Q08112
Gene name |
RPS15A (RIG, RPS15, At1g04270, F19P19.29) |
Protein name |
40S ribosomal protein S15-1 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G04270 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q08112
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q08112-F1 | Predicted | AlphaFoldDB |
2 variants for Q08112
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_1142764_T_A | 37 | T>S | No | 1000Genomes | |
| ENSVATH04517189 | 91 | I>V | No | 1000Genomes |
No associated diseases with Q08112
1 regional properties for Q08112
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Ribosomal protein S15/S19, conserved site | 105 - 129 | IPR020934 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosolic ribosome | A ribosome located in the cytosol. |
| cytosolic small ribosomal subunit | The small subunit of a ribosome located in the cytosol. |
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| plant-type vacuole | A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana. |
| plasmodesma | A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
| polysomal ribosome | A ribosome bound to mRNA that forms part of a polysome. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
| structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| ribosomal small subunit assembly | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit. |
| translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q01855 | RPS15 | 40S ribosomal protein S15 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| P62841 | RPS15 | 40S ribosomal protein S15 | Homo sapiens (Human) | PR |
| Q9FIX6 | RPS15E | 40S ribosomal protein S15-5 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FML6 | RPS15F | 40S ribosomal protein S15-6 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FY64 | RPS15D | 40S ribosomal protein S15-4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FY65 | RPS15C | 40S ribosomal protein S15-3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FY66 | RPS15B | 40S ribosomal protein S15-2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MADVEPEVAA | AGVPKKRTFK | KFAFKGVDLD | ALLDMSTDDL | VKLFSSRIRR | RFSRGLTRKP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MALIKKLRKA | KREAPQGEKP | EPVRTHLRNM | IIVPEMIGSI | IGVYNGKTFN | QVEIKPEMIG |
| 130 | 140 | 150 | |||
| HYLAEFSISY | KPVKHGRPGV | GATHSSRFIP | LK |