P60039
Gene name |
RPL7C (At2g44120, F6E13.25) |
Protein name |
60S ribosomal protein L7-3 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G44120 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P60039
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P60039-F1 | Predicted | AlphaFoldDB |
6 variants for P60039
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_18250320_T_C | 28 | D>G | No | 1000Genomes | |
| tmp_2_18250120_G_C | 60 | N>K | No | 1000Genomes | |
| tmp_2_18249668_T_C | 125 | N>S | No | 1000Genomes | |
| tmp_2_18249664_C_T | 126 | M>I | No | 1000Genomes | |
| tmp_2_18249389_C_A | 189 | M>I | No | 1000Genomes | |
| tmp_2_18249270_T_C | 229 | N>S | No | 1000Genomes |
No associated diseases with P60039
4 regional properties for P60039
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ribosomal protein L30, N-terminal | 8 - 79 | IPR012988 |
| domain | Ribosomal protein L30, ferredoxin-like fold domain | 84 - 134 | IPR016082 |
| conserved_site | Ribosomal protein L30, conserved site | 102 - 134 | IPR018038 |
| domain | Ribosomal protein L7, eukaryotic/archaeal | 83 - 242 | IPR035808 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosolic large ribosomal subunit | The large subunit of a ribosome located in the cytosol. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
11 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P05737 | RPL7A | 60S ribosomal protein L7-A | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q58DT1 | RPL7 | 60S ribosomal protein L7 | Bos taurus (Bovine) | PR |
| Q6W5P4 | NPSR1 | Neuropeptide S receptor | Homo sapiens (Human) | PR |
| P18124 | RPL7 | 60S ribosomal protein L7 | Homo sapiens (Human) | PR |
| Q6DKI1 | RPL7L1 | 60S ribosomal protein L7-like 1 | Homo sapiens (Human) | PR |
| Q8BZP8 | Npsr1 | Neuropeptide S receptor | Mus musculus (Mouse) | PR |
| P14148 | Rpl7 | 60S ribosomal protein L7 | Mus musculus (Mouse) | PR |
| Q9D8M4 | Rpl7l1 | 60S ribosomal protein L7-like 1 | Mus musculus (Mouse) | PR |
| A5GFQ0 | RPL7L1 | 60S ribosomal protein L7-like 1 | Sus scrofa (Pig) | PR |
| P05426 | Rpl7 | 60S ribosomal protein L7 | Rattus norvegicus (Rat) | PR |
| Q56H79 | NPSR1 | Neuropeptide S receptor | Macaca mulatta (Rhesus macaque) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAESKVVVPE | SVLKKIKRQE | EWALAKKDEA | VAAKKKSVEA | RKLIFKRAEQ | YAKEYAEKDN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ELIRLKREAK | LKGGFYVDPE | AKLLFIIRIR | GINAIDPKTK | KILQLLRLRQ | IFNGVFLKVN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KATVNMLRRV | EPYVTYGYPN | LKSVKELIYK | RGYGKLNHQR | IALTDNSIVD | QALGKHGIIC |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VEDLIHEIMT | VGPHFKEANN | FLWPFQLKAP | LGGLKKKRNH | YVEGGDAGNR | ENFINELVRR |
| MN |