P08183
Gene name |
ABCB1 |
Protein name |
ATP-dependent translocase ABCB1 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5243 |
EC number |
7.6.2.1: Linked to the hydrolysis of a nucleoside triphosphate |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
11 structures for P08183
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 6C0V | EM | 340 A | A | 1-1280 | PDB |
| 6FN1 | EM | 358 A | A | 32-1279 | PDB |
| 6FN4 | EM | 414 A | A | 1-1279 | PDB |
| 6QEX | EM | 360 A | A | 1-1280 | PDB |
| 7A65 | EM | 390 A | A | 1-1280 | PDB |
| 7A69 | EM | 320 A | A | 1-1280 | PDB |
| 7A6C | EM | 360 A | A | 1-1280 | PDB |
| 7A6E | EM | 360 A | A | 1-1280 | PDB |
| 7A6F | EM | 350 A | A | 1-1280 | PDB |
| 7O9W | EM | 350 A | A | 1-1280 | PDB |
| AF-P08183-F1 | Predicted | AlphaFoldDB |
1135 variants for P08183
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs202002337 RCV001334606 CA4328584 |
157 | R>Q | Variant assessed as Somatic; 0.0 impact. Inflammatory bowel disease 13 [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001335478 rs200823786 CA162470471 |
160 | I>M | Inflammatory bowel disease 13 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
VAR_013361 RCV000835733 CA179699 rs2032582 RCV001028649 RCV000152717 RCV000014698 |
893 | S>A | Inflammatory bowel disease 13 common allele; associated with susceptibility to IBD13; has decreased enzyme activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_013362 rs2032582 RCV000429867 CA179696 RCV000152713 |
893 | S>T | Neoplasm of ovary rare allele [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002552432 CA368039869 RCV001029499 rs1584829608 |
1118 | Q>E | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001028686 rs199676098 CA4327737 RCV002282429 |
1183 | R>C | Inflammatory bowel disease 13 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs201459845 CA162474196 |
2 | D>G | No |
ClinGen Ensembl |
|
| TCGA novel | 2 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1320562631 CA368094364 |
2 | D>N | No |
ClinGen gnomAD |
|
|
CA4328724 rs747238624 |
5 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780204251 CA4328723 |
6 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA368094337 rs780204251 |
6 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA368094330 rs758755760 |
7 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs758755760 CA4328722 |
7 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1429920034 CA368094329 |
7 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA368094331 rs758755760 |
7 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328721 rs146259092 |
8 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368094323 rs1373721748 |
8 | N>T | No |
ClinGen gnomAD |
|
|
rs1348388210 CA368094309 |
10 | G>E | No |
ClinGen gnomAD |
|
|
CA368094311 rs1457629148 |
10 | G>R | No |
ClinGen gnomAD |
|
|
CA368094294 rs1430496324 COSM197671 |
12 | K>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs779268249 CA4328720 |
12 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1092646 rs1390637727 CA368094278 |
14 | K>N | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA368094280 rs1584914371 |
14 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 16 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760162850 CA4328715 |
17 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328717 rs28381804 VAR_022276 |
17 | F>L | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA4328716 rs763540261 |
17 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA162474194 rs200061099 |
18 | K>Q | No |
ClinGen Ensembl |
|
|
CA4328713 rs200915526 |
19 | L>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4328714 rs41304191 |
19 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001029248 CA4328712 rs9282564 VAR_014704 |
21 | N>D | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA162474190 rs9282564 |
21 | N>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs9282564 CA162474189 |
21 | N>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 22 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754610572 CA4328694 |
26 | D>V | No |
ClinGen ExAC |
|
| TCGA novel | 26 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368094180 rs1424498745 |
27 | K>E | No |
ClinGen TOPMed |
|
|
CA368094178 rs1202446124 |
27 | K>T | No |
ClinGen gnomAD |
|
|
RCV001029272 rs1584911190 |
28 | K>missing | No |
ClinVar dbSNP |
|
|
CA162473763 rs112801674 |
28 | K>R | No |
ClinGen TOPMed |
|
|
rs112801674 CA368094170 |
28 | K>T | No |
ClinGen TOPMed |
|
|
rs1257107888 CA368094140 |
32 | P>R | No |
ClinGen gnomAD |
|
|
rs751270575 CA4328693 RCV001028456 |
32 | P>T | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
RCV001028457 CA368094132 rs1584911173 |
33 | T>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 33 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584911161 RCV001028459 CA368094129 |
34 | V>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328692 COSM1092644 rs533117495 |
34 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA162473762 rs934040996 |
35 | S>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 38 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371192766 COSM485676 CA4328689 |
39 | M>I | kidney [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA162473761 rs201917713 |
39 | M>V | No |
ClinGen TOPMed |
|
| TCGA novel | 40 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328671 COSM1698853 rs761584848 |
41 | R>C | Variant assessed as Somatic; 0.0 impact. central_nervous_system skin [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs199551851 CA4328670 COSM1092642 |
41 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA162472589 rs201564736 |
42 | Y>C | No |
ClinGen TOPMed |
|
|
CA4328668 rs759680987 |
43 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001028487 rs957318449 CA162472588 |
43 | S>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328667 rs774528779 |
44 | N>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA162472587 rs774528779 |
44 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162472586 rs1202183 VAR_055423 |
44 | N>S | No |
ClinGen UniProt Ensembl dbSNP |
|
| TCGA novel | 47 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368093764 rs1250463898 |
47 | D>Y | No |
ClinGen gnomAD |
|
|
rs139583955 CA4328666 |
48 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4328664 rs192850609 |
49 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202240722 CA4328665 |
49 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs537546318 CA4328663 |
50 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781755669 CA4328661 |
51 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA162472585 rs372174859 |
53 | V>G | No |
ClinGen Ensembl |
|
| TCGA novel | 54 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1200080064 CA368093670 |
55 | T>I | No |
ClinGen TOPMed |
|
|
rs1242728976 CA368093661 |
56 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA162472584 rs1032636546 |
57 | A>V | No |
ClinGen Ensembl |
|
|
rs1584902466 RCV001029290 |
58 | A>missing | No |
ClinVar dbSNP |
|
|
rs1584902462 CA368093641 |
58 | A>G | No |
ClinGen Ensembl |
|
|
rs1584902458 CA368093636 |
59 | I>L | No |
ClinGen Ensembl |
|
|
CA162472583 rs41315618 |
60 | I>L | No |
ClinGen Ensembl |
|
|
CA368093606 rs1584902444 |
61 | H>P | No |
ClinGen Ensembl |
|
|
CA368093610 rs1435532727 |
61 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1584902437 CA368093593 RCV001029291 |
62 | G>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328657 rs750056009 |
63 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368093584 rs1388112904 |
63 | A>V | No |
ClinGen gnomAD |
|
|
RCV001029292 CA368093570 rs1584902425 |
65 | L>F | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV001029293 rs1584902411 |
67 | L>missing | No |
ClinVar dbSNP |
|
|
rs1169254481 CA368093551 |
67 | L>F | No |
ClinGen TOPMed |
|
|
rs865799545 CA162472582 |
68 | M>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 71 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162472581 rs200177995 |
76 | T>I | No |
ClinGen Ensembl |
|
| TCGA novel | 77 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs202150907 CA162472580 |
78 | I>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs202150907 CA4328654 |
78 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_055424 rs9282565 CA4328653 |
80 | A>E | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
|
rs1584902369 CA368093378 RCV001029294 |
82 | A>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368093369 rs1201503261 |
82 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 83 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001029295 rs764061195 CA4328652 |
84 | N>H | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 86 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1266957400 CA368093310 |
87 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA368093300 rs1257387920 |
88 | L>R | No |
ClinGen gnomAD |
|
|
CA368093288 RCV001029297 rs1584902336 |
89 | M>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368093294 rs35810889 |
89 | M>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs35810889 CA4328651 |
89 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 90 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1311363553 CA368093271 |
91 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs751592416 CA4328649 |
91 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs751592416 CA368093268 |
91 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA368093247 rs1563063922 |
93 | T>A | No |
ClinGen Ensembl |
|
|
CA4328647 rs763019957 |
93 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs528004506 CA4328646 |
94 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368091711 rs1345523838 |
96 | S>N | No |
ClinGen gnomAD |
|
|
rs199807788 CA162470851 |
97 | D>Y | No |
ClinGen Ensembl |
|
|
rs1273859083 CA368091682 |
98 | I>S | No |
ClinGen gnomAD |
|
|
CA162470850 rs201641280 |
99 | N>S | No |
ClinGen Ensembl |
|
|
CA162470849 rs200693386 |
100 | D>G | No |
ClinGen gnomAD |
|
|
COSM1092639 CA368091651 rs1288374568 |
101 | T>A | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
RCV001029312 rs1584890130 CA368091648 |
101 | T>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
COSM1187346 CA4328630 rs199607036 CA368091643 |
102 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4328629 rs763159622 |
102 | G>V | No |
ClinGen ExAC gnomAD |
|
| VAR_015001 | 103 | F>L | No | UniProt | |
|
rs201396865 CA162470848 |
103 | F>S | No |
ClinGen Ensembl |
|
|
CA4328628 rs750577831 |
104 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs765543439 CA4328627 |
105 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs765543439 CA368091614 |
105 | M>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001029313 CA368091582 rs1584890095 |
108 | E>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
| VAR_018351 | 108 | E>K | No | UniProt | |
|
CA4328625 rs189559454 |
109 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA162470847 rs201389507 |
110 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs769142496 CA4328624 |
110 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761202837 CA368091549 |
111 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761202837 CA4328623 |
111 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368091526 rs1231090084 |
113 | R>G | No |
ClinGen gnomAD |
|
|
CA368091080 rs374713722 |
114 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4328605 rs374713722 |
114 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368091065 rs1366437650 |
116 | Y>C | No |
ClinGen gnomAD |
|
|
rs1584886969 CA368091060 |
117 | Y>D | No |
ClinGen Ensembl |
|
|
rs1584886962 CA368091058 RCV001029335 |
117 | Y>F | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 117 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368091043 rs1428844378 |
119 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4328603 rs201352004 |
120 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368091017 rs759986853 |
123 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001028518 rs759986853 CA4328602 |
123 | A>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1310242458 CA368091007 |
125 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA368091009 rs1310242458 |
125 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA4328600 rs368578071 |
127 | V>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748883796 CA4328599 |
130 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA368090973 rs1185744873 |
131 | I>V | No |
ClinGen gnomAD |
|
|
CA4328597 rs769545558 |
132 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1248102071 CA368090934 |
136 | W>* | No |
ClinGen gnomAD |
|
|
rs1410820663 CA368090924 |
137 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
CA368090926 rs1432167827 |
137 | C>F | No |
ClinGen TOPMed |
|
|
CA4328594 rs754901302 |
141 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA4328593 rs557338866 |
142 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1046070012 CA162470475 |
143 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs61607171 CA4328592 |
144 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368090887 rs1459866086 |
144 | I>V | No |
ClinGen gnomAD |
|
|
rs1295245429 CA368090879 |
145 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs757337057 CA4328591 |
145 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 146 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328590 rs754111890 |
151 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162470474 rs754111890 |
151 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162470473 rs199924747 |
152 | F>V | No |
ClinGen TOPMed |
|
|
rs1563055802 CA368090820 |
153 | H>R | No |
ClinGen Ensembl |
|
| TCGA novel | 154 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162470472 rs149518139 |
155 | I>V | No |
ClinGen ESP |
|
|
RCV001028520 CA4328586 rs753065601 |
156 | M>I | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs756530200 CA4328587 |
156 | M>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
rs1363838319 CA368090796 COSM1092638 |
157 | R>* | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs202002337 COSM397874 CA4328585 |
157 | R>L | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
| TCGA novel | 158 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001028521 rs1584886787 |
159 | E>missing | No |
ClinVar dbSNP |
|
|
rs1183122171 CA368090770 |
161 | G>C | No |
ClinGen TOPMed |
|
|
rs1184150141 CA368090758 |
162 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs765901566 CA4328582 |
163 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs762489515 CA4328581 |
165 | V>G | No |
ClinGen ExAC gnomAD |
|
|
RCV001028522 COSM747726 CA368090741 rs1584886768 |
165 | V>M | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
CA162470470 rs199509670 |
166 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs769387998 CA4328579 |
167 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs776417319 CA4328577 |
168 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs61122623 RCV001028523 CA4328578 |
168 | V>I | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 169 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368090709 rs1584886727 |
170 | E>G | No |
ClinGen Ensembl |
|
|
rs200753045 CA4328576 |
173 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4328574 rs199808236 |
174 | R>* | No |
ClinGen ExAC gnomAD |
|
|
CA368090685 rs201280497 |
174 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201280497 RCV001028525 CA4328573 |
174 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs375817253 CA4328571 |
175 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
RCV001028526 rs1584886694 |
176 | T>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 178 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 178 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201302394 CA162470425 |
179 | V>A | No |
ClinGen 1000Genomes |
|
|
CA4328557 rs760430324 |
181 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368090629 rs760430324 |
181 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1188362511 CA368090622 |
182 | I>T | No |
ClinGen TOPMed |
|
|
COSM1137754 RCV000879421 rs60419673 CA4328556 |
183 | N>S | kidney [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000014697 rs1128501 CA123373 VAR_015002 |
185 | G>V | a colchicine-selected multidrug-resistant cell line; confers increased resistance to colchicine [UniProt] | No |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs1455450939 CA368090595 |
186 | I>T | No |
ClinGen TOPMed |
|
|
rs745836011 CA4328554 |
187 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328553 rs143782625 |
188 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200860057 CA162470421 |
188 | D>V | No |
ClinGen Ensembl |
|
| TCGA novel | 190 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368090569 rs1381284304 |
190 | I>T | No |
ClinGen gnomAD |
|
|
rs770008344 CA368090545 COSM747727 CA4328552 |
193 | F>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC gnomAD NCI-TCGA |
| TCGA novel | 197 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1469108355 CA368090519 |
197 | M>T | No |
ClinGen gnomAD |
|
|
rs201810386 CA162470420 |
197 | M>V | No |
ClinGen Ensembl |
|
|
rs201234319 CA162470419 |
198 | A>P | No |
ClinGen Ensembl |
|
|
rs748390713 CA4328551 |
199 | T>A | No |
ClinGen ExAC TOPMed |
|
|
CA368090505 rs1403432068 RCV001029341 |
199 | T>I | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs781337433 CA4328550 |
200 | F>L | No |
ClinGen ExAC gnomAD |
|
|
RCV001029342 CA368090498 rs1584886072 |
200 | F>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368090483 rs1584886062 RCV001029343 |
203 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1584886053 CA368090464 |
205 | I>M | No |
ClinGen Ensembl |
|
|
CA4328549 rs755346039 |
205 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1331678185 CA368090460 |
206 | V>A | No |
ClinGen TOPMed |
|
|
CA4328548 rs371995997 |
210 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA162470417 rs950846830 |
210 | R>H | No |
ClinGen Ensembl |
|
|
CA368090428 rs1584886037 RCV001029344 |
211 | G>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA162470416 rs867790464 |
212 | W>* | No |
ClinGen Ensembl |
|
|
rs780427778 CA4328547 |
213 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs865986777 CA162470415 |
215 | T>I | No |
ClinGen Ensembl |
|
| TCGA novel | 215 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001029345 rs758834776 CA4328546 |
220 | A>T | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 220 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162470414 rs201669414 |
221 | I>M | No |
ClinGen TOPMed |
|
|
CA162470413 rs138302009 |
222 | S>G | No |
ClinGen ESP TOPMed |
|
|
rs1183298571 CA368090322 |
229 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1183298571 CA368090323 |
229 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4328544 rs200191280 |
230 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs750938138 CA4328545 |
230 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA4328543 rs201649109 |
231 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 232 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328509 rs747181596 |
237 | S>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 237 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs370448121 CA4328507 |
241 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 243 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780518645 CA162469887 |
244 | L>F | No |
ClinGen Ensembl |
|
| TCGA novel | 245 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328504 rs201722148 |
246 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA368088893 rs1214452761 |
247 | Y>C | No |
ClinGen gnomAD |
|
|
rs1242341613 CA368088899 |
247 | Y>H | No |
ClinGen gnomAD |
|
| TCGA novel | 248 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368088885 rs1444836423 |
248 | A>T | No |
ClinGen gnomAD |
|
| rs955978982 | 250 | A>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328501 rs755708192 |
250 | A>P | No |
ClinGen ExAC gnomAD |
|
|
RCV001028546 CA368088846 rs1259527290 |
251 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368088821 RCV001028547 rs1584881721 |
253 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368088783 rs1313299337 |
255 | E>D | No |
ClinGen gnomAD |
|
|
CA368088768 rs1362919289 |
256 | E>A | No |
ClinGen gnomAD |
|
|
rs1362919289 CA368088770 |
256 | E>G | No |
ClinGen gnomAD |
|
|
rs1216695241 CA368088779 |
256 | E>K | No |
ClinGen gnomAD |
|
|
RCV001028549 CA368088748 rs1584881689 |
258 | L>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1425167192 CA368088704 |
261 | I>N | No |
ClinGen gnomAD |
|
|
VAR_055425 CA4328497 rs36008564 RCV000883246 |
261 | I>V | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA368088695 rs1184324936 |
262 | R>G | No |
ClinGen TOPMed |
|
|
rs202177823 CA4328496 |
262 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368088672 rs1430155491 |
263 | T>I | No |
ClinGen gnomAD |
|
|
rs200067310 CA162469884 |
265 | I>T | No |
ClinGen Ensembl |
|
|
RCV001029351 CA368088640 rs1584881633 |
266 | A>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs773259441 CA4328494 |
266 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs764072893 CA4328493 |
272 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1222604496 COSM1092634 CA368088545 |
273 | E>* | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA368088541 rs1162562260 |
273 | E>G | No |
ClinGen TOPMed |
|
|
rs202097303 CA4328492 |
275 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 276 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1297328873 CA368064074 |
277 | Y>* | No |
ClinGen gnomAD |
|
|
rs767592386 CA4328471 |
278 | N>S | No |
ClinGen ExAC |
|
|
rs200922799 CA162125998 |
280 | N>H | No |
ClinGen Ensembl |
|
|
rs200148661 CA4328470 |
285 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774696910 CA4328469 |
287 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1176774424 CA368063995 |
289 | I>V | No |
ClinGen gnomAD |
|
|
CA4328468 rs771196019 |
292 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4328467 rs763416526 |
294 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA162125978 rs200629342 |
296 | N>S | No |
ClinGen Ensembl |
|
|
rs770289036 CA4328464 |
298 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4328462 rs780790071 |
299 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs768339438 CA4328461 |
300 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1584875429 CA368063919 RCV001029370 |
301 | A>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1203320017 CA368063909 |
302 | A>G | No |
ClinGen gnomAD |
|
|
CA4328460 rs746654940 |
303 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1584875420 CA368063904 RCV001029371 |
303 | F>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1262510614 CA368063892 |
305 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA4328458 rs200676994 |
307 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328459 rs779792612 |
307 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs199591776 CA162125942 |
308 | A>V | No |
ClinGen Ensembl |
|
|
rs1237664337 CA368063858 |
311 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs979090956 CA162125923 |
313 | A>G | No |
ClinGen Ensembl |
|
|
rs1174023694 CA368063846 |
313 | A>P | No |
ClinGen TOPMed |
|
|
rs1189919755 CA368063830 |
315 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4328456 rs778606266 |
315 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs934392121 CA162125902 |
316 | Y>C | No |
ClinGen TOPMed |
|
|
rs1045385582 CA162125894 |
319 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs753790377 CA4328454 |
319 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA368063801 rs1363711355 |
320 | L>S | No |
ClinGen gnomAD |
|
|
CA162125880 rs201444664 |
320 | L>V | No |
ClinGen gnomAD |
|
|
rs1392678819 CA368063794 |
321 | V>A | No |
ClinGen TOPMed |
|
|
rs767576038 CA4328453 |
321 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4328452 rs573094394 |
322 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1584875299 RCV001029373 CA368063775 |
325 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368063763 rs1330170800 |
326 | Y>C | No |
ClinGen TOPMed |
|
|
CA162125851 rs202163510 |
329 | G>R | No |
ClinGen Ensembl |
|
|
CA4328450 rs766673892 |
332 | L>R | No |
ClinGen ExAC |
|
|
CA368063679 rs1354050546 |
337 | S>Y | No |
ClinGen gnomAD |
|
|
rs773413194 CA4328422 |
338 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA162123538 rs914518065 |
340 | I>M | No |
ClinGen Ensembl |
|
|
CA368063658 RCV001028567 rs1584872372 |
341 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368063655 rs1584872367 |
341 | G>V | No |
ClinGen Ensembl |
|
|
rs1584872360 RCV001028568 |
342 | A>missing | No |
ClinVar dbSNP |
|
|
rs1368324209 CA368063652 |
342 | A>T | No |
ClinGen TOPMed |
|
| TCGA novel | 344 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761114696 CA4328421 |
345 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs771498736 CA4328419 |
348 | A>T | No |
ClinGen ExAC |
|
|
rs770682446 CA4328416 |
352 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs200966236 CA4328415 |
354 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1584872301 CA368063564 RCV001028570 |
355 | F>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1168879904 CA368063558 |
356 | A>E | No |
ClinGen gnomAD |
|
|
CA162123493 rs777570345 COSM1092628 |
356 | A>S | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs777570345 CA4328414 |
356 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1168879904 CA368063556 RCV001028571 |
356 | A>V | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1421770056 CA368063543 |
358 | A>G | No |
ClinGen gnomAD |
|
|
CA368063538 rs1201676452 |
359 | R>K | No |
ClinGen gnomAD |
|
|
CA162123488 rs199886416 |
360 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1308529308 CA368063529 |
361 | A>T | No |
ClinGen gnomAD |
|
|
CA162123470 rs201484093 |
361 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 362 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1269483312 CA368063499 |
365 | I>N | No |
ClinGen gnomAD |
|
|
CA4328411 rs200671728 |
366 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328410 rs199766539 |
369 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757574551 CA4328407 |
371 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs931668312 CA162123449 |
371 | N>S | No |
ClinGen Ensembl |
|
|
CA4328408 rs765605694 |
371 | N>Y | No |
ClinGen ExAC TOPMed |
|
|
rs143333791 CA4328391 |
373 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199578136 RCV001028579 CA4328390 |
374 | S>N | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs754128242 CA4328389 |
377 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1453587307 CA368063301 |
377 | S>N | No |
ClinGen gnomAD |
|
|
CA368063286 rs1394100410 |
378 | Y>C | No |
ClinGen TOPMed |
|
|
CA4328387 rs762322710 |
379 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4328386 rs753217589 |
381 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368063234 rs1410043164 |
382 | G>E | No |
ClinGen gnomAD |
|
|
CA368063239 rs1356023286 COSM602532 |
382 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs767962530 CA4328385 |
383 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA368063226 rs767962530 |
383 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
RCV001028580 rs1584871955 CA368063189 |
385 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328383 rs751032232 |
387 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA368063162 rs1584871947 RCV001029383 |
387 | N>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs149196148 CA4328382 |
388 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328380 rs200199237 |
393 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs201346512 CA4328381 |
393 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA368063065 rs1285534379 |
395 | R>G | No |
ClinGen gnomAD |
|
|
rs761558156 CA4328378 |
397 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4328377 rs144933300 |
398 | H>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1247179537 CA368063008 |
399 | F>S | No |
ClinGen gnomAD |
|
|
rs2229109 CA162123283 |
400 | S>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000174262 VAR_015003 rs2229109 CA200911 |
400 | S>N | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA368062976 rs746946995 RCV001029385 |
403 | S>C | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA4328376 rs746946995 |
403 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
RCV001029386 CA368062974 rs1584871861 |
404 | R>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328375 rs201352027 COSM1452590 |
404 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs879151844 CA162123260 |
405 | K>R | No |
ClinGen Ensembl |
|
|
rs200870777 CA4328374 |
406 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs140214314 CA4328373 |
407 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4328372 rs777898226 |
407 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs140214314 CA368062956 |
407 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 408 | K>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584871842 CA368062949 RCV001029387 |
408 | K>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1584871639 RCV001029393 CA368062931 |
409 | I>F | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1419793187 CA368062928 |
409 | I>N | No |
ClinGen gnomAD |
|
|
rs921633135 CA162123137 |
410 | L>S | No |
ClinGen Ensembl |
|
|
rs1476587846 CA368062912 |
412 | G>S | No |
ClinGen gnomAD |
|
|
rs749429338 CA4328356 |
416 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA162123124 rs201491802 |
416 | K>R | No |
ClinGen gnomAD |
|
|
CA368062882 rs1364926780 |
417 | V>M | No |
ClinGen TOPMed |
|
|
RCV001029395 CA368062867 rs1584871582 |
419 | S>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368062848 RCV001029396 rs1584871577 |
420 | G>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs773368293 CA4328355 |
422 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162123104 rs967941491 |
423 | V>L | No |
ClinGen TOPMed |
|
|
CA162123093 rs913766377 |
424 | A>T | No |
ClinGen TOPMed |
|
|
rs1216856095 CA368062769 |
427 | G>E | No |
ClinGen gnomAD |
|
|
rs952222278 CA162123083 |
428 | N>S | No |
ClinGen gnomAD |
|
|
rs201462032 CA4328353 |
431 | C>W | No |
ClinGen ExAC gnomAD |
|
|
rs1584871513 CA368062704 RCV001028581 |
432 | G>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs201678613 CA4328352 RCV001028582 |
433 | K>E | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA4328350 rs747479750 COSM747732 |
434 | S>I | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA |
|
RCV001028584 rs1584871494 CA368062683 |
434 | S>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1291504646 CA368062637 |
436 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 437 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328347 rs749859568 |
439 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs756800740 CA4328345 RCV001028587 |
440 | M>I | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA4328346 rs764807184 |
440 | M>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 441 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368062538 RCV001028588 rs1584871437 |
442 | R>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328344 rs201725784 |
443 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
RCV001028589 rs201725784 CA368062531 |
443 | L>I | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1469116728 CA368062501 |
447 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
CA368062498 rs139611979 RCV001028590 |
448 | E>* | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4328343 rs139611979 |
448 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA368062483 rs1223199758 |
450 | M>L | No |
ClinGen gnomAD |
|
|
rs201987648 CA162123027 |
450 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
rs201987648 CA162123036 |
450 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1313046379 CA368062459 |
452 | S>G | No |
ClinGen gnomAD |
|
|
CA162122902 rs202187982 |
454 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV001029401 CA368062445 rs1584871159 |
454 | D>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs752505100 CA4328324 |
455 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA368062433 rs1475629891 |
456 | Q>E | No |
ClinGen TOPMed |
|
|
CA4328323 rs767429416 |
457 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1181024146 CA368062426 |
457 | D>N | No |
ClinGen TOPMed |
|
|
COSM318429 rs1584871120 CA368062400 RCV001029402 |
460 | T>N | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
CA4328321 rs751575002 |
461 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1360458780 CA368062398 |
461 | I>V | No |
ClinGen gnomAD |
|
|
rs761999329 CA4328320 |
462 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs559003378 CA4328318 |
463 | V>L | No |
ClinGen 1000Genomes ExAC |
|
|
rs768822271 CA4328317 |
464 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA4328316 rs760890850 |
464 | R>M | No |
ClinGen ExAC gnomAD |
|
|
rs201178758 CA4328315 |
464 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA4328314 rs772482084 |
467 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM242734 rs1387356833 CA368062363 |
467 | R>W | Variant assessed as Somatic; impact. endometrium central_nervous_system prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1187188802 CA368062351 |
469 | I>V | No |
ClinGen gnomAD |
|
|
rs1455168926 CA368062341 |
470 | I>T | No |
ClinGen TOPMed |
|
|
rs1488572511 CA368062336 |
471 | G>C | No |
ClinGen gnomAD |
|
|
rs1584871048 CA368062335 |
471 | G>D | No |
ClinGen Ensembl |
|
|
CA162122863 rs200183659 |
473 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA4328313 rs200183659 |
473 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA368062300 rs1389565545 |
476 | E>D | No |
ClinGen gnomAD |
|
|
CA4328312 rs779516199 |
477 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA162122854 rs930790323 |
479 | L>F | No |
ClinGen Ensembl |
|
|
CA368062280 rs1345375955 |
480 | F>L | No |
ClinGen TOPMed |
|
|
rs1361374723 CA368062268 |
481 | A>D | No |
ClinGen gnomAD |
|
|
rs199720786 CA4328311 |
482 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 483 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1338355304 CA368062225 |
488 | I>V | No |
ClinGen gnomAD |
|
|
COSM1092624 CA4328308 rs142600685 |
489 | R>C | endometrium central_nervous_system [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs750696034 COSM1092623 CA162122805 |
489 | R>H | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA4328307 rs750696034 |
489 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs781123430 CA4328306 |
490 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs754872565 CA4328305 |
492 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199941458 CA4328304 |
492 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328302 rs762825426 |
495 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553667487 CA4328300 |
497 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4328299 rs760874215 |
498 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1171458375 CA368062163 |
498 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA4328298 rs201761318 |
500 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA368062134 rs1191361542 |
502 | K>* | No |
ClinGen gnomAD |
|
|
rs772393045 CA4328297 |
504 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs759995973 CA4328296 |
506 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328295 rs771429713 |
507 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771429713 CA4328294 |
507 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs982124468 CA162122721 |
508 | N>K | No |
ClinGen Ensembl |
|
|
CA4328293 rs535338471 |
508 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA162122717 rs200942041 |
511 | D>G | No |
ClinGen Ensembl |
|
|
rs1218688694 CA368062053 |
514 | M>T | No |
ClinGen gnomAD |
|
|
CA4328292 rs148455513 |
514 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368061992 rs1275791615 |
518 | H>Q | No |
ClinGen gnomAD |
|
|
CA368062002 rs1468184660 |
518 | H>Y | No |
ClinGen TOPMed |
|
|
CA4328278 rs774711495 |
521 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA162122416 rs201159898 |
522 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368061841 rs1398389130 |
522 | T>N | No |
ClinGen gnomAD |
|
|
CA4328277 rs201159898 |
522 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368061834 rs1324520636 |
523 | L>V | No |
ClinGen TOPMed |
|
|
CA368061820 RCV001028601 rs1584870562 |
524 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs773925485 CA4328276 |
526 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867772567 CA162122401 |
526 | E>V | No |
ClinGen Ensembl |
|
|
CA4328273 rs769400173 |
529 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs769400173 RCV001028602 CA368061747 |
529 | A>T | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA368061731 rs1477018410 |
531 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
CA4328270 rs768283170 |
532 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1274564250 CA368061725 |
532 | S>T | No |
ClinGen TOPMed |
|
|
rs1584870522 RCV001028603 CA368061715 |
534 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1179026893 CA368061707 |
534 | G>V | No |
ClinGen gnomAD |
|
|
rs989511697 CA162122348 |
535 | Q>R | No |
ClinGen Ensembl |
|
|
CA4328269 rs746652079 |
536 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200631297 CA162122344 |
536 | K>R | No |
ClinGen Ensembl |
|
|
CA4328267 rs758194199 COSM158793 |
538 | R>S | breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs201188762 CA368061607 |
540 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA162122322 rs201188762 |
540 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA368061579 rs778869420 |
541 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1353480925 CA368061593 |
541 | I>V | No |
ClinGen gnomAD |
|
|
RCV001028604 CA368061576 rs1584870462 |
542 | A>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328264 rs757210054 |
543 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374940464 RCV001028605 COSM1092619 CA368061550 |
543 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar NCI-TCGA dbSNP gnomAD |
|
rs1374940464 CA368061552 |
543 | R>P | No |
ClinGen gnomAD |
|
|
CA4328262 rs202111093 |
544 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162122302 rs974595753 |
544 | A>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 545 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 545 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 546 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328259 rs199852575 |
547 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4328258 rs763454753 |
547 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 548 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 549 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162122247 rs1018838697 |
549 | P>S | No |
ClinGen gnomAD |
|
|
CA368061477 rs1018838697 |
549 | P>T | No |
ClinGen gnomAD |
|
|
rs865945115 CA162122235 |
552 | L>F | No |
ClinGen Ensembl |
|
|
CA368061373 rs762410817 |
555 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328255 rs762410817 |
555 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368061350 rs1236320337 |
556 | E>D | No |
ClinGen gnomAD |
|
|
rs371019082 CA4328254 |
557 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370804452 CA4328253 |
558 | T>M | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4328250 rs201641803 |
561 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 562 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368061213 rs1177169246 |
565 | S>N | No |
ClinGen gnomAD |
|
|
CA4328247 VAR_022277 rs28381902 |
566 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1355931317 CA368061178 |
567 | A>T | No |
ClinGen gnomAD |
|
|
CA368061098 RCV001028607 rs1584870326 |
571 | V>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4328244 RCV001028606 rs755085099 |
571 | V>M | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs201155718 CA162122129 |
574 | D>E | No |
ClinGen Ensembl |
|
|
rs770568187 CA162122147 |
574 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA162122134 rs199659428 |
574 | D>V | No |
ClinGen TOPMed |
|
|
rs770568187 CA162122142 |
574 | D>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 576 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1169358648 CA368060428 |
576 | A>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1423665718 CA368060431 |
576 | A>P | No |
ClinGen gnomAD |
|
|
rs1021879980 CA162119332 |
578 | K>R | No |
ClinGen Ensembl |
|
|
rs780182297 CA4328224 |
579 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328223 rs202017838 |
580 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4328222 rs202017838 |
580 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200224345 CA162119317 |
580 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA368060404 rs1375846757 |
581 | T>A | No |
ClinGen TOPMed |
|
|
CA4328221 rs779414215 |
581 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 582 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368060390 rs1458392780 |
583 | I>T | No |
ClinGen gnomAD |
|
|
rs1200702337 CA368060393 |
583 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA368060387 rs1257424474 |
584 | V>M | No |
ClinGen gnomAD |
|
|
rs1224728157 CA368060377 |
585 | I>T | No |
ClinGen Ensembl |
|
|
CA4328220 rs757734033 |
586 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs201122883 CA4328219 RCV001029421 |
588 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs966775931 CA162119273 |
590 | S>F | No |
ClinGen TOPMed |
|
|
CA4328218 rs764459400 |
591 | T>A | No |
ClinGen ExAC gnomAD |
|
|
COSM3641919 rs28381914 CA4328217 VAR_022278 |
593 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA4328216 rs56107566 |
593 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs28381914 CA162119267 |
593 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1280797442 CA368060324 |
594 | N>K | No |
ClinGen TOPMed |
|
|
rs767030297 CA4328215 |
595 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs759177745 RCV001029422 CA368060316 COSM1550437 |
596 | D>H | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC dbSNP gnomAD |
|
rs759177745 CA4328214 |
596 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA4328212 rs199931362 COSM3698573 |
597 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA162119233 rs199931362 |
597 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1584866716 CA368060291 RCV001029423 |
598 | I>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs2235036 CA4328210 VAR_055426 |
599 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA4328208 rs748125208 |
600 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA4328209 rs748125208 |
600 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs201195687 CA162119227 |
601 | F>I | No |
ClinGen Ensembl |
|
|
rs201365503 CA4328206 |
602 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201365503 CA368060229 |
602 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757574649 CA4328203 |
603 | D>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4328205 rs746054969 |
603 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA368060212 rs746054969 |
603 | D>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 605 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749574370 CA4328202 |
606 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749574370 CA368060160 |
606 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328201 rs149359465 |
607 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 608 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368060069 rs1213042982 |
610 | G>R | No |
ClinGen gnomAD |
|
|
rs57001392 CA4328200 |
613 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4328198 rs767011913 |
614 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA368059929 rs1242139767 |
615 | L>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1242139767 CA368059927 |
615 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1277845808 CA368059934 |
615 | L>V | No |
ClinGen gnomAD |
|
|
CA162119150 rs1048327054 |
616 | M>I | No |
ClinGen Ensembl |
|
|
rs1308127826 CA368059903 |
616 | M>K | No |
ClinGen gnomAD |
|
|
CA368059824 COSM318431 rs1435673611 |
619 | K>E | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs765970736 CA4328195 |
620 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328193 rs772821889 |
623 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs945867836 CA162119143 |
624 | K>Q | No |
ClinGen Ensembl |
|
|
rs141018820 CA4328192 |
624 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1160807373 CA368059639 |
627 | T>P | No |
ClinGen gnomAD |
|
|
CA368059621 rs1420748687 |
628 | M>V | No |
ClinGen gnomAD |
|
|
CA368059473 rs1373168864 |
631 | A>T | No |
ClinGen gnomAD |
|
|
CA368059454 rs1584865692 |
632 | G>R | No |
ClinGen Ensembl |
|
|
CA162118584 rs200457539 |
633 | N>D | No |
ClinGen Ensembl |
|
|
rs1203228011 CA368059432 |
633 | N>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs764906803 CA4328172 |
635 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1265709861 CA368059390 |
636 | E>* | No |
ClinGen gnomAD |
|
|
rs1265709861 CA368059393 |
636 | E>K | No |
ClinGen gnomAD |
|
|
CA368059353 rs1480244258 |
638 | E>A | No |
ClinGen TOPMed |
|
|
CA4328170 rs748496246 |
641 | A>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 642 | D>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328169 rs201352373 |
642 | D>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs528939709 CA4328167 |
646 | S>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 646 | S>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1563044388 CA368059200 |
647 | E>G | No |
ClinGen Ensembl |
|
|
CA4328166 rs771100656 |
647 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA4328165 rs773525613 |
648 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328164 rs773525613 |
648 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1415499957 CA368059188 |
648 | I>V | No |
ClinGen gnomAD |
|
|
rs1391697654 CA368059173 |
649 | D>N | No |
ClinGen gnomAD |
|
|
CA368059148 rs200378616 |
650 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200378616 CA4328163 |
650 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368059080 rs1402478835 |
654 | S>P | No |
ClinGen gnomAD |
|
|
rs1171481420 CA368059066 |
655 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA368059039 rs1478102663 |
656 | N>K | No |
ClinGen gnomAD |
|
|
CA162118557 rs200376045 |
656 | N>S | No |
ClinGen Ensembl |
|
|
CA368059023 rs1434727302 |
657 | D>E | No |
ClinGen gnomAD |
|
|
CA4328161 rs781571880 |
657 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1372487776 CA368059036 RCV001028615 |
657 | D>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1372487776 CA368059032 |
657 | D>Y | No |
ClinGen gnomAD |
|
|
rs769089888 CA4328160 |
661 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328158 rs35657960 |
662 | L>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145840638 CA4328157 |
665 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368058902 COSM1173340 rs1584865520 |
665 | K>R | oesophagus [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA4328156 rs750020655 |
666 | R>I | No |
ClinGen ExAC gnomAD |
|
|
RCV001028616 rs750020655 CA368058885 |
666 | R>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA368058877 rs1563044327 |
667 | S>P | No |
ClinGen Ensembl |
|
|
rs778576220 CA4328155 |
668 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs35023033 CA4328153 VAR_055427 |
669 | R>C | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4328152 rs146703713 |
669 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4328151 rs146703713 |
669 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368058866 rs35023033 |
669 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201298259 CA4328150 |
670 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 671 | S>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162118486 rs200178485 |
671 | S>N | No |
ClinGen gnomAD |
|
|
CA162118490 rs983438430 |
671 | S>R | No |
ClinGen gnomAD |
|
|
CA4328149 rs766339610 |
671 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs200859389 CA4328147 |
673 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs184290374 CA4328146 |
673 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 677 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs59340265 CA4328145 |
679 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs952145392 CA162118444 |
679 | D>H | No |
ClinGen gnomAD |
|
|
CA162118407 rs201355162 |
680 | R>G | No |
ClinGen TOPMed |
|
|
CA368058786 rs1323794979 |
682 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA368058787 rs1323794979 |
682 | L>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 683 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368058770 rs1027717457 |
684 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA162118394 rs1027717457 |
684 | T>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 687 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1043070641 CA162118393 |
687 | A>P | No |
ClinGen TOPMed |
|
|
CA368058751 rs1271391029 |
687 | A>V | No |
ClinGen TOPMed |
|
|
rs1189101528 CA368058174 |
689 | D>G | No |
ClinGen gnomAD |
|
|
rs921088140 CA162118032 |
690 | E>K | No |
ClinGen TOPMed |
|
|
CA368058138 rs1563044033 |
691 | S>T | No |
ClinGen Ensembl |
|
|
CA4328126 rs764417353 |
692 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 693 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4328125 rs760977802 |
694 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4328123 rs772563512 |
701 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 703 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773899676 CA4328121 |
706 | T>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 707 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584864743 CA368057968 RCV001029434 |
707 | E>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368057957 rs1331432775 |
708 | W>C | No |
ClinGen TOPMed |
|
|
CA162117994 rs200727539 |
710 | Y>* | No |
ClinGen Ensembl |
|
|
COSM1092612 CA368057913 rs1226611649 |
712 | V>A | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA4328120 rs576829142 |
713 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1286029307 CA368057904 |
713 | V>I | No |
ClinGen gnomAD |
|
|
CA4328119 rs748919574 |
714 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001029436 CA368057890 rs1584864725 |
714 | G>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368057861 rs1205336910 |
716 | F>L | No |
ClinGen TOPMed |
|
|
CA368057838 rs1584864714 RCV001029438 |
717 | C>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1563043965 CA368057811 |
719 | I>V | No |
ClinGen Ensembl |
|
|
CA162117969 rs1020594116 |
720 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1020594116 CA368057804 |
720 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1298586570 CA368057795 |
721 | N>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 725 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755856690 CA4328116 |
725 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA4328114 rs780857986 |
727 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs754891060 CA368057749 |
728 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1419673180 CA368057729 |
731 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1392639104 CA368057705 |
735 | I>V | No |
ClinGen TOPMed |
|
|
CA162117929 rs41316450 |
736 | I>K | No |
ClinGen Ensembl |
|
|
rs200519232 CA162117933 |
736 | I>L | No |
ClinGen gnomAD |
|
|
CA162117923 rs199580885 |
736 | I>M | No |
ClinGen Ensembl |
|
|
CA368057247 rs1296251129 |
738 | V>I | No |
ClinGen gnomAD |
|
|
rs769508094 CA4328096 |
740 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM747738 CA368057224 rs1359542599 |
741 | R>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA4328095 rs747772100 |
744 | D>E | No |
ClinGen ExAC gnomAD |
|
| rs756214997 | 744 | D>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368057194 RCV001028637 rs1584861968 |
745 | P>L | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV001028638 rs1584861959 CA368057191 |
746 | E>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 746 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584861940 RCV001028640 CA368057174 |
747 | T>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368057180 RCV001028639 rs1584861948 |
747 | T>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1323297861 CA368057152 COSM78860 |
749 | R>* | lung ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs754765644 COSM1452582 CA4328093 |
749 | R>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs754765644 CA4328092 COSM1643400 |
749 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine stomach [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4328091 rs200152744 |
753 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368057073 rs1408739324 |
754 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA368057075 rs1271272875 |
754 | L>W | No |
ClinGen TOPMed |
|
|
CA162116157 rs975854106 |
757 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA368057028 rs1453981427 |
758 | L>* | No |
ClinGen gnomAD |
|
|
CA162116155 rs375295612 |
759 | F>V | No |
ClinGen ESP TOPMed |
|
|
rs1251424548 CA368057004 |
760 | L>V | No |
ClinGen gnomAD |
|
|
rs1584861827 CA368056993 |
761 | A>T | No |
ClinGen Ensembl |
|
|
CA4328090 rs779916152 |
765 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 766 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162116132 rs149038363 |
768 | I>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA368056893 rs1250849808 |
769 | T>A | No |
ClinGen gnomAD |
|
|
rs753847579 CA4328088 |
772 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs199564535 CA4328068 |
774 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA162114933 rs372521819 |
776 | T>K | No |
ClinGen ESP |
|
|
CA368056563 rs1381927860 |
777 | F>L | No |
ClinGen gnomAD |
|
|
CA368056541 rs1369989041 |
779 | K>E | No |
ClinGen TOPMed |
|
|
CA162114927 rs889231869 |
780 | A>T | No |
ClinGen Ensembl |
|
|
CA368056505 RCV001029453 rs1584859927 |
781 | G>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368056422 rs1220754414 |
785 | T>S | No |
ClinGen TOPMed |
|
|
CA368056393 rs200903110 COSM602539 |
787 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC gnomAD |
|
CA368056361 rs1373964332 COSM197664 |
789 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA162114914 RCV001029455 rs199779996 |
789 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
CA4328064 rs201661522 |
791 | M>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4328065 rs756188258 |
791 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA368056303 rs1216670269 COSM1092609 |
792 | V>I | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs201249149 CA4328062 |
794 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001029457 CA4328061 rs201249149 |
794 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs201418528 CA4328059 |
795 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368056251 rs766867299 |
795 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs766867299 CA4328060 |
795 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs751041906 CA4328058 |
797 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328036 rs201142514 |
800 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA162113301 rs41305517 |
800 | D>N | No |
ClinGen Ensembl |
|
| TCGA novel | 801 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162113296 VAR_055428 rs2235039 |
801 | V>M | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs199856295 CA162113295 |
809 | N>S | No |
ClinGen Ensembl |
|
|
CA162113290 rs764059820 |
812 | G>R | No |
ClinGen TOPMed |
|
|
CA4328035 rs201744003 |
813 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA162113286 rs201744003 |
813 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200754866 CA4328032 |
819 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200754866 CA4328031 COSM1452580 |
819 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA368055781 rs1334428451 |
821 | D>G | No |
ClinGen TOPMed |
|
| TCGA novel | 821 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368055761 rs1289543302 |
823 | A>T | No |
ClinGen TOPMed |
|
|
rs1455293604 CA368055698 |
827 | G>E | No |
ClinGen gnomAD |
|
|
VAR_055429 CA162111000 rs2032581 |
829 | I>V | No |
ClinGen UniProt dbSNP gnomAD |
|
|
CA368055296 rs767089531 |
830 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368055298 rs1199081702 |
830 | G>S | No |
ClinGen TOPMed |
|
|
CA4328014 rs767089531 |
830 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368055263 rs1280076381 |
833 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 833 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1280076381 CA368055265 |
833 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA162110967 rs200496828 |
836 | I>N | No |
ClinGen Ensembl |
|
|
CA4328011 rs28381967 VAR_022279 |
836 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4328010 rs762765487 |
837 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA4328009 rs773262840 |
839 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs773262840 CA368055155 |
839 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA368055145 rs1584853278 |
840 | I>V | No |
ClinGen Ensembl |
|
|
CA368055130 COSM1550441 rs1416566507 |
841 | A>E | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
| TCGA novel | 842 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 843 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773175021 CA162110959 |
846 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368055075 rs1191107366 |
846 | G>R | No |
ClinGen TOPMed |
|
|
CA368055060 rs1432480917 |
847 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 848 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs36105130 CA162110939 |
849 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1158620384 CA368054997 |
851 | F>Y | No |
ClinGen gnomAD |
|
|
rs747022752 CA368054970 |
852 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4328006 rs371274259 |
853 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 853 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162110919 rs557586335 |
853 | Y>N | No |
ClinGen 1000Genomes |
|
|
TCGA novel rs746152564 CA4328004 |
855 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC gnomAD |
|
CA162110914 rs201741691 |
860 | L>F | No |
ClinGen Ensembl |
|
|
rs1000911090 CA162110912 |
861 | L>P | No |
ClinGen TOPMed |
|
|
CA368054828 rs1295312177 |
862 | L>S | No |
ClinGen TOPMed |
|
|
rs749745819 CA4328001 |
864 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA4328002 rs539556127 |
864 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4328000 rs778283893 |
866 | P>S | No |
ClinGen ExAC |
|
|
rs1380560733 CA368054760 |
867 | I>M | No |
ClinGen TOPMed |
|
|
rs1584853152 RCV001028644 CA368054695 |
873 | V>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs565619660 CA4327999 |
874 | V>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
RCV001028645 rs1584853146 CA368054686 |
874 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368054646 rs1584853136 RCV001028646 |
876 | M>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368054600 rs1356091019 |
878 | M>L | No |
ClinGen gnomAD |
|
|
rs1325417202 CA368054504 |
882 | Q>E | No |
ClinGen gnomAD |
|
|
rs147823195 CA4327995 |
883 | A>S | No |
ClinGen ESP ExAC gnomAD |
|
|
RCV001028647 CA4327996 rs147823195 |
883 | A>T | No |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
|
CA4327993 rs375296280 |
884 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 885 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001028648 rs1292455657 CA368054417 |
886 | D>N | No |
ClinGen ClinVar TOPMed dbSNP |
|
| VAR_035737 | 887 | K>N | a colorectal cancer sample; somatic mutation [UniProt] | No | UniProt |
|
rs772319458 CA4327990 |
894 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1456434795 CA368054194 |
895 | K>T | No |
ClinGen Ensembl |
|
| rs532094830 | 896 | I>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs532094830 CA4327973 |
896 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1219195402 CA368050341 |
896 | I>N | No |
ClinGen gnomAD |
|
|
CA4327972 rs147487745 |
897 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4327971 rs767693167 |
898 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138472105 CA162103148 |
900 | A>T | No |
ClinGen 1000Genomes gnomAD |
|
|
CA368050311 rs1441208915 |
901 | I>M | No |
ClinGen gnomAD |
|
|
rs1305120399 CA368050312 |
901 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 902 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1563032433 CA368050298 |
903 | N>S | No |
ClinGen Ensembl |
|
|
rs1244089186 CA368050290 |
904 | F>S | No |
ClinGen TOPMed |
|
|
CA4327970 rs759603974 |
905 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs774299788 CA4327969 |
905 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs573245329 CA368050268 |
907 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs573245329 CA4327968 |
907 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1349553183 CA368050259 |
908 | V>I | No |
ClinGen Ensembl |
|
|
rs773542500 CA4327966 |
913 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4327965 rs770181793 |
915 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1234949048 CA368050143 COSM1243951 |
915 | K>T | oesophagus Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4327964 rs748646739 |
918 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs201740660 CA4327963 |
919 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201740660 CA4327962 |
919 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368050003 rs377518806 |
923 | S>I | No |
ClinGen ESP gnomAD |
|
|
CA162103125 rs377518806 |
923 | S>N | No |
ClinGen ESP gnomAD |
|
|
CA368050000 rs1481562306 |
923 | S>R | No |
ClinGen gnomAD |
|
|
rs746491990 CA4327961 |
925 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA4327960 rs201316099 |
926 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368049954 rs201316099 |
926 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327957 rs148718120 |
928 | Y>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA162103114 rs947331479 |
929 | R>G | No |
ClinGen Ensembl |
|
| TCGA novel | 929 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368049712 rs1233953132 |
930 | N>H | No |
ClinGen gnomAD |
|
|
rs1584840650 RCV001029474 CA368049687 |
931 | S>P | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4327935 rs749050513 |
932 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA368049633 rs1290803512 |
934 | K>R | No |
ClinGen gnomAD |
|
|
CA4327933 rs200811596 |
937 | I>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368049553 rs1157098297 |
939 | G>R | No |
ClinGen gnomAD |
|
|
rs1455566610 CA368049511 |
941 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1489594324 CA368049469 |
944 | F>S | No |
ClinGen TOPMed |
|
|
CA4327931 rs766473800 |
945 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
RCV001029475 CA368049439 rs1584840613 |
946 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs750510915 CA4327929 |
947 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327928 rs765372820 |
948 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1253848627 CA368049409 |
948 | M>V | No |
ClinGen gnomAD |
|
|
rs1486026524 CA368049372 |
950 | Y>C | No |
ClinGen gnomAD |
|
|
CA368049343 rs1259613365 |
952 | S>T | No |
ClinGen gnomAD |
|
|
rs764408569 CA4327925 |
953 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs371370057 CA4327926 |
953 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 954 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162102780 rs201357626 |
956 | C>Y | No |
ClinGen gnomAD |
|
|
COSM2156767 rs144369247 CA4327921 |
958 | R>Q | Variant assessed as Somatic; 0.0001386 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs200280095 COSM2154823 CA4327922 |
958 | R>W | Variant assessed as Somatic; 0.0001387 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4327920 rs759050765 |
963 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA368049157 rs1395355925 |
963 | L>S | No |
ClinGen gnomAD |
|
|
rs1457360738 CA368049136 |
964 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA162102770 rs202110704 COSM353550 |
966 | H>N | lung [Cosmic] | No |
ClinGen cosmic curated Ensembl |
| TCGA novel | 966 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV001029476 rs770657790 CA4327918 |
972 | E>K | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs149638669 CA162102763 |
973 | D>A | No |
ClinGen ESP gnomAD |
|
|
CA4327917 rs748995428 |
973 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs748995428 CA368048922 |
973 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4327916 rs777591929 |
974 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 977 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4327896 rs781068922 |
978 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs572038993 CA4327895 |
980 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746992715 CA4327894 |
983 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA368047482 rs1441051651 |
983 | F>S | No |
ClinGen TOPMed |
|
|
CA368047412 rs1306027704 RCV001029481 |
985 | A>D | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1306027704 CA368047408 |
985 | A>G | No |
ClinGen gnomAD |
|
|
CA4327893 rs778961519 |
986 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1269015981 CA368047379 |
986 | M>T | No |
ClinGen TOPMed |
|
|
VAR_018352 rs926081975 CA162101962 |
986 | M>V | No |
ClinGen UniProt Ensembl dbSNP |
|
| TCGA novel | 987 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1359447217 CA368047330 |
987 | A>V | No |
ClinGen TOPMed |
|
|
rs921640760 CA162101951 |
988 | V>G | No |
ClinGen Ensembl |
|
|
rs753967146 CA4327891 |
988 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374210543 CA4327890 |
989 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs56849127 CA368047228 |
992 | S>I | No |
ClinGen gnomAD |
|
|
CA162101944 rs56849127 |
992 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 993 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 993 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756391728 CA4327889 |
998 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA368047118 rs72552784 |
999 | A>S | No |
ClinGen TOPMed |
|
|
CA162101938 VAR_015004 COSM1673260 rs72552784 |
999 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated UniProt TOPMed dbSNP |
|
CA4327888 rs752955240 |
1001 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1213524837 CA368047069 |
1001 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368046896 rs1279830740 |
1007 | H>R | No |
ClinGen gnomAD |
|
|
CA162101932 rs199882044 |
1009 | I>T | No |
ClinGen Ensembl |
|
|
rs201974955 CA4327885 |
1010 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368046800 rs1239674801 |
1011 | I>F | No |
ClinGen gnomAD |
|
|
rs765970394 CA4327884 |
1013 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1584836849 CA368046660 |
1015 | T>A | No |
ClinGen Ensembl |
|
|
rs145774816 CA4327883 |
1015 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1015 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1016 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1355889810 CA368046625 |
1016 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA368046513 rs1327938429 |
1019 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs772778438 CA4327882 |
1019 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA368046441 rs1386411918 |
1022 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1158715642 CA368046422 |
1022 | S>R | No |
ClinGen gnomAD |
|
|
rs1386411918 CA368046439 |
1022 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1162482512 CA368046416 |
1023 | T>A | No |
ClinGen TOPMed |
|
|
rs142183184 CA4327880 |
1023 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs768507751 CA368046319 |
1025 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs768507751 CA4327878 |
1025 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1317094548 CA368046328 |
1025 | G>S | No |
ClinGen TOPMed |
|
|
rs1584836737 CA368046246 RCV001029482 |
1027 | M>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs199819428 CA4327876 |
1027 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553790901 CA4327877 |
1027 | M>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA162101913 rs199819428 |
1027 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs2235044 | 1028 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs371977867 CA4327875 |
1028 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA368046215 rs1432511771 |
1028 | P>S | No |
ClinGen TOPMed |
|
|
CA4327857 rs771856280 |
1029 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162101623 rs201542635 |
1030 | T>A | No |
ClinGen TOPMed |
|
|
CA4327856 rs745866303 |
1031 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs769980649 CA4327854 |
1032 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1034 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs896954671 CA368044798 COSM1195596 |
1036 | T>I | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs896954671 CA162101613 |
1036 | T>K | No |
ClinGen gnomAD |
|
|
CA4327852 rs781503569 |
1037 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA162101605 rs200256019 |
1038 | G>D | No |
ClinGen Ensembl |
|
|
CA4327851 rs201819590 |
1040 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA4327850 rs200968469 |
1041 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1042 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1563029319 CA368044580 COSM4162485 |
1043 | N>K | thyroid [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA4327849 rs780583874 |
1044 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs957765239 CA162101599 |
1045 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs957765239 CA368044536 |
1045 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA368044487 rs1439277801 |
1046 | T>I | No |
ClinGen gnomAD |
|
|
CA4327848 rs758803493 |
1046 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA4327847 rs751009298 |
1047 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756736504 CA4327845 RCV001028664 COSM375251 |
1048 | P>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA4327846 rs778275248 |
1048 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1049 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760344941 CA4327842 |
1050 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760344941 CA4327843 |
1050 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327841 VAR_022280 rs28401798 |
1051 | P>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1370593595 CA368044330 |
1052 | V>A | No |
ClinGen gnomAD |
|
|
CA368044277 rs1409934524 |
1053 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 1054 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774405049 CA4327838 |
1055 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199891187 CA4327839 |
1055 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327837 rs770785509 |
1057 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1447617813 CA368044121 |
1058 | L>V | No |
ClinGen TOPMed |
|
|
rs1377559224 CA368044098 |
1059 | E>* | No |
ClinGen gnomAD |
|
|
CA368044072 RCV001028665 rs1584834930 |
1060 | V>M | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1235695290 CA368044040 |
1061 | K>N | No |
ClinGen TOPMed |
|
|
rs1369130405 CA368044047 COSM1243948 |
1061 | K>R | oesophagus [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA368044009 rs1432613672 |
1062 | K>N | No |
ClinGen gnomAD |
|
|
CA368044016 rs1584834899 RCV001028666 |
1062 | K>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA162101572 rs2707944 |
1063 | G>A | No |
ClinGen Ensembl |
|
|
CA4327836 rs761914266 RCV001028667 |
1063 | G>C | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
| TCGA novel | 1064 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776877163 CA4327835 COSM1243953 |
1065 | T>M | Variant assessed as Somatic; 0.0 impact. oesophagus urinary_tract breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA162101565 rs867333461 |
1066 | L>P | No |
ClinGen Ensembl |
|
|
CA162101563 rs780279896 |
1067 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201951511 CA4327833 |
1067 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4327832 rs780279896 |
1067 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772547356 CA4327831 |
1068 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1584834839 CA368043847 |
1069 | V>G | No |
ClinGen Ensembl |
|
|
rs1433103757 CA368043786 |
1072 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA162101558 rs201184403 |
1072 | S>R | No |
ClinGen Ensembl |
|
|
rs1198742227 CA368043768 |
1073 | G>A | No |
ClinGen TOPMed |
|
|
rs746235474 CA4327830 |
1074 | C>W | No |
ClinGen ExAC gnomAD |
|
|
rs1025622951 CA162101556 |
1074 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1584834796 RCV001028671 CA368043728 |
1075 | G>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA162101550 rs201870318 |
1076 | K>E | No |
ClinGen Ensembl |
|
|
CA368043692 rs1431158619 |
1077 | S>N | No |
ClinGen TOPMed |
|
|
rs200192869 CA368043674 |
1078 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200192869 CA4327829 |
1078 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200192869 CA162101546 |
1078 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1584834746 CA368043639 |
1079 | V>G | No |
ClinGen Ensembl |
|
|
CA368043651 rs1377795423 RCV001028672 |
1079 | V>M | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA368043618 rs1288076350 |
1080 | V>A | No |
ClinGen gnomAD |
|
|
CA368043617 rs1288076350 |
1080 | V>G | No |
ClinGen gnomAD |
|
|
CA368043626 rs1475311087 |
1080 | V>I | No |
ClinGen TOPMed |
|
|
CA162101538 rs201642705 |
1081 | Q>R | No |
ClinGen Ensembl |
|
|
CA4327825 rs755734139 |
1083 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA4327826 rs200514028 |
1083 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368043551 rs1403103790 |
1084 | E>Q | No |
ClinGen TOPMed |
|
|
rs201765972 CA4327822 |
1085 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs199943026 COSM69485 CA4327823 |
1085 | R>W | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA368043511 rs1584834667 |
1086 | F>V | No |
ClinGen Ensembl |
|
|
CA4327820 rs57521326 |
1088 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1090 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368043380 rs1412681422 |
1091 | A>G | No |
ClinGen gnomAD |
|
|
CA4327818 rs776827328 RCV001028673 |
1093 | K>E | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA368043332 rs1584834623 RCV001028674 |
1094 | V>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4327817 rs768927661 |
1094 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA368040659 rs1563026580 |
1096 | L>F | No |
ClinGen Ensembl |
|
|
RCV001029496 rs1584829753 |
1097 | D>missing | No |
ClinVar dbSNP |
|
|
CA162099945 rs41309225 |
1099 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA4327797 rs41309225 |
1099 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA368040336 rs1470273650 |
1103 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368040333 rs1266372866 |
1103 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4327794 rs148897157 |
1106 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774748307 CA4327793 |
1107 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327792 rs55852620 RCV000903000 VAR_015005 RCV001029497 |
1107 | Q>P | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1334153891 CA368040204 |
1108 | W>* | No |
ClinGen TOPMed |
|
|
CA4327791 rs35730308 |
1108 | W>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs773651038 CA4327790 |
1109 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1014207158 CA162099933 |
1110 | R>* | No |
ClinGen TOPMed |
|
|
rs770289924 CA4327789 |
1110 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA368040113 rs1293871816 |
1111 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 1112 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1584829663 CA368040062 |
1112 | H>P | No |
ClinGen Ensembl |
|
| TCGA novel | 1114 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368039960 rs1328523726 |
1114 | G>D | No |
ClinGen TOPMed |
|
|
CA4327788 rs747650743 |
1114 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA162099927 rs199931681 |
1115 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1347910274 CA368039947 |
1115 | I>V | No |
ClinGen gnomAD |
|
|
rs1389010033 CA368039930 |
1116 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
COSM227035 CA368039818 RCV001029500 rs1584829602 |
1119 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
rs746677023 CA4327785 |
1120 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA162099921 rs1017877229 |
1121 | I>M | No |
ClinGen TOPMed |
|
|
CA162099923 rs202215242 |
1121 | I>N | No |
ClinGen Ensembl |
|
|
rs779984514 CA4327784 |
1122 | L>V | No |
ClinGen ExAC gnomAD |
|
|
RCV001029501 rs1253462004 CA368039697 |
1124 | D>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA368039685 rs1253462004 |
1124 | D>Y | No |
ClinGen gnomAD |
|
|
CA4327783 rs758212180 |
1125 | C>G | No |
ClinGen ExAC gnomAD |
|
|
RCV001029502 rs758212180 CA368039656 |
1125 | C>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1584829568 CA368039606 RCV001029503 |
1126 | S>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA162099917 rs199894992 |
1127 | I>V | No |
ClinGen gnomAD |
|
|
CA4327782 rs763091787 |
1129 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327781 rs765229328 |
1130 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA368039416 rs765229328 |
1130 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1000260563 CA162099913 |
1132 | A>V | No |
ClinGen Ensembl |
|
|
rs1314060722 CA368039302 |
1133 | Y>C | No |
ClinGen gnomAD |
|
|
rs767536622 CA4327778 |
1134 | G>* | No |
ClinGen ExAC gnomAD |
|
|
CA368039285 rs767536622 |
1134 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs774493186 CA4327776 |
1135 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA4327775 rs766599262 |
1136 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs41309228 CA162099905 |
1137 | S>I | No |
ClinGen Ensembl |
|
|
rs200196668 CA4327772 |
1138 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4327773 rs773597757 |
1138 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1140 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs2229107 VAR_022281 CA4327770 |
1141 | S>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs768115578 CA4327769 |
1144 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1045642 RCV000602614 |
1145 | I>= | No |
ClinVar dbSNP |
|
|
CA368038865 rs1045642 |
1145 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs779788253 CA368038858 |
1146 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327767 rs779788253 |
1146 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368038818 rs1482837611 |
1147 | R>K | No |
ClinGen gnomAD |
|
|
rs1272689553 CA368038808 |
1148 | A>T | No |
ClinGen gnomAD |
|
|
CA162099893 rs199605609 |
1149 | A>V | No |
ClinGen Ensembl |
|
|
rs201520086 CA4327766 |
1152 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs201520086 CA368038694 |
1152 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs368427451 CA162099889 |
1154 | I>M | No |
ClinGen Ensembl |
|
|
rs1313948400 CA368038608 |
1155 | H>R | No |
ClinGen TOPMed |
|
|
CA4327764 rs778901580 |
1156 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA4327765 rs745613481 |
1156 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA4327763 rs200703943 |
1158 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1410153460 CA368038486 |
1159 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs781320202 CA4327761 |
1159 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4327759 rs751662492 |
1162 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA368038399 rs766547835 |
1163 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs59241388 CA4327741 |
1168 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs780152885 CA4327740 |
1169 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1473237773 CA368037737 |
1173 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368037703 RCV001028682 COSM747743 rs1584826485 |
1175 | Q>* | lung [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
rs1466258029 CA368037663 |
1177 | S>C | No |
ClinGen gnomAD |
|
| TCGA novel | 1177 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368037665 rs1466258029 |
1177 | S>Y | No |
ClinGen gnomAD |
|
|
CA368037641 rs1415144759 |
1179 | G>C | No |
ClinGen TOPMed |
|
| TCGA novel | 1179 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA575858997 rs1295088187 |
1180 | Q>R | No |
ClinGen gnomAD |
|
|
CA368037597 rs1584826433 RCV001028683 |
1181 | K>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1584826422 CA368037586 RCV001028684 |
1181 | K>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1421351917 RCV001028685 CA368037578 |
1182 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4327735 rs754264039 |
1183 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs199676098 CA4327736 |
1183 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1281843123 CA368037549 |
1184 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
RCV001028687 rs764463583 CA4327734 |
1185 | A>D | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA368037521 rs1400860335 |
1186 | I>V | No |
ClinGen TOPMed |
|
|
CA368037493 rs139820108 |
1188 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed |
|
CA162099158 rs139820108 |
1188 | R>G | No |
ClinGen ESP TOPMed |
|
|
CA4327733 rs201530445 |
1188 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM2156810 rs1378191421 CA368037474 |
1189 | A>V | Variant assessed as Somatic; impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA368037466 RCV001028688 rs1584826349 |
1191 | V>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 1193 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759250541 CA4327730 |
1193 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1285942204 CA368037432 |
1194 | P>T | No |
ClinGen TOPMed |
|
|
CA162099153 rs769925505 |
1195 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1366730591 CA368037397 |
1196 | I>V | No |
ClinGen gnomAD |
|
|
CA368037324 COSM1698849 RCV001028689 rs1584826310 |
1201 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
CA4327728 rs770620028 |
1203 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770620028 CA368037294 |
1203 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202030954 CA162099148 |
1205 | A>T | No |
ClinGen gnomAD |
|
|
CA368037252 rs1490083456 |
1206 | L>R | No |
ClinGen Ensembl |
|
| TCGA novel | 1208 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769592199 CA4327725 |
1209 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs769592199 CA368037214 |
1209 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368037191 rs1390471469 |
1210 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1390471469 CA368037192 |
1210 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA4327724 rs201111035 |
1211 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1451623254 CA368037121 CA368037126 |
1212 | K>N | No |
ClinGen gnomAD |
|
|
CA162099145 rs1029583513 |
1212 | K>T | No |
ClinGen TOPMed |
|
| TCGA novel | 1213 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368035745 rs1584824159 RCV001029506 |
1214 | V>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1584824153 CA368035738 RCV001029507 |
1215 | Q>K | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA162098773 rs140995435 |
1216 | E>K | No |
ClinGen gnomAD |
|
|
COSM1673258 rs1584824131 RCV001029508 CA368035700 |
1217 | A>T | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
rs768613690 CA4327705 |
1221 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs1188387982 CA368035617 |
1222 | R>G | No |
ClinGen gnomAD |
|
|
CA368035613 rs1344972013 |
1222 | R>T | No |
ClinGen gnomAD |
|
| TCGA novel | 1223 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA162098764 rs41309231 |
1223 | E>D | No |
ClinGen TOPMed |
|
| TCGA novel | 1223 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1281746264 COSM238635 CA368035566 |
1225 | R>C | prostate [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs779103120 CA4327702 COSM1452575 |
1225 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1338160384 CA368035560 |
1226 | T>A | No |
ClinGen TOPMed |
|
|
RCV001029509 rs1584824060 CA368035541 |
1227 | C>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1408243208 CA368035491 |
1228 | I>N | No |
ClinGen gnomAD |
|
|
rs199912437 CA162098758 |
1228 | I>V | No |
ClinGen Ensembl |
|
|
CA4327700 rs757394498 RCV001029510 |
1230 | I>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
RCV001029511 CA368035441 rs1584824009 |
1231 | A>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA368035406 rs1584824001 |
1232 | H>P | No |
ClinGen Ensembl |
|
|
CA4327698 rs563375387 |
1233 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4327696 rs201578293 COSM3032623 |
1233 | R>H | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4327697 rs201578293 |
1233 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200637194 CA162098747 |
1236 | T>I | No |
ClinGen gnomAD |
|
|
CA368035341 rs1584823965 |
1237 | I>T | No |
ClinGen Ensembl |
|
|
CA4327695 rs139750664 |
1237 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs755563103 CA162098744 |
1238 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4327692 rs201089646 |
1240 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs762504646 CA4327691 |
1241 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA162098740 rs142093374 |
1241 | D>N | No |
ClinGen ESP |
|
|
rs1210266411 CA368035261 |
1242 | L>F | No |
ClinGen gnomAD |
|
|
rs1441356731 CA368035242 |
1243 | I>R | No |
ClinGen gnomAD |
|
|
rs772971590 CA4327690 |
1244 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368035087 rs1230774968 |
1248 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA162098737 rs201609930 RCV001029512 |
1249 | G>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1470598507 CA368035083 |
1249 | G>S | No |
ClinGen TOPMed |
|
|
rs1373455786 CA368035046 |
1250 | R>I | No |
ClinGen gnomAD |
|
|
RCV001029513 rs1373455786 CA368035047 |
1250 | R>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
VAR_018353 COSM197657 RCV000959670 CA4327687 rs28364274 |
1251 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA368034983 rs1444127505 |
1252 | K>E | No |
ClinGen gnomAD |
|
|
CA4327686 rs768562415 |
1252 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368034928 rs1584823866 RCV001029514 |
1253 | E>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1303671591 CA368034932 |
1253 | E>Q | No |
ClinGen gnomAD |
|
|
CA368034913 rs1447340915 |
1254 | H>N | No |
ClinGen gnomAD |
|
|
CA368034881 rs1404008939 |
1254 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1013586488 CA162098731 |
1255 | G>D | No |
ClinGen TOPMed |
|
|
rs35721439 CA4327685 |
1256 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs35721439 CA368034832 |
1256 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1257 | H>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1044890354 CA162098727 |
1257 | H>P | No |
ClinGen gnomAD |
|
|
CA368034806 rs1044890354 |
1257 | H>R | No |
ClinGen gnomAD |
|
|
CA4327683 rs771100707 |
1257 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1263 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1038514609 COSM1698848 CA162098725 |
1265 | G>S | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA368034566 rs1283093586 COSM1181285 |
1266 | I>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
RCV001029517 rs1457191518 CA368034548 |
1267 | Y>* | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1415447553 COSM1673257 CA368034550 |
1267 | Y>C | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA368034552 RCV001029515 rs1584823811 |
1267 | Y>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1415447553 CA368034551 RCV001029516 |
1267 | Y>S | No |
ClinGen ClinVar dbSNP gnomAD |
|
| TCGA novel | 1269 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1269 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200264629 CA162098723 |
1270 | M>T | No |
ClinGen Ensembl |
|
|
rs1584823781 CA368034440 |
1274 | Q>K | No |
ClinGen Ensembl |
|
|
CA162098721 rs867908714 |
1274 | Q>L | No |
ClinGen Ensembl |
|
|
rs1321813708 CA368034418 |
1275 | A>S | No |
ClinGen TOPMed |
|
|
rs777987186 CA4327681 |
1277 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1277 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs137996914 CA4327680 |
1279 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4327678 rs200263370 |
1279 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200263370 CA4327679 |
1279 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1214032998 CA368034268 |
1280 | Q>H | No |
ClinGen gnomAD |
|
|
CA4327677 rs202194143 |
1280 | Q>P | No |
ClinGen 1000Genomes ExAC gnomAD |
1 associated diseases with P08183
[MIM: 612244]: Inflammatory bowel disease 13 (IBD13)
A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
Without disease ID
- A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
8 regional properties for P08183
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ABC transporter-like, ATP-binding domain | 392 - 628 | IPR003439-1 |
| domain | ABC transporter-like, ATP-binding domain | 1035 - 1273 | IPR003439-2 |
| domain | AAA+ ATPase domain | 419 - 611 | IPR003593-1 |
| domain | AAA+ ATPase domain | 1062 - 1250 | IPR003593-2 |
| domain | ABC transporter type 1, transmembrane domain | 52 - 357 | IPR011527-1 |
| domain | ABC transporter type 1, transmembrane domain | 712 - 1000 | IPR011527-2 |
| conserved_site | ABC transporter-like, conserved site | 531 - 545 | IPR017871-1 |
| conserved_site | ABC transporter-like, conserved site | 1176 - 1190 | IPR017871-2 |
Functions
| Description | ||
|---|---|---|
| EC Number | 7.6.2.1 | Linked to the hydrolysis of a nucleoside triphosphate |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| apical plasma membrane | The region of the plasma membrane located at the apical end of the cell. |
| cell surface | The external part of the cell wall and/or plasma membrane. |
| external side of apical plasma membrane | The leaflet the apical region of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
12 GO annotations of molecular function
| Name | Definition |
|---|---|
| ABC-type xenobiotic transporter activity | Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out). |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATPase-coupled transmembrane transporter activity | Primary active transporter of a solute across a membrane, via the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of a substance across a membrane. The transport protein may be transiently phosphorylated (P-type transporters), or not (ABC-type transporters and other families of transporters). Primary active transport occurs up the solute's concentration gradient and is driven by a primary energy source. |
| carboxylic acid transmembrane transporter activity | Enables the transfer of carboxylic acids from one side of a membrane to the other. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-). |
| ceramide floppase activity | Catalysis of the movement of ceramide from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| efflux transmembrane transporter activity | Enables the transfer of a specific substance or related group of substances from the inside of the cell to the outside of the cell across a membrane. |
| floppase activity | Catalysis of the movement of a lipid from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| phosphatidylcholine floppase activity | Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| phosphatidylethanolamine flippase activity | Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. |
| transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
| ubiquitin protein ligase binding | Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins. |
| xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
17 GO annotations of biological process
| Name | Definition |
|---|---|
| carboxylic acid transmembrane transport | The process in which carboxylic acid is transported across a membrane. |
| ceramide translocation | The movement of a ceramide molecule from one leaflet of a membrane bilayer to the opposite leaflet. |
| export across plasma membrane | The directed movement of some substance from inside of a cell, across the plasma membrane and into the extracellular region. |
| G2/M transition of mitotic cell cycle | The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex. |
| phospholipid translocation | The movement of a phospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet. |
| positive regulation of anion channel activity | Any process that activates or increases the frequency, rate or extent of anion channel activity. |
| regulation of chloride transport | Any process that modulates the frequency, rate or extent of chloride transport. |
| regulation of response to osmotic stress | Any process that modulates the rate or extent of the response to osmotic stress. |
| response to xenobiotic stimulus | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
| stem cell proliferation | The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. |
| terpenoid transport | The directed movement of terpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Terpenoids are a class of compounds characterized by an isoprenoid chemical structure and include derivatives with various functional groups. |
| transepithelial transport | The directed movement of a substance from one side of an epithelium to the other. |
| transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
| transport across blood-brain barrier | The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-brain barrier. |
| xenobiotic detoxification by transmembrane export across the plasma membrane | A process that reduces or removes the toxicity of a xenobiotic by exporting it outside the cell. |
| xenobiotic metabolic process | The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to the organim exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical. |
| xenobiotic transport across blood-brain barrier | The directed movement of a xenobiotic through the blood-brain barrier. |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9NP58 | ABCB6 | ATP-binding cassette sub-family B member 6 | Homo sapiens (Human) | PR |
| O95342 | ABCB11 | Bile salt export pump | Homo sapiens (Human) | PR |
| P21440 | Abcb4 | Phosphatidylcholine translocator ABCB4 | Mus musculus (Mouse) | PR |
| Q9QY30 | Abcb11 | Bile salt export pump | Mus musculus (Mouse) | PR |
| P06795 | Abcb1b | ATP-dependent translocase ABCB1 | Mus musculus (Mouse) | PR |
| P21447 | Abcb1a | ATP-dependent translocase ABCB1 | Mus musculus (Mouse) | PR |
| O70127 | Abcb11 | Bile salt export pump | Rattus norvegicus (Rat) | PR |
| Q8H1R4 | ABCI10 | ABC transporter I family member 10 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9ZR72 | ABCB1 | ABC transporter B family member 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LJX0 | ABCB19 | ABC transporter B family member 19 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDLEGDRNGG | AKKKNFFKLN | NKSEKDKKEK | KPTVSVFSMF | RYSNWLDKLY | MVVGTLAAII |
| 70 | 80 | 90 | 100 | 110 | 120 |
| HGAGLPLMML | VFGEMTDIFA | NAGNLEDLMS | NITNRSDIND | TGFFMNLEED | MTRYAYYYSG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IGAGVLVAAY | IQVSFWCLAA | GRQIHKIRKQ | FFHAIMRQEI | GWFDVHDVGE | LNTRLTDDVS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KINEGIGDKI | GMFFQSMATF | FTGFIVGFTR | GWKLTLVILA | ISPVLGLSAA | VWAKILSSFT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DKELLAYAKA | GAVAEEVLAA | IRTVIAFGGQ | KKELERYNKN | LEEAKRIGIK | KAITANISIG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AAFLLIYASY | ALAFWYGTTL | VLSGEYSIGQ | VLTVFFSVLI | GAFSVGQASP | SIEAFANARG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AAYEIFKIID | NKPSIDSYSK | SGHKPDNIKG | NLEFRNVHFS | YPSRKEVKIL | KGLNLKVQSG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QTVALVGNSG | CGKSTTVQLM | QRLYDPTEGM | VSVDGQDIRT | INVRFLREII | GVVSQEPVLF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ATTIAENIRY | GRENVTMDEI | EKAVKEANAY | DFIMKLPHKF | DTLVGERGAQ | LSGGQKQRIA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| IARALVRNPK | ILLLDEATSA | LDTESEAVVQ | VALDKARKGR | TTIVIAHRLS | TVRNADVIAG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| FDDGVIVEKG | NHDELMKEKG | IYFKLVTMQT | AGNEVELENA | ADESKSEIDA | LEMSSNDSRS |
| 670 | 680 | 690 | 700 | 710 | 720 |
| SLIRKRSTRR | SVRGSQAQDR | KLSTKEALDE | SIPPVSFWRI | MKLNLTEWPY | FVVGVFCAII |
| 730 | 740 | 750 | 760 | 770 | 780 |
| NGGLQPAFAI | IFSKIIGVFT | RIDDPETKRQ | NSNLFSLLFL | ALGIISFITF | FLQGFTFGKA |
| 790 | 800 | 810 | 820 | 830 | 840 |
| GEILTKRLRY | MVFRSMLRQD | VSWFDDPKNT | TGALTTRLAN | DAAQVKGAIG | SRLAVITQNI |
| 850 | 860 | 870 | 880 | 890 | 900 |
| ANLGTGIIIS | FIYGWQLTLL | LLAIVPIIAI | AGVVEMKMLS | GQALKDKKEL | EGSGKIATEA |
| 910 | 920 | 930 | 940 | 950 | 960 |
| IENFRTVVSL | TQEQKFEHMY | AQSLQVPYRN | SLRKAHIFGI | TFSFTQAMMY | FSYAGCFRFG |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| AYLVAHKLMS | FEDVLLVFSA | VVFGAMAVGQ | VSSFAPDYAK | AKISAAHIIM | IIEKTPLIDS |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| YSTEGLMPNT | LEGNVTFGEV | VFNYPTRPDI | PVLQGLSLEV | KKGQTLALVG | SSGCGKSTVV |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| QLLERFYDPL | AGKVLLDGKE | IKRLNVQWLR | AHLGIVSQEP | ILFDCSIAEN | IAYGDNSRVV |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| SQEEIVRAAK | EANIHAFIES | LPNKYSTKVG | DKGTQLSGGQ | KQRIAIARAL | VRQPHILLLD |
| 1210 | 1220 | 1230 | 1240 | 1250 | 1260 |
| EATSALDTES | EKVVQEALDK | AREGRTCIVI | AHRLSTIQNA | DLIVVFQNGR | VKEHGTHQQL |
| 1270 | |||||
| LAQKGIYFSM | VSVQAGTKRQ |