O48773
Gene name |
PDIL2-3 (PDI9, PDIL5-2, At2g32920, T21L14.14) |
Protein name |
Protein disulfide-isomerase 2-3 |
Names |
AtPDIL2-3, Protein disulfide-isomerase 5-2, AtPDIL5-2, Protein disulfide-isomerase 9, PDI9 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G32920 |
EC number |
5.3.4.1: Transposing S-S bonds |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O48773
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O48773-F1 | Predicted | AlphaFoldDB |
28 variants for O48773
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH13512079 | 13 | T>I | No | 1000Genomes | |
| ENSVATH01941831 | 27 | G>E | No | 1000Genomes | |
| tmp_2_13965310_C_T | 33 | V>I | No | 1000Genomes | |
| ENSVATH05646871 | 49 | G>A | No | 1000Genomes | |
| tmp_2_13965070_C_T | 51 | V>I | No | 1000Genomes | |
| tmp_2_13965015_G_T | 69 | T>K | No | 1000Genomes | |
| tmp_2_13964176_C_G | 137 | G>A | No | 1000Genomes | |
| tmp_2_13964157_C_A | 143 | L>F | No | 1000Genomes | |
| ENSVATH01941827 | 149 | P>S | No | 1000Genomes | |
| tmp_2_13964135_C_T | 151 | G>R | No | 1000Genomes | |
| tmp_2_13964111_A_G | 159 | S>P | No | 1000Genomes | |
| tmp_2_13964107_T_C | 160 | E>G | No | 1000Genomes | |
| ENSVATH05646857 | 168 | N>K | No | 1000Genomes | |
| tmp_2_13963562_G_A | 225 | S>L | No | 1000Genomes | |
| tmp_2_13963512_C_T | 242 | G>S | No | 1000Genomes | |
| tmp_2_13963460_G_C | 259 | A>G | No | 1000Genomes | |
| ENSVATH13512062 | 269 | E>D | No | 1000Genomes | |
| ENSVATH05646850 | 278 | T>I | No | 1000Genomes | |
| tmp_2_13963265_C_A | 291 | G>V | No | 1000Genomes | |
| ENSVATH00257731 | 309 | A>V | No | 1000Genomes | |
| ENSVATH01941821 | 337 | A>G | No | 1000Genomes | |
| tmp_2_13962885_C_T | 343 | D>N | No | 1000Genomes | |
| tmp_2_13962806_G_T | 369 | A>D | No | 1000Genomes | |
| ENSVATH14579742 | 379 | H>N | No | 1000Genomes | |
| ENSVATH01941820 | 401 | P>L | No | 1000Genomes | |
| ENSVATH05646840 | 406 | T>S | No | 1000Genomes | |
| ENSVATH09395797 | 433 | A>T | No | 1000Genomes | |
| tmp_2_13962518_G_A | 436 | S>F | No | 1000Genomes |
No associated diseases with O48773
6 regional properties for O48773
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Protein disulfide-isomerase, thioredoxin-like domain | 35 - 134 | IPR005788-1 |
| domain | Protein disulfide-isomerase, thioredoxin-like domain | 167 - 266 | IPR005788-2 |
| domain | Thioredoxin domain | 24 - 136 | IPR013766-1 |
| domain | Thioredoxin domain | 154 - 269 | IPR013766-2 |
| conserved_site | Thioredoxin, conserved site | 52 - 70 | IPR017937-1 |
| conserved_site | Thioredoxin, conserved site | 184 - 202 | IPR017937-2 |
Functions
| Description | ||
|---|---|---|
| EC Number | 5.3.4.1 | Transposing S-S bonds |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum lumen | The volume enclosed by the membranes of the endoplasmic reticulum. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| protein disulfide isomerase activity | Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins. |
| protein-disulfide reductase activity | Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| response to endoplasmic reticulum stress | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stress acting at the endoplasmic reticulum. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen. |
12 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q12404 | MPD1 | Protein disulfide-isomerase MPD1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q2KIL5 | PDIA5 | Protein disulfide-isomerase A5 | Bos taurus (Bovine) | PR |
| Q8N807 | PDILT | Protein disulfide-isomerase-like protein of the testis | Homo sapiens (Human) | PR |
| Q15084 | PDIA6 | Protein disulfide-isomerase A6 | Homo sapiens (Human) | PR |
| Q921X9 | Pdia5 | Protein disulfide-isomerase A5 | Mus musculus (Mouse) | PR |
| Q922R8 | Pdia6 | Protein disulfide-isomerase A6 | Mus musculus (Mouse) | PR |
| Q5I0H9 | Pdia5 | Protein disulfide-isomerase A5 | Rattus norvegicus (Rat) | PR |
| Q63081 | Pdia6 | Protein disulfide-isomerase A6 | Rattus norvegicus (Rat) | PR |
| Q10N04 | PDIL5-1 | Protein disulfide isomerase-like 5-1 | Oryza sativa subsp japonica (Rice) | PR |
| Q67UF5 | PDIL2-3 | Protein disulfide isomerase-like 2-3 | Oryza sativa subsp japonica (Rice) | PR |
| Q8GYD1 | PDIL5-1 | Protein disulfide-isomerase 5-1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9MAU6 | PDIL2-2 | Protein disulfide-isomerase like 2-2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MYKSPLTLLT | LLTICFGFFD | LSSALYGSSS | PVVQLTASNF | KSKVLNSNGV | VLVEFFAPWC |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GHCKALTPTW | EKVANILKGV | ATVAAIDADA | HQSAAQDYGI | KGFPTIKVFV | PGKAPIDYQG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ARDAKSIANF | AYKQIKGLLS | DRLEGKSKPT | GGGSKEKKSE | PSASVELNAS | NFDDLVIESN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| ELWIVEFFAP | WCGHCKKLAP | EWKRAAKNLQ | GKVKLGHVNC | DVEQSIMSRF | KVQGFPTILV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| FGPDKSSPYP | YEGARSASAI | ESFASELVES | SAGPVEVTEL | TGPDVMEKKC | GSAAICFISF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LPDILDSKAE | GRNKYLEMLL | SVAEKFKKQP | YSFMWVAAVT | QMDLEKRVNV | GGYGYPAMVA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| MNVKKGVYAP | LKSAFELQHL | LEFVKDAGTG | GKGNVPMNGT | PEIVKTKEWD | GKDGELIEED |
| 430 | |||||
| EFSLDELMGG | DDAVGSKDEL |