Q9D0R2
Gene name |
Tars1 (Tars) |
Protein name |
Threonine--tRNA ligase 1, cytoplasmic |
Names |
Threonine--tRNA ligase, cytoplasmic, Threonyl-tRNA synthetase, ThrRS, Threonyl-tRNA synthetase 1 |
Species |
Mus musculus (Mouse) |
KEGG Pathway |
mmu:110960 |
EC number |
6.1.1.3: Ligases forming aminoacyl-tRNA and related compounds |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9D0R2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9D0R2-F1 | Predicted | AlphaFoldDB |
23 variants for Q9D0R2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs3405743579 | 89 | G>V | No | EVA | |
| rs3405321941 | 90 | K>R | No | EVA | |
| rs46399461 | 137 | T>M | No | EVA | |
| rs3389275232 | 222 | K>E | No | EVA | |
| rs3389369315 | 283 | Y>* | No | EVA | |
| rs3405771773 | 286 | G>C | No | EVA | |
| rs3405528141 | 287 | K>N | No | EVA | |
| rs3389350819 | 300 | S>T | No | EVA | |
| rs3389348107 | 305 | K>* | No | EVA | |
| rs3389352290 | 310 | W>R | No | EVA | |
| rs3389305919 | 473 | D>E | No | EVA | |
| rs3389350809 | 473 | D>Y | No | EVA | |
| rs3389325082 | 487 | S>R | No | EVA | |
| rs3389334682 | 501 | P>T | No | EVA | |
| rs3389325117 | 526 | G>D | No | EVA | |
| rs47803216 | 571 | N>S | No | EVA | |
| rs3389315965 | 581 | D>E | No | EVA | |
| rs3389274439 | 615 | L>F | No | EVA | |
| rs3389349801 | 643 | A>V | No | EVA | |
| rs50862471 | 700 | V>L | No | EVA | |
| rs3389325130 | 707 | L>M | No | EVA | |
| rs31584944 | 713 | T>M | No | EVA | |
| rs3389274454 | 716 | K>R | No | EVA |
No associated diseases with Q9D0R2
7 regional properties for Q9D0R2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) | 399 - 607 | IPR002314 |
| domain | TGS | 78 - 142 | IPR004095 |
| domain | Anticodon-binding | 619 - 709 | IPR004154 |
| domain | Aminoacyl-tRNA synthetase, class II | 346 - 612 | IPR006195 |
| domain | Threonyl/alanyl tRNA synthetase, SAD | 248 - 297 | IPR012947 |
| domain | Threonine-tRNA ligase catalytic core domain | 320 - 617 | IPR033728 |
| domain | Threonine-tRNA ligase, class IIa, anticodon-binding domain | 617 - 708 | IPR047246 |
Functions
| Description | ||
|---|---|---|
| EC Number | 6.1.1.3 | Ligases forming aminoacyl-tRNA and related compounds |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| identical protein binding | Binding to an identical protein or proteins. |
| threonine-tRNA ligase activity | Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr). |
| zinc ion binding | Binding to a zinc ion (Zn). |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| threonyl-tRNA aminoacylation | The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. The threonyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a threonine-accetping tRNA. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P07236 | MST1 | Threonine--tRNA ligase, mitochondrial | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| A6QNM8 | TARS3 | Threonine--tRNA ligase 2, cytoplasmic | Bos taurus (Bovine) | PR |
| Q9NYK5 | MRPL39 | 39S ribosomal protein L39, mitochondrial | Homo sapiens (Human) | PR |
| P26639 | TARS1 | Threonine--tRNA ligase 1, cytoplasmic | Homo sapiens (Human) | PR |
| Q3UQ84 | Tars2 | Threonine--tRNA ligase, mitochondrial | Mus musculus (Mouse) | PR |
| Q9JKF7 | Mrpl39 | 39S ribosomal protein L39, mitochondrial | Mus musculus (Mouse) | PR |
| Q68FW7 | Tars2 | Threonine--tRNA ligase, mitochondrial | Rattus norvegicus (Rat) | PR |
| Q8GZ45 | At1g17960 | Probable threonine--tRNA ligase, cytoplasmic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSQEKASSPS | GKMDGEKPVD | ASEEKRKEGG | KKKSKDGGGD | GGRAELNPWP | EYINTRLDMY |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NKLKAEHDSI | LAEKAAKDSK | PIKVTLPDGK | QVDAESWKTT | PYQIACGISQ | GLADNTVVAK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VNKVVWDLDR | PLETDCTLEL | LKFEDEEAQA | VYWHSSAHIM | GEAMERVYGG | CLCYGPPIEN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GFYYDMYLEE | GGVSSNDFSS | LETLCKKIIK | EKQTFERLEV | KKETLLEMFK | YNKFKCRILN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EKVNTPTTTV | YRCGPLIDLC | RGPHVRHTGK | IKTLKIHKNS | STYWEGKADM | ETLQRIYGIS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FPDPKLLKEW | EKFQEEAKNR | DHRKIGRDQE | LYFFHELSPG | SCFFLPKGAY | IYNTLMEFIR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SEYRKRGFQE | VVTPNIFNSR | LWMTSGHWQH | YSENMFSFEV | EKEQFALKPM | NCPGHCLMFD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| HRPRSWRELP | LRLADFGVLH | RNELSGALTG | LTRVRRFQQD | DAHIFCAMEQ | IEDEIKGCLD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| FLRTVYSVFG | FSFKLNLSTR | PEKFLGDIEI | WNQAEKQLEN | SLNEFGEKWE | LNPGDGAFYG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PKIDIQIKDA | IGRYHQCATI | QLDFQLPIRF | NLTYVSHDGD | DKKRPVIVHR | AILGSVERMI |
| 610 | 620 | 630 | 640 | 650 | 660 |
| AILTENYGGK | WPFWLSPRQV | MVVPVGPTCD | EYAQKVRQQF | HDAKFMADTD | LDPGCTLNKK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| IRNAQLAQYN | FILVVGEKEK | ASGTVNIRTR | DNKVHGERTV | EETVRRLQQL | KQTRSKQAEE |
| EF |