Q9FY64
Gene name |
RPS15D (At5g09510, T5E8_310) |
Protein name |
40S ribosomal protein S15-4 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G09510 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FY64
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FY64-F1 | Predicted | AlphaFoldDB |
1 variants for Q9FY64
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_2956419_C_T | 13 | V>I | No | 1000Genomes |
No associated diseases with Q9FY64
1 regional properties for Q9FY64
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Ribosomal protein S15/S19, conserved site | 105 - 129 | IPR020934 |
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosolic ribosome | A ribosome located in the cytosol. |
| cytosolic small ribosomal subunit | The small subunit of a ribosome located in the cytosol. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| plasmodesma | A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
| polysomal ribosome | A ribosome bound to mRNA that forms part of a polysome. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| ribosomal small subunit assembly | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit. |
| translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q01855 | RPS15 | 40S ribosomal protein S15 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| P62841 | RPS15 | 40S ribosomal protein S15 | Homo sapiens (Human) | PR |
| Q08112 | RPS15A | 40S ribosomal protein S15-1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FIX6 | RPS15E | 40S ribosomal protein S15-5 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FML6 | RPS15F | 40S ribosomal protein S15-6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FY65 | RPS15C | 40S ribosomal protein S15-3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FY66 | RPS15B | 40S ribosomal protein S15-2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MADVEPEVAA | AGVPKKRTFK | KFAFKGVDLD | ALLDMSTDDL | VKLFSSRIRR | RFSRGLTRKP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MALIKKLRKA | KREAPAGEKP | EPVRTHLRNM | IIVPEMIGSI | IGVYNGKTFN | QVEIKPEMIG |
| 130 | 140 | 150 | |||
| HYLAEFSISY | KPVKHGRPGV | GATHSSRFIP | LK |