P62136
Gene name |
PPP1CA (PPP1A) |
Protein name |
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit |
Names |
PP-1A |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5499 |
EC number |
3.1.3.16: Phosphoric monoester hydrolases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
43 structures for P62136
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 3E7A | X-ray | 163 A | A/B | 7-300 | PDB |
| 3E7B | X-ray | 170 A | A/B | 7-300 | PDB |
| 3EGG | X-ray | 185 A | A/B | 7-330 | PDB |
| 3EGH | X-ray | 200 A | A/B | 7-330 | PDB |
| 3HVQ | X-ray | 220 A | A/B | 7-330 | PDB |
| 3N5U | X-ray | 320 A | A/B | 1-300 | PDB |
| 3V4Y | X-ray | 210 A | A/C/E/G | 7-307 | PDB |
| 4G9J | X-ray | 310 A | A/B | 1-330 | PDB |
| 4MOV | X-ray | 145 A | A/B | 7-300 | PDB |
| 4MOY | X-ray | 220 A | A | 7-300 | PDB |
| 4MP0 | X-ray | 210 A | A/C | 7-300 | PDB |
| 4XPN | X-ray | 229 A | A/C | 7-300 | PDB |
| 5IOH | X-ray | 257 A | A/C | 7-300 | PDB |
| 6ALZ | X-ray | 221 A | A/B | 7-300 | PDB |
| 6CZO | X-ray | 295 A | A/C | 7-300 | PDB |
| 6DCX | X-ray | 341 A | A/B | 1-330 | PDB |
| 6DNO | X-ray | 145 A | A | 7-300 | PDB |
| 6G0I | X-ray | 200 A | A | 1-330 | PDB |
| 6G0J | X-ray | 210 A | A | 1-330 | PDB |
| 6GHM | X-ray | 215 A | A/B | 7-330 | PDB |
| 6OBN | X-ray | 270 A | A/B | 1-300 | PDB |
| 6OBP | X-ray | 270 A | A | 1-300 | PDB |
| 6OBQ | X-ray | 184 A | A/B | 7-300 | PDB |
| 6OBR | X-ray | 150 A | A/B | 7-300 | PDB |
| 6OBS | X-ray | 180 A | A/B | 7-300 | PDB |
| 6OBU | X-ray | 195 A | A/B | 7-300 | PDB |
| 6ZEE | X-ray | 190 A | A/B/I/K/P/Q | 7-300 | PDB |
| 6ZEF | X-ray | 194 A | A/B | 7-300 | PDB |
| 6ZEG | X-ray | 109 A | A/B | 7-304 | PDB |
| 6ZEH | X-ray | 130 A | A/B | 7-304 | PDB |
| 6ZEI | X-ray | 139 A | A/B | 7-304 | PDB |
| 6ZEJ | X-ray | 178 A | A/D/F/I/L/O | 7-304 | PDB |
| 6ZK6 | X-ray | 190 A | A | 1-330 | PDB |
| 7QFB | X-ray | 205 A | A | 7-300 | PDB |
| 7QM2 | X-ray | 269 A | A/C | 7-300 | PDB |
| 7T0Y | X-ray | 180 A | A/C | 7-300 | PDB |
| 7TVF | X-ray | 217 A | C/F | 2-330 | PDB |
| 7TXH | X-ray | 195 A | C/F | 7-300 | PDB |
| 7UPI | EM | 289 A | B | 1-330 | PDB |
| 8DWK | X-ray | 250 A | A/B | 7-300 | PDB |
| 8DWL | X-ray | 200 A | A/C | 7-300 | PDB |
| 8U5G | X-ray | 320 A | A | 7-300 | PDB |
| AF-P62136-F1 | Predicted | AlphaFoldDB |
170 variants for P62136
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA381538288 rs1195927448 |
2 | S>F | No |
ClinGen TOPMed |
|
| TCGA novel | 2 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381538219 rs1277027424 |
5 | E>D | No |
ClinGen gnomAD |
|
|
rs1040508170 CA224150621 |
6 | K>N | No |
ClinGen Ensembl |
|
|
rs777809830 CA6137069 |
6 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6137068 rs758536530 |
7 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs943825563 CA224150606 |
9 | L>P | No |
ClinGen gnomAD |
|
|
CA224150600 rs908292931 |
10 | D>E | No |
ClinGen Ensembl |
|
|
rs766387418 CA6137066 |
10 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756043412 CA6137065 |
11 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA224150599 rs982441873 |
11 | S>T | No |
ClinGen Ensembl |
|
|
CA381538124 rs1421197088 |
12 | I>L | No |
ClinGen TOPMed |
|
|
rs767314521 CA6137063 |
13 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs927377317 CA224150591 |
14 | G>E | No |
ClinGen TOPMed |
|
|
CA6137062 rs761547123 |
14 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA6137061 rs774088798 |
15 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381538009 rs1326473191 |
19 | V>M | No |
ClinGen TOPMed |
|
|
rs759063176 CA6137035 |
22 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA6137034 rs777308177 |
23 | R>Q | No |
ClinGen ExAC |
|
|
CA381537427 rs1453818439 |
29 | Q>E | No |
ClinGen gnomAD |
|
| TCGA novel | 32 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1286863709 CA381537271 |
34 | E>K | No |
ClinGen gnomAD |
|
|
CA381537237 rs1198051383 |
36 | R>G | No |
ClinGen gnomAD |
|
|
CA6137029 rs748334344 |
37 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA6137031 rs547598243 |
37 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6137030 rs547598243 |
37 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381537025 rs1232429537 |
45 | I>M | No |
ClinGen TOPMed |
|
|
CA224150156 rs895929309 |
46 | F>I | No |
ClinGen TOPMed |
|
|
CA224150148 rs749938499 |
48 | S>T | No |
ClinGen Ensembl |
|
|
CA6137024 rs781160417 |
52 | L>F | No |
ClinGen ExAC |
|
|
rs868163307 CA224150145 |
56 | E>G | No |
ClinGen TOPMed |
|
|
rs1252820051 CA381536818 |
58 | P>L | No |
ClinGen TOPMed |
|
|
rs777432845 CA381536741 |
61 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1464677331 CA381536722 |
63 | G>S | No |
ClinGen gnomAD |
|
|
CA381536632 rs1438383154 |
65 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381536529 rs1425209726 |
70 | Y>H | No |
ClinGen TOPMed |
|
|
rs1565122218 CA381536486 |
72 | L>F | No |
ClinGen Ensembl |
|
|
CA224150031 rs950965471 |
78 | Y>F | No |
ClinGen Ensembl |
|
|
CA6137001 rs752509154 COSM95044 |
80 | G>S | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6136997 rs368335875 |
82 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6136998 rs753463549 |
82 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs910432711 CA224149996 |
84 | E>D | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 84 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750924472 CA6136995 |
84 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA381536236 rs768037763 |
87 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768037763 CA6136994 |
87 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6136992 rs774688459 |
89 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA381536140 rs1486112747 |
94 | V>M | No |
ClinGen gnomAD |
|
|
rs1167404909 CA381536124 |
95 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1488340584 CA381535948 |
104 | I>T | No |
ClinGen TOPMed |
|
|
CA381535953 rs1320600778 |
104 | I>V | No |
ClinGen gnomAD |
|
|
CA381535861 rs1186521556 |
109 | A>V | No |
ClinGen TOPMed |
|
|
CA381535782 rs1398575142 |
112 | I>M | No |
ClinGen gnomAD |
|
|
CA381535805 rs1298016292 |
112 | I>V | No |
ClinGen gnomAD |
|
|
CA381535779 rs1473710985 |
113 | K>E | No |
ClinGen TOPMed |
|
|
CA224149920 rs368449642 |
113 | K>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381535736 rs1590937260 |
114 | Y>S | No |
ClinGen Ensembl |
|
|
rs971784412 CA381535729 |
115 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA381535726 rs1244315422 |
115 | P>R | No |
ClinGen gnomAD |
|
|
CA224149919 rs971784412 |
115 | P>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 116 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1366852262 CA381535659 |
118 | F>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA224149909 rs866677695 |
123 | G>R | No |
ClinGen Ensembl |
|
|
rs1205717276 CA381535480 |
128 | A>T | No |
ClinGen gnomAD |
|
|
CA381535378 rs1354137773 |
133 | I>M | No |
ClinGen TOPMed |
|
| TCGA novel | 136 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751999455 CA6136975 |
138 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 138 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 139 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1200226054 CA381533972 |
143 | R>C | No |
ClinGen TOPMed |
|
|
COSM1221719 CA381533968 rs1465379397 COSM1221720 |
143 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA381533936 rs1232562330 |
145 | N>D | No |
ClinGen gnomAD |
|
|
CA381533938 rs1232562330 |
145 | N>H | No |
ClinGen gnomAD |
|
|
rs1175444311 CA381533898 |
147 | K>R | No |
ClinGen gnomAD |
|
|
rs1355877895 CA381533863 |
149 | W>* | No |
ClinGen gnomAD |
|
|
rs758799561 CA6136956 |
151 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758799561 CA381533824 |
151 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224149160 rs935023103 |
160 | P>S | No |
ClinGen TOPMed |
|
|
CA6136953 rs759797722 |
162 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA224149147 rs867868948 |
163 | A>T | No |
ClinGen gnomAD |
|
|
rs1307229649 CA381533557 |
164 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA381533566 rs1353594037 |
164 | I>V | No |
ClinGen gnomAD |
|
|
CA381533437 rs1590936228 |
169 | I>M | No |
ClinGen Ensembl |
|
|
CA6136951 rs760799660 |
170 | F>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1016779857 CA224149124 |
170 | F>I | No |
ClinGen Ensembl |
|
| TCGA novel | 179 | D>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1218172889 CA381533031 |
183 | M>I | No |
ClinGen gnomAD |
|
|
CA6136926 rs776300680 |
183 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA6136925 rs559186487 |
184 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1268181440 CA381532945 |
186 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1429835614 CA381532934 |
187 | R>Q | No |
ClinGen TOPMed |
|
|
rs746578350 CA6136923 |
187 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1439073072 CA381532916 |
188 | R>Q | No |
ClinGen gnomAD |
|
|
rs777258366 CA6136921 |
189 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs771504128 CA6136920 |
191 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM1492685 rs1459437708 COSM1492684 CA381532848 |
191 | R>W | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA381532574 rs1444687650 |
203 | D>G | No |
ClinGen TOPMed |
|
| TCGA novel | 210 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1188634488 CA381532394 |
212 | D>G | No |
ClinGen gnomAD |
|
|
CA381532401 rs1367068828 |
212 | D>Y | No |
ClinGen TOPMed |
|
| TCGA novel | 213 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6136917 rs755411315 |
214 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA224148832 rs1020255917 |
215 | G>A | No |
ClinGen Ensembl |
|
|
CA381532266 rs1273880415 |
218 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA381532200 rs1305960330 |
221 | R>C | No |
ClinGen gnomAD |
|
|
CA381532183 rs1216144898 |
223 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 224 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1362342633 CA381532156 |
225 | F>V | No |
ClinGen gnomAD |
|
|
CA6136912 rs767723695 |
226 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA381532143 rs767723695 |
226 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA224148783 rs893381757 |
229 | A>T | No |
ClinGen Ensembl |
|
|
rs1204847934 CA381532039 |
230 | E>K | No |
ClinGen TOPMed |
|
|
rs752708519 CA6136910 |
231 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs772136139 CA224148741 |
234 | K>R | No |
ClinGen Ensembl |
|
|
rs141390658 CA6136906 |
238 | K>R | No |
ClinGen ESP ExAC |
|
|
rs771391700 CA224148733 |
240 | D>N | No |
ClinGen Ensembl |
|
|
CA6136904 rs772793107 |
246 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA381531588 rs1200914410 |
247 | A>V | No |
ClinGen TOPMed |
|
| rs1288805861 | 250 | V>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758412700 CA6136872 |
254 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA381531327 rs1475027542 |
256 | E>K | No |
ClinGen gnomAD |
|
|
CA381531303 rs1284030697 |
257 | F>I | No |
ClinGen TOPMed |
|
|
rs779926444 CA6136870 |
257 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs755953452 CA6136869 |
260 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1257961099 CA381531197 |
261 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381531123 rs1590935343 |
264 | V>G | No |
ClinGen Ensembl |
|
|
rs1213510625 CA381531138 |
264 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs779839364 CA6136866 |
270 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381531051 rs1590935313 |
271 | N>H | No |
ClinGen Ensembl |
|
|
rs1270903141 CA381530962 |
276 | F>Y | No |
ClinGen gnomAD |
|
|
rs1439194638 CA381530929 |
278 | N>D | No |
ClinGen TOPMed |
|
|
CA381530921 rs1156845734 |
278 | N>S | No |
ClinGen TOPMed |
|
|
CA381530860 rs1381071014 |
281 | A>T | No |
ClinGen gnomAD |
|
|
CA224148557 rs866152678 |
281 | A>V | No |
ClinGen Ensembl |
|
|
CA381530834 rs1387207762 |
282 | M>L | No |
ClinGen TOPMed |
|
|
CA381530827 rs1364661974 |
282 | M>T | No |
ClinGen gnomAD |
|
|
CA381530841 rs1387207762 |
282 | M>V | No |
ClinGen TOPMed |
|
|
CA381530638 rs760031545 |
287 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776853710 CA6136859 |
288 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1336990447 CA381530575 |
290 | M>L | No |
ClinGen TOPMed |
|
|
rs758115919 CA6136825 |
295 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6136822 rs754460287 |
297 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs548987693 CA6136821 |
297 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1389382438 CA381530217 |
298 | P>R | No |
ClinGen TOPMed |
|
|
CA6136818 rs773623660 |
299 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6136815 rs774510465 |
300 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 301 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381530120 rs1478078546 CA381530123 |
302 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1420479869 CA381530071 |
305 | K>T | No |
ClinGen gnomAD |
|
|
CA6136812 rs776485148 |
307 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA6136810 rs746842596 |
310 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224148242 rs746842596 |
310 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777712768 CA6136809 |
313 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777712768 CA381529904 |
313 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381529885 rs1289868938 |
314 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381529876 rs1241512739 |
315 | G>R | No |
ClinGen gnomAD |
|
|
rs747823510 CA6136807 |
316 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1565120575 CA381529849 |
317 | R>* | No |
ClinGen Ensembl |
|
|
CA381529843 rs1267409256 |
317 | R>Q | No |
ClinGen TOPMed |
|
|
CA381529805 rs1481728007 |
318 | P>L | No |
ClinGen TOPMed |
|
|
CA6136805 rs754485510 |
320 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA381529760 rs1590934882 |
320 | T>P | No |
ClinGen Ensembl |
|
|
rs1460734162 CA381529715 |
321 | P>S | No |
ClinGen TOPMed |
|
|
rs1414956585 CA381529696 |
322 | P>L | No |
ClinGen gnomAD |
|
|
CA224148176 rs913302876 |
322 | P>S | No |
ClinGen Ensembl |
|
|
rs753366655 CA6136804 |
323 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA6136803 rs766862399 |
323 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381529595 rs140048086 |
326 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6136799 rs140048086 |
326 | A>T | Variant assessed as Somatic; 4.64e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6136798 rs151139917 |
331 | K>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
No associated diseases with P62136
3 regional properties for P62136
Functions
| Description | ||
|---|---|---|
| EC Number | 3.1.3.16 | Phosphoric monoester hydrolases |
| Subcellular Localization |
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| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
15 GO annotations of cellular component
| Name | Definition |
|---|---|
| adherens junction | A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| dendritic spine | A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| glutamatergic synapse | A synapse that uses glutamate as a neurotransmitter. |
| glycogen granule | Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| perikaryon | The portion of the cell soma (neuronal cell body) that excludes the nucleus. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| presynapse | The part of a synapse that is part of the presynaptic cell. |
| protein phosphatase type 1 complex | A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity. |
| PTW/PP1 phosphatase complex | A protein serine/threonine phosphatase complex that contains a catalytic subunit (PPP1CA, PPP1CB or PPP1CC) and the regulatory subunits PPP1R10 (PNUTS), TOX4 and WDR82, and plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. |
8 GO annotations of molecular function
| Name | Definition |
|---|---|
| cadherin binding involved in cell-cell adhesion | Any cadherin binding that occurs as part of the process of cell-cell adhesion. |
| metal ion binding | Binding to a metal ion. |
| myosin phosphatase activity | Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate. |
| phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
| phosphoprotein phosphatase activity | Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cellular proteins and thereby provide an important mechanism for regulating cellular activity. |
| protein phosphatase 1 binding | Binding to a protein phosphatase 1. |
| protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. |
| ribonucleoprotein complex binding | Binding to a complex of RNA and protein. |
20 GO annotations of biological process
| Name | Definition |
|---|---|
| beta-catenin destruction complex disassembly | The disaggregation of a beta-catenin destruction complex into its constituent components. |
| branching morphogenesis of an epithelial tube | The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder. |
| cell cycle | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. |
| cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
| circadian regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours. |
| dephosphorylation | The process of removing one or more phosphoric (ester or anhydride) residues from a molecule. |
| entrainment of circadian clock by photoperiod | The synchronization of a circadian rhythm to photoperiod, the intermittent cycle of light (day) and dark (night). |
| glycogen metabolic process | The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages. |
| lung development | The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. |
| negative regulation of protein binding | Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding. |
| peptidyl-serine dephosphorylation | The removal of phosphoric residues from peptidyl-O-phospho-L-serine to form peptidyl-serine. |
| peptidyl-threonine dephosphorylation | The removal of phosphoric residues from peptidyl-O-phospho-L-threonine to form peptidyl-threonine. |
| positive regulation of extrinsic apoptotic signaling pathway in absence of ligand | Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand. |
| protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
| regulation of canonical Wnt signaling pathway | Any process that modulates the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. |
| regulation of circadian rhythm | Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours. |
| regulation of glycogen biosynthetic process | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen. |
| regulation of glycogen catabolic process | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen. |
| regulation of translational initiation by eIF2 alpha dephosphorylation | Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the dephosphorylation of eIF2 alpha. |
| response to lead ion | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P62140 | PPP1CB | Serine/threonine-protein phosphatase PP1-beta catalytic subunit | Homo sapiens (Human) | PR |
| P62141 | Ppp1cb | Serine/threonine-protein phosphatase PP1-beta catalytic subunit | Mus musculus (Mouse) | PR |
| P62137 | Ppp1ca | Serine/threonine-protein phosphatase PP1-alpha catalytic subunit | Mus musculus (Mouse) | PR |
| P62142 | Ppp1cb | Serine/threonine-protein phosphatase PP1-beta catalytic subunit | Rattus norvegicus (Rat) | PR |
| P34430 | F44B9.9 | Uncharacterized protein F44B9.9 | Caenorhabditis elegans | PR |
| P48459 | C23G10.1 | Serine/threonine-protein phosphatase C23G10.1 | Caenorhabditis elegans | PR |
| O82733 | TOPP7 | Serine/threonine-protein phosphatase PP1 isozyme 7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSDSEKLNLD | SIIGRLLEVQ | GSRPGKNVQL | TENEIRGLCL | KSREIFLSQP | ILLELEAPLK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ICGDIHGQYY | DLLRLFEYGG | FPPESNYLFL | GDYVDRGKQS | LETICLLLAY | KIKYPENFFL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LRGNHECASI | NRIYGFYDEC | KRRYNIKLWK | TFTDCFNCLP | IAAIVDEKIF | CCHGGLSPDL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QSMEQIRRIM | RPTDVPDQGL | LCDLLWSDPD | KDVQGWGEND | RGVSFTFGAE | VVAKFLHKHD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LDLICRAHQV | VEDGYEFFAK | RQLVTLFSAP | NYCGEFDNAG | AMMSVDETLM | CSFQILKPAD |
| 310 | 320 | ||||
| KNKGKYGQFS | GLNPGGRPIT | PPRNSAKAKK |