Q9H0A0
Gene name |
NAT10 |
Protein name |
RNA cytidine acetyltransferase |
Names |
18S rRNA cytosine acetyltransferase, N-acetyltransferase 10, N-acetyltransferase-like protein, hALP |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:55226 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for Q9H0A0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 6VLA | NMR | - | A | 891-907 | PDB |
| 7MQ8 | EM | 360 A | NJ/NK | 1-1025 | PDB |
| 7MQ9 | EM | 387 A | NJ/NK | 1-1025 | PDB |
| AF-Q9H0A0-F1 | Predicted | AlphaFoldDB |
832 variants for Q9H0A0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA380035798 rs751981901 |
2 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1173935817 CA380035804 |
2 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA5942091 rs751981901 |
2 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1173935817 CA380035803 |
2 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs140188192 CA5942093 |
3 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs753292389 CA5942095 |
3 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs140188192 CA5942092 |
3 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1395223866 CA380035817 |
4 | K>E | No |
ClinGen gnomAD |
|
|
CA380035839 rs1304112079 |
5 | K>M | No |
ClinGen TOPMed |
|
|
rs1304112079 TCGA novel CA380035837 |
5 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen TOPMed NCI-TCGA |
|
CA380035860 rs1365244638 |
7 | D>G | No |
ClinGen TOPMed |
|
|
rs1038724831 CA220402916 |
7 | D>Y | No |
ClinGen Ensembl |
|
|
rs777397042 CA5942098 |
8 | N>S | No |
ClinGen ExAC gnomAD |
|
|
COSM926596 CA5942100 rs756936856 |
9 | R>* | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA380035881 rs1351549807 |
9 | R>Q | No |
ClinGen gnomAD |
|
|
CA220402936 rs1031697980 |
10 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs745685344 CA5942102 |
11 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA5942103 rs745685344 |
11 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5942101 rs374897204 |
11 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775375544 CA5942104 |
13 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775375544 CA380035913 |
13 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220402981 rs900294414 |
17 | G>E | No |
ClinGen Ensembl |
|
|
rs773358163 CA380036008 |
21 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942108 rs773358163 |
21 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM926597 rs143567201 CA5942107 |
21 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs999814091 CA220402996 |
23 | R>K | No |
ClinGen Ensembl |
|
|
rs377521480 CA5942109 |
24 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380036042 rs377521480 |
24 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1348879373 CA380036063 |
27 | V>I | No |
ClinGen gnomAD |
|
|
CA5942110 rs766659522 |
28 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA5942111 rs371035269 |
29 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380036087 rs1377837901 |
29 | V>F | No |
ClinGen gnomAD |
|
|
rs184510181 CA5942112 |
30 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs768057491 CA5942113 |
31 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753240917 COSM926598 CA220403005 |
32 | R>* | Variant assessed as Somatic; 0.0 impact. skin endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs753240917 CA5942114 |
32 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380036116 rs1330560566 |
32 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs761255172 CA5942116 |
34 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA380036138 rs1565105022 |
34 | K>R | No |
ClinGen Ensembl |
|
|
rs867960570 CA220403021 |
36 | Q>* | No |
ClinGen Ensembl |
|
| TCGA novel | 39 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761045081 CA5942135 |
39 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA380036204 rs1264983018 |
41 | H>N | No |
ClinGen TOPMed |
|
|
rs1565105246 CA380036214 |
42 | H>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs754350515 CA5942137 |
43 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs764683148 CA5942136 |
43 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs761355482 CA5942138 |
44 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA380036238 rs1222887949 |
45 | S>F | No |
ClinGen gnomAD |
|
|
rs534066272 CA5942139 |
50 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5942141 rs758062189 |
52 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942142 rs758062189 |
52 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5942140 rs552744350 COSM1297993 |
52 | R>W | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1356827505 CA380036290 |
54 | S>L | No |
ClinGen gnomAD |
|
|
rs776533696 CA220403373 |
54 | S>P | No |
ClinGen Ensembl |
|
|
rs1384756455 CA380036295 |
55 | V>A | No |
ClinGen TOPMed |
|
|
rs61735314 CA5942147 |
59 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5942148 rs150022391 |
60 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs746018093 CA5942149 |
61 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs772453274 CA5942150 |
62 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1157989660 CA380036356 |
64 | G>A | No |
ClinGen TOPMed |
|
|
rs1361415114 CA380036371 |
66 | S>I | No |
ClinGen gnomAD |
|
|
rs770318887 CA5942173 |
68 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1238911472 CA380036664 |
69 | R>Q | No |
ClinGen gnomAD |
|
|
rs569420154 CA5942174 |
69 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 70 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765851151 CA5942176 |
73 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs538386063 CA5942177 |
74 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA5942178 rs558723919 |
74 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs558723919 CA380036720 |
74 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA380036755 rs1265911478 |
78 | K>E | No |
ClinGen TOPMed |
|
|
CA5942180 rs752568706 |
81 | K>E | No |
ClinGen ExAC |
|
|
rs756065274 CA5942181 |
81 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA220405657 rs1048857609 |
82 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA380036806 rs1048857609 |
82 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1445393998 CA380036839 |
85 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA380036836 rs1445393998 |
85 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA5942184 rs143140314 |
86 | N>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs780055048 CA5942185 |
87 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1300368202 CA380036858 |
87 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA220405698 rs1006206686 |
87 | I>V | No |
ClinGen gnomAD |
|
|
rs1258619885 CA380036877 |
89 | Q>R | No |
ClinGen gnomAD |
|
|
rs1590760482 CA380036904 |
91 | D>A | No |
ClinGen Ensembl |
|
| TCGA novel | 92 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1590760491 CA380036966 |
94 | E>D | No |
ClinGen Ensembl |
|
|
rs1367593202 CA380037000 |
97 | I>V | No |
ClinGen TOPMed |
|
|
rs748538256 CA5942190 |
98 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942188 rs781583549 |
98 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748538256 CA5942189 |
98 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942191 rs369518980 |
100 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380037036 rs1464951092 |
101 | N>D | No |
ClinGen TOPMed |
|
|
CA220405748 rs368151624 |
103 | R>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs770413727 CA5942193 COSM926600 |
103 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1326303861 CA380037082 |
104 | Y>* | No |
ClinGen gnomAD |
|
|
CA5942194 rs773735710 |
104 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1451769812 CA380037085 |
105 | C>R | No |
ClinGen TOPMed |
|
|
CA220405779 rs953538948 |
106 | Y>H | No |
ClinGen Ensembl |
|
|
rs1245812338 CA380037117 |
107 | Y>C | No |
ClinGen TOPMed |
|
|
rs759186425 CA5942195 |
108 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs569801712 CA220405799 |
109 | E>K | No |
ClinGen gnomAD |
|
|
CA380037172 rs1220233903 |
112 | K>E | No |
ClinGen gnomAD |
|
|
rs1056314102 CA220405811 |
113 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA380037198 rs1212688072 |
114 | L>R | No |
ClinGen gnomAD |
|
|
rs764047684 CA5942199 |
119 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942201 rs761670685 |
120 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA380037258 rs1194859763 |
120 | M>T | No |
ClinGen gnomAD |
|
|
rs1021018885 CA220405815 |
122 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA5942203 rs577409521 |
124 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA380037748 rs1379437127 |
125 | D>Y | No |
ClinGen gnomAD |
|
|
rs752854377 CA5942224 |
127 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201730594 CA380037796 |
128 | A>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201730594 CA5942225 |
128 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1202701453 CA380037823 |
130 | T>I | No |
ClinGen gnomAD |
|
|
CA220407100 rs1014412725 |
132 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs778826697 CA220407105 |
133 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA220407108 rs918593367 |
135 | A>T | No |
ClinGen TOPMed |
|
|
rs1353759501 CA380037889 |
136 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1413989525 CA380037894 |
137 | T>A | No |
ClinGen gnomAD |
|
|
CA5942227 rs754172923 |
140 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs757687750 CA5942228 |
141 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs746453112 CA5942231 |
144 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs779256457 CA5942230 |
144 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380037995 rs1402876360 |
145 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 146 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5942232 rs757832661 |
146 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1048464232 CA220407156 |
147 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA380038023 rs1590761659 |
148 | V>I | No |
ClinGen Ensembl |
|
|
rs1590761685 CA380038071 |
152 | R>Q | No |
ClinGen Ensembl |
|
|
COSM926601 CA5942233 rs149812318 |
152 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs747876146 CA5942237 |
159 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1254373695 CA380038158 |
161 | Y>H | No |
ClinGen TOPMed |
|
|
rs769674662 CA5942238 |
162 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769674662 CA380038169 |
162 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1260408603 CA380038172 |
163 | V>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 163 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767514829 CA380038182 |
165 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767514829 CA5942241 |
165 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1425750471 CA380038713 |
166 | D>E | No |
ClinGen gnomAD |
|
|
rs764218708 CA5942261 |
166 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220408911 rs372913061 |
167 | V>G | No |
ClinGen Ensembl |
|
|
CA380038724 rs1332266078 |
168 | H>Q | No |
ClinGen TOPMed |
|
|
CA220408917 rs370756170 |
168 | H>R | No |
ClinGen ESP TOPMed |
|
| TCGA novel | 169 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1414038406 CA380038727 |
169 | S>P | No |
ClinGen TOPMed |
|
| TCGA novel | 172 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380038760 rs1420335548 |
173 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 174 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1478007234 CA380038773 |
175 | A>G | No |
ClinGen gnomAD |
|
|
rs1478007234 CA380038774 |
175 | A>V | No |
ClinGen gnomAD |
|
|
CA5942263 rs776714467 |
178 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1169521306 CA380038793 |
178 | D>H | No |
ClinGen gnomAD |
|
|
CA5942262 rs776714467 |
178 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380038817 rs1423298266 |
182 | R>K | No |
ClinGen TOPMed |
|
|
CA220408975 rs1032476011 |
183 | F>C | No |
ClinGen TOPMed |
|
|
CA220408948 rs1032476011 |
183 | F>Y | No |
ClinGen TOPMed |
|
|
rs374829766 CA220408982 |
185 | E>K | No |
ClinGen Ensembl |
|
|
rs1459650606 CA380038845 |
186 | R>K | No |
ClinGen gnomAD |
|
|
CA380039264 rs1389461541 |
188 | I>V | No |
ClinGen gnomAD |
|
|
rs753549575 CA5942292 |
191 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA5942294 rs778685348 |
193 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA5942293 rs757042673 |
193 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1282198780 CA380039342 |
194 | C>F | No |
ClinGen TOPMed |
|
| TCGA novel | 196 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs369790702 CA5942296 |
197 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942299 rs748227063 |
199 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs748227063 CA5942298 |
199 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220410613 rs200111530 |
200 | I>T | No |
ClinGen Ensembl |
|
|
rs773551563 CA5942300 |
201 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA5942301 rs763330010 |
202 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs527627222 CA5942303 |
203 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs527627222 CA5942302 |
203 | Q>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5942304 rs373094620 |
203 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1313905515 CA380039458 |
205 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1035124146 CA220410665 |
206 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA380039481 rs760221122 |
209 | I>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760221122 CA5942307 |
209 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753196669 CA5942306 |
209 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA5942309 rs200281086 COSM926603 |
213 | V>I | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs756917690 CA380039546 |
215 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs756917690 CA5942310 |
215 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs1434267446 CA380039571 |
216 | M>I | No |
ClinGen gnomAD |
|
|
CA5942311 rs764963032 |
216 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1176072072 CA380039578 |
217 | E>* | No |
ClinGen gnomAD |
|
|
rs1012270918 CA220410700 |
218 | A>P | No |
ClinGen TOPMed |
|
|
CA220410692 rs1012270918 |
218 | A>T | No |
ClinGen TOPMed |
|
|
RCV000888949 CA5942313 rs35674959 |
224 | P>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5942340 rs746145937 |
225 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA220414211 rs910899451 |
226 | E>G | No |
ClinGen Ensembl |
|
|
rs374071566 CA380040126 |
229 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942341 rs374071566 |
229 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942342 rs374071566 |
229 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942343 rs747501763 |
231 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA5942344 rs138465328 |
232 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761289589 CA5942346 |
234 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA380040230 rs764782708 |
237 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1428437936 CA380040233 |
238 | L>M | No |
ClinGen gnomAD |
|
|
rs367962262 CA5942349 |
240 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1196803415 CA380040267 |
240 | E>G | No |
ClinGen TOPMed |
|
|
rs149605086 CA5942350 |
243 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380040328 rs1590764637 |
245 | T>P | No |
ClinGen Ensembl |
|
|
CA5942351 rs144347888 |
246 | Q>E | No |
ClinGen ESP ExAC TOPMed |
|
|
rs144347888 CA380040338 |
246 | Q>K | No |
ClinGen ESP ExAC TOPMed |
|
|
CA380040359 rs1313024322 |
247 | P>T | No |
ClinGen gnomAD |
|
|
rs902319331 CA220414297 |
248 | V>M | No |
ClinGen TOPMed |
|
|
rs759420020 CA5942352 |
249 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs767544123 CA5942353 |
250 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA5942354 rs767544123 |
250 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1565109551 CA380040390 |
250 | V>M | No |
ClinGen Ensembl |
|
|
CA380040410 COSM174729 rs1309896070 |
251 | L>F | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA220414335 rs554929403 |
255 | C>W | No |
ClinGen 1000Genomes gnomAD |
|
|
CA5942357 rs779140576 |
258 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750603371 CA380040477 |
259 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA5942358 rs750603371 |
259 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs376848619 CA220417224 |
263 | A>V | No |
ClinGen ESP TOPMed |
|
|
rs140175046 CA5942384 |
264 | V>L | No |
ClinGen ESP ExAC |
|
|
CA5942385 rs371140580 |
268 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380041646 rs1249207499 |
269 | E>G | No |
ClinGen gnomAD |
|
|
CA220417228 rs1052004026 |
269 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA5942389 rs748712610 |
270 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748712610 CA5942388 |
270 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1344804150 CA380041685 |
272 | S>P | No |
ClinGen TOPMed |
|
|
CA5942391 rs759270288 |
276 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs775450573 CA5942393 |
277 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1167623991 CA380041761 |
278 | S>T | No |
ClinGen gnomAD |
|
|
rs912210828 CA220417294 |
279 | T>A | No |
ClinGen TOPMed |
|
|
rs760650469 CA5942394 |
279 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA5942396 rs776678760 |
280 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs758573486 CA220417311 |
281 | A>G | No |
ClinGen Ensembl |
|
|
rs1403436090 CA380041837 |
284 | A>V | No |
ClinGen gnomAD |
|
|
CA220417317 rs939710595 |
285 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1298201015 CA380041851 |
286 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA220417320 rs754416795 |
286 | R>Q | No |
ClinGen Ensembl |
|
|
CA5942400 rs373535671 |
288 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373535671 CA5942399 |
288 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766545139 CA5942398 |
288 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 289 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5942403 rs756507373 |
293 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs376383993 CA5942404 |
294 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370205958 CA5942406 |
297 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380041999 rs1263575708 |
298 | I>M | No |
ClinGen gnomAD |
|
|
CA380042003 rs1428959264 |
299 | A>S | No |
ClinGen gnomAD |
|
|
CA5942408 rs201610017 |
301 | A>V | Variant assessed as Somatic; 4.622e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA380042026 rs1590767856 |
302 | V>G | No |
ClinGen Ensembl |
|
|
rs775322184 CA5942410 |
302 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1365435416 CA380042040 |
304 | F>L | No |
ClinGen gnomAD |
|
|
CA380042071 rs1309004001 |
307 | S>C | No |
ClinGen gnomAD |
|
|
CA220418061 rs770492925 |
308 | N>D | No |
ClinGen Ensembl |
|
|
CA5942435 rs368444330 |
308 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs775627075 CA5942436 |
312 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 313 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5942438 rs764320498 |
318 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA5942439 rs151054334 |
320 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA220418096 rs776208510 |
320 | H>Y | No |
ClinGen Ensembl |
|
|
CA5942440 rs762126537 |
321 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs139800295 CA5942441 |
322 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 326 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751029742 CA5942442 |
329 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA5942443 rs149713426 |
330 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA220418152 rs999721309 |
333 | L>R | No |
ClinGen Ensembl |
|
|
CA380042240 rs1289130325 |
333 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1431883944 CA380042263 |
336 | Q>R | No |
ClinGen gnomAD |
|
|
rs1461083385 CA380042301 |
340 | D>H | No |
ClinGen gnomAD |
|
|
CA5942456 rs776769551 |
341 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1049196531 CA220418491 |
341 | Y>N | No |
ClinGen TOPMed |
|
|
CA5942459 rs765762293 |
344 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs765762293 CA5942458 |
344 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1347350636 CA598448530 |
345 | Q>* | No |
ClinGen gnomAD |
|
|
CA220418556 rs554970145 |
345 | Q>R | No |
ClinGen Ensembl |
|
| TCGA novel | 347 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380042348 rs1365312882 |
347 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA220418558 rs148295060 |
351 | F>L | No |
ClinGen 1000Genomes |
|
|
CA5942460 rs549960154 |
355 | V>A | No |
ClinGen 1000Genomes ExAC |
|
|
CA220418568 rs1045755124 |
357 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs765937549 CA5942461 |
358 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1306960471 CA380042428 |
359 | N>Y | No |
ClinGen gnomAD |
|
|
rs1268846838 CA380042441 |
361 | F>L | No |
ClinGen TOPMed |
|
|
CA5942462 COSM926606 rs751108174 |
362 | R>* | Variant assessed as Somatic; 9.25e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA220418589 rs887949387 |
362 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA220418595 rs376062963 |
363 | E>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1294525589 CA380042453 |
363 | E>Q | No |
ClinGen gnomAD |
|
|
rs1356359432 CA380042466 |
365 | R>G | No |
ClinGen TOPMed |
|
|
CA5942463 rs570195769 |
365 | R>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1565112346 CA380042476 |
366 | Q>R | No |
ClinGen Ensembl |
|
|
CA5942464 rs780873019 |
367 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA380042489 rs1237797630 |
368 | I>T | No |
ClinGen TOPMed |
|
|
rs898676939 CA220420746 |
371 | I>T | No |
ClinGen Ensembl |
|
|
CA380042825 rs1206416997 |
372 | H>P | No |
ClinGen gnomAD |
|
|
rs1206416997 CA380042826 |
372 | H>R | No |
ClinGen gnomAD |
|
|
CA380042824 rs1463871042 |
372 | H>Y | No |
ClinGen gnomAD |
|
|
rs1442829245 CA380042834 |
373 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 374 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778898900 CA5942488 |
377 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA380042870 rs1305926944 |
379 | L>V | No |
ClinGen TOPMed |
|
|
CA5942490 rs147832913 |
385 | V>A | No |
ClinGen ESP ExAC gnomAD |
|
|
CA380042923 rs1311459392 |
387 | I>T | No |
ClinGen gnomAD |
|
|
CA5942493 rs770171008 |
392 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA5942494 rs773604567 |
393 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs147022056 CA5942495 |
394 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942498 rs774913808 |
397 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA5942500 rs759976780 |
398 | V>A | No |
ClinGen ExAC |
|
|
CA380042990 rs1443551383 |
398 | V>L | No |
ClinGen gnomAD |
|
|
rs779606778 CA5942502 |
402 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1411718401 CA380043021 |
403 | G>C | No |
ClinGen TOPMed |
|
|
CA5942503 rs760222286 |
404 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA380043030 rs1264559242 |
405 | Y>H | No |
ClinGen gnomAD |
|
|
CA380043039 rs1214845923 |
406 | L>V | No |
ClinGen Ensembl |
|
|
rs1181851214 CA380043045 |
407 | V>L | No |
ClinGen TOPMed |
|
|
rs372533774 CA5942505 |
409 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372533774 CA5942504 |
409 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380043094 rs1180421291 |
414 | N>S | No |
ClinGen TOPMed |
|
|
CA380043408 rs1485900688 |
416 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1390436223 CA380043423 |
418 | G>D | No |
ClinGen gnomAD |
|
|
CA5942531 rs754067052 |
419 | T>A | No |
ClinGen ExAC |
|
|
rs570820436 CA5942533 |
421 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942532 rs757454002 |
421 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380043445 rs1228410751 |
422 | S>L | No |
ClinGen gnomAD |
|
|
CA380043459 rs1242122696 |
425 | L>F | No |
ClinGen TOPMed |
|
|
CA380043467 rs1320626807 |
426 | K>R | No |
ClinGen TOPMed |
|
|
rs1339529635 CA380043472 |
427 | L>V | No |
ClinGen gnomAD |
|
|
CA5942535 rs772547003 |
428 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942537 rs780534353 |
431 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942538 rs747520569 |
432 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA5942539 rs543860297 |
432 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 432 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5942540 rs147641652 |
433 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380043531 rs149021799 |
436 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1216646 CA5942542 rs149021799 |
436 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA380043536 rs1167427092 |
437 | Q>E | No |
ClinGen TOPMed |
|
|
CA380043553 rs1446571309 |
439 | Q>E | No |
ClinGen gnomAD |
|
|
rs772967034 CA5942543 |
441 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA5942544 rs183358693 |
442 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA380043603 rs1159851636 |
446 | N>K | No |
ClinGen TOPMed |
|
|
CA5942546 rs751472924 |
448 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs555950800 CA5942547 |
449 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148211973 CA5942548 COSM170134 |
450 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA380043643 rs1313284738 |
453 | R>T | No |
ClinGen gnomAD |
|
|
rs1207722868 CA380043655 |
455 | A>S | No |
ClinGen TOPMed |
|
|
CA220423188 rs375060299 |
455 | A>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA380043664 rs1260803802 |
456 | S>L | No |
ClinGen TOPMed |
|
|
CA380043681 rs755508883 |
457 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA5942577 rs755508883 |
457 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA5942580 rs770678197 |
458 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942579 rs143254503 |
458 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5942581 rs774198862 |
459 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA5942582 rs745648324 |
460 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs775224787 CA5942584 |
461 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
VAR_059858 rs2957516 CA5942583 |
461 | Y>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5942585 rs760676490 |
463 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA380043708 rs760676490 |
463 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1253347709 CA380043718 |
464 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1347233552 CA380043729 |
466 | Q>R | No |
ClinGen gnomAD |
|
|
rs1220012305 CA380043737 |
467 | E>G | No |
ClinGen gnomAD |
|
|
rs111341056 CA380043742 |
468 | S>A | No |
ClinGen TOPMed |
|
|
rs111341056 CA220423619 |
468 | S>P | No |
ClinGen TOPMed |
|
|
rs765183435 CA5942586 |
470 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146685334 CA5942589 |
472 | A>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5942588 rs773370564 |
472 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773370564 CA5942587 |
472 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146685334 CA5942590 |
472 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA380043769 rs1238571091 |
473 | P>S | No |
ClinGen TOPMed |
|
|
rs1271475911 CA380043797 |
477 | V>G | No |
ClinGen gnomAD |
|
|
CA5942592 rs767925226 |
477 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs753084358 CA5942593 |
479 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs753369038 CA5942596 |
481 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA5942595 rs373766473 |
481 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1171919957 CA380043830 |
482 | N>T | No |
ClinGen gnomAD |
|
|
rs1370710460 CA380043833 |
483 | D>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 483 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755248703 CA220423659 |
485 | L>P | No |
ClinGen Ensembl |
|
|
CA380043852 rs1429014352 |
486 | C>S | No |
ClinGen gnomAD |
|
|
rs768900502 CA220423666 |
489 | C>F | No |
ClinGen gnomAD |
|
|
rs1367172919 CA380043887 |
491 | N>D | No |
ClinGen gnomAD |
|
|
rs553656635 CA5942597 |
491 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778707493 CA5942598 |
492 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942600 rs771935262 |
494 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942599 rs138988892 |
494 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs779923293 CA5942601 |
495 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1156807537 CA380043915 |
496 | V>I | No |
ClinGen TOPMed |
|
|
rs1565115285 CA380043941 |
498 | G>D | No |
ClinGen Ensembl |
|
|
CA380043953 rs1226804779 |
499 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
CA380043965 rs1417739862 |
500 | P>L | No |
ClinGen gnomAD |
|
|
rs768605764 CA5942603 |
501 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380043990 rs1332677834 |
502 | P>L | No |
ClinGen gnomAD |
|
|
rs776480746 CA5942604 |
503 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA380044052 rs763006405 |
507 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5942605 rs763006405 |
507 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380044147 rs1332523360 |
509 | Y>* | No |
ClinGen gnomAD |
|
|
rs1464013273 CA380044143 |
509 | Y>C | No |
ClinGen gnomAD |
|
|
CA380044141 rs1464013273 |
509 | Y>F | No |
ClinGen gnomAD |
|
|
rs558445588 CA5942620 |
509 | Y>H | No |
ClinGen 1000Genomes |
|
|
rs558445588 CA5942621 |
509 | Y>N | No |
ClinGen 1000Genomes |
|
|
CA380044199 rs1239067068 |
513 | D>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 513 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380044200 rs1239067068 |
513 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA380044217 rs1162646961 |
515 | L>V | No |
ClinGen gnomAD |
|
|
CA220424180 rs879011281 |
518 | Y>H | No |
ClinGen Ensembl |
|
|
CA220424201 rs1013698684 |
520 | K>N | No |
ClinGen TOPMed |
|
|
rs140879112 CA5942625 |
520 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA220424207 rs1025136845 |
521 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs748078411 CA5942626 |
523 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA5942627 rs770936080 |
525 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1455654163 CA380044367 |
526 | L>F | No |
ClinGen gnomAD |
|
|
CA5942628 rs774433383 |
526 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA380044385 rs759711543 |
528 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374680907 CA5942631 |
528 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5942630 rs759711543 |
528 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220424252 rs981911173 |
529 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 529 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs981911173 CA380044389 |
529 | L>V | No |
ClinGen gnomAD |
|
|
rs142148595 CA5942632 |
530 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764375602 CA5942633 |
531 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146382635 CA5942634 |
533 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs146382635 CA220424257 |
533 | Y>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA220424279 rs774400250 |
534 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs749925063 CA5942637 |
535 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380044436 rs1235691455 |
537 | H>Y | No |
ClinGen gnomAD |
|
|
CA220424292 rs757893540 |
539 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942638 rs757893540 |
539 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942640 rs766037793 |
539 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA5942639 rs766037793 |
539 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA5942662 rs139767479 |
542 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139767479 CA5942661 |
542 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1407152294 CA380044485 |
543 | N>D | No |
ClinGen gnomAD |
|
|
rs149555377 CA5942663 |
543 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1388916429 CA380044498 |
544 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA5942665 rs758446729 |
550 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1231801236 CA380044556 |
551 | A>G | No |
ClinGen gnomAD |
|
|
rs1231801236 CA380044558 |
551 | A>V | No |
ClinGen gnomAD |
|
|
rs1348302891 CA380044630 |
555 | H>R | No |
ClinGen TOPMed |
|
|
CA5942666 rs780024212 |
557 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200365213 CA380044656 |
557 | F>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs200365213 CA5942667 |
557 | F>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs768972603 CA5942669 |
561 | P>S | No |
ClinGen ExAC |
|
|
CA5942672 rs748508562 |
563 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs773784406 CA380044791 |
564 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942674 rs773784406 |
564 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942673 rs61735311 |
564 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1459714199 CA380044833 |
567 | Q>L | No |
ClinGen gnomAD |
|
|
rs1390546992 CA380044880 |
570 | L>V | No |
ClinGen gnomAD |
|
|
CA380044912 rs1385862844 |
571 | P>L | No |
ClinGen gnomAD |
|
|
rs767132634 CA5942679 |
574 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767132634 CA380044970 |
574 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs561909193 CA5942682 |
576 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5942681 rs147822972 |
576 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147822972 CA5942680 |
576 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753761149 CA5942683 |
577 | I>T | No |
ClinGen ExAC |
|
|
rs1246993651 CA380045033 |
578 | Q>* | No |
ClinGen gnomAD |
|
|
rs1194853029 CA380045039 |
578 | Q>L | No |
ClinGen TOPMed gnomAD |
|
|
CA380045205 rs1467166056 |
579 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA380045202 rs1467166056 |
579 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA380045224 rs1303303893 |
580 | C>Y | No |
ClinGen gnomAD |
|
|
rs1401049924 CA380045259 |
582 | E>Q | No |
ClinGen TOPMed |
|
|
rs752914219 CA5942707 |
585 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs756436278 CA5942708 |
587 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA5942709 rs778095767 COSM1627954 |
587 | R>H | kidney liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs778095767 CA220426204 |
587 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749592592 CA5942710 |
588 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380045372 rs1200786434 |
588 | Q>R | No |
ClinGen TOPMed |
|
|
rs771382736 CA5942711 |
589 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA380045384 rs1305180802 |
589 | S>P | No |
ClinGen gnomAD |
|
|
CA380045398 rs1296243002 |
590 | I>V | No |
ClinGen TOPMed |
|
|
CA5942712 rs779223798 |
592 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA380045475 rs1236294091 |
594 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs975693477 CA220426226 |
595 | S>P | No |
ClinGen TOPMed |
|
|
CA5942713 rs370862984 |
596 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771522746 CA5942714 |
596 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs768175245 CA5942718 |
600 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA5942719 rs768175245 |
600 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA5942720 rs761511280 |
601 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA5942721 rs765083421 |
608 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1176157042 CA380045678 |
609 | V>A | No |
ClinGen gnomAD |
|
|
rs1432768342 CA380045707 |
611 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA5942722 rs772962602 |
611 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA380045765 rs1170370022 |
613 | F>C | No |
ClinGen gnomAD |
|
|
rs200721605 CA5942734 |
614 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs373826063 CA220426421 |
615 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1168057255 CA380045790 |
616 | P>A | No |
ClinGen gnomAD |
|
|
rs1168057255 CA380045791 |
616 | P>S | No |
ClinGen gnomAD |
|
|
rs746510961 CA5942735 |
617 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220426456 rs903237711 |
619 | G>D | No |
ClinGen Ensembl |
|
| TCGA novel | 620 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380045832 rs1342076018 |
622 | S>F | No |
ClinGen gnomAD |
|
|
rs1434085046 CA380045846 |
624 | G>V | No |
ClinGen TOPMed |
|
| TCGA novel | 627 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380045862 rs1322748157 |
627 | V>G | No |
ClinGen gnomAD |
|
|
rs769422131 CA5942739 |
627 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs939143863 CA220426497 |
628 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs773168675 CA5942740 |
628 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942742 rs200962843 |
629 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380045869 rs200962843 |
629 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380045882 rs1248181508 |
631 | V>L | No |
ClinGen gnomAD |
|
|
CA5942745 rs764248574 |
633 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380045902 rs1415657847 |
634 | D>H | No |
ClinGen gnomAD |
|
|
rs751959938 CA5942772 |
638 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380045946 rs147631840 |
638 | M>R | No |
ClinGen ESP ExAC TOPMed |
|
|
CA5942771 rs147631840 |
638 | M>T | No |
ClinGen ESP ExAC TOPMed |
|
|
CA5942770 rs145242316 |
638 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA380045953 rs1483938246 |
639 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA380045955 rs1483938246 |
639 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1590777946 CA380045962 |
640 | Y>* | No |
ClinGen Ensembl |
|
|
CA220429625 rs888836034 |
640 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA380045967 rs1335792898 |
641 | G>A | No |
ClinGen TOPMed |
|
|
CA380045966 rs1335792898 |
641 | G>D | No |
ClinGen TOPMed |
|
|
rs755536867 CA5942773 |
642 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs200070922 CA220429630 |
642 | S>R | No |
ClinGen TOPMed |
|
|
CA220429638 rs996022154 |
643 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA220429641 rs867596578 |
643 | R>H | No |
ClinGen gnomAD |
|
|
CA380045978 rs867596578 |
643 | R>L | No |
ClinGen gnomAD |
|
|
rs1426033073 CA380045996 |
646 | Q>H | No |
ClinGen gnomAD |
|
|
CA380046017 rs781586743 CA5942774 |
650 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380046016 rs781586743 |
650 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752228317 CA5942775 COSM3719672 |
651 | Y>C | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA220429655 rs1007331549 |
652 | Y>C | No |
ClinGen Ensembl |
|
|
rs1308196003 CA380046050 |
654 | G>A | No |
ClinGen gnomAD |
|
|
CA220429656 rs1023077723 |
654 | G>S | No |
ClinGen TOPMed |
|
|
rs368361371 CA5942778 |
655 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777561623 CA5942777 |
655 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590778004 CA380046058 |
656 | F>V | No |
ClinGen Ensembl |
|
|
CA5942779 rs770802466 |
658 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1590778018 CA380046085 |
660 | E>G | No |
ClinGen Ensembl |
|
|
rs76447770 CA5942781 |
660 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA380046093 rs1590778024 |
661 | E>G | No |
ClinGen Ensembl |
|
|
CA380046103 rs772024616 |
662 | K>N | No |
ClinGen ExAC |
|
|
CA380046108 rs1250002785 |
663 | V>D | No |
ClinGen gnomAD |
|
|
rs1436277432 CA380046116 |
664 | L>R | No |
ClinGen gnomAD |
|
|
rs775351987 CA5942784 |
666 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA380046142 rs1250426667 |
668 | Q>L | No |
ClinGen gnomAD |
|
|
CA220429682 rs778791463 |
673 | V>I | No |
ClinGen TOPMed |
|
|
rs372051291 CA220429685 |
675 | S>N | No |
ClinGen gnomAD |
|
|
COSM1188204 rs773368813 CA5942787 |
676 | E>K | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA380046245 rs1323257297 |
681 | L>F | No |
ClinGen gnomAD |
|
|
CA5942807 rs749405641 |
683 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA380046270 rs1590779195 |
685 | I>F | No |
ClinGen Ensembl |
|
|
CA220430489 rs1000881534 |
685 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA380046274 rs140893294 |
686 | T>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942810 rs140893294 |
686 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942812 rs776005823 |
687 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA5942811 rs767775994 |
687 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs527894514 CA5942814 |
688 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs150081419 CA5942813 |
688 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1590779234 CA380046299 |
690 | D>A | No |
ClinGen Ensembl |
|
|
CA220430553 rs992300997 |
699 | N>D | No |
ClinGen Ensembl |
|
|
rs764942080 CA380046358 CA5942818 |
699 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA380046356 rs1465436377 |
699 | N>S | No |
ClinGen gnomAD |
|
|
CA380046365 rs1484642985 |
700 | E>D | No |
ClinGen TOPMed |
|
|
rs750053373 CA5942819 |
702 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750053373 CA380046374 |
702 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750053373 CA220430558 |
702 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942820 rs758157776 |
703 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746905450 CA5942822 |
704 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs746905450 COSM926611 CA5942823 |
704 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs781153327 CA5942824 |
705 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145482727 CA5942825 |
705 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5942826 rs771064893 |
706 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380046413 rs1453878497 |
709 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA380046416 rs1288156009 |
709 | L>P | No |
ClinGen gnomAD |
|
|
CA5942828 rs369326894 |
710 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380046426 rs1313244780 |
711 | V>A | No |
ClinGen gnomAD |
|
|
CA380046423 rs1430779416 |
711 | V>I | No |
ClinGen TOPMed |
|
|
rs772443478 CA5942830 |
712 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA220430593 rs749306426 |
713 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1231657796 CA380046434 |
713 | Y>N | No |
ClinGen gnomAD |
|
|
rs1413965590 CA380046441 |
714 | G>S | No |
ClinGen TOPMed |
|
|
CA5942833 rs761172450 |
715 | L>F | No |
ClinGen ExAC |
|
|
CA220430605 rs764687282 |
716 | T>A | No |
ClinGen ExAC TOPMed |
|
|
CA5942836 rs777347192 |
716 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380046454 rs777347192 |
716 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942835 rs764687282 |
716 | T>S | No |
ClinGen ExAC TOPMed |
|
| TCGA novel | 718 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380046464 rs1565117767 |
718 | R>K | No |
ClinGen Ensembl |
|
|
rs759259465 CA5942860 |
721 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772895064 CA5942861 |
725 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5942862 rs752580650 |
725 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5942863 rs755975033 |
726 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs777816489 CA380046735 |
727 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777816489 CA5942864 |
727 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942866 rs758571890 |
730 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA380046763 rs1215565599 |
730 | P>T | No |
ClinGen TOPMed |
|
|
CA380046782 rs1307322829 |
731 | V>A | No |
ClinGen gnomAD |
|
|
rs780359105 CA5942867 |
731 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1025147164 CA380046790 |
732 | Y>F | No |
ClinGen gnomAD |
|
|
CA380046785 rs1203335360 |
732 | Y>H | No |
ClinGen gnomAD |
|
|
CA220430801 rs1025147164 |
732 | Y>S | No |
ClinGen gnomAD |
|
|
CA5942869 rs769097484 |
736 | T>I | No |
ClinGen ExAC |
|
|
rs781716877 CA5942870 |
737 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA380046929 rs1345125617 |
738 | N>K | No |
ClinGen gnomAD |
|
|
CA5942892 rs755224640 |
739 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 742 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5942895 rs756565845 COSM926612 |
742 | G>R | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs778072472 CA5942896 |
743 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1224968001 CA380046973 |
745 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA380046979 rs1446343173 |
746 | C>F | No |
ClinGen TOPMed gnomAD |
|
|
rs770377826 CA5942898 |
750 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs137942423 CA5942900 |
751 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs137942423 CA5942899 |
751 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs376535676 CA5942901 |
753 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5942902 rs370581619 |
754 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA220432332 rs1029631063 |
756 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1029631063 CA380047044 |
756 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA380047052 rs1407426051 |
757 | E>V | No |
ClinGen gnomAD |
|
|
CA380047057 rs1304692399 |
758 | A>T | No |
ClinGen TOPMed |
|
|
rs1298420117 CA380047068 |
759 | D>E | No |
ClinGen gnomAD |
|
|
rs773357788 CA220432334 |
760 | Q>E | No |
ClinGen TOPMed |
|
|
rs1361650178 CA380047072 |
760 | Q>R | No |
ClinGen gnomAD |
|
|
rs1359108339 CA380047076 |
761 | G>R | No |
ClinGen TOPMed |
|
|
CA5942903 rs760321986 |
762 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs776385919 CA380047094 |
763 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942905 rs776385919 |
763 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942904 rs763965702 |
763 | W>L | No |
ClinGen ExAC gnomAD |
|
|
CA5942906 rs761845821 |
765 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs553338131 CA5942907 |
766 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA380047122 rs1353176086 |
768 | W>* | No |
ClinGen gnomAD |
|
|
CA5942908 rs751663766 |
768 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs764263367 CA5942932 |
771 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs754208731 CA5942933 |
772 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942934 rs371425797 |
772 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs963302450 CA220432514 |
773 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs199955231 CA5942936 |
773 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942938 rs779649525 |
774 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs757857939 CA5942937 |
774 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5942940 rs768336283 |
775 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs768336283 CA380047172 |
775 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA5942942 rs747948775 |
777 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780762003 CA5942941 |
777 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA380047186 rs747948775 |
777 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380047193 rs1463798966 |
778 | L>F | No |
ClinGen gnomAD |
|
|
CA380047195 rs1489170406 |
779 | L>F | No |
ClinGen gnomAD |
|
|
rs1327321820 CA380047205 |
780 | S>F | No |
ClinGen gnomAD |
|
|
rs759471990 CA5942943 |
781 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1440042192 CA380047215 |
782 | Q>* | No |
ClinGen gnomAD |
|
|
rs1023664492 CA220432545 |
782 | Q>R | No |
ClinGen TOPMed |
|
|
rs1208434679 CA380047232 |
784 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
CA380047238 rs1236857540 |
785 | T>S | No |
ClinGen gnomAD |
|
|
CA220432556 rs971149308 |
787 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA220432559 rs867498285 |
788 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs773223753 CA5942944 |
789 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1269446906 CA380047273 |
790 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA5942946 rs764036678 |
794 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA380047310 rs1590781820 |
796 | Q>R | No |
ClinGen Ensembl |
|
|
rs1273856197 CA380047342 |
800 | M>T | No |
ClinGen gnomAD |
|
|
rs1212307061 CA380047367 |
804 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1212307061 CA380047368 |
804 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5942947 rs775607306 |
804 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs760717042 CA5942948 |
806 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1458118369 CA380047397 |
807 | A>V | No |
ClinGen TOPMed |
|
|
rs766956292 CA5942976 |
810 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754450173 CA5942975 COSM1216647 |
810 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA380047431 rs1380363775 |
812 | E>D | No |
ClinGen TOPMed |
|
|
CA220433101 rs564952457 |
814 | E>K | No |
ClinGen gnomAD |
|
|
CA5942978 rs755795306 COSM3687276 |
815 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA380047451 rs1456362733 |
816 | L>F | No |
ClinGen TOPMed |
|
|
CA380047450 rs1456362733 |
816 | L>V | No |
ClinGen TOPMed |
|
|
CA380047478 rs1488931867 |
820 | Y>C | No |
ClinGen TOPMed |
|
|
rs1210170885 CA380047476 |
820 | Y>H | No |
ClinGen TOPMed |
|
|
rs749080288 CA5942980 |
821 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA5942981 rs371023260 |
822 | L>V | No |
ClinGen ESP ExAC TOPMed |
|
|
rs142026665 CA5942984 |
824 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199507528 CA380047502 |
824 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5942985 rs199507528 |
824 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5942983 rs142026665 |
824 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 825 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5942986 rs748279025 |
826 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs773493824 CA5942989 |
830 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5942988 rs201422965 |
830 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1159879516 CA380047542 |
831 | N>H | No |
ClinGen TOPMed |
|
|
rs1590192644 CA380047564 |
833 | V>G | No |
ClinGen Ensembl |
|
|
CA5942991 rs766663086 |
834 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA380047574 rs1015800918 |
835 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs774870513 CA5942992 |
835 | Y>D | No |
ClinGen ExAC |
|
|
rs1015800918 CA220433209 |
835 | Y>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5942996 rs138750317 |
837 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752231428 CA5942997 |
839 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220433237 rs149351119 |
839 | M>V | No |
ClinGen ESP TOPMed |
|
|
rs147472257 CA5942999 |
840 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755742164 CA5942998 |
840 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5943002 rs139994690 |
841 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 841 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5943001 rs564078800 |
841 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs745718990 CA5943003 |
843 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220433271 rs868597633 COSM1353647 |
844 | A>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs748225818 CA5943006 |
845 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA5943007 rs769864405 |
847 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1216645 rs777910148 CA5943008 |
847 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs777910148 CA380047650 |
847 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1235634 CA380047657 rs1461734477 |
848 | I>M | Variant assessed as Somatic; 0.0 impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1329369124 COSM1507935 CA380047675 |
851 | L>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1565119587 CA380047699 |
854 | L>R | No |
ClinGen Ensembl |
|
|
rs892398357 CA220433337 |
855 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA380047711 rs1452117216 |
856 | D>E | No |
ClinGen gnomAD |
|
|
rs1325851226 CA380047707 |
856 | D>N | No |
ClinGen gnomAD |
|
| rs1052313043 | 856 | D>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1365853894 CA380047720 |
858 | A>S | No |
ClinGen gnomAD |
|
|
CA5943011 rs774546313 |
860 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5943012 rs145204141 |
861 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA380047750 rs1214198764 |
863 | Q>R | No |
ClinGen gnomAD |
|
|
CA5943015 rs760205132 |
864 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220433672 rs913704852 |
865 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5943040 rs751461455 |
866 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380047774 rs751461455 |
866 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs984298048 CA220433685 |
868 | L>S | No |
ClinGen Ensembl |
|
|
CA5943042 rs781241396 |
870 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1214172700 CA380047816 |
873 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1214172700 CA380047815 |
873 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA380047818 rs1282273233 |
873 | Q>R | No |
ClinGen gnomAD |
|
|
rs1590193071 CA380047824 |
874 | H>Y | No |
ClinGen Ensembl |
|
|
CA5943043 rs753850727 |
876 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA5943044 rs147199387 |
877 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA220433729 rs921205686 |
882 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs746114824 CA5943046 |
883 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA380047887 rs746114824 |
883 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1264806196 CA380047894 |
884 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA380047912 rs758794385 |
887 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5943048 rs780534469 |
887 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5943047 rs758794385 |
887 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs151223396 CA5943050 |
888 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs151223396 CA380047919 |
888 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5943052 rs747541429 |
889 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA380047927 rs1246893673 |
890 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA380047931 rs1279694280 |
890 | Q>H | No |
ClinGen gnomAD |
|
|
CA380047946 rs1287168419 |
892 | M>I | No |
ClinGen TOPMed |
|
|
rs772695375 CA5943054 |
893 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA5943055 rs143997956 |
894 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5943056 rs766062723 |
896 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5943058 rs759386401 |
897 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1170993142 CA380047978 |
898 | I>L | No |
ClinGen TOPMed |
|
|
CA380047986 rs1565119985 |
899 | I>V | No |
ClinGen Ensembl |
|
|
CA5943061 rs375005009 |
900 | R>C | Variant assessed as Somatic; 4.619e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs375005009 CA380047992 |
900 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765389946 CA5943063 |
900 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA220433764 rs765389946 |
900 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA5943062 rs375005009 |
900 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5943064 rs750570995 |
901 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380047994 rs750570995 |
901 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244833034 CA380048004 |
902 | V>A | No |
ClinGen TOPMed |
|
|
rs146445845 CA5943065 |
902 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA220434118 rs985665671 |
905 | L>V | No |
ClinGen Ensembl |
|
|
rs775251238 CA5943078 |
906 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760629476 CA5943079 |
907 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs943130073 CA220434119 |
910 | Q>R | No |
ClinGen TOPMed |
|
|
rs1316702663 CA380048085 |
912 | K>N | No |
ClinGen TOPMed |
|
|
CA5943081 rs763985144 |
915 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1430426591 CA380048103 |
915 | E>G | No |
ClinGen TOPMed |
|
|
rs1178197211 CA380048111 |
916 | E>G | No |
ClinGen TOPMed |
|
|
rs1009250933 CA220434125 |
918 | M>L | No |
ClinGen TOPMed |
|
|
rs1020704115 CA220434127 |
918 | M>T | No |
ClinGen TOPMed |
|
|
rs201926792 CA5943082 |
921 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1422226473 CA380048148 |
922 | K>Q | No |
ClinGen gnomAD |
|
|
CA220434133 rs868309392 |
923 | D>N | No |
ClinGen gnomAD |
|
|
rs766639482 CA5943084 |
924 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1391360080 CA380048173 |
926 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA5943085 rs751841451 |
926 | M>R | No |
ClinGen ExAC gnomAD |
|
|
rs1391360080 CA380048174 |
926 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA5943087 rs140934116 RCV000965167 |
929 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs140934116 CA5943088 |
929 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs778313276 CA5943090 |
930 | M>T | No |
ClinGen ExAC |
|
|
rs372867574 CA5943091 |
933 | L>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1310622427 CA380048230 |
934 | S>T | No |
ClinGen TOPMed |
|
|
CA5943094 rs553463575 |
936 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5943116 rs746749335 |
942 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220434561 rs988870001 |
945 | Q>P | No |
ClinGen Ensembl |
|
|
rs201600938 CA5943117 |
948 | H>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5943118 rs201600938 |
948 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769896312 CA5943120 |
950 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380048364 rs1436775787 |
951 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 951 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774470787 CA5943121 |
953 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380048401 rs1590193891 |
957 | S>G | No |
ClinGen Ensembl |
|
|
rs916956578 CA220434597 |
957 | S>N | No |
ClinGen gnomAD |
|
|
CA5943122 rs759596221 |
958 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA220434610 rs979947653 |
958 | M>T | No |
ClinGen Ensembl |
|
|
CA5943123 rs200880136 |
959 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA380048415 rs1284205713 |
959 | D>H | No |
ClinGen gnomAD |
|
|
CA220434614 rs946315602 |
961 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA380048430 rs946315602 |
961 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1217745164 CA380048463 |
964 | I>T | No |
ClinGen gnomAD |
|
|
CA5943150 rs149217488 |
964 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5943151 rs371394777 |
966 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5943152 rs757873953 |
966 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757873953 CA380048476 |
966 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA380048475 rs757873953 |
966 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5943154 rs751116586 |
969 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1025537298 CA220435324 |
971 | E>G | No |
ClinGen Ensembl |
|
|
rs148378865 CA5943156 |
972 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380048514 rs1384666879 |
972 | W>R | No |
ClinGen gnomAD |
|
|
rs1565121080 CA380048535 |
974 | E>D | No |
ClinGen Ensembl |
|
| TCGA novel | 974 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747954861 CA5943157 |
977 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA220435333 rs951399585 |
979 | A>V | No |
ClinGen Ensembl |
|
|
CA5943158 rs142960948 |
980 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5943159 rs183448235 COSM926615 |
981 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
VAR_061894 RCV000970225 CA5943162 rs36006049 |
983 | A>T | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5943163 rs143930117 |
984 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA380048602 rs1443716650 |
984 | S>T | No |
ClinGen TOPMed |
|
|
CA380048631 rs1264178490 |
987 | S>T | No |
ClinGen gnomAD |
|
|
rs373863933 CA5943166 |
990 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5943165 rs373863933 |
990 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5943192 rs771341516 |
992 | K>E | No |
ClinGen ExAC |
|
|
rs1209488138 CA380048693 |
994 | R>K | No |
ClinGen gnomAD |
|
|
CA380048699 rs1262807880 |
995 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA5943194 rs367696829 |
997 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1459459084 CA380048725 |
998 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1459459084 CA380048726 |
998 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA380048733 rs1346401404 |
999 | K>N | No |
ClinGen TOPMed |
|
|
rs767159751 CA5943195 |
1000 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA220436900 rs767159751 |
1000 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs1380023734 CA380048741 |
1001 | E>K | No |
ClinGen gnomAD |
|
|
CA380048751 rs1438243773 |
1002 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1426829743 CA380048774 |
1005 | S>N | No |
ClinGen gnomAD |
|
|
rs1200457549 CA380048790 |
1007 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs371826067 CA5943197 |
1008 | L>* | No |
ClinGen ESP TOPMed gnomAD |
|
| rs772698051 | 1009 | K>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5943200 rs763857258 |
1010 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1012 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380048825 rs1423403810 |
1012 | E>Q | No |
ClinGen TOPMed |
|
|
CA380048832 rs1331970068 |
1013 | T>A | No |
ClinGen gnomAD |
|
|
rs552866247 CA5943202 |
1013 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA380048840 rs1444302709 |
1014 | K>R | No |
ClinGen gnomAD |
|
|
CA380048852 rs1190816709 |
1016 | K>E | No |
ClinGen TOPMed |
|
|
CA5943204 rs200149938 |
1016 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA380048872 rs1218904311 |
1018 | D>E | No |
ClinGen gnomAD |
|
|
CA220436928 rs118028707 |
1018 | D>G | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
| TCGA novel | 1018 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs773784521 | 1018 | D>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5943205 rs750380780 |
1019 | M>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1020 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA380048890 rs964363604 |
1021 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA380048891 rs1456879010 |
1021 | L>Q | No |
ClinGen gnomAD |
|
|
rs964363604 CA220436949 |
1021 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA380048895 rs1201450363 |
1022 | K>* | No |
ClinGen gnomAD |
|
|
CA5943207 rs755007330 |
1022 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1171658258 CA380048904 |
1023 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1171658258 COSM926617 CA380048902 |
1023 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA5943208 rs139546360 |
1023 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
No associated diseases with Q9H0A0
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome, telomeric region | The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres). |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| midbody | A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| telomerase holoenzyme complex | Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits. |
7 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| DNA polymerase binding | Binding to a DNA polymerase. |
| mRNA N-acetyltransferase activity | Catalysis of the reaction: a cytidine in mRNA + acetyl-CoA + ATP + H2O = ADP + an N(4)-acetylcytidine in mRNA + CoA + H(+) + phosphate. |
| N-acetyltransferase activity | Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| rRNA cytidine N-acetyltransferase activity | Catalysis of the reaction: acetyl-CoA + cytidine = CoA + N4-acetylcytidine. The cytidine is within the polynucleotide chain of an rRNA. |
| tRNA binding | Binding to a transfer RNA. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| negative regulation of telomere maintenance via telomerase | Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of telomeric repeats by telomerase. |
| positive regulation of translation | Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. |
| protein acetylation | The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic |
| regulation of centrosome duplication | Any process that modulates the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized. |
| rRNA acetylation involved in maturation of SSU-rRNA | Any rRNA acetylation that is involved in maturation of SSU-rRNA. |
| rRNA modification | The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically. |
| tRNA acetylation | The modification of tRNA structure by addition of an acetyl group to tRNA. An acetyl group is CH3CO-, derived from acetic |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P53914 | KRE33 | RNA cytidine acetyltransferase | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q8K224 | Nat10 | RNA cytidine acetyltransferase | Mus musculus (Mouse) | PR |
| O01757 | nath-10 | RNA cytidine acetyltransferase | Caenorhabditis elegans | PR |
| Q9XIK4 | At1g10490 | RNA cytidine acetyltransferase 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9M2Q4 | At3g57940 | RNA cytidine acetyltransferase 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MHRKKVDNRI | RILIENGVAE | RQRSLFVVVG | DRGKDQVVIL | HHMLSKATVK | ARPSVLWCYK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KELGFSSHRK | KRMRQLQKKI | KNGTLNIKQD | DPFELFIAAT | NIRYCYYNET | HKILGNTFGM |
| 130 | 140 | 150 | 160 | 170 | 180 |
| CVLQDFEALT | PNLLARTVET | VEGGGLVVIL | LRTMNSLKQL | YTVTMDVHSR | YRTEAHQDVV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GRFNERFILS | LASCKKCLVI | DDQLNILPIS | SHVATMEALP | PQTPDESLGP | SDLELRELKE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SLQDTQPVGV | LVDCCKTLDQ | AKAVLKFIEG | ISEKTLRSTV | ALTAARGRGK | SAALGLAIAG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AVAFGYSNIF | VTSPSPDNLH | TLFEFVFKGF | DALQYQEHLD | YEIIQSLNPE | FNKAVIRVNV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| FREHRQTIQY | IHPADAVKLG | QAELVVIDEA | AAIPLPLVKS | LLGPYLVFMA | STINGYEGTG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| RSLSLKLIQQ | LRQQSAQSQV | STTAENKTTT | TARLASARTL | YEVSLQESIR | YAPGDAVEKW |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LNDLLCLDCL | NITRIVSGCP | LPEACELYYV | NRDTLFCYHK | ASEVFLQRLM | ALYVASHYKN |
| 550 | 560 | 570 | 580 | 590 | 600 |
| SPNDLQMLSD | APAHHLFCLL | PPVPPTQNAL | PEVLAVIQVC | LEGEISRQSI | LNSLSRGKKA |
| 610 | 620 | 630 | 640 | 650 | 660 |
| SGDLIPWTVS | EQFQDPDFGG | LSGGRVVRIA | VHPDYQGMGY | GSRALQLLQM | YYEGRFPCLE |
| 670 | 680 | 690 | 700 | 710 | 720 |
| EKVLETPQEI | HTVSSEAVSL | LEEVITPRKD | LPPLLLKLNE | RPAERLDYLG | VSYGLTPRLL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| KFWKRAGFVP | VYLRQTPNDL | TGEHSCIMLK | TLTDEDEADQ | GGWLAAFWKD | FRRRFLALLS |
| 790 | 800 | 810 | 820 | 830 | 840 |
| YQFSTFSPSL | ALNIIQNRNM | GKPAQPALSR | EELEALFLPY | DLKRLEMYSR | NMVDYHLIMD |
| 850 | 860 | 870 | 880 | 890 | 900 |
| MIPAISRIYF | LNQLGDLALS | AAQSALLLGI | GLQHKSVDQL | EKEIELPSGQ | LMGLFNRIIR |
| 910 | 920 | 930 | 940 | 950 | 960 |
| KVVKLFNEVQ | EKAIEEQMVA | AKDVVMEPTM | KTLSDDLDEA | AKEFQEKHKK | EVGKLKSMDL |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| SEYIIRGDDE | EWNEVLNKAG | PNASIISLKS | DKKRKLEAKQ | EPKQSKKLKN | RETKNKKDMK |
| LKRKK |