
ClinGen TOPMed |
|
| TCGA novel | 699 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1057519142 RCV000415897 CA16043781 |
699 | T>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 703 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341278500 rs766854135 |
706 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA958353 rs766854135 |
706 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1332429382 CA341278499 |
707 | I>L | No |
ClinGen gnomAD |
|
|
rs753711353 CA958349 RCV001065132 |
708 | M>I | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs754874649 CA958350 |
708 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs147051178 CA341278492 |
708 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341278490 rs754874649 |
708 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs147051178 CA958351 |
708 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs267598777 CA958347 CA958346 |
710 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA26846354 rs267598776 |
711 | S>C | No |
ClinGen Ensembl |
|
|
CA341278463 rs1557786222 |
712 | I>T | No |
ClinGen Ensembl |
|
|
rs1239889663 CA341278459 |
713 | F>L | No |
ClinGen gnomAD |
|
|
CA341278441 rs1441572907 |
716 | T>A | No |
ClinGen gnomAD |
|
|
CA341278435 rs1345184930 |
717 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA958344 rs768056773 |
719 | I>L | No |
ClinGen ExAC gnomAD |
|
|
COSM1688058 CA958342 rs775836570 |
720 | M>I | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA958343 rs762593392 |
720 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341278153 rs1361244275 |
723 | R>G | No |
ClinGen gnomAD |
|
|
rs765683730 CA958323 |
725 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs765683730 CA341278121 |
725 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA341278125 rs1570387627 |
725 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 726 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA16617210 RCV000481017 rs1064793007 |
728 | S>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341278075 RCV000513309 rs776910485 |
728 | S>R | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs771277298 CA958320 |
729 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA341278058 rs559433489 |
730 | P>L | No |
ClinGen TOPMed |
|
|
CA26844234 rs559433489 |
730 | P>R | No |
ClinGen TOPMed |
|
|
CA341278035 rs772380617 |
734 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772380617 CA958317 |
734 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1570387558 CA341278013 RCV001001301 |
737 | L>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA26844216 rs200277065 |
738 | L>F | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA341278003 rs1292586798 |
739 | A>T | No |
ClinGen gnomAD |
|
|
rs1019525186 CA26844212 |
742 | T>A | No |
ClinGen Ensembl |
|
|
rs201242928 CA26844206 |
742 | T>I | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1276613701 CA341277971 |
744 | T>S | No |
ClinGen gnomAD |
|
|
RCV001306945 rs1660994402 |
746 | M>K | No |
ClinVar dbSNP |
|
|
RCV000658514 rs1293462383 CA341277959 |
746 | M>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
| TCGA novel | 748 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1220683379 CA341277930 |
750 | L>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1064793008 RCV000483929 CA16617209 |
750 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA26844195 rs1801369 VAR_014703 |
752 | S>I | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA341277913 rs1570387508 |
753 | T>P | No |
ClinGen Ensembl |
|
|
CA26844186 rs375943659 CA341277901 |
754 | F>L | No |
ClinGen ESP TOPMed |
|
|
rs1274302295 CA341277907 |
754 | F>L | No |
ClinGen gnomAD |
|
|
rs1660993598 RCV001313714 |
755 | F>V | No |
ClinVar dbSNP |
|
|
RCV001064069 CA958313 rs372508062 |
756 | S>F | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 761 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs61752403 RCV000085468 |
763 | A>* | No |
ClinVar dbSNP |
|
|
RCV001242492 rs1660985683 |
765 | S>K | No |
ClinVar dbSNP |
|
|
CA341277833 RCV001199604 RCV001860547 rs61749429 |
765 | S>T | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs1325382938 CA341277825 |
766 | G>V | No |
ClinGen gnomAD |
|
|
CA26844128 RCV001174686 rs946594091 RCV001873649 |
768 | I>M | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA958311 rs751408792 |
769 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA341277806 rs1478578782 |
770 | F>L | No |
ClinGen gnomAD |
|
|
RCV001062310 rs1660985145 |
770 | F>L | No |
ClinVar dbSNP |
|
|
CA958309 rs758090662 |
771 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958310 RCV001038126 rs758090662 |
771 | T>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs764727316 CA958307 |
773 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs759110306 CA958306 RCV001348870 |
777 | I>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs777106757 CA958305 |
778 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000085473 rs61749430 CA226992 |
779 | C>* | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs139238191 CA958304 |
779 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374854647 CA958303 |
779 | C>S | No |
ClinGen ESP ExAC |
|
|
CA958300 rs774505934 |
781 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958299 rs774505934 COSM1345007 |
781 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA26844053 RCV000594953 rs911580078 |
782 | W>* | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA341277734 rs768852382 |
782 | W>G | No |
ClinGen ExAC TOPMed |
|
|
CA958298 rs768852382 |
782 | W>R | No |
ClinGen ExAC TOPMed |
|
|
rs781254854 CA958297 RCV000254765 |
785 | R>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
RCV000478565 rs781254854 CA958296 |
785 | R>G | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA958294 RCV001320597 rs368457541 COSM1345006 |
785 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA958295 rs368457541 |
785 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA341277694 rs149214080 |
788 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958292 RCV001053886 rs149214080 |
788 | A>T | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341277689 rs1340980590 |
789 | E>Q | No |
ClinGen TOPMed |
|
|
rs547925462 CA26844027 |
790 | L>R | No |
ClinGen TOPMed |
|
|
rs1570387324 CA341277674 |
791 | K>R | No |
ClinGen Ensembl |
|
|
CA341277663 rs1288847102 |
792 | K>N | No |
ClinGen TOPMed |
|
|
CA341277662 rs1375925632 RCV001350324 |
793 | A>T | No |
ClinGen ClinVar dbSNP gnomAD |
|
| TCGA novel | 793 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs281865399 RCV000085476 |
795 | S>missing | No |
ClinVar dbSNP |
|
|
rs1420128252 CA341277202 |
795 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 798 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001227317 rs1660945616 |
800 | V>missing | No |
ClinVar dbSNP |
|
|
rs61752405 RCV000085478 |
804 | F>missing | No |
ClinVar dbSNP |
|
|
CA341277119 rs1317347413 |
808 | Y>F | No |
ClinGen gnomAD |
|
|
rs779632834 CA958271 |
809 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs756515248 CA958270 |
810 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs758777521 CA958269 RCV001063595 COSM913456 |
811 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs368016280 CA958268 |
811 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140671840 CA958266 |
815 | Q>K | No |
ClinGen ESP ExAC TOPMed |
|
|
rs61750202 CA341277056 |
818 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001299444 rs1660943170 |
819 | L>Q | No |
ClinVar dbSNP |
|
|
rs914542176 CA26843397 RCV001350696 |
820 | Q>P | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA958264 rs769908894 |
822 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs267598775 CA26843385 |
823 | N>S | No |
ClinGen Ensembl |
|
|
CA341277005 rs1235042753 |
826 | N>I | No |
ClinGen TOPMed |
|
|
CA958259 rs768241038 |
830 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001211895 rs1660941624 |
832 | D>G | No |
ClinVar dbSNP |
|
|
CA26843349 rs866110084 |
832 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
RCV001239344 CA958256 rs755640766 |
833 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1411484168 CA341276937 |
836 | F>L | No |
ClinGen gnomAD |
|
|
CA341276911 rs1190288078 |
840 | M>K | No |
ClinGen gnomAD |
|
|
rs1469199783 CA341276915 |
840 | M>L | No |
ClinGen TOPMed |
|
|
CA958250 rs143100856 |
841 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958251 rs143100856 |
841 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958249 rs752950057 |
842 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs752950057 CA26843300 |
842 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1660938718 RCV001207554 |
843 | M>I | No |
ClinVar dbSNP |
|
|
CA958248 rs765425569 |
844 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1660938577 RCV001202579 |
844 | L>R | No |
ClinVar dbSNP |
|
|
VAR_008493 CA227006 RCV000085484 rs61754027 |
846 | D>H | severely decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; severely decreases N-Ret-PE-stimulated ATPase activity; very low substrate binding [UniProt] | No |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA341276865 rs1390658269 |
847 | A>S | No |
ClinGen gnomAD |
|
|
CA958247 rs759628691 |
849 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA26843273 rs143797418 |
850 | Y>C | No |
ClinGen ESP |
|
|
rs1270484571 CA341276834 |
852 | L>F | No |
ClinGen gnomAD |
|
|
rs140720250 CA26843259 |
852 | L>S | No |
ClinGen ESP |
|
|
rs377670057 CA958245 |
854 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs61749438 CA341276817 |
855 | W>C | No |
ClinGen gnomAD |
|
|
rs201223321 CA26843232 |
856 | Y>H | No |
ClinGen Ensembl |
|
|
rs1660936980 RCV001347893 |
858 | D>G | No |
ClinVar dbSNP |
|
|
rs140281495 CA341276793 |
859 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1660936779 RCV001199606 |
860 | V>A | No |
ClinVar dbSNP |
|
|
rs775189672 CA958242 |
860 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781556982 CA26843211 |
861 | F>V | No |
ClinGen Ensembl |
|
|
CA227015 rs61751382 RCV000085491 |
862 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341276207 rs76157638 |
863 | G>E | Cone-rod dystrophy 3 (cord3) Retinitis pigmentosa (rp) [Ensembl] | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA341276200 rs1379569514 |
864 | D>E | No |
ClinGen gnomAD |
|
|
CA26841998 rs267598774 |
864 | D>N | No |
ClinGen Ensembl |
|
|
CA26841995 rs773824216 |
867 | T>S | No |
ClinGen Ensembl |
|
|
rs751791095 RCV001212111 |
868 | P>missing | No |
ClinVar dbSNP |
|
|
CA10588301 rs867875828 RCV000255758 |
870 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
CA958219 rs778392568 |
871 | W>G | No |
ClinGen ExAC gnomAD |
|
|
RCV001246765 rs1660844241 |
874 | L>missing | No |
ClinVar dbSNP |
|
|
rs1660843612 RCV001305348 |
876 | Q>P | No |
ClinVar dbSNP |
|
|
CA341276118 rs1357281730 |
877 | E>G | No |
ClinGen gnomAD |
|
|
rs779160669 RCV001346278 COSM913455 CA958217 |
878 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA958215 rs150984176 |
879 | Y>C | No |
ClinGen ESP ExAC |
|
|
rs1129477 CA958213 |
882 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs750311446 CA26841968 |
883 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA341276072 rs1570382596 |
884 | E>G | No |
ClinGen Ensembl |
|
|
rs1253585396 CA341276066 |
885 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA341276051 rs1570380098 |
886 | C>G | No |
ClinGen Ensembl |
|
|
rs1432916392 CA341276036 |
888 | T>A | No |
ClinGen gnomAD |
|
|
rs753715991 CA958189 |
888 | T>S | No |
ClinGen ExAC gnomAD |
|
|
RCV001211845 rs766079334 CA958188 |
891 | E>D | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA341276008 rs1199789277 |
892 | R>K | No |
ClinGen TOPMed |
|
|
CA341275976 rs1570380071 |
897 | T>P | No |
ClinGen Ensembl |
|
|
rs1457788497 CA341275945 |
902 | E>G | No |
ClinGen TOPMed |
|
| TCGA novel | 903 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001315978 CA958187 rs774699366 |
904 | T>M | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA958185 rs749616079 |
905 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA341275921 rs1406771874 |
906 | D>N | No |
ClinGen TOPMed |
|
|
COSM1580384 CA958183 rs769948281 |
907 | P>L | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA341275899 rs138247113 |
909 | H>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958182 rs138247113 |
909 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26841375 rs968740808 |
910 | P>L | No |
ClinGen Ensembl |
|
|
CA341275866 rs1302088524 |
912 | G>E | No |
ClinGen gnomAD |
|
|
COSM1688056 rs1216408517 CA341275875 |
912 | G>R | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
| rs1362746093 | 914 | H>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| VAR_012543 | 914 | H>R | No | UniProt | |
|
rs139035971 CA958179 |
915 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958180 rs139035971 |
915 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs539815930 CA958164 |
919 | E>D | No |
ClinGen ExAC gnomAD |
|
|
RCV001312740 rs533451778 CA958163 |
920 | R>C | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
rs376526710 CA958162 |
920 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749234960 CA958158 |
921 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1277583380 CA341275596 |
921 | E>K | No |
ClinGen TOPMed |
|
|
CA341275579 rs1443880828 |
923 | P>S | No |
ClinGen gnomAD |
|
|
rs1302568799 CA341275558 |
926 | V>F | No |
ClinGen TOPMed |
|
|
CA958154 rs767041978 |
929 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA958155 rs750273269 |
929 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs756961160 CA341275533 |
930 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958152 rs573904763 |
931 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA341275523 COSM3419593 rs775951957 |
932 | K>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA958151 rs762504253 |
932 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA958149 rs765769761 |
935 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001050210 rs1660704375 |
936 | K>N | No |
ClinVar dbSNP |
|
|
CA341275494 rs1234899018 |
937 | I>T | No |
ClinGen gnomAD |
|
|
CA958147 rs771000047 |
940 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA958145 RCV001307168 rs113503406 |
941 | C>F | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA26840863 rs113503406 |
941 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958144 rs772266296 |
942 | G>R | No |
ClinGen ExAC |
|
|
RCV000085511 rs281865513 |
943 | R>missing | No |
ClinVar dbSNP |
|
|
rs61749446 RCV000085509 CA227035 |
943 | R>G | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001268771 rs1660702616 |
944 | P>missing | No |
ClinVar dbSNP |
|
|
rs1356117539 CA341275459 |
944 | P>S | No |
ClinGen TOPMed |
|
|
CA26840843 rs150616268 |
945 | A>S | No |
ClinGen ESP TOPMed |
|
|
CA341275440 rs1343910380 |
947 | D>G | No |
ClinGen gnomAD |
|
|
CA341275444 rs1324891342 |
947 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs751222829 CA958139 |
948 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA958140 rs751222829 |
948 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958138 rs148545207 RCV001052957 |
948 | R>H | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1660702072 RCV001300387 |
951 | I>T | No |
ClinVar dbSNP |
|
|
rs1338802362 CA341275420 |
951 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 952 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341275408 rs1186054597 |
952 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 953 | F>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341275389 rs1553191096 |
955 | E>D | No |
ClinGen Ensembl |
|
|
CA958135 COSM1345004 RCV000755764 rs765680067 |
955 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA958136 rs765680067 |
955 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760102207 CA958134 |
955 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1487933769 CA341275374 |
957 | Q>H | No |
ClinGen gnomAD |
|
|
rs754082669 CA958131 |
958 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA341275363 rs772463435 |
960 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA958128 rs772463435 |
960 | A>T | Variant assessed as Somatic; 9.239e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs761945060 CA958127 |
960 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs61750203 RCV000085519 |
962 | L>missing | No |
ClinVar dbSNP |
|
|
rs1660700735 RCV001246510 |
963 | G>R | No |
ClinVar dbSNP |
|
|
CA341275317 rs1291080436 |
967 | A>G | No |
ClinGen gnomAD |
|
|
RCV001230252 rs1291080436 |
967 | A>V | No |
ClinVar dbSNP |
|
|
RCV000175396 CA241135 rs794727220 |
968 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV001247612 rs1660700260 |
969 | K>E | No |
ClinVar dbSNP |
|
|
RCV001346000 rs1660700107 |
970 | T>I | No |
ClinVar dbSNP |
|
|
CA958122 rs61749451 |
972 | T>I | Retinitis pigmentosa (rp) [Ensembl] | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
CA341275292 rs1570377836 |
972 | T>P | No |
ClinGen Ensembl |
|
|
CA341275268 rs281865400 |
974 | S>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 974 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341275265 rs1252024719 |
974 | S>F | No |
ClinGen TOPMed |
|
|
CA958091 rs150098352 |
975 | I>M | No |
ClinGen ESP ExAC TOPMed |
|
|
CA958092 rs146140442 |
975 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341275263 rs1200209303 |
975 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
RCV001063061 CA958090 rs148015012 |
977 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs147826775 CA958088 |
981 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA958087 rs760608881 |
982 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA341275207 rs1327544801 |
986 | T>A | No |
ClinGen gnomAD |
|
|
rs1660624204 RCV001041602 |
986 | T>I | No |
ClinVar dbSNP |
|
|
CA341275184 rs1406273620 |
990 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA26839871 rs865963204 |
990 | G>R | No |
ClinGen Ensembl |
|
|
CA227062 rs61749455 RCV000085532 |
991 | G>* | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341275178 rs1297410481 |
991 | G>V | No |
ClinGen TOPMed |
|
|
RCV000085533 rs281865401 |
993 | D>missing | No |
ClinVar dbSNP |
|
|
CA341275160 rs1383922944 |
994 | I>T | No |
ClinGen TOPMed |
|
|
rs779445155 CA958083 |
995 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA341275149 rs1570374969 |
996 | T>P | No |
ClinGen Ensembl |
|
|
CA341275139 rs1320988700 |
997 | S>T | No |
ClinGen TOPMed |
|
|
RCV001207329 rs1660621523 |
998 | L>P | No |
ClinVar dbSNP |
|
|
CA341275128 rs1194603868 |
999 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs781780151 CA958082 |
1000 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1216142497 CA341275122 |
1000 | A>T | No |
ClinGen TOPMed |
|
|
rs781780151 RCV001242322 CA958081 |
1000 | A>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
RCV001302482 rs752000268 CA958079 |
1002 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs757678409 CA958080 |
1002 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA958078 rs764324152 |
1003 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26839810 rs1007214776 |
1004 | S>G | No |
ClinGen Ensembl |
|
|
rs758560501 CA958077 |
1004 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341275094 rs1422542043 |
1005 | L>F | No |
ClinGen TOPMed |
|
|
rs370665697 CA958076 |
1007 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341275072 rs1391251856 |
1008 | C>S | No |
ClinGen gnomAD |
|
|
rs1386535443 CA341275063 |
1009 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 1012 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1660619507 RCV001301878 |
1014 | L>missing | No |
ClinVar dbSNP |
|
|
CA341275027 rs1219526989 |
1015 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
CA341275026 rs1219526989 |
1015 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs112300381 CA26866478 |
1020 | V>A | No |
ClinGen TOPMed |
|
|
RCV001244287 rs61749459 CA26866445 |
1022 | E>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 1023 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759064844 CA958050 |
1024 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs759064844 CA958049 |
1024 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1660575947 RCV001058789 |
1025 | L>P | No |
ClinVar dbSNP |
|
|
rs1016733348 CA26866411 |
1030 | L>V | No |
ClinGen TOPMed |
|
|
rs61750060 RCV001244144 |
1031 | K>* | No |
ClinVar dbSNP |
|
| TCGA novel | 1032 | G>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771495707 CA958047 |
1032 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA958046 rs747463778 |
1032 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA958043 rs748585116 |
1034 | S>P | No |
ClinGen ExAC gnomAD |
|
|
RCV000322200 CA958042 rs779067729 |
1035 | Q>E | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs566342133 CA958041 |
1040 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1394689151 CA341292535 |
1042 | M>T | No |
ClinGen gnomAD |
|
|
CA341292512 rs1394101107 |
1045 | M>T | No |
ClinGen gnomAD |
|
|
rs886042904 RCV000351622 |
1047 | E>missing | No |
ClinVar dbSNP |
|
|
CA958039 rs143860733 |
1047 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751441724 CA958038 |
1048 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1169767756 CA341292485 |
1049 | T>A | No |
ClinGen gnomAD |
|
|
CA26866329 rs1034969302 |
1050 | G>S | No |
ClinGen TOPMed |
|
|
CA341292467 rs1213555679 |
1052 | H>R | No |
ClinGen TOPMed |
|
|
rs1557778526 CA341292469 |
1052 | H>Y | No |
ClinGen Ensembl |
|
|
rs758100380 CA958037 |
1053 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61752412 CA958036 |
1055 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA958035 RCV001352568 COSM143666 COSM1181251 rs187071406 |
1055 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA341292442 rs1489203291 |
1056 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA341292429 rs1265535267 |
1058 | E>K | No |
ClinGen gnomAD |
|
|
rs1265535267 CA341292428 |
1058 | E>Q | No |
ClinGen gnomAD |
|
|
rs760279930 CA958032 |
1059 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs765972338 CA958033 |
1059 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs772663974 CA958031 |
1060 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
RCV001234194 rs966434923 CA26866252 |
1062 | L>I | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA341292403 rs966434923 |
1062 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA958013 rs762388890 |
1065 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA958011 rs768997888 |
1066 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs768997888 CA958012 |
1066 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA26865717 rs972573745 |
1068 | R>I | No |
ClinGen Ensembl |
|
|
CA341292352 rs1557778273 |
1069 | K>E | No |
ClinGen Ensembl |
|
|
rs61750063 RCV000085557 |
1070 | L>missing | No |
ClinVar dbSNP |
|
|
rs781332563 CA958006 |
1071 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA341292331 rs1180611893 |
1073 | A>T | No |
ClinGen gnomAD |
|
|
rs754788289 CA958002 |
1073 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368054254 CA958001 |
1074 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1029012582 CA26865556 |
1079 | D>N | No |
ClinGen Ensembl |
|
|
RCV001304115 rs1660531880 |
1081 | K>FVGDV | No |
ClinVar dbSNP |
|
|
RCV001350170 rs1660531924 |
1083 | V>E | No |
ClinVar dbSNP |
|
| TCGA novel | 1085 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1278743459 CA341292153 |
1087 | E>G | No |
ClinGen gnomAD |
|
|
rs1660531525 RCV001044286 |
1088 | P>L | No |
ClinVar dbSNP |
|
|
RCV000594984 rs1553190579 CA341292142 |
1088 | P>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1131691351 CA341292118 RCV000492921 |
1090 | S>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs761290184 CA957997 |
1092 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA957998 rs555116112 |
1092 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
RCV000085565 rs61752418 CA227100 |
1093 | D>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs752042614 CA957996 |
1094 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA957995 rs763267492 |
1096 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA26865486 rs891533398 |
1098 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA957992 rs776773510 |
1099 | S>L | No |
ClinGen ExAC gnomAD |
|
|
RCV001318842 rs1553190559 |
1100 | I>T | No |
ClinVar dbSNP |
|
|
rs572604704 RCV001206815 CA957990 |
1100 | I>V | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
rs143689372 RCV000482283 CA16617207 |
1102 | D>A | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001350832 rs143689372 CA26865409 |
1102 | D>G | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001208554 rs138641544 CA957988 COSM109399 |
1102 | D>N | skin [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs143689372 RCV001207400 CA957986 |
1102 | D>V | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA957987 VAR_084908 rs138641544 |
1102 | D>Y | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
CA341291943 rs1424302918 |
1103 | L>V | No |
ClinGen TOPMed |
|
|
CA957983 rs756731889 |
1106 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957984 rs750079068 |
1106 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA341291890 rs1557778162 |
1107 | Y>H | No |
ClinGen Ensembl |
|
|
rs1333006788 CA341291404 |
1110 | G>D | No |
ClinGen TOPMed |
|
|
CA341291833 rs1557778142 |
1110 | G>R | No |
ClinGen Ensembl |
|
|
rs1385693763 RCV001314356 CA341291367 |
1113 | I>V | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1166656768 CA341291352 |
1114 | I>L | No |
ClinGen gnomAD |
|
|
rs372948027 CA341291321 CA957957 |
1115 | M>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs376947008 CA957958 |
1115 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA957956 rs369440533 RCV001235193 |
1118 | H>Y | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA957954 rs762035001 |
1119 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs376831329 CA341291246 |
1120 | M>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs376831329 CA957953 |
1120 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA957952 rs146117512 |
1121 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA227114 rs61750123 RCV000085575 |
1122 | E>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 1123 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001295280 rs746647738 CA957949 |
1124 | D>E | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA957950 RCV001341345 rs770774738 |
1124 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA26863767 rs1047375 |
1125 | L>H | No |
ClinGen Ensembl |
|
|
rs1047376 CA26863766 |
1126 | L>H | No |
ClinGen TOPMed gnomAD |
|
|
RCV001342373 rs1660481292 |
1126 | L>V | No |
ClinVar dbSNP |
|
|
CA957947 rs369922919 |
1128 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA957948 rs777447834 |
1128 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779426136 CA957946 |
1129 | R>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
RCV000085577 rs61750124 |
1132 | I>missing | No |
ClinVar dbSNP |
|
|
rs754164108 CA957944 |
1134 | A>D | No |
ClinGen ExAC gnomAD |
|
|
RCV000412823 rs1057517701 CA16042404 |
1135 | Q>* | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
RCV001232943 rs1660480045 |
1136 | G>V | No |
ClinVar dbSNP |
|
|
rs765328414 RCV001302226 CA26863669 |
1137 | R>G | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA341290960 rs1470342715 |
1137 | R>K | No |
ClinGen TOPMed |
|
|
rs1287053724 RCV001268101 |
1138 | L>H | No |
ClinVar dbSNP |
|
|
CA957942 rs756605933 |
1141 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767894041 CA26863651 |
1143 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs767894041 CA957940 |
1143 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1313428356 CA341290887 |
1143 | T>P | No |
ClinGen TOPMed |
|
|
CA26863646 rs1047230065 |
1144 | P>S | No |
ClinGen TOPMed |
|
|
RCV001231338 rs1660479149 |
1145 | L>R | No |
ClinVar dbSNP |
|
|
rs61752420 RCV000085578 |
1146 | F>* | No |
ClinVar dbSNP |
|
| VAR_012566 | 1148 | K>T | No | UniProt | |
|
rs761915394 CA341290791 |
1149 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957939 rs761915394 |
1149 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375783686 CA341290769 |
1150 | C>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA957935 rs776603655 |
1155 | L>F | No |
ClinGen ExAC |
|
|
rs371833190 CA957936 |
1155 | L>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA957934 rs770686826 |
1156 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA341290620 rs1285919696 |
1158 | T>N | No |
ClinGen gnomAD |
|
|
rs747634650 CA957930 |
1160 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341290592 rs747634650 |
1160 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957929 rs553776104 RCV000523804 |
1161 | R>C | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
rs1361239964 CA341290540 |
1162 | K>M | No |
ClinGen gnomAD |
|
|
CA957926 rs780757270 |
1163 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA957925 rs756518126 |
1167 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA957924 rs776916571 |
1169 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957923 rs781521866 |
1170 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957922 rs757421299 |
1170 | R>K | Variant assessed as Somatic; 4.622e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA341290445 rs757421299 |
1170 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA26863521 rs975090023 |
1172 | G>D | No |
ClinGen Ensembl |
|
|
rs751595372 CA957921 |
1172 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1210484040 CA341290404 |
1173 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1446082893 CA341290387 |
1174 | E>G | No |
ClinGen gnomAD |
|
|
RCV000085581 rs62645954 |
1177 | C>missing | No |
ClinVar dbSNP |
|
|
RCV000085582 rs61750125 CA227122 |
1177 | C>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA957898 rs75267647 |
1183 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA341290146 rs1448698653 |
1183 | G>V | No |
ClinGen gnomAD |
|
|
CA341290104 rs1190228533 |
1186 | T>I | No |
ClinGen gnomAD |
|
|
RCV001316923 rs1266156413 CA341290098 |
1187 | T>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA26862309 rs1032514901 |
1187 | T>S | No |
ClinGen Ensembl |
|
|
CA957895 rs762511060 |
1188 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs370644803 CA26862278 |
1188 | C>S | No |
ClinGen TOPMed |
|
|
rs370644803 CA26862285 |
1188 | C>Y | No |
ClinGen TOPMed |
|
|
CA26862255 rs1025059311 |
1190 | A>D | No |
ClinGen Ensembl |
|
|
rs1340595876 CA341290059 |
1191 | H>N | No |
ClinGen gnomAD |
|
|
CA341290040 rs1370609179 |
1192 | V>A | No |
ClinGen gnomAD |
|
|
CA341290045 rs770363333 |
1192 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA341290031 rs374610040 |
1193 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777239290 RCV001211273 CA957892 |
1193 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA10586745 RCV000254062 RCV001370240 rs886038285 |
1194 | D>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341290026 rs1297633961 |
1194 | D>Y | No |
ClinGen gnomAD |
|
|
CA341289839 rs1323928773 |
1198 | E>Q | No |
ClinGen TOPMed |
|
|
rs137853898 CA228871 RCV000086932 |
1199 | Q>* | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs137853898 CA341289832 |
1199 | Q>K | No |
ClinGen gnomAD |
|
|
CA341289813 rs1196264082 |
1202 | D>N | No |
ClinGen gnomAD |
|
|
CA341289663 rs1570367456 |
1205 | V>I | No |
ClinGen Ensembl |
|
|
rs1267724855 CA341289651 |
1206 | N>H | No |
ClinGen gnomAD |
|
|
rs1331283717 CA341289635 |
1207 | E>D | No |
ClinGen gnomAD |
|
|
CA957866 RCV001309889 rs780950161 |
1207 | E>K | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs757221381 CA957865 |
1208 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1339763583 CA341289626 |
1209 | M>L | No |
ClinGen gnomAD |
|
|
rs767956362 CA26860294 |
1211 | V>I | No |
ClinGen Ensembl |
|
|
rs142882518 CA957861 |
1213 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA957860 rs759079505 |
1215 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001341791 rs1660366503 |
1215 | H>Q | No |
ClinVar dbSNP |
|
|
rs1660366419 RCV001207354 |
1216 | V>missing | No |
ClinVar dbSNP |
|
|
rs776212035 CA957859 |
1216 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs766740575 CA957858 |
1219 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA341289467 rs762213896 |
1224 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341289464 rs1397969767 |
1224 | C>Y | No |
ClinGen TOPMed |
|
|
rs1247681526 CA341289457 |
1225 | I>L | No |
ClinGen gnomAD |
|
|
rs1660365201 RCV001313114 |
1225 | I>T | No |
ClinVar dbSNP |
|
|
CA26860236 rs929411203 |
1226 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA341289445 rs1479936357 |
1226 | G>S | No |
ClinGen gnomAD |
|
|
rs149849017 CA957851 |
1229 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749258281 CA957849 |
1230 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA957850 rs768895720 |
1230 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1246772980 CA341289389 |
1231 | F>Y | No |
ClinGen gnomAD |
|
|
rs878939877 CA26860202 |
1232 | L>F | No |
ClinGen Ensembl |
|
|
rs61752422 CA957848 |
1235 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769819432 CA957847 |
1236 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs769819432 CA26860198 |
1236 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA341289296 rs1390307355 |
1237 | N>I | No |
ClinGen gnomAD |
|
|
rs1303664995 CA341289294 |
1237 | N>K | No |
ClinGen TOPMed |
|
|
rs746958360 CA341289275 CA957846 |
1238 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957845 rs777892957 |
1241 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA341289224 rs1389287812 |
1242 | A>T | No |
ClinGen gnomAD |
|
|
CA26860180 rs1036812400 |
1243 | Y>H | No |
ClinGen TOPMed |
|
|
rs1458777143 CA341289187 |
1244 | A>D | No |
ClinGen gnomAD |
|
|
CA957844 rs374303695 |
1244 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1389971564 CA341289176 |
1245 | S>N | No |
ClinGen gnomAD |
|
|
CA957843 rs370530559 |
1245 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA26860166 rs909796557 |
1248 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1249 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341289110 rs1451564181 |
1249 | E>Q | No |
ClinGen gnomAD |
|
|
CA341289053 rs61752423 |
1252 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957841 rs61752423 |
1252 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001236223 rs762125655 CA957837 |
1255 | A>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1015145323 CA26860138 |
1256 | D>H | No |
ClinGen Ensembl |
|
| TCGA novel | 1259 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774700576 CA957836 |
1260 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA957835 rs768807569 |
1260 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA341288854 rs1328821818 |
1260 | S>R | No |
ClinGen gnomAD |
|
|
CA341288757 rs1324890038 |
1263 | G>A | No |
ClinGen gnomAD |
|
|
rs531449824 CA26860118 |
1265 | S>C | No |
ClinGen Ensembl |
|
|
RCV001326120 rs763219678 CA957834 |
1267 | T>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1660360960 RCV001326260 |
1269 | L>R | No |
ClinVar dbSNP |
|
|
RCV001232792 rs1660360744 |
1271 | E>G | No |
ClinVar dbSNP |
|
|
rs281865514 RCV000085594 |
1274 | L>missing | No |
ClinVar dbSNP |
|
|
RCV001351169 CA957815 rs764435582 |
1274 | L>P | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA957814 rs764435582 |
1274 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1660349633 RCV001210443 |
1276 | V>missing | No |
ClinVar dbSNP |
|
|
rs1412990028 CA341288386 |
1276 | V>I | No |
ClinGen gnomAD |
|
|
rs1177320284 CA341288366 |
1277 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs374565343 COSM3419591 RCV001051888 CA957812 |
1277 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA341288369 rs1177320284 |
1277 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs759598051 CA957810 |
1278 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA341288339 rs1483964686 |
1279 | D>E | No |
ClinGen gnomAD |
|
|
RCV001248038 rs1660348024 |
1286 | F>missing | No |
ClinVar dbSNP |
|
|
rs370076001 CA26859763 |
1286 | F>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA957807 rs200439056 |
1287 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA957809 rs776866627 |
1287 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA957808 rs200439056 |
1287 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA957804 rs749060207 |
1288 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA341288204 rs749060207 |
1288 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA957781 RCV001300950 rs745511918 |
1289 | G>D | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs143576497 CA957779 COSM1344999 |
1290 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
RCV001347873 rs1660220944 |
1291 | Q>L | No |
ClinVar dbSNP |
|
|
rs61752426 CA227143 RCV000085597 |
1292 | Q>* | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs758846438 CA957777 |
1292 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341287839 rs1322658168 |
1294 | R>I | No |
ClinGen gnomAD |
|
|
rs1322658168 CA341287841 |
1294 | R>T | No |
ClinGen gnomAD |
|
|
CA341287836 rs1454362352 |
1295 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs200753584 CA957775 |
1297 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1183899256 CA341287791 |
1301 | H>Q | No |
ClinGen gnomAD |
|
|
rs1168052786 CA341287788 |
1302 | P>S | No |
ClinGen TOPMed |
|
|
rs946827466 CA26855633 |
1303 | C>S | No |
ClinGen gnomAD |
|
|
CA26855628 rs913904785 |
1304 | L>F | No |
ClinGen Ensembl |
|
|
rs750473426 CA957772 |
1305 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1660219342 RCV001232851 |
1305 | G>S | No |
ClinVar dbSNP |
|
| TCGA novel | 1306 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764034837 CA957771 |
1308 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1485892324 CA341287752 |
1308 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1485892324 CA341287753 |
1308 | E>Q | No |
ClinGen gnomAD |
|
|
CA341287735 rs775563920 |
1310 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs775563920 CA957769 |
1310 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1311 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1660218703 RCV001068563 |
1312 | Q>missing | No |
ClinVar dbSNP |
|
|
rs759373941 CA957767 |
1312 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341287727 rs1390442032 |
1312 | Q>K | No |
ClinGen TOPMed |
|
|
CA341287709 rs1300088198 |
1313 | T>P | No |
ClinGen gnomAD |
|
|
CA227150 VAR_008442 rs61754041 RCV000085601 |
1314 | P>T | No |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
|
CA957765 rs746468013 |
1316 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1291821062 CA341287673 |
1316 | D>Y | No |
ClinGen gnomAD |
|
|
rs960704174 CA26855532 RCV001227567 |
1318 | N>S | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs1428867662 CA341287642 |
1319 | V>I | No |
ClinGen gnomAD |
|
|
CA957763 rs771682963 |
1320 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs1440926208 CA341287625 |
1320 | C>S | No |
ClinGen TOPMed |
|
|
CA957761 rs779524552 RCV001304451 |
1321 | S>F | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs755345494 CA957760 |
1322 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1660217584 RCV001059570 |
1324 | A>missing | No |
ClinVar dbSNP |
|
|
rs369361520 CA957758 |
1324 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341287592 rs1490986516 |
1324 | A>T | No |
ClinGen gnomAD |
|
|
CA957756 rs371582683 |
1325 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA341287567 rs761989194 |
1326 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA341287551 rs1571265278 |
1328 | H>P | No |
ClinGen Ensembl |
|
| TCGA novel | 1329 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1571265271 CA341287530 |
1330 | E>G | No |
ClinGen Ensembl |
|
|
rs1221005102 CA341287510 |
1332 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs368413231 CA957751 |
1333 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1660216238 RCV001345319 |
1333 | P>TPEPECQP | No |
ClinVar dbSNP |
|
|
rs770774620 RCV001211644 CA957749 |
1334 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA341287486 rs1194460760 |
1335 | P>T | No |
ClinGen TOPMed |
|
|
rs772961093 RCV001337335 |
1336 | E>D | No |
ClinVar dbSNP |
|
|
rs760242485 CA957748 |
1336 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957746 rs771461979 |
1339 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs779248561 CA957744 |
1341 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM145036 rs981447805 CA26855410 |
1342 | P>L | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1245239494 CA341287402 |
1343 | Q>H | No |
ClinGen gnomAD |
|
|
CA957742 rs749605584 |
1344 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253110874 CA341287142 |
1345 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA957740 rs780550919 |
1346 | T>M | No |
ClinGen ExAC gnomAD |
|
|
RCV000085603 rs61751401 |
1347 | G>missing | No |
ClinVar dbSNP |
|
|
rs1354759338 CA341287122 |
1347 | G>R | No |
ClinGen TOPMed |
|
|
CA16617204 RCV000483648 rs1064793012 |
1350 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs751689141 CA957735 |
1355 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs994570602 CA26855366 |
1356 | Q>P | No |
ClinGen gnomAD |
|
|
CA341286986 rs552517556 RCV000761667 |
1357 | A>E | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
CA957732 rs552517556 |
1357 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs552517556 RCV001244465 |
1357 | A>V | No |
ClinVar dbSNP |
|
|
CA227155 rs61752429 RCV000085604 |
1358 | L>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1660213080 RCV001325776 |
1360 | V>D | No |
ClinVar dbSNP |
|
| TCGA novel | 1361 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1571265149 CA341286900 |
1363 | F>S | No |
ClinGen Ensembl |
|
|
rs1571265141 CA341286849 |
1365 | H>P | No |
ClinGen Ensembl |
|
|
CA957728 rs767232026 |
1366 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1054210292 CA26855343 |
1367 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1054210292 CA341286807 |
1367 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1183074086 CA341286794 |
1368 | R>G | No |
ClinGen gnomAD |
|
|
CA957727 COSM1320833 rs761163530 |
1368 | R>H | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA957726 rs774010684 |
1371 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA341286742 rs1205837857 |
1373 | F>I | No |
ClinGen gnomAD |
|
|
rs1267585230 CA341286706 |
1375 | A>E | No |
ClinGen gnomAD |
|
| TCGA novel | 1375 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1267585230 CA341286705 RCV000522465 |
1375 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
CA957703 rs145681797 |
1377 | I>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1389129096 CA341286506 |
1378 | V>A | No |
ClinGen gnomAD |
|
|
rs1660190269 RCV001063512 |
1379 | L>P | No |
ClinVar dbSNP |
|
|
rs543127423 CA957699 |
1381 | A>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs543127423 CA341286466 |
1381 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1660189911 RCV001230206 |
1382 | T>I | No |
ClinVar dbSNP |
|
|
rs758424704 CA341286409 |
1385 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs758424704 CA957697 |
1385 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA957696 rs576119077 |
1387 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs750384181 CA957694 |
1390 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA341286311 rs1353754487 |
1391 | S>F | No |
ClinGen TOPMed |
|
|
rs757042025 CA957693 |
1393 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26854945 rs1045163391 |
1393 | V>I | No |
ClinGen TOPMed |
|
|
rs1047379 CA26854942 |
1395 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
COSM1688055 CA341286288 rs1489868696 |
1395 | P>S | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA957692 rs751233838 COSM682658 |
1397 | F>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA957689 rs765601410 |
1399 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA341286222 rs1305455299 |
1401 | P>A | No |
ClinGen gnomAD |
|
|
CA341286220 rs1305455299 |
1401 | P>S | No |
ClinGen gnomAD |
|
|
rs554101094 CA957687 |
1402 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
RCV001237651 CA26854928 rs554101094 |
1402 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001324844 rs1660186858 |
1406 | H>R | No |
ClinVar dbSNP |
|
|
RCV000487474 rs1064797091 CA16617203 |
1407 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs61750134 RCV001067225 |
1408 | W>* | No |
ClinVar dbSNP |
|
|
RCV001247691 rs1660186211 |
1410 | Y>D | No |
ClinVar dbSNP |
|
|
rs61750136 RCV000085615 |
1411 | G>missing | No |
ClinVar dbSNP |
|
|
rs1477065041 CA341286103 |
1411 | G>E | No |
ClinGen gnomAD |
|
|
rs779039734 CA957683 |
1411 | G>W | No |
ClinGen ExAC gnomAD |
|
|
CA341286075 rs1201535434 RCV001069800 |
1413 | Q>H | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA341286039 rs1480701186 |
1416 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
RCV001091947 rs1467000353 |
1417 | F>missing | No |
ClinVar dbSNP |
|
|
rs768684057 CA957682 |
1417 | F>L | No |
ClinGen ExAC |
|
|
rs1450732484 CA341285923 |
1422 | P>Q | No |
ClinGen gnomAD |
|
|
CA957661 rs754474720 |
1424 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA957660 rs753292940 |
1424 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753292940 CA341285903 |
1424 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341285878 rs1248210975 |
1426 | Q>L | No |
ClinGen gnomAD |
|
|
rs1156808600 CA341285849 |
1429 | V>L | No |
ClinGen gnomAD |
|
|
CA957658 rs534072417 |
1430 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs774582644 CA957655 |
1438 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1571264075 CA341285715 |
1442 | N>T | No |
ClinGen Ensembl |
|
|
CA957651 rs533422156 |
1443 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA957652 rs533422156 |
1443 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 1444 | C>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs142506651 CA957650 RCV000594447 |
1448 | G>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA227186 rs61750143 RCV000085632 |
1449 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
rs747928913 CA957649 COSM913447 |
1451 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs752920435 CA957620 |
1456 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs759626083 CA957618 |
1459 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26853764 rs373181448 |
1460 | P>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
RCV001091945 rs1347261858 |
1461 | W>* | No |
ClinVar dbSNP |
|
|
CA957617 rs753984595 |
1461 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs924936585 CA26853736 |
1463 | T>N | No |
ClinGen TOPMed |
|
|
CA957616 RCV001204917 rs113134400 |
1463 | T>P | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs113134400 CA26853759 |
1463 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA957615 rs761652443 RCV001245957 |
1464 | P>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA957614 rs774388826 |
1465 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1298578408 CA341285238 |
1465 | S>P | No |
ClinGen TOPMed |
|
|
CA341285217 rs1341069538 |
1466 | V>G | No |
ClinGen TOPMed |
|
|
CA341285221 rs1315143020 |
1466 | V>L | No |
ClinGen TOPMed |
|
|
rs1239531373 CA341285209 |
1467 | S>F | No |
ClinGen TOPMed |
|
| TCGA novel | 1467 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341285205 rs775082837 RCV001308502 |
1468 | P>A | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA341285199 rs1557772284 |
1468 | P>L | No |
ClinGen Ensembl |
|
|
CA957612 rs775082837 |
1468 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs769441167 CA957611 |
1469 | N>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs745321062 CA957610 |
1469 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745321062 CA341285193 |
1469 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341285182 rs1482496499 |
1470 | I>V | No |
ClinGen TOPMed |
|
|
CA341285172 rs1571263473 |
1471 | T>P | No |
ClinGen Ensembl |
|
|
CA957607 rs747439462 |
1474 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA341285108 rs1224522600 |
1476 | K>E | No |
ClinGen Ensembl |
|
|
rs794727531 CA346872 RCV000177441 |
1477 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA957605 rs758653947 |
1477 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs1660139846 RCV001205033 |
1479 | W>* | No |
ClinVar dbSNP |
|
|
rs1205633762 CA341285024 |
1480 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA957604 rs753120354 |
1481 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA957603 rs779222666 |
1482 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs764121941 CA957600 |
1489 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751402865 CA957601 |
1489 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs61750148 CA26853524 |
1490 | C>R | No |
ClinGen TOPMed |
|
|
rs61750148 RCV000085640 CA227196 |
1490 | C>S | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs1157937249 CA341284932 |
1491 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA957598 rs765070402 |
1493 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1365918183 CA341284910 |
1493 | R>K | No |
ClinGen gnomAD |
|
|
CA26853506 rs200156177 |
1493 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs745454563 CA341284902 |
1494 | E>* | No |
ClinGen TOPMed |
|
|
rs745454563 CA26853503 |
1494 | E>K | No |
ClinGen TOPMed |
|
|
rs1444297329 CA341284879 |
1496 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1038083678 CA26853493 |
1500 | P>S | No |
ClinGen Ensembl |
|
|
rs888059763 CA26853486 |
1501 | E>* | No |
ClinGen TOPMed |
|
|
RCV000905492 CA957596 rs143272984 |
1501 | E>D | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV000085642 CA227199 rs61750149 |
1502 | C>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1365368443 CA341284826 |
1502 | C>S | No |
ClinGen gnomAD |
|
|
rs773529178 CA957594 |
1505 | G>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1505 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341284801 rs1243394849 |
1506 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA957593 rs147292831 |
1506 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs568792949 CA957591 |
1507 | G>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1444784969 CA341284792 |
1508 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 1509 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000596575 CA957587 rs756106154 |
1510 | P>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs780343543 CA957588 |
1510 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs886046564 RCV001062597 |
1511 | P>R | No |
ClinVar dbSNP |
|
|
rs1316934987 CA341284774 |
1511 | P>S | No |
ClinGen gnomAD |
|
|
rs61750150 CA957584 RCV001038496 |
1512 | P>H | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs61750150 CA957583 |
1512 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957581 rs759373898 |
1513 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
RCV001348500 rs759373898 |
1513 | Q>K | No |
ClinVar dbSNP |
|
| rs281865377 | 1513 | Q>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs281865377 | 1513 | Q>R | Variant assessed as Somatic; 7.018e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341284746 rs1446835802 |
1515 | T>A | No |
ClinGen TOPMed |
|
|
CA957561 rs201523394 |
1517 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201523394 CA341284732 |
1517 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA957560 rs750087624 |
1518 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs115859773 CA341284720 |
1519 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA957559 rs115859773 RCV001055840 |
1519 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| TCGA novel | 1521 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26846918 rs778488329 |
1526 | T>A | No |
ClinGen Ensembl |
|
|
rs1475557615 CA341284669 |
1527 | D>E | No |
ClinGen TOPMed |
|
|
rs1016502784 CA26846906 |
1527 | D>V | No |
ClinGen Ensembl |
|
|
CA26846900 rs945597194 |
1528 | R>G | No |
ClinGen TOPMed |
|
|
rs141395755 CA957555 |
1528 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341284659 rs1285652480 |
1529 | N>T | No |
ClinGen gnomAD |
|
|
CA341284650 rs1335441037 |
1530 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
RCV001345312 rs1659998732 |
1534 | L>W | No |
ClinVar dbSNP |
|
|
CA341284605 rs1401129783 |
1537 | T>P | No |
ClinGen gnomAD |
|
|
rs1659997368 RCV001045023 |
1538 | Y>missing | No |
ClinVar dbSNP |
|
|
rs754897752 CA957550 |
1538 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1427105205 CA341284597 |
1538 | Y>C | No |
ClinGen gnomAD |
|
|
rs1427105205 RCV001318556 |
1538 | Y>F | No |
ClinVar dbSNP |
|
|
CA341284592 rs753785442 |
1539 | P>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1539 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753785442 CA957549 |
1539 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1287179107 CA341284588 |
1540 | A>T | No |
ClinGen TOPMed |
|
|
CA341284580 rs1333842736 |
1541 | L>H | No |
ClinGen TOPMed |
|
|
rs779872369 CA957548 |
1541 | L>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001213604 CA957547 rs374921762 |
1542 | I>T | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1228267641 CA341284576 |
1542 | I>V | No |
ClinGen gnomAD |
|
|
rs750046422 CA957546 RCV001067867 |
1544 | S>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1131691612 RCV000493820 CA341284271 CA341284273 |
1546 | L>* | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA341284256 rs1211477643 |
1548 | S>G | No |
ClinGen gnomAD |
|
|
rs750192063 CA957528 RCV001337910 |
1548 | S>N | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA341284248 rs1282667368 |
1548 | S>R | No |
ClinGen gnomAD |
|
|
CA341284220 rs1225825438 |
1551 | W>* | No |
ClinGen gnomAD |
|
|
CA341284215 rs1340746441 |
1551 | W>C | No |
ClinGen Ensembl |
|
|
RCV001242101 CA341284192 rs1354737408 |
1553 | N>K | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs780931193 CA957527 |
1555 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
RCV001208610 CA341284164 rs1385119665 |
1556 | R>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1401716074 VAR_084933 CA341284080 |
1557 | Y>C | found in a patient with chorioretinal atrophy; unknown pathological significance [UniProt] | No |
ClinGen UniProt dbSNP gnomAD |
|
RCV001244518 rs1659914486 |
1561 | S>missing | No |
ClinVar dbSNP |
|
|
rs1329136643 CA341284031 |
1562 | I>M | No |
ClinGen gnomAD |
|
|
rs1360967221 CA341284038 |
1562 | I>V | No |
ClinGen gnomAD |
|
|
CA341284008 rs1221076968 |
1565 | K>R | No |
ClinGen TOPMed |
|
|
CA957509 rs752150372 |
1567 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA957510 rs752150372 |
1567 | P>R | No |
ClinGen ExAC gnomAD |
|
|
RCV001324746 CA957511 rs777311970 |
1567 | P>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1416704262 CA341283979 |
1568 | V>G | No |
ClinGen gnomAD |
|
|
CA957506 RCV001294800 rs373023236 |
1569 | V>I | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs373023236 CA957507 |
1569 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1489630277 CA341283964 |
1570 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA957505 rs766707707 |
1570 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
RCV000085665 rs281865381 |
1571 | I>missing | No |
ClinVar dbSNP |
|
|
CA957504 rs761054421 |
1571 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs185093512 CA341283947 |
1572 | T>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA227228 RCV000085666 rs62641255 |
1572 | T>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs774279555 CA957500 |
1573 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA341283936 rs1282472315 |
1574 | E>* | No |
ClinGen gnomAD |
|
|
CA341283933 rs1557768944 |
1574 | E>A | No |
ClinGen Ensembl |
|
|
CA957499 rs768843191 |
1575 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs779572379 CA957498 |
1576 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341283916 rs779572379 |
1576 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757975622 CA957494 |
1581 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA341283857 rs539124923 |
1581 | S>R | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
| TCGA novel | 1582 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA26845237 rs963091295 |
1583 | L>I | No |
ClinGen TOPMed |
|
|
rs1557768890 CA341283833 |
1584 | G>S | No |
ClinGen Ensembl |
|
|
rs754298400 RCV000177682 COSM3741441 CA244215 |
1585 | R>Q | liver [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA16603705 RCV000422838 rs745512565 |
1585 | R>W | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA957492 rs780574858 |
1586 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1318570138 CA341283818 |
1586 | I>V | No |
ClinGen gnomAD |
|
|
CA341283809 rs1313766882 |
1587 | M>L | No |
ClinGen gnomAD |
|
|
rs374931802 CA957490 |
1587 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341283793 rs1571258380 |
1588 | N>Y | No |
ClinGen Ensembl |
|
|
CA26845221 rs568632498 |
1590 | S>N | No |
ClinGen 1000Genomes |
|
|
RCV000512709 rs1472640519 CA341283762 |
1591 | G>E | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA341283719 RCV001058053 rs1425552175 |
1592 | G>D | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA957463 rs751683384 |
1593 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1659903133 RCV001210757 |
1595 | T>A | No |
ClinVar dbSNP |
|
|
rs1051609068 CA341283692 |
1595 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA26845044 rs1051609068 |
1595 | T>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1595 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1216892888 CA341283683 |
1597 | E>K | No |
ClinGen gnomAD |
|
|
rs1216892888 CA341283684 |
1597 | E>Q | No |
ClinGen gnomAD |
|
|
rs1281982868 CA341283676 |
1598 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA341283671 rs1441888355 |
1599 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA957460 rs765481184 |
1600 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1308726614 CA341283649 |
1602 | I>V | No |
ClinGen TOPMed |
|
|
CA957459 rs773251303 |
1603 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957458 rs773251303 |
1603 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs919216834 CA26845035 |
1603 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1299117797 CA341283632 |
1605 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1363935972 CA341283627 |
1605 | F>L | No |
ClinGen gnomAD |
|
|
rs1299117797 CA341283631 |
1605 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs771717115 CA957457 |
1605 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA957456 rs761702897 |
1606 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1659901149 RCV001211274 |
1606 | L>P | No |
ClinVar dbSNP |
|
|
RCV001211275 CA26845013 rs151145662 |
1608 | H>R | No |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
|
rs889448722 CA26845008 |
1610 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs756121599 CA26844995 |
1612 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA341283580 rs1476762749 RCV001234072 |
1613 | D>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
| TCGA novel | 1616 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1616 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA235748 RCV000171155 rs786205446 |
1618 | W>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
| VAR_084936 | 1618 | W>del | No | UniProt | |
|
CA341283231 rs1320443166 |
1619 | F>V | No |
ClinGen TOPMed |
|
|
rs1659893012 RCV001230563 |
1620 | N>I | No |
ClinVar dbSNP |
|
|
CA957437 rs762559154 |
1620 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA957436 rs775170464 |
1621 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
RCV000085679 CA227246 rs61750157 |
1623 | G>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1571257969 CA341283199 VAR_084937 RCV000994039 |
1623 | G>V | unknown pathological significance [UniProt] | No |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA227248 rs61752440 RCV000085680 |
1625 | H>Q | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA26844877 rs972980821 |
1625 | H>R | No |
ClinGen Ensembl |
|
|
rs761852336 CA26844872 |
1626 | A>G | No |
ClinGen Ensembl |
|
|
CA341283169 rs1557768562 |
1628 | V>A | No |
ClinGen Ensembl |
|
|
CA341283166 rs1251460797 |
1629 | S>G | No |
ClinGen TOPMed |
|
|
rs1401059317 CA341283161 |
1629 | S>R | No |
ClinGen gnomAD |
|
|
rs1659891925 RCV001351774 |
1630 | F>S | No |
ClinVar dbSNP |
|
|
CA957433 rs745413308 |
1632 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1422814365 CA341283130 |
1634 | A>G | No |
ClinGen gnomAD |
|
|
RCV000596212 rs1553188613 CA341283131 |
1634 | A>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341283129 rs1422814365 |
1634 | A>V | No |
ClinGen gnomAD |
|
|
CA341283121 rs1571257903 |
1635 | H>Q | No |
ClinGen Ensembl |
|
|
rs1458733281 CA341283094 |
1639 | L>F | No |
ClinGen gnomAD |
|
|
CA341283092 rs61751404 |
1640 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1261008142 CA341283088 |
1641 | A>T | No |
ClinGen TOPMed |
|
|
rs753969320 CA957428 |
1643 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs757217216 CA957425 |
1645 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1314399132 CA341283054 |
1646 | D>E | No |
ClinGen gnomAD |
|
|
rs903548005 CA26844838 |
1646 | D>Y | No |
ClinGen Ensembl |
|
|
CA957424 rs751534907 |
1647 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1165272649 CA341283043 |
1648 | S>N | No |
ClinGen TOPMed |
|
|
rs1335975904 CA341283036 |
1649 | P>R | No |
ClinGen gnomAD |
|
|
rs61750159 RCV000085686 |
1650 | E>missing | No |
ClinVar dbSNP |
|
|
rs762754528 RCV001091941 CA957422 |
1650 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001300543 COSM1688053 CA957421 rs775080600 |
1651 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA227259 RCV000085688 rs61750561 |
1652 | Y>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV001239417 COSM230452 CA957419 rs758912686 RCV001587268 |
1656 | V>I | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA341282994 rs758912686 |
1656 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341282985 rs1472135045 |
1657 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
RCV001222600 rs1659887933 |
1658 | S>R | No |
ClinVar dbSNP |
|
|
rs776189664 CA957418 |
1658 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs149324169 CA957417 |
1659 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1571257802 CA341282971 |
1659 | Q>H | No |
ClinGen Ensembl |
|
|
rs149324169 CA341282975 |
1659 | Q>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1293572527 CA341282952 |
1662 | N>K | No |
ClinGen TOPMed |
|
|
rs1571257788 CA341282949 TCGA novel |
1663 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
rs773880325 RCV001247308 CA957416 |
1666 | E>* | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs200443984 CA957414 |
1666 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA957415 RCV001312651 rs773880325 |
1666 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1056269972 CA26844798 |
1667 | Q>H | No |
ClinGen Ensembl |
|
|
rs61753018 RCV000085689 CA227261 |
1667 | Q>K | No |
ClinGen ClinVar ExAC TOPMed dbSNP |
|
|
rs779222611 CA957413 |
1667 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1291211325 CA341282920 |
1668 | L>F | No |
ClinGen gnomAD |
|
|
CA957412 rs768914472 |
1669 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957411 rs749543290 |
1671 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341282893 rs1489817062 |
1672 | T>I | No |
ClinGen gnomAD |
|
|
CA957409 rs756194251 |
1673 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs375156009 CA957389 |
1675 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs375156009 CA957390 RCV001067374 |
1675 | T>S | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA341282862 rs1198088902 |
1676 | T>I | No |
ClinGen gnomAD |
|
|
CA26844070 rs888733588 |
1678 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
RCV001064188 rs1659845637 |
1678 | V>M | No |
ClinVar dbSNP |
|
|
rs760206966 CA957385 |
1679 | D>N | No |
ClinGen ExAC gnomAD |
|
|
COSM329102 CA341282821 rs1402394753 |
1683 | A>V | Variant assessed as Somatic; impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs769711425 CA26844062 |
1684 | I>N | No |
ClinGen gnomAD |
|
|
CA341282809 rs1217176859 |
1685 | C>Y | No |
ClinGen gnomAD |
|
|
CA957382 rs6681879 |
1686 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA26844051 rs6681879 |
1686 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA957381 rs201996979 |
1687 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1243438233 CA341282790 |
1688 | F>L | No |
ClinGen TOPMed |
|
|
RCV001312716 rs1333985048 CA341282780 |
1690 | M>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
rs1659842921 RCV001319029 |
1695 | A>D | No |
ClinVar dbSNP |
|
|
CA341282744 rs1424418191 |
1696 | S>G | No |
ClinGen gnomAD |
|
|
rs61750564 CA957378 |
1696 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957377 rs776687457 |
1697 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341282723 rs1178161569 |
1699 | L>F | No |
ClinGen gnomAD |
|
|
rs1456520760 CA341282703 |
1702 | I>V | No |
ClinGen gnomAD |
|
|
rs1044818989 COSM221282 CA341282679 |
1706 | V>L | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1044818989 CA26844010 |
1706 | V>M | No |
ClinGen gnomAD |
|
|
RCV000498790 rs778747291 CA957374 |
1710 | K>Q | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 1710 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754737758 CA957373 |
1711 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs560385739 CA957372 |
1711 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA341282639 rs1407166926 |
1712 | L>F | No |
ClinGen TOPMed |
|
|
CA957370 rs755826006 |
1713 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1012443608 CA26843987 |
1714 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1448246859 CA341282604 RCV001306828 |
1717 | G>E | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA341282593 rs1301504030 |
1719 | S>I | No |
ClinGen gnomAD |
|
|
CA341282595 rs1402117430 |
1719 | S>R | No |
ClinGen gnomAD |
|
|
rs781126638 CA26843983 |
1720 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781126638 CA957369 |
1720 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000994037 rs1571256634 CA341282559 |
1724 | W>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA957367 rs756847090 |
1725 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1419636627 CA341282544 |
1726 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1419636627 CA341282546 |
1726 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA957365 rs764510820 |
1727 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA957366 rs201657029 |
1727 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1280693634 CA341282527 |
1729 | L>F | No |
ClinGen gnomAD |
|
|
CA957364 rs200037640 |
1731 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| rs940382049 | 1732 | I>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341281807 rs1193466111 CA341281810 |
1733 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA26842569 rs866788020 |
1736 | S>F | No |
ClinGen Ensembl |
|
|
CA957343 rs761017794 |
1737 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000085711 rs281865403 |
1738 | S>missing | No |
ClinVar dbSNP |
|
|
CA244860 rs794727593 RCV000177895 |
1740 | G>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341281734 rs1320450199 |
1740 | G>W | No |
ClinGen gnomAD |
|
|
RCV000085713 rs61750570 |
1742 | V>missing | No |
ClinVar dbSNP |
|
|
rs1468259749 CA341281726 |
1742 | V>M | No |
ClinGen gnomAD |
|
|
rs1302819174 CA341281716 |
1743 | V>A | No |
ClinGen TOPMed |
|
|
rs769668293 CA957338 |
1745 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341281706 rs1232880489 |
1745 | I>N | No |
ClinGen gnomAD |
|
|
CA957339 RCV001351989 rs775593910 |
1745 | I>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs377680438 CA957336 |
1747 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745658425 CA957337 |
1747 | I>V | No |
ClinGen ExAC TOPMed |
|
|
rs1659719374 RCV001209313 |
1748 | G>E | No |
ClinVar dbSNP |
|
|
rs61753025 CA957334 |
1748 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs61753026 RCV000085715 CA227291 |
1750 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341281670 rs1330632924 |
1751 | K>E | No |
ClinGen gnomAD |
|
|
rs757975876 CA957333 |
1752 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA341281651 RCV001212363 rs1249295549 |
1753 | A>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs1477513571 CA341281629 |
1757 | P>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1758 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1571254059 CA341281614 |
1759 | N>T | No |
ClinGen Ensembl |
|
|
rs755278800 CA957330 |
1760 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1454355504 CA341281604 |
1761 | P>S | No |
ClinGen gnomAD |
|
|
rs61753027 RCV000085717 |
1761 | P>missing | No |
ClinVar dbSNP |
|
|
rs121909206 CA341281595 |
1762 | A>V | Cone-rod dystrophy 3 (cord3) [Ensembl] | No |
ClinGen gnomAD |
|
rs1434692591 CA341281578 |
1765 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA341281561 rs1274228304 |
1769 | L>M | No |
ClinGen gnomAD |
|
|
rs760780770 CA957327 |
1770 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957326 rs750709182 |
1771 | G>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001201922 rs1659674437 |
1773 | A>missing | No |
ClinVar dbSNP |
|
|
RCV001209926 VAR_084943 rs760549861 |
1773 | A>E | found in a patient with chorioretinal atrophy; unknown pathological significance; severely decreases solubility; loss of cytoplasmic vesicle localization; decreases basal ATPase activity below 50%; loss of N-Ret-PE-induced stimulation in ATPase activity [UniProt] | No |
ClinVar dbSNP UniProt |
|
rs1472064768 CA341281526 |
1773 | A>S | No |
ClinGen gnomAD |
|
|
CA26842140 rs927897822 |
1774 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA227300 rs281865404 RCV000085722 |
1776 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs773822474 CA957298 |
1777 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1354160676 CA341281496 |
1778 | M>I | No |
ClinGen gnomAD |
|
|
rs768206358 CA957297 |
1778 | M>L | No |
ClinGen ExAC gnomAD |
|
|
RCV001305960 rs748706582 |
1778 | M>R | No |
ClinVar dbSNP |
|
|
rs748706582 CA957296 |
1778 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA341281486 rs121909207 |
1780 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341281459 rs746252741 |
1784 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs781464157 CA957293 |
1786 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA341281422 rs1420614924 |
1790 | T>S | No |
ClinGen gnomAD |
|
|
CA916237162 rs1553187929 |
1791 | A>L | No |
ClinGen TOPMed |
|
|
CA341281407 rs1166219309 |
1792 | Y>S | No |
ClinGen gnomAD |
|
|
CA341281384 rs1275948044 |
1796 | S>A | No |
ClinGen TOPMed |
|
|
rs753678303 CA957289 |
1797 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs202199507 CA341281341 |
1802 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs974596881 CA26842102 |
1802 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA26842098 rs868338484 |
1803 | G>D | No |
ClinGen Ensembl |
|
|
rs755666756 RCV001232518 CA26842100 COSM1181248 |
1803 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar TOPMed dbSNP gnomAD |
|
rs1659671020 RCV001305964 |
1806 | S>N | No |
ClinVar dbSNP |
|
|
rs761435921 CA957285 |
1807 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26842095 rs1004237594 |
1808 | A>G | No |
ClinGen gnomAD |
|
|
rs1004237594 CA341281303 |
1808 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1395978584 CA341281301 |
1809 | I>V | No |
ClinGen gnomAD |
|
|
CA341281295 rs1440037162 |
1810 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1327166984 CA341281291 |
1810 | T>I | No |
ClinGen gnomAD |
|
|
CA26842093 rs955581838 |
1811 | F>L | No |
ClinGen Ensembl |
|
|
CA957284 rs774018249 |
1812 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341281257 rs1172983360 |
1815 | L>S | No |
ClinGen gnomAD |
|
|
CA341281259 rs1398632105 |
1815 | L>V | No |
ClinGen gnomAD |
|
| VAR_012597 | 1817 | E>D | No | UniProt | |
|
CA957283 rs768118386 |
1818 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs748806015 CA341281222 |
1820 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957281 rs62646875 |
1820 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs748806015 CA957282 |
1820 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957244 rs774891564 |
1821 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26838310 rs1013900084 |
1824 | R>G | No |
ClinGen Ensembl |
|
| TCGA novel | 1826 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1688052 CA341281174 rs1417966624 |
1826 | N>S | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA341281170 rs530098237 |
1827 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957237 rs777210277 |
1828 | V>E | No |
ClinGen ExAC |
|
|
CA957238 rs200297761 COSM1181246 |
1828 | V>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs773682021 CA957234 |
1830 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA341281127 rs1443219544 |
1834 | I>M | No |
ClinGen TOPMed |
|
|
CA957232 rs748355733 |
1834 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181104943 CA341281126 |
1835 | V>F | No |
ClinGen TOPMed |
|
|
CA957229 rs749345027 |
1836 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs370698226 CA957230 |
1836 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000994035 rs1571250077 CA341281109 |
1837 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1321639616 CA341281112 |
1837 | P>T | No |
ClinGen gnomAD |
|
|
rs946348819 CA26838261 |
1840 | C>F | No |
ClinGen TOPMed gnomAD |
|
|
rs946348819 RCV001315371 |
1840 | C>Y | No |
ClinVar dbSNP |
|
|
CA26838254 rs201843632 |
1842 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs201843632 CA957226 |
1842 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA341281080 rs62642576 |
1843 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA957225 rs777519184 |
1843 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA26838238 rs531109296 |
1852 | Q>E | No |
ClinGen 1000Genomes |
|
|
rs374687000 CA26838232 |
1854 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367565445 CA26838227 |
1855 | T>I | No |
ClinGen gnomAD |
|
|
rs367565445 CA341281008 |
1855 | T>K | No |
ClinGen gnomAD |
|
|
CA957221 rs766026374 |
1858 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1048710159 CA26838220 |
1859 | A>G | No |
ClinGen Ensembl |
|
|
RCV001308039 rs761240030 CA957220 |
1860 | R>Q | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA26838213 rs200849015 |
1860 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA26838075 rs565564468 |
1862 | G>D | No |
ClinGen Ensembl |
|
|
rs774570747 CA957199 RCV001337202 |
1863 | E>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs775714847 CA957196 |
1866 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs769828014 CA957195 |
1866 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1038356365 CA26838050 |
1870 | F>S | No |
ClinGen TOPMed |
|
|
CA957192 rs748184137 |
1872 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs1362270708 CA341280896 |
1872 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
rs748907485 CA957190 |
1873 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957191 rs778550733 |
1873 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1439852249 CA341280858 |
1877 | K>N | No |
ClinGen gnomAD |
|
|
RCV001230624 rs369973540 |
1881 | A>D | No |
ClinVar dbSNP |
|
|
rs62642577 RCV000085745 CA227325 |
1882 | M>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs932230306 CA26838019 |
1883 | V>M | No |
ClinGen Ensembl |
|
|
CA341280812 rs1471999709 |
1885 | E>D | No |
ClinGen TOPMed |
|
|
rs764320529 CA341280805 |
1887 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764320529 RCV000426578 CA957182 |
1887 | V>M | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA26838000 rs960046683 |
1888 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1659523810 RCV001318690 |
1889 | Y>N | No |
ClinVar dbSNP |
|
|
CA341280786 rs1422282959 |
1890 | F>V | No |
ClinGen gnomAD |
|
|
rs1357586196 CA341280763 |
1894 | L>V | No |
ClinGen TOPMed |
|
|
CA341280756 rs1265846081 |
1895 | L>P | No |
ClinGen gnomAD |
|
|
rs759813536 CA957180 |
1896 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957179 rs759813536 |
1896 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957177 VAR_085025 RCV001311639 rs201357151 |
1898 | R>C | does not affect solubility; does not affect location in cytoplasmic vesicle; does not affect both basal and N-Ret-PE-stimulated ATPase activity [UniProt] | No |
ClinGen ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA341280737 rs1282177135 |
1899 | H>D | No |
ClinGen gnomAD |
|
|
CA341280734 rs1222067045 |
1899 | H>R | No |
ClinGen gnomAD |
|
|
CA341280712 rs1290742522 |
1902 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs865939248 CA26837331 |
1905 | W>* | No |
ClinGen Ensembl |
|
| TCGA novel | 1905 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs949868061 CA26837328 |
1907 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA26837324 rs913381989 |
1907 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs543742946 CA957127 |
1908 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA26837320 rs543742946 |
1908 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1443256833 CA341280516 |
1910 | T>I | No |
ClinGen gnomAD |
|
|
rs974288771 CA26837317 |
1912 | E>G | No |
ClinGen gnomAD |
|
|
RCV001221851 rs145299063 CA957126 |
1912 | E>K | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1557762858 CA341280473 |
1914 | I>T | No |
ClinGen Ensembl |
|
|
rs188889364 CA26837313 |
1915 | V>A | No |
ClinGen 1000Genomes |
|
|
CA341280458 rs1477910485 |
1916 | D>H | No |
ClinGen gnomAD |
|
|
CA957125 rs780346932 |
1916 | D>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001091510 rs1659470705 |
1918 | D>V | No |
ClinVar dbSNP |
|
| TCGA novel | 1918 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001339012 CA957124 rs756324586 |
1919 | D>Y | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs750720276 CA957123 |
1920 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA26837305 rs985680910 |
1920 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA341280376 rs1178700065 |
1922 | A>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA341280381 rs1436257994 |
1922 | A>S | No |
ClinGen gnomAD |
|
|
CA341280364 rs1483230252 |
1923 | E>G | No |
ClinGen gnomAD |
|
|
CA341280310 rs1305924893 |
1927 | R>K | No |
ClinGen TOPMed |
|
|
rs1239043938 CA341280284 |
1929 | I>L | No |
ClinGen gnomAD |
|
|
rs1315622875 CA341280266 |
1930 | T>I | No |
ClinGen gnomAD |
|
|
CA26837293 rs954069176 |
1931 | G>A | No |
ClinGen TOPMed |
|
|
rs1030110768 CA26837289 |
1936 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs752617721 CA957120 |
1937 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs765282381 CA957119 |
1937 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA26837279 rs112853114 |
1938 | L>S | No |
ClinGen Ensembl |
|
|
rs1659465707 RCV001220524 |
1941 | H>missing | No |
ClinVar dbSNP |
|
|
CA957116 rs772881159 |
1942 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs771504096 CA957115 |
1945 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA957099 rs767141052 |
1946 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263157981 CA341280034 |
1946 | I>V | No |
ClinGen TOPMed gnomAD |
|
| VAR_085027 | 1948 | P>S | No | UniProt | |
|
rs1174706469 CA341279994 |
1949 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA341279982 rs1215922056 |
1950 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA341279967 rs1440451733 |
1951 | S>F | No |
ClinGen TOPMed |
|
|
CA957098 rs768097538 |
1951 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs763465478 CA957097 |
1952 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1300315152 CA341279919 |
1955 | V>A | No |
ClinGen TOPMed |
|
| TCGA novel | 1955 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1553187228 RCV000498153 |
1956 | D>missing | No |
ClinVar dbSNP |
|
|
CA341279887 rs916003424 |
1958 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1379929424 CA341279858 |
1960 | V>I | No |
ClinGen gnomAD |
|
|
CA957093 rs747276412 |
1962 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs62642059 RCV000085771 |
1963 | R>missing | No |
ClinVar dbSNP |
|
|
COSM1688050 rs777887467 CA957092 |
1963 | R>C | Variant assessed as Somatic; 0.0 impact. skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA957091 rs758431657 COSM1638007 |
1963 | R>H | bone [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs753741017 CA341279834 |
1964 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs753741017 CA957090 |
1964 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA341279835 rs1460131190 |
1964 | P>S | No |
ClinGen gnomAD |
|
|
CA341279740 rs1220912878 |
1968 | F>L | No |
ClinGen gnomAD |
|
|
rs745851261 CA957066 |
1969 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs886044756 CA26836823 |
1970 | L>R | No |
ClinGen TOPMed |
|
|
RCV000085775 rs61753035 CA227353 |
1972 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV001240501 rs1659429852 |
1974 | N>S | No |
ClinVar dbSNP |
|
|
CA26836791 rs867079318 |
1977 | G>D | No |
ClinGen gnomAD |
|
|
CA957061 rs752147871 |
1981 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA26836782 rs142123094 |
1981 | T>P | No |
ClinGen ESP |
|
|
rs1413097229 CA341279585 |
1982 | F>S | No |
ClinGen gnomAD |
|
|
rs1187562067 CA341279575 |
1983 | K>E | No |
ClinGen gnomAD |
|
|
rs61748516 CA227360 |
1984 | M>T | No |
ClinGen Ensembl |
|
|
rs760098992 CA957059 |
1986 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61750640 RCV000085781 |
1988 | D>missing | No |
ClinVar dbSNP |
|
|
CA957057 rs766811018 |
1989 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1989 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341279471 rs1331016486 |
1991 | V>A | No |
ClinGen gnomAD |
|
|
rs1571247241 CA341279466 |
1992 | T>P | No |
ClinGen Ensembl |
|
|
rs1659426203 RCV001066937 |
1992 | T>missing | No |
ClinVar dbSNP |
|
|
CA341279450 rs1167285635 |
1993 | S>A | No |
ClinGen TOPMed |
|
|
CA341279455 rs1167285635 |
1993 | S>T | No |
ClinGen TOPMed |
|
|
CA26836741 rs267598772 |
1994 | G>R | No |
ClinGen Ensembl |
|
|
CA957056 rs141489669 |
1995 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1999 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1005610645 CA26836730 |
2000 | G>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 2002 | S>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341279346 rs1305769551 |
2002 | S>C | No |
ClinGen TOPMed |
|
|
rs1450102205 CA341279226 |
2005 | T>A | No |
ClinGen gnomAD |
|
|
rs1192886414 CA341279212 |
2007 | I>V | No |
ClinGen gnomAD |
|
|
rs761889058 CA957037 |
2008 | S>C | No |
ClinGen ExAC gnomAD |
|
|
RCV000430956 CA16603795 rs1057523778 |
2011 | H>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA341279173 rs1248217831 |
2012 | Q>E | No |
ClinGen gnomAD |
|
|
rs1571245857 CA341279170 |
2012 | Q>P | No |
ClinGen Ensembl |
|
|
rs774582273 CA957036 |
2013 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1436856077 CA341279132 |
2015 | G>C | No |
ClinGen gnomAD |
|
|
CA26835481 rs1012284944 |
2015 | G>D | No |
ClinGen TOPMed |
|
| TCGA novel | 2019 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763030891 CA957034 |
2021 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1762114 CA341279057 |
2023 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA957032 rs747011478 |
2024 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA957031 rs777410156 |
2025 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA957030 rs183398940 |
2032 | H>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs779751119 CA957028 |
2036 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs756555985 CA957027 |
2037 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA341278937 rs1469384146 |
2039 | L>I | No |
ClinGen gnomAD |
|
|
rs148460146 CA341278921 RCV000994032 |
2040 | R>P | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001057253 rs138384263 CA957025 |
2042 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA26835369 rs866555749 |
2043 | P>L | No |
ClinGen gnomAD |
|
|
rs763230559 RCV001065980 CA957024 |
2043 | P>T | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 2046 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA957022 rs755513058 |
2048 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
RCV001340590 CA957021 rs760481450 |
2049 | K>T | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1336879013 CA341278397 |
2051 | A>V | No |
ClinGen Ensembl |
|
|
rs1256218315 CA341278392 |
2052 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA956999 rs761879757 |
2052 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA956998 rs774264864 |
2053 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA956997 rs768592753 |
2056 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| VAR_012606 | 2059 | G>A | No | UniProt | |
|
rs748905369 CA956996 |
2059 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769125527 CA956994 |
2061 | T>S | No |
ClinGen ExAC gnomAD |
|
|
RCV000280872 rs886042319 |
2062 | V>missing | No |
ClinVar dbSNP |
|
|
rs769706474 CA26832677 |
2062 | V>A | No |
ClinGen Ensembl |
|
|
rs1322454000 CA341278323 |
2062 | V>L | No |
ClinGen gnomAD |
|
|
CA26832669 rs959036320 |
2063 | Y>C | No |
ClinGen TOPMed |
|
|
CA227375 rs61753040 RCV000085794 |
2064 | A>P | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA956991 rs757733177 |
2065 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA10605692 rs886043588 RCV000361224 |
2065 | D>H | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
TCGA novel rs886043588 RCV001319810 |
2065 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinVar NCI-TCGA dbSNP |
|
rs146991223 CA956990 |
2066 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA341278285 rs1243623408 |
2068 | A>V | No |
ClinGen TOPMed |
|
|
rs151212933 CA26832622 |
2070 | T>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA956989 rs778066205 |
2070 | T>M | No |
ClinGen ExAC gnomAD |
|
|
RCV001340926 rs1659197227 |
2071 | Y>N | No |
ClinVar dbSNP |
|
|
RCV000596944 CA341278263 rs1553186514 |
2072 | S>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs752850266 RCV000494048 CA956987 |
2073 | G>A | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA956986 rs367839100 |
2074 | G>D | Cone-rod dystrophy 3 (cord3) [Ensembl] | No |
ClinGen ESP ExAC gnomAD |
|
rs1165659113 CA341278238 |
2076 | K>T | No |
ClinGen TOPMed |
|
|
rs1659195585 RCV001053427 |
2078 | K>N | No |
ClinVar dbSNP |
|
|
CA956984 rs753921905 |
2079 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA341278217 rs1346127078 |
2080 | S>A | No |
ClinGen TOPMed |
|
|
CA341278214 rs1470665745 |
2080 | S>F | No |
ClinGen Ensembl |
|
|
CA341278208 rs1447707905 |
2081 | T>I | No |
ClinGen TOPMed |
|
|
RCV001232207 rs1659195030 |
2082 | A>V | No |
ClinVar dbSNP |
|
|
CA956983 rs1801359 |
2083 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA956982 rs774460912 |
2084 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA956981 rs763910995 |
2085 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA956980 rs775204417 |
2086 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA341278176 rs1286313373 |
2086 | I>V | No |
ClinGen TOPMed |
|
|
rs769480667 CA956979 |
2087 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA956978 rs745550950 |
2088 | C>W | No |
ClinGen ExAC gnomAD |
|
|
CA956977 rs533271864 |
2090 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs533271864 CA341278118 |
2090 | P>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341278095 rs1427296561 |
2092 | V>A | No |
ClinGen gnomAD |
|
|
rs1064793015 CA341277634 |
2095 | D>G | No |
ClinGen gnomAD |
|
|
CA16617199 rs1064793015 RCV000483911 |
2095 | D>V | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA956911 rs747046963 |
2097 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61750647 RCV000085805 |
2101 | M>missing | No |
ClinVar dbSNP |
|
|
rs1291006472 CA341277599 |
2101 | M>L | No |
ClinGen TOPMed |
|
|
RCV001052521 rs1659161479 |
2101 | M>R | No |
ClinVar dbSNP |
|
|
RCV001240517 rs568627877 CA956910 |
2102 | D>E | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
CA341277588 rs1409314346 |
2102 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 2104 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001321174 rs1659161167 |
2104 | Q>R | No |
ClinVar dbSNP |
|
|
CA956908 rs749244504 |
2105 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1659160781 RCV001212625 |
2106 | R>missing | No |
ClinVar dbSNP |
|
|
rs62642564 CA227390 RCV000085808 |
2107 | R>P | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs2297669 CA26831758 RCV000596790 |
2107 | R>S | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1239999508 CA341277538 |
2111 | N>D | No |
ClinGen gnomAD |
|
|
CA341277533 rs371572812 |
2111 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 2111 | N>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001241899 rs571031879 CA956903 |
2112 | V>L | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs763507963 CA956901 |
2113 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA227394 RCV000085810 rs61750649 |
2113 | I>M | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs759996549 CA956898 |
2114 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA341277509 rs771055152 |
2116 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA956896 rs760999534 |
2116 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA956897 rs771055152 |
2116 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61750650 RCV000085813 |
2118 | R>missing | No |
ClinVar dbSNP |
|
|
rs1367443683 CA341277490 |
2119 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 2121 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs532732547 CA956894 |
2123 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs749156523 CA956893 |
2124 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 2124 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA956892 rs779979701 |
2126 | T>S | No |
ClinGen ExAC |
|
|
rs1448197591 CA341277372 |
2135 | A>T | No |
ClinGen gnomAD |
|
|
rs761867791 CA956878 |
2139 | R>Q | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA341277342 rs774475956 RCV000994031 |
2140 | L>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1193084148 CA341277340 |
2141 | A>T | No |
ClinGen gnomAD |
|
|
rs1184801813 RCV000756941 CA341277330 |
2142 | I>M | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs769683820 CA956876 RCV001324176 |
2142 | I>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
COSM426857 rs1286076948 CA341277327 |
2143 | M>L | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
COSM1684841 rs866475838 CA26831556 |
2144 | V>I | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA341277309 rs898249950 CA26831555 |
2145 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA956874 rs780798765 |
2148 | F>L | No |
ClinGen ExAC gnomAD |
|
|
RCV001209848 CA956873 rs61750655 |
2149 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs61750656 CA341277288 |
2150 | C>G | No |
ClinGen TOPMed |
|
|
rs758183365 CA956872 |
2151 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA341277282 rs1345664981 |
2151 | M>V | No |
ClinGen gnomAD |
|
|
CA341277269 rs1432914742 |
2153 | T>A | No |
ClinGen TOPMed |
|
| TCGA novel | 2155 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 2156 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1168957685 CA341277222 |
2159 | S>F | No |
ClinGen gnomAD |
|
|
CA956857 rs545397722 |
2162 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1035347620 CA26829098 |
2163 | D>N | No |
ClinGen Ensembl |
|
|
CA341276737 rs1395925042 |
2164 | G>S | No |
ClinGen gnomAD |
|
|
RCV000085825 rs61751379 CA227410 |
2166 | I>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs200658526 CA956854 |
2166 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs761087853 CA956852 |
2167 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 2169 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA956851 rs780593170 |
2169 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA341276690 rs1182518547 |
2171 | I>F | No |
ClinGen gnomAD |
|
|
rs756641536 RCV001235126 CA956850 |
2174 | P>L | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs63749079 RCV000085826 |
2175 | K>missing | No |
ClinVar dbSNP |
|
|
rs1267125220 CA341276624 |
2181 | D>A | No |
ClinGen gnomAD |
|
|
rs63749058 RCV000085828 |
2182 | L>missing | No |
ClinVar dbSNP |
|
|
rs751809329 CA956847 |
2183 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1279621803 CA341276602 |
2184 | P>L | No |
ClinGen gnomAD |
|
|
rs1243362165 CA341276600 |
2185 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 2186 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341276583 rs1339233014 |
2187 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
RCV000085830 rs61751381 |
2190 | Q>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 2191 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA341276547 rs186908930 |
2192 | N>S | No |
ClinGen 1000Genomes gnomAD |
|
|
CA26828980 rs186908930 |
2192 | N>T | No |
ClinGen 1000Genomes gnomAD |
|
|
CA341276534 rs1175215643 |
2194 | P>A | No |
ClinGen TOPMed |
|
|
rs775491217 CA956845 |
2196 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA341276521 rs1402664483 |
2196 | S>N | No |
ClinGen gnomAD |
|
|
CA341276520 rs1402664483 |
2196 | S>T | No |
ClinGen gnomAD |
|
|
CA341276502 rs1357360122 |
2199 | R>G | No |
ClinGen TOPMed |
|
|
rs766336439 CA956844 |
2199 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1020796297 CA26828902 |
2200 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs760573590 CA956843 |
2200 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61751409 RCV000085833 |
2201 | R>missing | No |
ClinVar dbSNP |
|
|
CA956842 rs773123480 |
2201 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA26828896 rs773123480 |
2201 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1366674524 CA341276473 |
2203 | Y>C | No |
ClinGen gnomAD |
|
|
CA341276468 rs1571240056 |
2204 | N>D | No |
ClinGen Ensembl |
|
|
rs772018688 CA956841 |
2205 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs747764466 CA956840 |
2206 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA956839 rs565752959 |
2207 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA341276441 rs1374099516 |
2208 | F>L | No |
ClinGen TOPMed |
|
|
rs768248480 CA956838 |
2208 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM109797 rs145067079 CA26828845 |
2209 | Q>* | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1448385291 CA341276432 |
2209 | Q>R | No |
ClinGen gnomAD |
|
|
CA341276420 rs1224505996 |
2211 | S>A | No |
ClinGen TOPMed |
|
|
rs748822256 CA956837 |
2211 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA341276396 rs1488783322 |
2215 | L>P | No |
ClinGen gnomAD |
|
|
rs886044763 CA341276391 |
2216 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs377678684 CA956834 |
2217 | R>W | No |
ClinGen ESP ExAC gnomAD |
|
|
CA956833 rs746382656 |
2218 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA956832 rs781494461 |
2219 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs61753046 CA956831 |
2220 | Q>K | Retinitis pigmentosa 19 (rp19) [Ensembl] | No |
ClinGen 1000Genomes ExAC gnomAD |
|
rs1403697239 CA341276367 |
2220 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA341276361 rs1367504380 |
2221 | L>H | No |
ClinGen gnomAD |
|
|
rs1571239957 RCV001009081 |
2224 | S>missing | No |
ClinVar dbSNP |
|
|
rs752790640 CA956828 |
2225 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs765287252 CA956827 |
2226 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA956826 rs200821403 |
2228 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA956825 rs1801626 |
2231 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1449421449 CA341276298 |
2231 | I>T | No |
ClinGen gnomAD |
|
|
RCV001219955 rs774350716 CA956824 |
2232 | E>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA26828714 rs1000816748 |
2235 | S>A | No |
ClinGen TOPMed |
|
|
RCV000085844 rs62646877 |
2236 | V>missing | No |
ClinVar dbSNP |
|
|
rs111698688 CA26828684 |
2236 | V>A | No |
ClinGen Ensembl |
|
|
rs281865383 RCV000085846 |
2237 | T>missing | No |
ClinVar dbSNP |
|
|
rs61751260 RCV000085845 |
2237 | T>missing | No |
ClinVar dbSNP |
|
|
rs1216715608 CA341276255 |
2238 | Q>E | No |
ClinGen gnomAD |
|
| TCGA novel | 2239 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001038128 rs1659051255 |
2241 | L>P | No |
ClinVar dbSNP |
|
|
rs1316009444 CA341276231 |
2242 | D>A | No |
ClinGen gnomAD |
|
| TCGA novel | 2243 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000085854 rs281865406 |
2250 | K>missing | No |
ClinVar dbSNP |
|
|
CA26827387 rs777132940 |
2250 | K>E | No |
ClinGen gnomAD |
|
|
CA956794 rs753934929 |
2251 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA26827362 rs887287405 |
2253 | T>A | No |
ClinGen Ensembl |
|
|
rs201483150 CA26827356 |
2253 | T>S | No |
ClinGen Ensembl |
|
|
CA26827355 rs201392741 |
2256 | H>R | No |
ClinGen 1000Genomes gnomAD |
|
|
CA341275752 rs1571238939 |
2257 | D>A | No |
ClinGen Ensembl |
|
|
CA341275756 rs1327249006 |
2257 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA956793 rs757212387 |
2258 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA341275741 rs1224355849 |
2259 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA341275729 rs1571238931 |
2261 | H>P | No |
ClinGen Ensembl |
|
|
rs1571238924 CA341275726 |
2261 | H>Q | No |
ClinGen Ensembl |
|
|
CA341275720 rs1283482726 |
2262 | P>R | No |
ClinGen gnomAD |
|
|
RCV001205545 rs998363634 CA26827332 |
2263 | R>* | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
COSM682664 CA956789 rs281865407 |
2263 | R>P | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA956790 rs281865407 RCV001314793 |
2263 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA956788 rs764794519 |
2266 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA956785 rs765900918 |
2272 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
RCV001348092 CA956784 rs761134287 |
2272 | Q>R | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1305529425 CA341275654 |
2273 | D>Y | No |
ClinGen gnomAD |
|
|
rs1571237505 CA341275643 |
2274 | D>C | No |
ClinGen Ensembl |
5 associated diseases with P78363
[MIM: 248200]: Stargardt disease 1 (STGD1)
A common hereditary macular degeneration. It is characterized by decreased central vision, atrophy of the macula and underlying retinal pigment epithelium, and frequent presence of prominent flecks in the posterior pole of the retina. {ECO:0000269|PubMed:10090887, ECO:0000269|PubMed:10206579, ECO:0000269|PubMed:10612508, ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:10711710, ECO:0000269|PubMed:10746567, ECO:0000269|PubMed:10958763, ECO:0000269|PubMed:11328725, ECO:0000269|PubMed:11385708, ECO:0000269|PubMed:11527935, ECO:0000269|PubMed:11594993, ECO:0000269|PubMed:15192030, ECO:0000269|PubMed:18977788, ECO:0000269|PubMed:19265867, ECO:0000269|PubMed:20404325, ECO:0000269|PubMed:22735453, ECO:0000269|PubMed:23143460, ECO:0000269|PubMed:23144455, ECO:0000269|PubMed:23419329, ECO:0000269|PubMed:24097981, ECO:0000269|PubMed:24444108, ECO:0000269|PubMed:24457364, ECO:0000269|PubMed:25346251, ECO:0000269|PubMed:26780318, ECO:0000269|PubMed:29847635, ECO:0000269|PubMed:33375396, ECO:0000269|PubMed:9054934, ECO:0000269|PubMed:9490294, ECO:0000269|PubMed:9503029, ECO:0000269|PubMed:9781034, ECO:0000269|PubMed:9973280}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 248200]: Fundus flavimaculatus (FFM)
Autosomal recessive retinal disorder very similar to Stargardt disease. In contrast to Stargardt disease, FFM is characterized by later onset and slowly progressive course. {ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:11379881, ECO:0000269|PubMed:11385708, ECO:0000269|PubMed:9781034}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 153800]: Macular degeneration, age-related, 2 (ARMD2)
A form of age-related macular degeneration, a multifactorial eye disease and the most common cause of irreversible vision loss in the developed world. In most patients, the disease is manifest as ophthalmoscopically visible yellowish accumulations of protein and lipid that lie beneath the retinal pigment epithelium and within an elastin-containing structure known as Bruch membrane. {ECO:0000269|PubMed:19028736, ECO:0000269|PubMed:9295268}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
[MIM: 604116]: Cone-rod dystrophy 3 (CORD3)
An inherited retinal dystrophy characterized by retinal pigment deposits visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa, due to cone photoreceptors degenerating at a higher rate than rod photoreceptors. {ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:10958761, ECO:0000269|PubMed:11385708, ECO:0000269|PubMed:11527935, ECO:0000269|PubMed:25346251, ECO:0000269|PubMed:26780318}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 601718]: Retinitis pigmentosa 19 (RP19)
A retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. RP19 is characterized by choroidal atrophy. {ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:10958763, ECO:0000269|PubMed:25346251}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A common hereditary macular degeneration. It is characterized by decreased central vision, atrophy of the macula and underlying retinal pigment epithelium, and frequent presence of prominent flecks in the posterior pole of the retina. {ECO:0000269|PubMed:10090887, ECO:0000269|PubMed:10206579, ECO:0000269|PubMed:10612508, ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:10711710, ECO:0000269|PubMed:10746567, ECO:0000269|PubMed:10958763, ECO:0000269|PubMed:11328725, ECO:0000269|PubMed:11385708, ECO:0000269|PubMed:11527935, ECO:0000269|PubMed:11594993, ECO:0000269|PubMed:15192030, ECO:0000269|PubMed:18977788, ECO:0000269|PubMed:19265867, ECO:0000269|PubMed:20404325, ECO:0000269|PubMed:22735453, ECO:0000269|PubMed:23143460, ECO:0000269|PubMed:23144455, ECO:0000269|PubMed:23419329, ECO:0000269|PubMed:24097981, ECO:0000269|PubMed:24444108, ECO:0000269|PubMed:24457364, ECO:0000269|PubMed:25346251, ECO:0000269|PubMed:26780318, ECO:0000269|PubMed:29847635, ECO:0000269|PubMed:33375396, ECO:0000269|PubMed:9054934, ECO:0000269|PubMed:9490294, ECO:0000269|PubMed:9503029, ECO:0000269|PubMed:9781034, ECO:0000269|PubMed:9973280}. Note=The disease is caused by variants affecting the gene represented in this entry.
- Autosomal recessive retinal disorder very similar to Stargardt disease. In contrast to Stargardt disease, FFM is characterized by later onset and slowly progressive course. {ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:11379881, ECO:0000269|PubMed:11385708, ECO:0000269|PubMed:9781034}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A form of age-related macular degeneration, a multifactorial eye disease and the most common cause of irreversible vision loss in the developed world. In most patients, the disease is manifest as ophthalmoscopically visible yellowish accumulations of protein and lipid that lie beneath the retinal pigment epithelium and within an elastin-containing structure known as Bruch membrane. {ECO:0000269|PubMed:19028736, ECO:0000269|PubMed:9295268}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
- An inherited retinal dystrophy characterized by retinal pigment deposits visible on fundus examination, predominantly in the macular region, and initial loss of cone photoreceptors followed by rod degeneration. This leads to decreased visual acuity and sensitivity in the central visual field, followed by loss of peripheral vision. Severe loss of vision occurs earlier than in retinitis pigmentosa, due to cone photoreceptors degenerating at a higher rate than rod photoreceptors. {ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:10958761, ECO:0000269|PubMed:11385708, ECO:0000269|PubMed:11527935, ECO:0000269|PubMed:25346251, ECO:0000269|PubMed:26780318}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well. RP19 is characterized by choroidal atrophy. {ECO:0000269|PubMed:10634594, ECO:0000269|PubMed:10958763, ECO:0000269|PubMed:25346251}. Note=The disease is caused by variants affecting the gene represented in this entry.
7 regional properties for P78363
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ABC transporter-like, ATP-binding domain | 929 - 1160 | IPR003439-1 |
| domain | ABC transporter-like, ATP-binding domain | 1938 - 2170 | IPR003439-2 |
| domain | AAA+ ATPase domain | 955 - 1145 | IPR003593-1 |
| domain | AAA+ ATPase domain | 1964 - 2148 | IPR003593-2 |
| domain | ABC-2 type transporter, transmembrane domain | 611 - 856 | IPR013525-1 |
| domain | ABC-2 type transporter, transmembrane domain | 1604 - 1895 | IPR013525-2 |
| conserved_site | ABC transporter-like, conserved site | 1062 - 1076 | IPR017871 |
Functions
| Description | ||
|---|---|---|
| EC Number | 7.6.2.1 | Linked to the hydrolysis of a nucleoside triphosphate |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| photoreceptor disc membrane | Stack of disc membranes located inside a photoreceptor outer segment, and containing densely packed molecules of photoreceptor proteins that traverse the lipid bilayer. Disc membranes arise as evaginations of the ciliary membrane during the development of the outer segment and may or may not remain contiguous with the ciliary membrane. |
| photoreceptor outer segment | The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins. |
| rod photoreceptor disc membrane | Stack of disc membranes located inside a rod photoreceptor outer segment, and containing densely packed molecules of rhodopsin photoreceptor proteins that traverse the lipid bilayer. It is thought that rod disc membranes arise as evaginations of the ciliary membrane near the base of the outer segment, which then become completely separated from the ciliary membrane, during the development of the rod outer segment. |
15 GO annotations of molecular function
| Name | Definition |
|---|---|
| 11-cis retinal binding | Binding to 11-cis retinal, an isomer of retinal that plays an important role in the visual process in most vertebrates. 11-cis retinal combines with opsin in the rods (scotopsin) to form rhodopsin or visual purple. Retinal is one of the three compounds that makes up vitamin A. |
| ABC-type transporter activity | Primary active transporter characterized by two nucleotide-binding domains and two transmembrane domains. Uses the energy generated from ATP hydrolysis to drive the transport of a substance across a membrane. |
| all-trans retinal binding | Binding to all-trans retinal, a compound that plays an important role in the visual process in most vertebrates. All-trans retinal (trans r., visual yellow) results from the bleaching of rhodopsin by light, in which the 11-cis form is converted to the all-trans form. Retinal is one of the forms of vitamin A. |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| ATPase-coupled intramembrane lipid transporter activity | Catalysis of the movement of lipids from one membrane leaflet to the other, driven by ATP hydrolysis. This includes flippases and floppases. |
| ATPase-coupled transmembrane transporter activity | Primary active transporter of a solute across a membrane, via the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of a substance across a membrane. The transport protein may be transiently phosphorylated (P-type transporters), or not (ABC-type transporters and other families of transporters). Primary active transport occurs up the solute's concentration gradient and is driven by a primary energy source. |
| flippase activity | Catalysis of the movement of lipids from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate. |
| lipid transporter activity | Enables the directed movement of lipids into, out of or within a cell, or between cells. |
| N-retinylidene-phosphatidylethanolamine flippase activity | Catalysis of the movement of N-retinylidene-N-retinylphosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| phosphatidylethanolamine flippase activity | Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| phospholipid transporter activity | Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester. |
| retinoid binding | Binding to a retinoid, a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity. |
| retinol transmembrane transporter activity | Enables the transfer of retinol from one side of a membrane to the other. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| lipid transport | The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. |
| phospholipid transfer to membrane | The transfer of a phospholipid from its site of synthesis to the plasma membrane. |
| phospholipid translocation | The movement of a phospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet. |
| photoreceptor cell maintenance | Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light. |
| phototransduction, visible light | The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm. |
| retinal metabolic process | The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A. |
| retinoid metabolic process | The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity. |
| transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
| visual perception | The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. |
12 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8IUA7 | ABCA9 | ATP-binding cassette sub-family A member 9 | Homo sapiens (Human) | PR |
| Q8N139 | ABCA6 | ATP-binding cassette sub-family A member 6 | Homo sapiens (Human) | PR |
| Q8WWZ4 | ABCA10 | ATP-binding cassette sub-family A member 10 | Homo sapiens (Human) | PR |
| Q8WWZ7 | ABCA5 | Cholesterol transporter ABCA5 | Homo sapiens (Human) | PR |
| Q86UK0 | ABCA12 | Glucosylceramide transporter ABCA12 | Homo sapiens (Human) | PR |
| Q8K449 | Abca9 | ATP-binding cassette sub-family A member 9 | Mus musculus (Mouse) | PR |
| Q8K448 | Abca5 | Cholesterol transporter ABCA5 | Mus musculus (Mouse) | PR |
| Q8K442 | Abca8a | ABC-type organic anion transporter ABCA8A | Mus musculus (Mouse) | PR |
| P34358 | ced-7 | ABC transporter ced-7 | Caenorhabditis elegans | PR |
| Q84K47 | ABCA2 | ABC transporter A family member 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FKF2 | ABCA11 | ABC transporter A family member 11 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FLT5 | ABCA9 | ABC transporter A family member 9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGFVRQIQLL | LWKNWTLRKR | QKIRFVVELV | WPLSLFLVLI | WLRNANPLYS | HHECHFPNKA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MPSAGMLPWL | QGIFCNVNNP | CFQSPTPGES | PGIVSNYNNS | ILARVYRDFQ | ELLMNAPESQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| HLGRIWTELH | ILSQFMDTLR | THPERIAGRG | IRIRDILKDE | ETLTLFLIKN | IGLSDSVVYL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LINSQVRPEQ | FAHGVPDLAL | KDIACSEALL | ERFIIFSQRR | GAKTVRYALC | SLSQGTLQWI |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EDTLYANVDF | FKLFRVLPTL | LDSRSQGINL | RSWGGILSDM | SPRIQEFIHR | PSMQDLLWVT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RPLMQNGGPE | TFTKLMGILS | DLLCGYPEGG | GSRVLSFNWY | EDNNYKAFLG | IDSTRKDPIY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SYDRRTTSFC | NALIQSLESN | PLTKIAWRAA | KPLLMGKILY | TPDSPAARRI | LKNANSTFEE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LEHVRKLVKA | WEEVGPQIWY | FFDNSTQMNM | IRDTLGNPTV | KDFLNRQLGE | EGITAEAILN |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FLYKGPRESQ | ADDMANFDWR | DIFNITDRTL | RLVNQYLECL | VLDKFESYND | ETQLTQRALS |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LLEENMFWAG | VVFPDMYPWT | SSLPPHVKYK | IRMDIDVVEK | TNKIKDRYWD | SGPRADPVED |
| 610 | 620 | 630 | 640 | 650 | 660 |
| FRYIWGGFAY | LQDMVEQGIT | RSQVQAEAPV | GIYLQQMPYP | CFVDDSFMII | LNRCFPIFMV |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LAWIYSVSMT | VKSIVLEKEL | RLKETLKNQG | VSNAVIWCTW | FLDSFSIMSM | SIFLLTIFIM |
| 730 | 740 | 750 | 760 | 770 | 780 |
| HGRILHYSDP | FILFLFLLAF | STATIMLCFL | LSTFFSKASL | AAACSGVIYF | TLYLPHILCF |
| 790 | 800 | 810 | 820 | 830 | 840 |
| AWQDRMTAEL | KKAVSLLSPV | AFGFGTEYLV | RFEEQGLGLQ | WSNIGNSPTE | GDEFSFLLSM |
| 850 | 860 | 870 | 880 | 890 | 900 |
| QMMLLDAAVY | GLLAWYLDQV | FPGDYGTPLP | WYFLLQESYW | LGGEGCSTRE | ERALEKTEPL |
| 910 | 920 | 930 | 940 | 950 | 960 |
| TEETEDPEHP | EGIHDSFFER | EHPGWVPGVC | VKNLVKIFEP | CGRPAVDRLN | ITFYENQITA |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| FLGHNGAGKT | TTLSILTGLL | PPTSGTVLVG | GRDIETSLDA | VRQSLGMCPQ | HNILFHHLTV |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| AEHMLFYAQL | KGKSQEEAQL | EMEAMLEDTG | LHHKRNEEAQ | DLSGGMQRKL | SVAIAFVGDA |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| KVVILDEPTS | GVDPYSRRSI | WDLLLKYRSG | RTIIMSTHHM | DEADLLGDRI | AIIAQGRLYC |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| SGTPLFLKNC | FGTGLYLTLV | RKMKNIQSQR | KGSEGTCSCS | SKGFSTTCPA | HVDDLTPEQV |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| LDGDVNELMD | VVLHHVPEAK | LVECIGQELI | FLLPNKNFKH | RAYASLFREL | EETLADLGLS |
| 1270 | 1280 | 1290 | 1300 | 1310 | 1320 |
| SFGISDTPLE | EIFLKVTEDS | DSGPLFAGGA | QQKRENVNPR | HPCLGPREKA | GQTPQDSNVC |
| 1330 | 1340 | 1350 | 1360 | 1370 | 1380 |
| SPGAPAAHPE | GQPPPEPECP | GPQLNTGTQL | VLQHVQALLV | KRFQHTIRSH | KDFLAQIVLP |
| 1390 | 1400 | 1410 | 1420 | 1430 | 1440 |
| ATFVFLALML | SIVIPPFGEY | PALTLHPWIY | GQQYTFFSMD | EPGSEQFTVL | ADVLLNKPGF |
| 1450 | 1460 | 1470 | 1480 | 1490 | 1500 |
| GNRCLKEGWL | PEYPCGNSTP | WKTPSVSPNI | TQLFQKQKWT | QVNPSPSCRC | STREKLTMLP |
| 1510 | 1520 | 1530 | 1540 | 1550 | 1560 |
| ECPEGAGGLP | PPQRTQRSTE | ILQDLTDRNI | SDFLVKTYPA | LIRSSLKSKF | WVNEQRYGGI |
| 1570 | 1580 | 1590 | 1600 | 1610 | 1620 |
| SIGGKLPVVP | ITGEALVGFL | SDLGRIMNVS | GGPITREASK | EIPDFLKHLE | TEDNIKVWFN |
| 1630 | 1640 | 1650 | 1660 | 1670 | 1680 |
| NKGWHALVSF | LNVAHNAILR | ASLPKDRSPE | EYGITVISQP | LNLTKEQLSE | ITVLTTSVDA |
| 1690 | 1700 | 1710 | 1720 | 1730 | 1740 |
| VVAICVIFSM | SFVPASFVLY | LIQERVNKSK | HLQFISGVSP | TTYWVTNFLW | DIMNYSVSAG |
| 1750 | 1760 | 1770 | 1780 | 1790 | 1800 |
| LVVGIFIGFQ | KKAYTSPENL | PALVALLLLY | GWAVIPMMYP | ASFLFDVPST | AYVALSCANL |
| 1810 | 1820 | 1830 | 1840 | 1850 | 1860 |
| FIGINSSAIT | FILELFENNR | TLLRFNAVLR | KLLIVFPHFC | LGRGLIDLAL | SQAVTDVYAR |
| 1870 | 1880 | 1890 | 1900 | 1910 | 1920 |
| FGEEHSANPF | HWDLIGKNLF | AMVVEGVVYF | LLTLLVQRHF | FLSQWIAEPT | KEPIVDEDDD |
| 1930 | 1940 | 1950 | 1960 | 1970 | 1980 |
| VAEERQRIIT | GGNKTDILRL | HELTKIYPGT | SSPAVDRLCV | GVRPGECFGL | LGVNGAGKTT |
| 1990 | 2000 | 2010 | 2020 | 2030 | 2040 |
| TFKMLTGDTT | VTSGDATVAG | KSILTNISEV | HQNMGYCPQF | DAIDELLTGR | EHLYLYARLR |
| 2050 | 2060 | 2070 | 2080 | 2090 | 2100 |
| GVPAEEIEKV | ANWSIKSLGL | TVYADCLAGT | YSGGNKRKLS | TAIALIGCPP | LVLLDEPTTG |
| 2110 | 2120 | 2130 | 2140 | 2150 | 2160 |
| MDPQARRMLW | NVIVSIIREG | RAVVLTSHSM | EECEALCTRL | AIMVKGAFRC | MGTIQHLKSK |
| 2170 | 2180 | 2190 | 2200 | 2210 | 2220 |
| FGDGYIVTMK | IKSPKDDLLP | DLNPVEQFFQ | GNFPGSVQRE | RHYNMLQFQV | SSSSLARIFQ |
| 2230 | 2240 | 2250 | 2260 | 2270 | |
| LLLSHKDSLL | IEEYSVTQTT | LDQVFVNFAK | QQTESHDLPL | HPRAAGASRQ | AQD |