Q8NEX9
Gene name |
SDR9C7 (RDHS, SDRO) |
Protein name |
Short-chain dehydrogenase/reductase family 9C member 7 |
Names |
Orphan short-chain dehydrogenase/reductase, SDR-O, RDH-S |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:121214 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8NEX9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8NEX9-F1 | Predicted | AlphaFoldDB |
267 variants for Q8NEX9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA385387303 RCV000782399 rs764593071 CA6638263 |
38 | G>R | Congenital ichthyosis of skin [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
COSM1705825 rs530109812 RCV000495852 VAR_079292 CA6638230 |
72 | R>W | Ichthyosis, congenital, autosomal recessive 13 Variant assessed as Somatic; 0.0 impact. skin ARCI13; decreased protein abundance [ClinVar, NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA385385524 RCV000782400 rs538068583 |
119 | E>K | Variant assessed as Somatic; 0.0 impact. Congenital ichthyosis of skin [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA dbSNP gnomAD |
|
RCV001008179 rs760309815 RCV000624722 |
122 | T>missing | Ichthyosis, congenital, autosomal recessive 13 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000995866 CA6638140 RCV001092490 rs138435128 |
184 | D>G | Ichthyosis, congenital, autosomal recessive 13 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA6638108 RCV000495845 VAR_079293 RCV001805113 rs770729222 |
200 | I>T | Ichthyosis, congenital, autosomal recessive 13 ARCI13; decreased protein abundance [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV002269290 RCV000578258 rs774363396 CA6638094 RCV000782401 |
220 | R>* | Ichthyosis, congenital, autosomal recessive 13 Variant assessed as Somatic; 0.0 impact. Congenital ichthyosis of skin [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000521184 rs749359344 |
1 | M>V | No |
ClinVar dbSNP |
|
|
rs777876093 CA6638284 COSM1512580 |
2 | A>V | lung central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs748081726 CA6638282 |
3 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs368713011 CA237708585 |
6 | D>N | No |
ClinGen ESP |
|
|
CA6638281 rs781197553 |
6 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1370306208 CA385387490 |
10 | M>T | No |
ClinGen TOPMed |
|
|
rs1381002955 CA385387481 |
11 | Y>C | No |
ClinGen TOPMed |
|
|
rs754821182 CA6638280 |
12 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6638279 rs751354444 |
12 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385387455 rs1270819661 |
15 | K>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 15 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385387447 rs1160189138 |
16 | N>D | No |
ClinGen gnomAD |
|
|
rs1480242619 CA385387435 |
17 | C>F | No |
ClinGen gnomAD |
|
|
rs749953357 CA6638276 |
18 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385387430 rs1379792462 |
18 | N>Y | No |
ClinGen gnomAD |
|
|
CA6638274 rs761238535 |
19 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA6638275 rs74397593 |
19 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6638271 rs759915727 |
20 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA6638272 rs759915727 |
20 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA385387409 rs1239232922 |
22 | N>S | No |
ClinGen gnomAD |
|
|
CA6638269 rs771098164 |
23 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs763212533 CA6638268 |
26 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA385387368 rs1565614481 |
28 | V>G | No |
ClinGen Ensembl |
|
|
rs778481010 CA6638266 |
28 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385387370 rs778481010 |
28 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 30 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1333465593 CA385387348 |
31 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs748169493 CA6638265 |
32 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385387340 rs748169493 |
32 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385387292 CA6638260 rs534622617 |
39 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201364501 CA6638258 |
42 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1445213817 CA385387273 |
43 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs373371562 CA6638256 CA6638257 |
44 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768042533 CA6638254 |
47 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs760003577 CA385387244 |
48 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385387242 rs751917282 |
48 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751917282 CA6638252 |
48 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638253 rs760003577 |
48 | R>W | Variant assessed as Somatic; 9.24e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6638250 rs763148682 |
49 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA6638251 rs766751529 |
49 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA6638247 rs375516495 |
50 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA237708379 rs563149219 |
51 | Q>R | No |
ClinGen Ensembl |
|
| TCGA novel | 55 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385387183 rs1314607391 |
58 | T>A | No |
ClinGen TOPMed |
|
|
CA6638243 rs776823460 |
58 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1565614423 CA385387178 |
59 | E>K | No |
ClinGen Ensembl |
|
|
CA6638241 rs147708476 |
61 | G>E | No |
ClinGen ESP ExAC TOPMed |
|
|
CA6638242 rs768766586 |
61 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs771905869 CA6638239 |
62 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA6638237 rs778560599 |
63 | Q>R | No |
ClinGen ExAC |
|
|
rs145462718 CA6638235 |
66 | Q>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs145462718 CA6638236 |
66 | Q>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA385387130 rs1239426791 |
66 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs140482532 CA6638233 |
67 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6638234 rs371673072 |
67 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 68 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1472616136 CA385387120 |
68 | D>G | No |
ClinGen TOPMed |
|
|
rs752099380 CA6638232 |
68 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA385387116 rs1592425172 |
69 | T>P | No |
ClinGen Ensembl |
|
|
rs1182661898 CA385387108 |
70 | S>A | No |
ClinGen TOPMed |
|
| TCGA novel | 70 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6638231 rs766726173 |
71 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs61743538 CA6638229 |
72 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762106608 CA6638227 |
74 | Q>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 75 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6638226 rs776913468 |
77 | L>P | No |
ClinGen ExAC |
|
|
rs1245683003 CA385387058 |
79 | D>A | No |
ClinGen gnomAD |
|
|
CA6638224 rs760606036 |
81 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs754632093 CA6638222 |
84 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 85 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1398536281 CA385387016 |
85 | S>N | No |
ClinGen gnomAD |
|
|
rs774100146 CA385386993 |
88 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774100146 CA6638220 |
88 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374434836 CA6638218 |
89 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747549702 CA385386984 |
90 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638216 rs755650924 |
90 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747549702 CA6638215 |
90 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385386956 rs1355703574 |
94 | R>K | No |
ClinGen TOPMed |
|
|
CA6638214 rs780631575 |
95 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1357966684 CA385386919 |
99 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA237708149 rs374817950 |
99 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
rs1178066197 CA385385809 |
102 | L>P | No |
ClinGen TOPMed |
|
|
CA385385782 rs1441151450 |
103 | W>* | No |
ClinGen TOPMed |
|
|
rs1048980159 CA237705813 |
105 | L>Q | No |
ClinGen gnomAD |
|
|
rs923496708 CA237705811 |
106 | V>L | No |
ClinGen TOPMed |
|
|
CA385385666 rs1192222106 |
109 | A>V | No |
ClinGen gnomAD |
|
|
CA385385657 rs751502183 |
110 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638185 rs751502183 |
110 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1262802313 CA385385571 |
116 | G>C | No |
ClinGen gnomAD |
|
|
rs772840562 CA6638182 |
118 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs373685313 CA6638180 |
118 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6638181 rs769523649 |
118 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA6638178 rs538068583 |
119 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs779585292 CA6638175 |
124 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs910306940 CA237705739 |
124 | D>V | No |
ClinGen gnomAD |
|
|
rs771526305 CA6638174 |
127 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs749712425 CA6638173 |
128 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1592423738 CA385385336 |
129 | V>G | No |
ClinGen Ensembl |
|
|
rs946880924 CA237705720 |
129 | V>L | No |
ClinGen gnomAD |
|
|
CA6638172 rs199715704 |
132 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385385294 rs1176198408 |
132 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs574035876 CA6638171 |
133 | N>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6638170 rs140873692 |
135 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781408150 CA6638169 |
136 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs751586470 CA6638168 |
138 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638166 rs142269600 COSM941825 |
139 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6638165 rs142269600 |
139 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6638163 rs764939633 |
140 | V>M | No |
ClinGen ExAC |
|
|
CA385385150 rs1483863827 |
142 | L>V | No |
ClinGen TOPMed |
|
|
CA385385114 rs1196767570 |
144 | M>V | No |
ClinGen TOPMed |
|
|
CA237705662 rs749089108 |
146 | P>R | No |
ClinGen Ensembl |
|
|
CA237705652 rs543021962 |
147 | M>L | No |
ClinGen Ensembl |
|
|
rs1267565144 CA385385062 |
147 | M>T | No |
ClinGen TOPMed |
|
|
rs1306813030 CA385385039 |
148 | V>G | No |
ClinGen gnomAD |
|
|
CA6638162 rs761606498 |
148 | V>I | No |
ClinGen ExAC |
|
|
rs148703770 CA6638161 |
150 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6638159 rs760293144 |
152 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1177726 rs763791573 CA6638160 |
152 | R>W | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6638158 CA385384879 rs146031860 |
158 | M>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1449966163 CA385384885 |
158 | M>T | No |
ClinGen gnomAD |
|
|
CA385384798 rs1461084571 |
163 | G>A | No |
ClinGen gnomAD |
|
|
rs771616365 CA6638157 |
164 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638156 rs749798308 |
164 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1592423640 CA385384739 |
167 | V>G | No |
ClinGen Ensembl |
|
|
rs200612676 CA6638153 |
167 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6638151 rs755149984 |
168 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147751323 CA6638152 |
168 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA237705555 rs369016536 |
169 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA237705575 rs758421301 |
169 | G>C | No |
ClinGen Ensembl |
|
|
CA6638150 rs369016536 |
169 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139321947 CA237705538 |
173 | C>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs750335193 CA6638147 |
174 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs142957654 CA6638148 |
174 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA385384607 rs1368578664 |
176 | K>R | No |
ClinGen gnomAD |
|
|
rs757025547 CA6638145 |
177 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA237705487 rs200344172 |
179 | V>A | No |
ClinGen ExAC |
|
|
rs200344172 CA6638142 |
179 | V>D | No |
ClinGen ExAC |
|
|
rs373500587 CA6638143 |
179 | V>I | Variant assessed as Somatic; 4.624e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA385384532 rs1490405392 |
181 | A>T | No |
ClinGen TOPMed |
|
|
rs767129286 CA6638139 |
185 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs759018981 CA6638138 |
186 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs773605193 CA6638137 |
187 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs150520393 COSM431545 CA6638116 |
188 | R>C | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA6638115 rs141626978 COSM1363187 |
188 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA385384208 rs150520393 |
188 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs745975241 CA6638112 |
189 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs772298217 CA6638113 |
189 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs973252468 CA237704836 |
190 | L>I | No |
ClinGen Ensembl |
|
|
rs770834103 CA6638110 |
191 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
CA6638109 rs749230976 |
192 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA385384069 rs1267743089 |
193 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1267582676 CA385384081 |
193 | F>S | No |
ClinGen TOPMed |
|
|
CA385384062 rs1204380225 |
194 | G>R | No |
ClinGen gnomAD |
|
|
rs1463242168 CA385384008 |
197 | V>F | No |
ClinGen gnomAD |
|
|
rs1269697560 CA385383994 |
198 | C>Y | No |
ClinGen gnomAD |
|
|
CA385383979 rs1208791510 |
199 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1280812585 CA385383953 |
201 | E>K | No |
ClinGen gnomAD |
|
|
rs371558575 CA6638107 |
202 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781018938 CA6638105 |
205 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs201094660 CA6638103 COSM1628734 |
206 | R>Q | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6638104 rs754623598 |
206 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA385383845 rs1592423206 |
207 | T>P | No |
ClinGen Ensembl |
|
|
CA6638102 rs765897532 |
207 | T>R | No |
ClinGen ExAC gnomAD |
|
|
CA6638101 rs762306101 |
208 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761062642 CA6638098 |
211 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775800915 CA6638097 |
212 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA385383696 rs1565613488 |
215 | L>P | No |
ClinGen Ensembl |
|
|
CA237704727 rs1044034643 |
216 | E>Q | No |
ClinGen TOPMed |
|
|
CA6638096 rs760203041 |
218 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA385383638 rs1249676819 |
218 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA385383635 rs1249676819 |
218 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs759791848 CA6638095 |
219 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs77590816 CA385383591 |
220 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs77590816 CA6638093 RCV000962265 |
220 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs975913023 CA237704679 |
221 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 223 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1261765375 CA385383492 |
225 | R>G | No |
ClinGen TOPMed |
|
|
rs957968799 CA237704677 |
225 | R>S | No |
ClinGen gnomAD |
|
|
rs749322568 CA385383465 |
227 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638092 rs749322568 |
227 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA385383442 rs1367726828 |
228 | Q>* | No |
ClinGen gnomAD |
|
|
rs202221198 CA385383432 |
228 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202221198 CA6638090 |
228 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638089 rs376708384 |
230 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs75997315 CA6638087 |
231 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000957084 rs75997315 CA6638086 |
231 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6638088 rs540839114 |
231 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1592423111 CA385383349 |
232 | D>G | No |
ClinGen Ensembl |
|
|
CA6638085 rs779518565 |
232 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs147081896 CA237704646 |
234 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756591404 CA6638081 |
235 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs369602151 CA6638082 |
235 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 236 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1592423090 CA385383252 |
236 | E>A | No |
ClinGen Ensembl |
|
|
CA385383215 RCV002602910 rs267603591 CA237704640 |
237 | D>E | No |
ClinGen ExAC TOPMed gnomAD ClinVar dbSNP |
|
|
rs767923031 CA6638079 |
237 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA6638077 rs139870455 COSM218423 |
240 | R>C | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6638076 COSM941824 rs374904822 |
240 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 241 | I>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 241 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6638075 rs763152473 |
241 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA385381445 rs1230351716 |
244 | D>E | No |
ClinGen gnomAD |
|
|
CA237700977 rs940816135 |
244 | D>G | No |
ClinGen TOPMed |
|
|
rs765402758 CA6638055 |
244 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA385381433 rs1380238872 |
245 | K>E | No |
ClinGen TOPMed |
|
|
CA385381436 rs1380238872 |
245 | K>Q | No |
ClinGen TOPMed |
|
|
CA385381431 rs1352251323 |
245 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 246 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761916213 CA6638054 |
248 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1008644447 CA237700945 |
249 | I>V | No |
ClinGen gnomAD |
|
|
CA385381309 rs1435692213 |
250 | M>I | No |
ClinGen gnomAD |
|
|
CA385381257 rs1325318745 |
252 | V>L | No |
ClinGen gnomAD |
|
|
CA385381240 rs1405544260 |
253 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA385381247 rs1592421073 |
253 | A>T | No |
ClinGen Ensembl |
|
|
CA385381238 rs1405544260 |
253 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA6638052 rs768439011 |
255 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA385381211 rs1156306360 |
255 | P>T | No |
ClinGen gnomAD |
|
|
CA385381180 rs553647130 |
257 | V>I | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs553647130 CA237700923 |
257 | V>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1334482824 CA385381111 |
261 | I>F | No |
ClinGen TOPMed |
|
|
rs775126518 CA6638050 |
261 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1477343967 CA385381072 |
263 | S>N | No |
ClinGen gnomAD |
|
| TCGA novel | 264 | M>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 267 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA385381000 rs1384464587 |
267 | A>P | No |
ClinGen TOPMed |
|
|
CA385380965 rs771774048 |
269 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638048 rs771774048 |
269 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770439255 CA6638046 |
271 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6638044 rs145761047 |
271 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs770439255 CA6638045 |
271 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA237700889 rs894078139 |
274 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs199883998 CA6638043 |
274 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs894078139 CA385380897 |
274 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6638042 rs755404310 |
276 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA6638038 rs201598330 |
278 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs571332351 CA6638040 |
278 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1176880272 CA385380770 |
282 | D>Y | No |
ClinGen TOPMed |
|
|
rs1237692044 CA385380746 |
283 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1318049018 CA385380716 |
285 | L>F | No |
ClinGen gnomAD |
|
|
rs149786670 CA6638035 |
289 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764142253 CA6638034 |
290 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1413242062 CA385380610 |
292 | K>M | No |
ClinGen gnomAD |
|
| TCGA novel | 292 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375973190 CA6638033 |
293 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1427914612 CA385380602 |
293 | L>M | No |
ClinGen gnomAD |
|
|
rs1475325722 CA385380578 |
294 | P>L | No |
ClinGen gnomAD |
|
|
CA385380566 rs1246589029 |
295 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA237700873 rs796367780 |
296 | P>S | No |
ClinGen Ensembl |
|
|
rs775425272 CA6638032 |
297 | V>L | No |
ClinGen ExAC |
|
| TCGA novel | 300 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1377055131 CA385380495 |
300 | F>L | No |
ClinGen TOPMed |
|
|
rs770527469 CA6638028 |
301 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs748866869 CA6638027 |
301 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA6638029 rs770527469 |
301 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA6638024 rs537510334 |
304 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA6638025 rs146537621 |
304 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA385380369 rs1264718602 |
308 | R>K | No |
ClinGen TOPMed |
|
|
rs747465880 CA6638023 |
310 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1481039777 CA385380304 |
312 | S>I | No |
ClinGen TOPMed |
|
|
rs779318732 CA6638019 |
314 | V>E | No |
ClinGen ExAC gnomAD |
No associated diseases with Q8NEX9
No regional properties for Q8NEX9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q8NEX9 | |||
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| NAD-retinol dehydrogenase activity | Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+. |
| oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
| steroid dehydrogenase activity | Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| retinol metabolic process | The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A. |
| steroid metabolic process | The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q02337 | BDH1 | D-beta-hydroxybutyrate dehydrogenase, mitochondrial | Bos taurus (Bovine) | PR |
| O75452 | RDH16 | Retinol dehydrogenase 16 | Homo sapiens (Human) | PR |
| P80365 | HSD11B2 | 11-beta-hydroxysteroid dehydrogenase type 2 | Homo sapiens (Human) | PR |
| Q02338 | BDH1 | D-beta-hydroxybutyrate dehydrogenase, mitochondrial | Homo sapiens (Human) | PR |
| Q9R092 | Hsd17b6 | 17-beta-hydroxysteroid dehydrogenase type 6 | Mus musculus (Mouse) | PR |
| P50233 | Hsd11b2 | 11-beta-hydroxysteroid dehydrogenase type 2 | Rattus norvegicus (Rat) | PR |
| O54753 | Hsd17b6 | 17-beta-hydroxysteroid dehydrogenase type 6 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAALTDLSFM | YRWFKNCNLV | GNLSEKYVFI | TGCDSGFGNL | LAKQLVDRGM | QVLAACFTEE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GSQKLQRDTS | YRLQTTLLDV | TKSESIKAAA | QWVRDKVGEQ | GLWALVNNAG | VGLPSGPNEW |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LTKDDFVKVI | NVNLVGLIEV | TLHMLPMVKR | ARGRVVNMSS | SGGRVAVIGG | GYCVSKFGVE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AFSDSIRREL | YYFGVKVCII | EPGNYRTAIL | GKENLESRMR | KLWERLPQET | RDSYGEDYFR |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IYTDKLKNIM | QVAEPRVRDV | INSMEHAIVS | RSPRIRYNPG | LDAKLLYIPL | AKLPTPVTDF |
| 310 | |||||
| ILSRYLPRPA | DSV |