Q9Y3T9
Gene name |
NOC2L (NIR) |
Protein name |
Nucleolar complex protein 2 homolog |
Names |
Protein NOC2 homolog, NOC2-like protein, Novel INHAT repressor |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:26155 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for Q9Y3T9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 8FKV | EM | 247 A | NA | 1-749 | PDB |
| 8FKW | EM | 250 A | NA | 1-749 | PDB |
| 8FKX | EM | 259 A | NA | 1-749 | PDB |
| 8FKY | EM | 267 A | NA | 1-749 | PDB |
| AF-Q9Y3T9-F1 | Predicted | AlphaFoldDB |
888 variants for Q9Y3T9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs1424179005 | 1 | M>? | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337860209 rs1451578655 |
2 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs777464521 CA504884 |
3 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751323008 CA504886 |
3 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA504885 rs751323008 |
3 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs777464521 CA337860163 |
3 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504883 rs758258147 |
4 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140357200 CA504881 |
4 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504880 rs766646410 |
5 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337860089 rs1332194627 |
5 | G>R | No |
ClinGen TOPMed |
|
|
rs199568295 CA16751210 |
6 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA504878 rs199568295 |
6 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs147719505 CA504877 |
7 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147719505 CA337859990 |
7 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762248835 CA337859987 |
7 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504876 rs762248835 |
7 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337859991 rs147719505 |
7 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504874 rs768867769 |
8 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA504836 rs140070898 |
12 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs551203562 CA16750937 |
13 | E>K | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA337859534 rs776138989 |
15 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504835 rs776138989 |
15 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337859508 rs1569961742 |
16 | V>G | No |
ClinGen Ensembl |
|
|
rs1365774663 CA337859483 |
17 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1198406858 CA337859490 |
17 | D>N | No |
ClinGen TOPMed |
|
|
CA504831 rs772794670 |
19 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA337859439 rs1569961711 |
19 | F>V | No |
ClinGen Ensembl |
|
|
CA337859376 rs1196463457 |
21 | A>P | No |
ClinGen TOPMed |
|
|
CA504828 rs774308660 |
21 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504827 rs768412867 |
23 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749164589 CA504825 |
24 | F>L | No |
ClinGen ExAC |
|
|
rs749164589 CA504826 |
24 | F>V | No |
ClinGen ExAC |
|
|
rs757503620 CA337859235 |
25 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs781265425 CA504823 |
25 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs529239702 CA16750852 |
26 | S>A | No |
ClinGen Ensembl |
|
|
CA504821 rs747001647 |
26 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs910730866 CA16750810 |
27 | E>* | No |
ClinGen TOPMed |
|
|
CA504819 rs778032813 |
27 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA16750797 rs985001701 |
28 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA337859148 rs1444970492 |
28 | S>P | No |
ClinGen TOPMed |
|
|
CA504817 rs748591290 |
30 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA504815 rs755297883 |
32 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1408964970 CA337859059 |
32 | S>P | No |
ClinGen gnomAD |
|
|
CA16750785 rs993540056 |
33 | E>K | No |
ClinGen TOPMed |
|
|
rs200036735 CA504813 |
36 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504811 rs375481825 |
37 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504810 rs375481825 |
37 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504809 rs766979552 |
37 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1180546729 CA337858928 |
38 | A>E | No |
ClinGen gnomAD |
|
|
rs761357057 CA337858935 |
38 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA504808 rs761357057 |
38 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs768646282 CA504806 |
40 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA504804 rs775367747 |
41 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA504805 rs775367747 |
41 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA504803 rs771020504 |
43 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA337858837 rs1216544911 |
44 | R>C | No |
ClinGen gnomAD |
|
|
rs1216544911 CA337858838 |
44 | R>G | No |
ClinGen gnomAD |
|
|
rs747224291 CA504802 |
44 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337858830 rs1227644216 |
45 | E>K | No |
ClinGen gnomAD |
|
|
CA504798 rs779499305 |
47 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA337858757 rs1223809416 |
48 | R>Q | No |
ClinGen TOPMed |
|
|
rs755524938 CA504797 |
49 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504796 rs754105178 |
50 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1445086522 CA337858713 |
51 | D>H | No |
ClinGen TOPMed |
|
|
rs1445086522 CA337858715 |
51 | D>N | No |
ClinGen TOPMed |
|
|
CA504795 rs144217019 |
53 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1376607530 CA337858678 |
53 | P>S | No |
ClinGen TOPMed |
|
|
rs373754985 CA337858620 |
56 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337858618 rs1216043448 |
57 | P>S | No |
ClinGen Ensembl |
|
|
rs201512962 CA504790 |
58 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774139591 CA504694 |
61 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs762293011 CA504695 |
61 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373824797 CA16748044 |
62 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373824797 CA504693 |
62 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504692 rs185378741 |
62 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA504691 rs199899191 |
63 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1487546903 CA337856939 |
64 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1487546903 CA337856937 |
64 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA504690 rs769731077 |
65 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1216437327 CA337856923 |
65 | R>H | No |
ClinGen gnomAD |
|
|
CA16748043 rs1052153818 |
66 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA337856868 rs1569956343 |
67 | S>A | No |
ClinGen Ensembl |
|
|
CA504688 rs376536035 |
69 | H>R | No |
ClinGen ESP ExAC TOPMed |
|
|
CA337856660 rs1323902833 |
72 | Q>* | No |
ClinGen gnomAD |
|
|
rs751376082 CA337856645 |
72 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs912729102 CA16747994 |
72 | Q>R | No |
ClinGen TOPMed |
|
|
CA504683 rs755215778 |
75 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200571394 CA504684 |
75 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA337856580 rs1288906665 |
76 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA504682 rs753878460 |
77 | K>M | No |
ClinGen ExAC |
|
|
rs1235395053 CA337856528 |
78 | D>E | No |
ClinGen TOPMed |
|
|
rs1391446125 CA337856526 |
79 | R>G | No |
ClinGen gnomAD |
|
|
CA337856515 rs1319029019 |
79 | R>S | No |
ClinGen gnomAD |
|
|
rs1360039397 CA337856464 |
81 | P>S | No |
ClinGen gnomAD |
|
|
rs768133755 CA504678 |
82 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773930857 CA16747976 |
82 | E>K | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 82 | E>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1557623434 CA337856317 |
85 | K>E | No |
ClinGen Ensembl |
|
|
rs762014153 CA504677 |
85 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA504675 rs375122790 |
88 | Q>R | No |
ClinGen ESP ExAC gnomAD |
|
| rs1557623418 | 89 | E>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337856158 rs1353079758 |
89 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA337856144 rs1557623416 |
90 | N>D | No |
ClinGen Ensembl |
|
|
rs370677078 CA504673 |
90 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337856097 rs1412588303 |
91 | D>G | No |
ClinGen TOPMed |
|
|
rs1257495008 CA337856115 |
91 | D>N | No |
ClinGen gnomAD |
|
|
CA337856068 rs1207629773 |
92 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA504672 rs574490179 |
92 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs377340835 CA504671 |
93 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1001970046 CA16747866 |
95 | L>Q | No |
ClinGen TOPMed |
|
|
rs780315678 CA504666 CA504664 |
96 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs756140824 CA337855893 |
97 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504662 rs767851994 |
97 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504663 rs756140824 |
97 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764520136 CA504658 |
99 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA504659 rs779208980 |
99 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs372783720 COSM3419544 CA504657 |
100 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA504655 rs764948090 |
101 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1258062840 CA337855724 |
102 | S>G | No |
ClinGen gnomAD |
|
|
rs1179882781 CA337855650 |
103 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1179882781 CA337855648 |
103 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs369245053 CA504654 |
105 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1206772374 CA337855552 |
106 | E>* | No |
ClinGen gnomAD |
|
|
CA337855556 rs1206772374 |
106 | E>K | No |
ClinGen gnomAD |
|
|
rs1349015128 CA337855531 |
107 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA337855527 rs140114557 |
107 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504653 rs776228680 |
107 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA504651 rs746921496 |
108 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs773184606 CA504650 |
109 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780069377 CA504647 |
111 | H>L | No |
ClinGen ExAC |
|
|
rs780069377 CA504646 |
111 | H>P | No |
ClinGen ExAC |
|
|
rs756369231 CA337855441 |
111 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504645 rs780069377 |
111 | H>R | No |
ClinGen ExAC |
|
|
rs1569956003 CA337855431 |
112 | S>F | No |
ClinGen Ensembl |
|
|
rs745884272 CA504642 |
115 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 115 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337855392 rs1193054205 |
115 | D>Y | No |
ClinGen TOPMed |
|
|
rs1557623292 CA337855366 |
116 | V>M | No |
ClinGen Ensembl |
|
|
CA337855355 rs1264878729 |
117 | L>P | No |
ClinGen TOPMed |
|
|
CA504618 rs758997399 |
119 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs752965906 CA504617 |
120 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs779306808 CA504616 |
120 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA16747649 rs369515916 |
123 | E>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA504613 rs766016750 |
123 | E>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 124 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs149856680 CA504611 |
124 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504610 rs767390045 |
125 | D>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 126 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs182282381 CA504609 |
127 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs150615968 CA504608 |
127 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1387564328 CA337855103 |
128 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1387564328 CA337855101 |
128 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1376464410 CA337855108 |
128 | E>K | No |
ClinGen TOPMed |
|
|
rs1478783784 CA337855046 |
130 | G>E | No |
ClinGen gnomAD |
|
|
rs762712585 CA504606 |
130 | G>R | No |
ClinGen ExAC |
|
| TCGA novel | 130 | G>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1402022540 CA337855024 |
132 | D>N | No |
ClinGen gnomAD |
|
|
CA504603 rs747037050 |
133 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504604 rs771282830 |
133 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778032749 CA504602 |
134 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA16747627 rs1010817559 |
136 | V>I | No |
ClinGen TOPMed |
|
|
CA16747597 rs1030649446 |
138 | R>G | No |
ClinGen TOPMed |
|
|
CA504597 rs749621887 |
139 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337854911 rs199618485 |
139 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs199618485 CA504598 |
139 | G>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA337854881 rs1569955526 |
141 | K>N | No |
ClinGen Ensembl |
|
|
CA504596 rs779619644 |
142 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1369012494 CA337854873 |
142 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
COSM1296759 rs749893385 COSM912880 CA504594 |
144 | K>N | Variant assessed as Somatic; 0.0 impact. endometrium urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA337854844 rs1261231363 |
144 | K>T | No |
ClinGen TOPMed |
|
|
CA337854820 rs1365922929 |
145 | N>I | No |
ClinGen gnomAD |
|
|
CA337854813 rs1422140072 |
145 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs766979537 CA504593 |
146 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766979537 CA337854794 |
146 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1199336114 CA337854791 |
146 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA337854787 rs1432751870 |
147 | V>L | No |
ClinGen gnomAD |
|
|
CA337854762 rs376538715 |
148 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1334530413 CA337854761 |
148 | P>L | No |
ClinGen gnomAD |
|
|
CA504592 rs376538715 |
148 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 148 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA504591 rs751498845 |
149 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs1171558420 CA337854727 |
150 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1399599086 CA337854736 |
150 | T>P | No |
ClinGen gnomAD |
|
|
rs1391413076 CA337854709 COSM912879 |
151 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1391413076 CA337854707 |
151 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA504586 rs760950940 |
152 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769695147 COSM167968 CA504588 |
152 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA504587 rs760950940 |
152 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773618840 CA504585 |
153 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1198467277 CA337854595 |
155 | E>K | No |
ClinGen gnomAD |
|
|
rs1276763199 CA337854568 |
156 | R>G | No |
ClinGen gnomAD |
|
|
rs748246429 CA504582 |
156 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA504583 rs748246429 |
156 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA504581 rs144525853 |
157 | W>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs769060324 CA504580 |
158 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA337854468 rs1262089462 |
158 | K>R | No |
ClinGen TOPMed |
|
|
rs749613398 CA504579 |
159 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs540105040 CA504578 |
160 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA504576 rs745495237 |
161 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756719063 CA504575 |
162 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200815419 CA504539 |
164 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504538 rs138672231 |
164 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504537 rs771368142 |
165 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA337852541 rs1452564675 |
167 | P>A | No |
ClinGen gnomAD |
|
|
rs539291822 CA504536 |
167 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA337852522 rs539291822 |
167 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA504535 rs777542528 |
169 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1053823369 CA16746891 |
169 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs935400228 CA16746884 |
170 | F>L | No |
ClinGen TOPMed |
|
|
rs747668797 CA504533 |
171 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763630029 CA504534 |
171 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs778940343 CA504532 |
172 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs754991971 CA504531 |
172 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA504530 rs753643247 |
174 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 174 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1359441783 CA337852287 |
176 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs751716091 CA504527 |
177 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370709441 CA504526 |
178 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337852229 rs370709441 |
178 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504525 rs545096972 |
178 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA337852195 rs1178405593 |
179 | A>G | No |
ClinGen gnomAD |
|
|
CA16746835 rs933110327 |
179 | A>T | No |
ClinGen TOPMed |
|
| TCGA novel | 179 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337852181 rs1301129240 |
180 | A>S | No |
ClinGen TOPMed |
|
|
CA337852179 rs1301129240 |
180 | A>T | No |
ClinGen TOPMed |
|
|
rs146963528 CA504522 |
182 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1169166328 CA337852082 |
183 | T>A | No |
ClinGen gnomAD |
|
|
CA504521 rs777245235 |
185 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771187906 CA504520 |
185 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM912870 rs1207519077 CA337851994 |
187 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA337851947 rs1346560196 |
188 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 188 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771867705 CA504517 |
188 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504515 rs774033430 |
189 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA504516 rs376126859 |
189 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504514 rs768317412 |
190 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs151303352 CA504513 |
192 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504510 CA337851683 rs745678368 |
194 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs559329243 CA504511 |
194 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA337851587 rs1374958469 |
196 | F>L | No |
ClinGen gnomAD |
|
|
rs1169278760 CA337851543 |
198 | V>F | No |
ClinGen gnomAD |
|
|
CA504509 rs777799560 |
199 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337851396 rs1207962348 |
201 | S>N | No |
ClinGen TOPMed |
|
|
rs113620763 RCV000911044 CA504472 |
203 | A>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 204 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337851159 rs1198925677 |
204 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
CA504470 rs746809344 |
205 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA504469 rs779047181 |
205 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139726958 CA504467 |
206 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504465 rs756202165 |
207 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs536809464 CA337851083 |
207 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA337851019 rs1234047290 |
210 | F>S | No |
ClinGen gnomAD |
|
|
CA16746446 rs928942731 |
211 | C>R | No |
ClinGen TOPMed |
|
|
CA504461 rs763791889 |
212 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA504462 rs757631707 |
212 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1241411611 CA337850906 |
213 | R>K | No |
ClinGen TOPMed |
|
|
rs762699507 CA337850894 |
214 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA504458 rs752332265 |
214 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs762699507 CA504459 |
214 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA504456 rs147225789 |
215 | L>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147225789 CA16746384 |
215 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1467146921 CA337850835 |
216 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs776484250 CA504455 |
216 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770866559 CA504454 |
218 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs372730403 CA504453 |
219 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372730403 CA337850752 |
219 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504451 rs771799161 |
220 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749499986 CA504450 |
224 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs780202164 CA337850584 CA504449 |
225 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504448 rs769916934 |
227 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337850459 rs1342757548 |
228 | A>T | No |
ClinGen gnomAD |
|
|
rs765188247 CA504447 |
228 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1334429023 CA337850356 |
230 | D>G | No |
ClinGen gnomAD |
|
|
CA504445 rs201024260 |
230 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201024260 CA504444 |
230 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1557622349 CA337850332 |
231 | S>C | No |
ClinGen Ensembl |
|
|
rs148852075 CA504442 |
231 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1311726004 CA337850301 |
232 | S>N | No |
ClinGen gnomAD |
|
|
CA504378 rs199728424 |
236 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA504377 rs150111944 |
237 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1366578048 CA337848064 |
238 | S>F | No |
ClinGen TOPMed |
|
|
rs1430233388 CA337848056 |
239 | S>G | No |
ClinGen gnomAD |
|
|
CA337848045 rs1187136671 |
239 | S>N | No |
ClinGen TOPMed |
|
|
CA504375 rs200266888 |
240 | S>N | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs761974319 CA504373 |
241 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756842651 CA504374 |
241 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA337847991 rs1214234134 |
242 | L>I | No |
ClinGen TOPMed |
|
|
rs1417077674 CA337847929 |
243 | W>C | No |
ClinGen gnomAD |
|
|
CA337847955 rs758208263 |
243 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504371 rs758208263 |
243 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504370 rs752562459 |
243 | W>S | No |
ClinGen ExAC gnomAD |
|
|
rs766666244 CA504369 |
244 | G>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 245 | K>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA504366 rs767479478 |
246 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1557621316 CA337847850 |
246 | L>R | No |
ClinGen Ensembl |
|
|
CA504365 rs762015490 |
247 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs3828050 CA504362 |
247 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs3828050 COSM536434 CA504364 |
247 | R>L | lung Variant assessed as Somatic; 4.649e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs3828050 CA504363 |
247 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770185904 CA504360 |
250 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504359 rs745488135 |
250 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA504357 rs770343875 |
251 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368213271 CA504356 |
252 | A>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA337847620 rs758439566 |
253 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs62639963 CA504355 |
253 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504352 rs778825903 |
254 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337847618 rs778825903 |
254 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337847578 rs1407360840 |
255 | G>D | No |
ClinGen TOPMed |
|
|
CA16743691 rs865808492 |
256 | S>W | No |
ClinGen Ensembl |
|
|
CA504349 rs767781493 |
257 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA504347 rs200405190 |
258 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1419573255 CA337847485 |
258 | I>V | No |
ClinGen gnomAD |
|
|
CA337847421 rs1474605288 |
259 | Q>* | No |
ClinGen gnomAD |
|
|
CA16743680 rs927491400 |
259 | Q>H | No |
ClinGen TOPMed |
|
|
rs960193855 CA16743682 |
259 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA337847194 rs1455067137 |
260 | L>P | No |
ClinGen gnomAD |
|
|
rs758406424 CA504310 |
261 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs778039218 CA504311 |
261 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1302963125 CA337847059 |
264 | L>P | No |
ClinGen TOPMed |
|
|
CA504309 rs764097872 |
265 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs937791247 CA16743430 |
267 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs755479013 CA504305 |
268 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349952457 CA337846861 |
270 | L>F | No |
ClinGen gnomAD |
|
|
CA504303 rs3828049 |
271 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_028145 CA504302 rs3828049 |
271 | A>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1569949273 CA337846778 |
273 | V>G | No |
ClinGen Ensembl |
|
|
rs200446475 CA504299 |
273 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs554175821 CA504297 |
275 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA504298 rs370030288 |
275 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337846690 rs1397433978 |
276 | H>R | No |
ClinGen gnomAD |
|
|
CA337846637 rs1477917063 |
277 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA504294 rs769575058 |
278 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA337846631 rs1195647887 |
278 | S>N | No |
ClinGen gnomAD |
|
|
rs113267738 CA504293 |
278 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337846598 CA16743346 rs772311539 |
279 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772311539 CA504291 |
279 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs377070129 CA504286 |
282 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA16743305 rs990823165 |
283 | C>R | No |
ClinGen Ensembl |
|
|
CA337846464 rs1271683140 |
283 | C>Y | No |
ClinGen gnomAD |
|
|
CA504285 rs756485369 |
284 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337846420 rs1224860793 |
284 | F>S | No |
ClinGen gnomAD |
|
|
rs767241580 CA337846261 |
288 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA504283 rs767241580 |
288 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs898339210 CA16743282 |
289 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
rs761528263 CA504282 |
290 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA337846213 rs761528263 |
290 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA504281 rs751223299 |
290 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763649870 CA504280 |
292 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504279 rs143094540 |
292 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337845987 rs1557621046 |
295 | L>V | No |
ClinGen Ensembl |
|
|
CA16742632 rs766790772 |
297 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs3748597 CA337844471 |
300 | I>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1569948099 CA337844465 |
300 | I>S | No |
ClinGen Ensembl |
|
|
VAR_028146 rs3748597 CA504249 |
300 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs140662264 CA504248 |
301 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337844398 rs1216007315 |
302 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA337844329 rs1448258929 |
304 | T>I | No |
ClinGen gnomAD |
|
|
rs1281487965 CA337844288 |
305 | G>V | No |
ClinGen gnomAD |
|
|
rs3748596 CA16742596 CA337844251 |
306 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 306 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 307 | E>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1365869788 CA337844133 |
310 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs142878344 CA504244 |
310 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA337844100 rs1293190542 |
311 | V>L | No |
ClinGen gnomAD |
|
|
CA504243 rs758018670 |
312 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA16742590 rs929061806 |
313 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs550278624 CA504240 |
316 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1175376582 CA337843885 |
316 | V>I | No |
ClinGen gnomAD |
|
|
rs530399169 CA504238 |
318 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs530399169 CA504237 |
318 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA504235 rs767382979 |
321 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs546165013 CA504233 |
322 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs367591999 CA504234 |
322 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA16742544 rs971183053 |
323 | H>N | No |
ClinGen gnomAD |
|
|
CA337843532 rs769994240 |
323 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504231 rs759693707 |
323 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs769994240 CA504232 |
323 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs971183053 CA337843534 |
323 | H>Y | No |
ClinGen gnomAD |
|
|
CA337843513 rs1364341873 |
324 | K>E | No |
ClinGen gnomAD |
|
|
CA337843482 rs1276469650 |
324 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA337843392 rs1346036922 |
325 | K>R | No |
ClinGen TOPMed |
|
|
CA504227 rs747360955 |
327 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1296391858 CA337843199 |
327 | T>I | No |
ClinGen TOPMed |
|
|
rs747360955 CA504228 |
327 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337843213 rs1296391858 |
327 | T>S | No |
ClinGen TOPMed |
|
|
rs1557620598 CA337843198 |
328 | F>V | No |
ClinGen Ensembl |
|
|
rs577506851 CA504226 |
329 | L>F | Variant assessed as Somatic; 9.243e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs778540310 CA337842984 |
331 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778540310 CA504223 |
331 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504224 rs747793945 |
331 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150127608 CA504221 |
332 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337842946 rs1482552706 |
333 | L>V | No |
ClinGen gnomAD |
|
|
rs769055122 CA504185 |
336 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA504186 rs774663902 |
336 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748928754 CA504184 |
337 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs769123373 CA504182 |
338 | I>L | No |
ClinGen ExAC |
|
|
rs199569261 CA504181 |
339 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337842185 rs1421471683 |
341 | V>M | No |
ClinGen TOPMed |
|
|
rs963122047 CA16742116 |
342 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA337842160 rs963122047 |
342 | R>M | No |
ClinGen TOPMed gnomAD |
|
|
rs368410720 CA504179 |
344 | C>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA16742112 rs368410720 |
344 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746984140 CA504178 |
345 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1425714425 CA337841950 |
347 | T>I | No |
ClinGen gnomAD |
|
|
CA337842002 rs1569946799 |
347 | T>P | No |
ClinGen Ensembl |
|
|
rs753940524 CA504175 |
348 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs942679767 CA16742089 |
348 | S>P | No |
ClinGen TOPMed |
|
|
CA337841918 rs1372852540 |
349 | P>L | No |
ClinGen gnomAD |
|
|
CA504173 rs756098125 |
349 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337841916 rs1298785837 |
350 | G>S | No |
ClinGen gnomAD |
|
|
CA16742058 rs201273917 |
354 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337841798 rs1385115689 |
354 | F>V | No |
ClinGen gnomAD |
|
| TCGA novel | 355 | I>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA504169 rs774894562 |
355 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA337841775 rs774894562 |
355 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1359193867 CA337841664 |
358 | M>T | No |
ClinGen gnomAD |
|
|
CA504168 rs764439845 |
360 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274175520 CA337841550 |
361 | T>I | No |
ClinGen TOPMed |
|
|
rs774951068 CA504166 |
362 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs745330712 CA504165 |
363 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504164 rs745330712 |
363 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745330712 CA337841522 |
363 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746936976 CA504161 |
367 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA337841380 rs1254005494 |
368 | L>R | No |
ClinGen gnomAD |
|
|
rs758209867 CA504159 |
368 | L>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 369 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780094847 CA504157 |
370 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs200380211 CA504156 |
370 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs780094847 CA16742039 |
370 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 371 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337841302 rs1339226415 |
371 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs757397609 CA337841277 |
373 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA504152 rs757397609 |
373 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1227263549 CA337841216 |
374 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1234920371 CA337841219 |
374 | Y>F | No |
ClinGen TOPMed |
|
|
rs1234920371 CA337841224 |
374 | Y>S | No |
ClinGen TOPMed |
|
|
CA337841215 rs1341579275 |
375 | Q>* | No |
ClinGen gnomAD |
|
|
rs751999586 CA337841165 |
375 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1373867804 CA337841159 |
376 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
CA337841119 rs1310500245 |
377 | A>G | No |
ClinGen TOPMed |
|
|
CA337841130 rs372047419 |
377 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372047419 CA504150 |
377 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs765160791 CA16742009 |
379 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs765160791 CA337841069 |
379 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs536170990 CA504146 |
382 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA337840983 COSM912868 rs958395128 |
382 | R>H | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA16741999 rs958395128 |
382 | R>L | No |
ClinGen TOPMed |
|
|
rs893874000 CA337840907 |
385 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs893874000 CA16741988 |
385 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1259618519 CA337840871 |
386 | I>T | No |
ClinGen gnomAD |
|
|
CA16741982 rs999933754 |
388 | L>P | No |
ClinGen Ensembl |
|
|
CA504143 rs770496250 |
389 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA504142 rs760274356 |
389 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1449490062 CA337840792 |
390 | N>D | No |
ClinGen gnomAD |
|
|
CA504139 rs142181102 |
391 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504138 rs142181102 |
391 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337840674 rs1332700559 |
392 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1395828326 CA337840610 |
393 | T>I | No |
ClinGen gnomAD |
|
|
CA504137 rs143404316 |
394 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504134 rs746096765 |
395 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504132 rs141541533 |
395 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141541533 CA504133 |
395 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337840573 rs1442807386 |
396 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA504130 rs367716421 COSM912867 |
396 | K>N | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA504129 rs202064701 |
397 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 398 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337839535 rs1412069731 |
398 | E>K | No |
ClinGen TOPMed |
|
|
rs779299571 CA504108 |
399 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504106 rs769774180 |
400 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1348268193 CA337839439 |
402 | S>F | No |
ClinGen gnomAD |
|
|
rs754285530 CA504105 |
404 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs766890046 CA504104 |
405 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs373804753 CA504103 |
405 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504102 rs750154349 |
406 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1224600887 CA337839202 |
407 | Q>* | No |
ClinGen Ensembl |
|
| TCGA novel | 408 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA337839137 rs1364327096 |
409 | V>A | No |
ClinGen TOPMed |
|
|
CA504100 rs144707752 |
409 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504099 rs774290521 |
410 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA504098 rs763964319 |
411 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762701037 CA504097 |
412 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337838984 rs1215040239 |
413 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA337839010 rs1288814079 |
413 | F>V | No |
ClinGen gnomAD |
|
|
CA337838971 rs1557619783 |
414 | L>P | No |
ClinGen Ensembl |
|
|
CA337838875 rs1295180510 |
417 | R>Q | No |
ClinGen gnomAD |
|
|
CA337838880 rs1221216699 |
417 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA504093 rs534742600 |
420 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs144009138 CA504091 |
421 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM3401067 CA504089 rs755408287 |
422 | A>V | Variant assessed as Somatic; 9.244e-05 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1177963609 CA337838693 |
423 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs370113195 CA504088 |
423 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1177963609 CA337838698 |
423 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1177963609 CA337838695 |
423 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs202229466 CA504086 |
425 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs767091383 CA504084 |
426 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504082 rs377428606 |
427 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504080 rs567905943 |
428 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA504079 rs373812903 |
428 | L>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA337838546 rs373812903 |
428 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA337838499 rs1410915653 |
429 | Q>H | No |
ClinGen TOPMed |
|
|
rs150656195 CA504078 |
430 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504077 rs370840764 |
433 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337838421 rs1473540895 |
433 | Y>D | No |
ClinGen TOPMed |
|
|
CA337838404 rs370840764 |
433 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1278223609 CA337838392 |
434 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA337838377 rs1447065839 |
434 | P>L | No |
ClinGen TOPMed |
|
|
CA337838390 rs1278223609 |
434 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA337838365 rs925598717 COSM1686857 |
435 | L>F | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs925598717 CA16741569 |
435 | L>I | No |
ClinGen TOPMed |
|
|
CA504073 rs370000397 |
436 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA504072 rs748439522 |
436 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1399402693 CA337838322 |
437 | Q>* | No |
ClinGen gnomAD |
|
|
CA504071 rs774269105 |
439 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1557619698 CA337838214 |
440 | I>T | No |
ClinGen Ensembl |
|
|
rs768915351 CA504070 |
440 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1358324065 CA337838201 |
441 | G>D | No |
ClinGen gnomAD |
|
|
rs531109222 CA504069 |
441 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA337838197 rs1358324065 |
441 | G>V | No |
ClinGen gnomAD |
|
|
rs1171002567 CA337838163 |
443 | I>V | No |
ClinGen gnomAD |
|
|
CA337837888 rs1222105090 |
444 | K>N | No |
ClinGen TOPMed |
|
|
rs1466846452 CA337838123 |
444 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA504039 rs754845161 |
446 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA504040 rs778431780 |
446 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1291281918 CA337837834 |
447 | P>R | No |
ClinGen gnomAD |
|
|
rs753866757 CA504038 |
449 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs201490539 CA504037 |
450 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337837778 rs956890867 |
450 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA16740726 rs956890867 |
450 | R>L | No |
ClinGen gnomAD |
|
|
CA337837767 rs1421937657 |
451 | F>V | No |
ClinGen gnomAD |
|
|
rs1181426236 CA337837719 |
452 | Y>* | No |
ClinGen gnomAD |
|
|
CA16740721 rs925638066 |
452 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA337837731 rs925638066 |
452 | Y>S | No |
ClinGen TOPMed gnomAD |
|
|
CA337837715 rs1338679294 |
453 | P>A | No |
ClinGen TOPMed |
|
|
CA16740719 rs978486706 |
453 | P>L | No |
ClinGen TOPMed |
|
|
CA16740701 rs967128892 |
455 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA504036 rs760523219 COSM3419543 |
455 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs751673370 CA337837653 CA504035 |
456 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA16740686 rs768954686 |
458 | C>R | No |
ClinGen Ensembl |
|
|
rs1218662199 CA337837617 |
458 | C>Y | No |
ClinGen gnomAD |
|
|
CA504032 COSM1344689 rs112703241 |
460 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs112703241 CA337837582 |
460 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504031 rs775681821 |
460 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337837511 rs1298669641 |
461 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs563697611 COSM3948712 CA504030 |
463 | T>M | Variant assessed as Somatic; 0.000109 impact. ovary [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA16740639 rs996955024 |
464 | L>P | No |
ClinGen gnomAD |
|
|
CA504027 rs771137085 |
465 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs142398749 CA504026 |
466 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337837425 rs1263970598 |
467 | G>E | No |
ClinGen gnomAD |
|
|
rs867321702 CA16740616 |
467 | G>W | No |
ClinGen Ensembl |
|
|
CA504024 rs377053805 |
469 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs549858391 CA337837360 |
469 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs549858391 CA504023 |
469 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA504021 rs754582637 |
470 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA16740553 rs749112228 |
473 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA504019 rs780052414 |
473 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs749112228 CA504020 |
473 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA504018 rs755814934 |
474 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA504013 rs200646300 |
477 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA504014 rs373923416 |
477 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA16740523 rs747399226 |
479 | I>T | No |
ClinGen Ensembl |
|
|
CA16740527 rs1036856120 |
479 | I>V | No |
ClinGen TOPMed |
|
|
CA504011 rs776948053 |
480 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs761124597 CA504009 |
481 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA337834980 rs1356850848 |
482 | M>I | No |
ClinGen TOPMed |
|
|
rs1363656912 CA337834915 |
483 | F>L | No |
ClinGen gnomAD |
|
|
CA503986 rs773943074 |
484 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1442681020 CA337834895 |
484 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs912942005 CA16736669 |
485 | Q>* | No |
ClinGen gnomAD |
|
|
CA337834853 rs1413491659 |
485 | Q>R | No |
ClinGen TOPMed |
|
|
CA503983 rs775044682 |
487 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337834692 rs1449323431 |
490 | R>K | No |
ClinGen gnomAD |
|
|
rs912514080 CA16736639 |
492 | P>L | No |
ClinGen Ensembl |
|
|
CA337834601 rs1290259443 |
493 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA337834603 rs1290259443 |
493 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA503981 rs199834703 |
494 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA503980 rs559197331 |
494 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA16736624 CA503979 rs757156333 |
495 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA337834561 rs1288585592 |
495 | M>V | No |
ClinGen gnomAD |
|
|
rs1269718521 CA337834512 |
496 | S>N | No |
ClinGen gnomAD |
|
|
rs778965967 CA503977 |
497 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503976 rs755202760 |
499 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA503974 rs780173891 |
500 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503975 rs780173891 |
500 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200896050 CA503973 |
502 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750870295 CA503972 |
503 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs762123766 CA503970 |
504 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1479193970 CA337834238 |
505 | I>F | No |
ClinGen gnomAD |
|
|
CA503969 rs751920109 |
507 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337834131 rs1199404966 |
509 | S>C | No |
ClinGen gnomAD |
|
|
rs72631890 CA503968 |
510 | N>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1232224494 CA337834117 |
511 | V>G | No |
ClinGen TOPMed |
|
|
rs1290893907 CA337834121 |
511 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 512 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762655000 CA503967 |
512 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA337834050 rs1214110956 |
514 | Q>K | No |
ClinGen gnomAD |
|
|
CA503966 rs143278708 |
515 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs375064108 CA503965 COSM1217542 |
517 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA503960 rs777608108 |
519 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM293769 rs777608108 CA503961 |
519 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs771025619 CA503962 |
519 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503933 rs573900479 CA503932 |
520 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs903880140 CA16736212 |
520 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA337833673 rs1243531921 |
520 | D>N | No |
ClinGen gnomAD |
|
|
CA337833640 rs1370621146 |
521 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1448511950 CA337833648 |
521 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA337832775 rs1553161158 |
523 | V>G | No |
ClinGen Ensembl |
|
|
CA503930 rs200038390 |
523 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA503928 rs765918869 |
525 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA16736202 rs7416492 |
526 | L>V | No |
ClinGen Ensembl |
|
|
CA337832669 rs773149234 |
527 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503925 rs767385738 |
528 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337832658 rs1176706902 |
529 | L>F | No |
ClinGen gnomAD |
|
|
rs1271006113 CA337832622 |
530 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA337832607 rs1358534082 |
531 | L>P | No |
ClinGen gnomAD |
|
|
CA337832604 rs1286458444 |
532 | E>Q | No |
ClinGen gnomAD |
|
|
rs768498673 CA503922 |
533 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1241962203 CA337832563 |
533 | Y>C | No |
ClinGen gnomAD |
|
|
rs1386873373 CA337832544 |
534 | L>P | No |
ClinGen gnomAD |
|
|
rs770986187 CA16736179 |
535 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770986187 CA503919 |
535 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747085379 CA337832495 |
536 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs747085379 CA503918 COSM1344688 |
536 | S>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA503917 rs778307982 |
537 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337832483 rs778307982 |
537 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337832471 rs1362307243 |
538 | A>V | No |
ClinGen gnomAD |
|
|
rs1158609500 CA337832452 |
539 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs758803235 CA337832438 |
540 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503916 rs758803235 |
540 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503915 rs149625280 |
541 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA503913 rs143290081 |
542 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337832362 rs1484746753 |
544 | P>A | No |
ClinGen gnomAD |
|
|
rs139055451 CA503912 |
544 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 544 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA503910 rs755609968 |
545 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1280804398 CA337832310 |
546 | L>V | No |
ClinGen gnomAD |
|
|
CA503909 rs749869576 |
547 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337832299 rs749869576 |
547 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337832274 rs1327523202 |
548 | L>V | No |
ClinGen TOPMed |
|
|
rs985145826 CA16736120 |
549 | P>L | No |
ClinGen TOPMed |
|
|
CA337832192 rs1411006937 |
553 | Q>* | No |
ClinGen TOPMed |
|
|
CA503883 VAR_050289 rs35471880 |
556 | S>L | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs35471880 CA337831648 |
556 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs765132800 CA337831590 |
557 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA337831572 rs1336500101 |
558 | L>F | No |
ClinGen gnomAD |
|
|
CA503880 rs760797512 |
558 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA337831573 rs1336500101 |
558 | L>V | No |
ClinGen gnomAD |
|
|
CA503878 rs771983247 |
559 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503879 rs763357220 |
559 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA337831413 rs775671055 |
561 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
CA16734042 rs775671055 |
561 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs902223495 CA16734035 |
561 | C>Y | No |
ClinGen Ensembl |
|
|
CA503877 rs762004275 |
562 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA337831292 rs762004275 |
562 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 564 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA503875 rs200220074 |
564 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA16734029 rs901788033 |
565 | N>S | No |
ClinGen Ensembl |
|
|
rs1364246367 CA337831169 |
566 | Y>S | No |
ClinGen TOPMed gnomAD |
|
|
CA16734013 rs867685413 |
567 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs749857767 CA503874 |
567 | C>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 568 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA503872 rs372813385 |
568 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201757857 CA503873 |
568 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA337830965 rs745447109 |
570 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503871 rs745447109 |
570 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1345452090 CA337830964 |
571 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA16733988 rs943258910 |
575 | G>R | No |
ClinGen Ensembl |
|
|
rs1362110954 CA337830809 |
576 | K>R | No |
ClinGen gnomAD |
|
|
rs1569935079 CA337830786 |
577 | V>G | No |
ClinGen Ensembl |
|
|
rs756709696 CA503869 |
577 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA16733982 rs559880802 |
578 | Q>* | No |
ClinGen TOPMed |
|
|
CA16733985 rs559880802 |
578 | Q>E | No |
ClinGen TOPMed |
|
|
CA503868 rs751101679 |
579 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA337830657 rs1569935052 |
580 | N>T | No |
ClinGen Ensembl |
|
|
CA503865 rs752693019 |
581 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA16733949 rs752693019 |
581 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA337830599 rs1274727319 |
582 | A>P | No |
ClinGen Ensembl |
|
|
CA503863 rs754811608 |
582 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA503862 rs750557589 |
583 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA16733921 rs950896025 |
585 | C>Y | No |
ClinGen TOPMed |
|
|
rs112341375 CA503859 |
586 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1409744938 CA337830392 |
586 | S>T | No |
ClinGen gnomAD |
|
|
CA503858 rs764325657 |
587 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503857 rs143216532 |
587 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1003561399 CA16733876 |
588 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1170104394 CA337830301 |
589 | Q>H | No |
ClinGen TOPMed |
|
|
CA337830219 rs1286663935 |
591 | V>D | No |
ClinGen gnomAD |
|
|
CA337830210 rs1286663935 |
591 | V>G | No |
ClinGen gnomAD |
|
|
CA337830223 rs1371994390 |
591 | V>I | No |
ClinGen TOPMed |
|
|
CA16733840 rs746597529 |
593 | F>C | No |
ClinGen Ensembl |
|
|
rs1284000504 CA337830108 |
594 | G>S | No |
ClinGen gnomAD |
|
|
CA503850 rs777256112 |
595 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA337830044 rs1271708638 |
597 | E>K | No |
ClinGen TOPMed |
|
|
CA503849 rs757974433 |
598 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1430233272 CA337830001 |
599 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA337829998 rs1430233272 |
599 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs199697037 CA503847 |
601 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA503807 rs749182300 |
603 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA503808 rs568306861 |
603 | A>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs769664218 CA503805 |
605 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs139458619 CA503803 |
609 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA337829509 rs752922962 |
609 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503801 rs752922962 |
609 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503802 rs139458619 |
609 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779048301 CA503800 |
612 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337829392 rs1320859675 |
612 | G>R | No |
ClinGen TOPMed |
|
|
rs1197558281 CA337829300 |
614 | P>L | No |
ClinGen Ensembl |
|
|
CA16733501 rs1051334164 |
616 | T>A | No |
ClinGen TOPMed |
|
|
rs865966847 CA16733495 |
617 | L>F | No |
ClinGen Ensembl |
|
|
CA337829214 rs1248524078 |
618 | Y>N | No |
ClinGen TOPMed gnomAD |
|
|
CA503794 rs767827150 |
619 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
CA337828994 rs1299332695 |
622 | W>* | No |
ClinGen gnomAD |
|
|
CA503791 rs768154020 |
623 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3419542 CA503790 rs148962722 |
623 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs768154020 CA503792 |
623 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503787 rs767651790 |
626 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337828841 rs781123483 |
626 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781123483 CA503786 |
626 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs112072809 CA503785 |
627 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145695271 CA337828798 |
628 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA16733445 rs150197742 |
628 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs150197742 CA337828765 |
628 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs150197742 CA503782 |
628 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA503783 rs145695271 |
628 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs780153174 CA503780 |
629 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs939073673 CA16733429 |
631 | Q>L | No |
ClinGen TOPMed |
|
|
rs756597480 CA503779 |
632 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA337828389 rs1319186266 |
637 | K>R | No |
ClinGen gnomAD |
|
|
CA16733360 rs887735628 |
638 | E>Q | No |
ClinGen Ensembl |
|
|
rs147322750 CA337826784 |
639 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147322750 CA503774 |
639 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751175492 CA503775 |
639 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760522368 CA503727 |
646 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs368403481 CA16732143 |
647 | E>D | No |
ClinGen TOPMed |
|
|
rs750377234 CA503726 |
648 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1249158892 CA337825911 |
649 | K>E | No |
ClinGen gnomAD |
|
|
CA337825872 rs1414446365 |
649 | K>N | No |
ClinGen TOPMed |
|
|
CA503725 rs767240804 |
649 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA503724 rs369553946 |
650 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs775649472 CA337825835 |
650 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs775649472 COSM912865 CA503723 |
650 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1285777075 CA337825777 |
651 | R>S | No |
ClinGen gnomAD |
|
|
rs769972766 CA503722 |
652 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA337825682 rs879100690 CA16732093 |
653 | M>I | No |
ClinGen gnomAD |
|
| TCGA novel | 653 | M>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1379926673 CA337825704 |
653 | M>T | No |
ClinGen TOPMed |
|
|
rs759852708 CA503721 |
653 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA337825673 rs781377753 |
654 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781377753 CA503720 |
654 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337825659 rs1371314707 |
654 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1387431929 CA337825643 |
655 | D>G | No |
ClinGen gnomAD |
|
|
rs747410572 CA503718 |
655 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1470027310 CA337825615 |
656 | R>K | No |
ClinGen gnomAD |
|
|
rs1362577141 CA337825563 |
657 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA503715 rs540404478 |
660 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1473280812 CA337825501 |
660 | D>N | No |
ClinGen gnomAD |
|
|
rs779464694 CA503713 |
662 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs920336712 CA16732048 |
663 | Q>* | No |
ClinGen Ensembl |
|
|
CA503709 rs754659814 |
664 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337825176 rs1296314953 |
665 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA16732034 rs554710385 |
667 | L>F | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs779361120 CA503707 |
668 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337824977 rs113650656 |
670 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA503703 rs112163984 |
670 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA503705 rs113650656 |
670 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs751334404 CA503702 |
674 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 675 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 677 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA503698 rs187444884 |
677 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA503699 rs187444884 |
677 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA503700 rs187444884 |
677 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA337824664 rs1195668832 |
678 | T>I | No |
ClinGen gnomAD |
|
|
CA337824620 rs1248097837 |
679 | E>D | No |
ClinGen gnomAD |
|
|
CA337824654 rs1479219472 |
679 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs772663096 CA503694 |
679 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA503693 rs774793911 |
680 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA337824609 rs774793911 |
680 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA337824617 rs1356907049 |
680 | G>R | No |
ClinGen TOPMed |
|
|
CA503692 rs774793911 |
680 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs77999481 CA503688 |
682 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs748882157 CA503689 |
682 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA16731984 rs77999481 |
682 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA503686 rs200279266 |
683 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1221775005 CA337824467 |
683 | E>K | No |
ClinGen gnomAD |
|
|
CA337824439 rs1275651510 |
684 | R>T | No |
ClinGen gnomAD |
|
|
rs761333411 CA503653 |
686 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA337823292 rs1309451038 |
688 | R>K | No |
ClinGen gnomAD |
|
|
rs1430049796 CA337823231 |
688 | R>S | No |
ClinGen gnomAD |
|
|
CA503651 rs764622834 |
689 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs543983521 CA16731365 |
689 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA337823177 rs1251318023 |
691 | S>N | No |
ClinGen TOPMed |
|
|
CA16731348 rs916386848 |
691 | S>R | No |
ClinGen TOPMed |
|
|
CA503650 rs763392759 |
692 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs147931528 CA16731340 |
692 | T>I | No |
ClinGen ESP |
|
|
rs74047418 CA503648 |
693 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140901809 CA503649 |
693 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA503646 rs374726923 |
694 | H>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1263992467 CA337822991 |
695 | G>E | No |
ClinGen gnomAD |
|
|
rs770404445 CA503645 |
696 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA337822827 rs1222615301 |
699 | D>G | No |
ClinGen gnomAD |
|
|
rs371201923 CA503643 COSM414753 |
699 | D>N | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs748044298 CA503641 |
700 | E>D | No |
ClinGen ExAC TOPMed |
|
|
CA337822803 rs1289719031 |
700 | E>Q | No |
ClinGen gnomAD |
|
|
CA503639 rs778768161 |
701 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs371539737 CA503632 |
702 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750654773 CA503634 |
702 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503635 rs750654773 |
702 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138911665 CA337822655 |
703 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1569930949 CA337822580 |
703 | E>D | No |
ClinGen Ensembl |
|
|
CA503631 rs138911665 |
703 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138911665 CA337822660 |
703 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763449605 CA503630 |
704 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763449605 CA503629 |
704 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759940488 CA503624 |
705 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA503626 rs138652036 |
705 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA16731201 rs140866034 |
706 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs770527458 CA503619 |
707 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs775129618 CA503618 CA16731185 |
708 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503616 rs771553694 |
709 | D>E | No |
ClinGen ExAC |
|
|
CA503617 rs772716810 |
709 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA503613 rs748106765 |
710 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778767811 CA503612 |
710 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA503610 rs749054355 |
711 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA503609 rs780019064 |
711 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751734936 CA503606 |
713 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757498068 CA503607 |
713 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs751734936 CA337822117 |
713 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1557614280 CA916087685 |
714 | E>DN | No |
ClinGen Ensembl |
|
|
rs1378165825 CA337821813 |
715 | D>A | No |
ClinGen TOPMed |
|
|
CA16731103 rs988839199 |
715 | D>N | No |
ClinGen gnomAD |
|
|
CA337821758 CA337821755 rs1202548268 |
716 | G>R | No |
ClinGen gnomAD |
|
|
CA337821744 rs1569929715 |
717 | D>A | No |
ClinGen Ensembl |
|
|
rs370176089 CA503564 |
717 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA16730709 rs370176089 |
717 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs557736773 CA503563 |
718 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1027543032 CA16730698 |
718 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs201894720 CA337821705 |
719 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749777544 CA503562 |
719 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA16730659 rs534618296 |
719 | D>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs567016709 CA503560 |
720 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781632129 CA503558 |
721 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA503557 rs756794372 |
721 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA337821672 rs553649720 |
722 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA503556 rs200633429 |
722 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA503555 rs553649720 |
722 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1476088398 CA337821662 |
723 | G>E | No |
ClinGen gnomAD |
|
|
CA16730595 rs960596303 |
725 | A>G | No |
ClinGen gnomAD |
|
|
CA337821631 rs960596303 |
725 | A>V | No |
ClinGen gnomAD |
|
|
CA337821623 rs1252089178 |
726 | P>L | No |
ClinGen gnomAD |
|
|
CA337821620 rs1449633685 |
727 | G>W | No |
ClinGen gnomAD |
|
|
rs1269251606 CA337821602 |
728 | E>A | No |
ClinGen gnomAD |
|
|
CA503550 rs776229392 |
728 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761932405 CA503548 |
730 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs768695287 CA503546 |
732 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs774608603 CA503547 |
732 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA337821530 rs1000874657 |
733 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA16730569 rs1000874657 |
733 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA503544 rs780132632 |
734 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503542 rs746391929 |
734 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs780132632 CA503545 |
734 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770143402 CA503543 |
734 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs536424031 CA503541 |
735 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs961028131 CA16730557 |
735 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs757699867 CA503540 |
736 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA337821461 rs1248187846 |
737 | E>G | No |
ClinGen gnomAD |
|
|
CA16730555 rs901756476 |
737 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA337821467 rs901756476 |
737 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA503538 rs777608645 |
738 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs979814445 CA16730553 |
738 | D>V | No |
ClinGen gnomAD |
|
|
rs550652895 CA503536 |
739 | E>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1278053687 CA337821434 |
739 | E>G | No |
ClinGen gnomAD |
|
|
CA337821439 rs550652895 |
739 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA337821437 rs550652895 |
739 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1217646960 CA337821428 |
740 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA503534 rs759322501 |
741 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503532 rs530959606 |
742 | D>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA503533 rs753876662 |
742 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA503529 rs768820103 |
744 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA503530 rs768820103 |
744 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs571410564 CA503527 |
745 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769982751 CA503526 |
745 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA503525 rs746347876 |
746 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1048778932 CA16730480 |
747 | E>D | No |
ClinGen TOPMed |
|
|
rs1247077336 CA337821340 |
747 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1450035904 CA337821318 |
748 | D>N | No |
ClinGen gnomAD |
|
|
rs747335515 CA503521 |
749 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA337821304 rs747335515 |
749 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1279585914 CA337821287 |
750 | D>G | No |
ClinGen gnomAD |
|
|
rs1279585914 CA337821289 |
750 | D>R | No |
ClinGen gnomAD |
No associated diseases with Q9Y3T9
No regional properties for Q9Y3T9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9Y3T9 | |||
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome | A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| Noc1p-Noc2p complex | A heterodimer associated with 90S and 66S preribosomes. Predominantly, but not exclusively, nucleolar; involved in ribosomal large subunit biogenesis. |
| Noc2p-Noc3p complex | A heterodimer associated with 66S preribosomes; predominantly nucleoplasmic, but also locates to the nucleolus; involved in ribosomal large subunit biogenesis. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| DNA-binding transcription factor binding | Binding to a DNA-binding transcription factor, a protein that interacts with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. |
| histone binding | Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaryotic or archaeal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in gene regulation and DNA replication. They may be chemically modified (methylated, acetlyated and others) to regulate gene transcription. |
| nucleosome binding | Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| transcription corepressor activity | A transcription coregulator activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound DNA-binding transcription factor, either on its own or as part of a complex. Corepressors often act by altering chromatin structure and modifications. For example, one class of transcription corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
| cellular response to UV | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers. |
| negative regulation of B cell apoptotic process | Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process. |
| negative regulation of histone acetylation | Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein. |
| negative regulation of intrinsic apoptotic signaling pathway | Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| ribosomal large subunit biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P39744 | NOC2 | Nucleolar complex protein 2 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q3SYU1 | NOC2L | Nucleolar complex protein 2 homolog | Bos taurus (Bovine) | PR |
| Q9VIF0 | CG9246 | Nucleolar complex protein 2 homolog | Drosophila melanogaster (Fruit fly) | PR |
| Q9WV70 | Noc2l | Nucleolar complex protein 2 homolog | Mus musculus (Mouse) | PR |
| O17580 | pro-2 | Nucleolar complex protein 2 homolog | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAAAGSRKRR | LAELTVDEFL | ASGFDSESES | ESENSPQAET | REAREAARSP | DKPGGSPSAS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RRKGRASEHK | DQLSRLKDRD | PEFYKFLQEN | DQSLLNFSDS | DSSEEEEGPF | HSLPDVLEEA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SEEEDGAEEG | EDGDRVPRGL | KGKKNSVPVT | VAMVERWKQA | AKQRLTPKLF | HEVVQAFRAA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VATTRGDQES | AEANKFQVTD | SAAFNALVTF | CIRDLIGCLQ | KLLFGKVAKD | SSRMLQPSSS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PLWGKLRVDI | KAYLGSAIQL | VSCLSETTVL | AAVLRHISVL | VPCFLTFPKQ | CRMLLKRMVI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VWSTGEESLR | VLAFLVLSRV | CRHKKDTFLG | PVLKQMYITY | VRNCKFTSPG | ALPFISFMQW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TLTELLALEP | GVAYQHAFLY | IRQLAIHLRN | AMTTRKKETY | QSVYNWQYVH | CLFLWCRVLS |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TAGPSEALQP | LVYPLAQVII | GCIKLIPTAR | FYPLRMHCIR | ALTLLSGSSG | AFIPVLPFIL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EMFQQVDFNR | KPGRMSSKPI | NFSVILKLSN | VNLQEKAYRD | GLVEQLYDLT | LEYLHSQAHC |
| 550 | 560 | 570 | 580 | 590 | 600 |
| IGFPELVLPV | VLQLKSFLRE | CKVANYCRQV | QQLLGKVQEN | SAYICSRRQR | VSFGVSEQQA |
| 610 | 620 | 630 | 640 | 650 | 660 |
| VEAWEKLTRE | EGTPLTLYYS | HWRKLRDREI | QLEISGKERL | EDLNFPEIKR | RKMADRKDED |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RKQFKDLFDL | NSSEEDDTEG | FSERGILRPL | STRHGVEDDE | EDEEEGEEDS | SNSEDGDPDA |
| 730 | 740 | ||||
| EAGLAPGELQ | QLAQGPEDEL | EDLQLSEDD |