Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for P21619

Entry ID Method Resolution Chain Position Source
AF-P21619-F1 Predicted AlphaFoldDB

27 variants for P21619

Variant ID(s) Position Change Description Diseaes Association Provenance
rs3389115114 67 V>E No EVA
rs45713754 143 T>A No EVA
rs3389125160 275 D>G No EVA
rs243330100 279 H>R No EVA
rs3389127619 280 A>T No EVA
rs3389104130 291 R>H No EVA
rs3389082739 293 E>* No EVA
rs3389093814 299 L>P No EVA
rs3389114681 318 E>* No EVA
rs3389125177 356 L>M No EVA
rs3389104143 361 A>T No EVA
rs3389114623 369 Y>F No EVA
rs241448295 430 R>S No EVA
rs227358059 444 T>A No EVA
rs3389108160 466 N>Y No EVA
rs3389082815 483 V>D No EVA
rs3389104154 484 L>R No EVA
rs3389093797 492 K>E No EVA
rs225673732 512 A>T No EVA
rs3389108148 514 A>T No EVA
rs3413058741 523 V>M No EVA
rs254713694 528 T>A No EVA
rs244105319 529 N>S No EVA
rs3411747128 544 D>V No EVA
rs238868582 558 V>A No EVA
rs3389125182 559 Q>* No EVA
rs3389058049 587 R>S No EVA

No associated diseases with P21619

3 regional properties for P21619

Type Name Position InterPro Accession
domain Lamin tail domain 428 - 545 IPR001322
conserved_site Intermediate filament protein, conserved site 373 - 381 IPR018039
domain Intermediate filament, rod domain 30 - 387 IPR039008

Functions

Description
EC Number
Subcellular Localization
  • Nucleus lamina
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

5 GO annotations of cellular component

Name Definition
lamin filament Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C.
nuclear envelope The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
nuclear lamina The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane.
nuclear membrane Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

2 GO annotations of molecular function

Name Definition
identical protein binding Binding to an identical protein or proteins.
structural constituent of cytoskeleton The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.

5 GO annotations of biological process

Name Definition
heterochromatin assembly An epigenetic gene silencing mechanism in which chromatin is compacted into heterochromatin, resulting in a chromatin conformation refractory to transcription. This process starts with heterochromatin nucleation, its spreading, and ends with heterochromatin boundary formation.
nuclear envelope organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.
nuclear migration The directed movement of the nucleus to a specific location within a cell.
nuclear pore localization Any process in which nuclear pores are transported to, or maintained in, a specific location.
protein localization to nuclear envelope A process in which a protein is transported to, or maintained at, a location within a nuclear envelope.

10 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
P02545 LMNA Prelamin-A/C Homo sapiens (Human) PR
P17661 DES Desmin Homo sapiens (Human) PR
P08670 VIM Vimentin Homo sapiens (Human) PR
P31001 Des Desmin Mus musculus (Mouse) PR
P20152 Vim Vimentin Mus musculus (Mouse) PR
P48678 Lmna Prelamin-A/C Mus musculus (Mouse) PR
P14733 Lmnb1 Lamin-B1 Mus musculus (Mouse) PR
P70615 Lmnb1 Lamin-B1 Rattus norvegicus (Rat) PR
P48679 Lmna Prelamin-A/C Rattus norvegicus (Rat) PR
Q21065 ifa-3 Intermediate filament protein ifa-3 Caenorhabditis elegans PR
10 20 30 40 50 60
MASLPPHAGP ATPLSPTRLS RLQEKEELRE LNDRLAHYID RVRALELEND RLLLRISEKE
70 80 90 100 110 120
EVTTREVSGI KTLYESELAD ARRVLDETAR ERARLQIEIG KVQAELEEAR KSAKKREGEL
130 140 150 160 170 180
TVAQGRVKDL ESLFHRSEAE LATALSDKQG LETEVAELRA QLAKAEDGHA VAKKQLEKET
190 200 210 220 230 240
LMRVDLENRC QSLQEELAFS KSVFEEEVRE TRRRHERRLV EVDSSRQQEY DFKMAQALED
250 260 270 280 290 300
LRSQHDEQVR LYRVELEQTY QAKLDNAKLL SDQNDKAAHA AREELKEARM RVESLSYQLL
310 320 330 340 350 360
GLQKQASAAE NHIHELEEAL AGERDKFRKM LDAKEQEMTE VRDAMQQQLA EYQELLDIKL
370 380 390 400 410 420
ALDMEISAYR KLLEGEEERL KLSPSPSSRI TISRATSSSS SSSGVGMSVG QGRGKRRRLE
430 440 450 460 470 480
TEDTSGSPSR ASRVSSGSRL AQQTVATGVV NIDEVDPEGR FVRLKNSSDK DQSLGNWRIK
490 500 510 520 530 540
RQVLEGEDIA YKFTPKYVLR AGQTVTVWAA GAGATHSPPS TLVWKSQTNW GPGESFRTAL
550 560 570 580 590
VSADGEEVAV KAAKHSSVQG RENGEEEEEE EAEFGEEDLF HQQGDPRTTS RGCRLM