Q86SQ4
Gene name |
ADGRG6 |
Protein name |
Adhesion G-protein coupled receptor G6 |
Names |
Developmentally regulated G-protein-coupled receptor, G-protein coupled receptor 126, Vascular inducible G protein-coupled receptor |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57211 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q86SQ4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q86SQ4-F1 | Predicted | AlphaFoldDB |
946 variants for Q86SQ4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA200210 RCV000172977 rs749355583 RCV000186598 |
7 | R>* | Lethal congenital contracture syndrome 9 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP |
|
RCV002537602 rs145672534 CA4026564 RCV000906980 |
29 | M>V | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA4026607 rs202040079 RCV002540054 RCV000885707 |
68 | M>V | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000900017 RCV002537527 CA4026888 rs144911800 |
451 | V>I | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000172978 rs793888524 RCV000186599 |
716 | Q>missing | Lethal congenital contracture syndrome 9 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_075146 | 741 | V>E | LCCS9; decreases the autoprocessing/cleavage of the receptor [UniProt] | Yes | UniProt |
|
VAR_075147 rs793888525 CA200214 RCV000172979 RCV000186600 |
769 | V>E | Lethal congenital contracture syndrome 9 LCCS9 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001330603 rs1443422483 |
824 | A>P | Lethal congenital contracture syndrome 9 [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4027411 VAR_054129 rs1262686 RCV000987796 |
1127 | Q>R | Lethal congenital contracture syndrome 9 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA365885749 rs1295445199 |
2 | M>I | No |
ClinGen gnomAD |
|
|
rs750859843 CA149605671 |
2 | M>V | No |
ClinGen Ensembl |
|
|
CA4026552 rs756333358 |
4 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4026553 rs777999553 |
4 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA149605672 rs1036848836 |
5 | S>P | No |
ClinGen TOPMed |
|
|
CA4026554 rs749355583 |
7 | R>G | No |
ClinGen ExAC |
|
|
CA365885776 rs1317407930 |
7 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs770972022 CA365885788 |
9 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026556 rs774281988 |
9 | W>L | No |
ClinGen ExAC gnomAD |
|
|
rs770972022 CA4026555 |
9 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288909399 COSM281462 CA365885798 COSM281461 |
10 | S>N | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1288909399 CA365885799 |
10 | S>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 11 | C>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1245605905 CA365885816 |
12 | H>L | No |
ClinGen gnomAD |
|
|
rs1217873370 CA365885813 |
12 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs577919450 CA4026557 |
13 | W>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1284570979 CA365885832 |
14 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1386676000 CA365885837 |
15 | W>* | No |
ClinGen gnomAD |
|
|
CA4026558 rs771990833 |
15 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA365885852 rs1488263634 |
17 | P>A | No |
ClinGen gnomAD |
|
|
CA4026559 rs775304054 |
18 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365885872 rs1331329842 |
20 | L>F | No |
ClinGen TOPMed |
|
|
CA4026561 rs763677717 |
21 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402884135 CA365885887 |
22 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA365885897 rs1432847085 |
24 | F>V | No |
ClinGen TOPMed |
|
|
CA365885898 rs1319142083 |
24 | F>Y | No |
ClinGen gnomAD |
|
|
CA4026563 rs776307996 |
27 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA365885917 rs1453463322 |
27 | Y>H | No |
ClinGen gnomAD |
|
|
CA365885924 rs1409048319 |
28 | I>V | No |
ClinGen TOPMed |
|
|
CA4026565 rs764783693 |
29 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA365885951 rs1279614443 |
32 | P>S | No |
ClinGen Ensembl |
|
|
rs749943489 CA4026566 |
33 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 37 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753176909 CA4026590 |
38 | C>F | No |
ClinGen ExAC gnomAD |
|
|
rs750259708 CA4026591 |
38 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1405418885 CA365819467 |
40 | N>K | No |
ClinGen gnomAD |
|
|
rs367816376 CA4026592 |
40 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367816376 CA365819464 |
40 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365819477 rs1303297825 |
42 | R>* | No |
ClinGen gnomAD |
|
|
CA365819478 rs1300899858 |
42 | R>Q | No |
ClinGen gnomAD |
|
|
rs1329334973 CA365819486 |
43 | V>G | No |
ClinGen gnomAD |
|
|
rs1251433786 CA365819487 |
44 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs529155878 CA4026594 |
45 | L>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 47 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201862423 CA4026596 |
47 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758433134 CA4026597 |
48 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA4026598 rs374848824 |
51 | T>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA148992762 rs927292104 |
53 | T>A | No |
ClinGen TOPMed |
|
|
CA365819552 rs1433165473 |
54 | S>Y | No |
ClinGen gnomAD |
|
|
CA148992766 rs1052713376 |
55 | P>L | No |
ClinGen Ensembl |
|
|
rs781112000 CA4026601 |
56 | C>W | No |
ClinGen ExAC gnomAD |
|
|
rs1206729331 CA365819569 |
57 | Y>C | No |
ClinGen TOPMed |
|
|
rs1206729331 CA365819568 |
57 | Y>S | No |
ClinGen TOPMed |
|
|
rs138992283 CA4026603 |
60 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs138992283 CA4026604 |
60 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1366491144 CA365819605 |
62 | P>R | No |
ClinGen gnomAD |
|
|
CA365819608 rs1295107216 |
63 | N>D | No |
ClinGen gnomAD |
|
|
rs762553859 CA4026605 |
64 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026608 rs116955726 RCV000965737 |
70 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA365819673 rs1446447300 |
72 | R>* | No |
ClinGen Ensembl |
|
|
CA4026610 rs192254609 |
72 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs375234396 CA4026612 |
75 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365819695 rs1488416802 |
76 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA148992799 rs373562749 |
76 | G>V | No |
ClinGen ESP |
|
|
CA365819702 rs1583044721 |
77 | Y>C | No |
ClinGen Ensembl |
|
|
rs1368051106 CA365819700 |
77 | Y>D | No |
ClinGen TOPMed |
|
|
rs1562342070 CA365819708 |
78 | I>V | No |
ClinGen Ensembl |
|
|
CA4026614 rs758486246 |
80 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026615 rs766540867 |
80 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA148992808 rs1018382501 |
81 | I>K | No |
ClinGen TOPMed |
|
|
rs1386056389 CA365819727 |
81 | I>V | No |
ClinGen gnomAD |
|
|
CA365819750 rs751587735 |
84 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026616 rs751587735 |
84 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375452464 CA365819753 |
85 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375452464 CA4026618 |
85 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1289364755 CA365819757 |
85 | D>V | No |
ClinGen gnomAD |
|
|
CA4026619 rs748002231 |
88 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1353834463 CA365819798 |
91 | A>S | No |
ClinGen TOPMed |
|
|
CA4026620 rs755936718 |
91 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs368529000 CA148992834 |
93 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA4026621 rs368529000 |
93 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA365819816 rs1383005996 |
94 | C>R | No |
ClinGen gnomAD |
|
|
rs1229710316 CA365819825 |
95 | I>F | No |
ClinGen gnomAD |
|
|
COSM1208625 rs1310941664 CA365819829 COSM1208626 |
95 | I>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs749003590 CA4026622 |
98 | S>L | No |
ClinGen ExAC |
|
|
CA4026623 rs770700301 |
100 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4026624 rs773950881 |
103 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA365819896 rs1227695535 |
105 | E>D | No |
ClinGen TOPMed |
|
| TCGA novel | 105 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365819901 rs1208158143 |
106 | S>N | No |
ClinGen gnomAD |
|
|
rs1295824380 CA365819916 |
108 | T>S | No |
ClinGen TOPMed |
|
|
rs769227436 CA4026626 |
108 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs762170852 CA4026628 |
115 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA365819965 rs1423028941 |
115 | A>V | No |
ClinGen gnomAD |
|
|
CA365819966 rs1385096920 |
116 | K>Q | No |
ClinGen TOPMed |
|
|
CA4026631 rs370872563 |
122 | S>L | No |
ClinGen ESP ExAC gnomAD |
|
|
VAR_054128 CA4026632 rs17280293 |
123 | S>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4026633 rs751711883 |
123 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA365820021 rs377682546 |
124 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA148992880 rs377682546 |
124 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1073942 rs377682546 CA4026634 COSM1073944 |
124 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1378076040 CA365820038 |
127 | M>L | No |
ClinGen gnomAD |
|
|
CA365820043 rs1392295478 |
127 | M>T | No |
ClinGen gnomAD |
|
|
CA365820049 rs1448794714 |
128 | H>Y | No |
ClinGen TOPMed |
|
|
CA4026636 rs370942737 |
130 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365820065 rs370942737 |
130 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756103287 CA4026637 |
132 | S>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 132 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365820112 rs1200895456 |
137 | I>V | No |
ClinGen TOPMed |
|
|
rs1449438726 CA365820125 |
138 | Q>H | No |
ClinGen TOPMed |
|
| TCGA novel | 138 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026638 rs777776056 |
141 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs749058357 CA4026639 |
143 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs988988423 CA148992896 |
145 | S>N | No |
ClinGen TOPMed |
|
|
CA4026640 rs756981737 |
146 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA148992900 rs917394949 |
146 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs75679810 RCV000956425 CA4026641 |
147 | I>N | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4026655 rs764099016 |
150 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs753707536 CA4026656 COSM244755 COSM244756 |
150 | A>V | prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs778631441 CA4026658 |
151 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374475116 CA4026659 |
152 | S>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA365820238 rs1467464723 |
154 | R>S | No |
ClinGen Ensembl |
|
|
CA148993912 rs960788726 |
156 | Q>R | No |
ClinGen Ensembl |
|
|
CA4026661 rs779607304 |
157 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA4026662 rs746494154 |
158 | V>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 163 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365820310 rs1368389601 |
165 | D>V | No |
ClinGen gnomAD |
|
|
rs778207076 CA4026664 |
167 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA4026666 rs771138805 |
168 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1206540927 CA365820334 |
169 | V>L | No |
ClinGen TOPMed |
|
|
CA4026667 rs372275604 |
171 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA148993924 rs913876991 |
171 | V>I | No |
ClinGen Ensembl |
|
|
rs759740851 CA4026668 |
173 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 174 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 174 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA148993938 rs945366522 |
174 | S>T | No |
ClinGen Ensembl |
|
|
rs1366041784 CA365820389 |
177 | I>M | No |
ClinGen gnomAD |
|
|
rs1249703276 CA365820392 |
178 | P>S | No |
ClinGen TOPMed |
|
|
CA365820415 rs1331753793 |
181 | S>N | No |
ClinGen TOPMed |
|
|
rs1303731363 CA365820423 |
182 | A>V | No |
ClinGen TOPMed |
|
|
rs775759258 CA4026670 |
184 | T>I | No |
ClinGen ExAC gnomAD |
|
|
COSM3381437 CA148993954 COSM3381436 rs551114123 |
185 | L>I | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA4026671 rs551114123 |
185 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4026673 rs753760891 |
191 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs750228405 CA4026676 |
192 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764999436 CA4026675 |
192 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750228405 CA365820487 |
192 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764999436 COSM1545222 COSM1545221 CA365820485 |
192 | V>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs764999436 CA365820484 |
192 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758028626 CA4026677 |
193 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs375861051 RCV000903283 CA4026678 |
194 | H>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs925557550 CA148993997 |
194 | H>R | No |
ClinGen Ensembl |
|
|
rs751093638 CA4026679 |
195 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365820511 rs1404039353 |
196 | D>V | No |
ClinGen gnomAD |
|
|
rs754447651 CA4026680 |
197 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA365820548 rs1437324755 |
201 | A>G | No |
ClinGen gnomAD |
|
| TCGA novel | 201 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365820575 CA365820576 rs1364665962 |
205 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA4026684 rs779181219 |
206 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA365820581 rs779181219 |
206 | N>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 207 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026686 rs772443184 |
210 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4026688 rs747090020 |
211 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1377672054 CA365820623 |
212 | L>F | No |
ClinGen TOPMed |
|
|
rs1245704834 CA365820631 |
214 | S>G | No |
ClinGen gnomAD |
|
|
rs367901179 CA4026690 |
217 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365820669 rs1187834530 |
219 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA365820679 rs1238905164 |
220 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 222 | Y>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026691 rs78544168 |
222 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs765191846 CA4026692 |
223 | F>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 224 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459300720 CA365820729 |
228 | D>G | No |
ClinGen gnomAD |
|
|
rs1439904625 CA365820735 |
229 | S>A | No |
ClinGen TOPMed |
|
|
rs11155242 VAR_024478 CA4026696 |
230 | K>Q | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4026697 rs754502589 |
231 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs536355947 CA4026698 |
232 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 234 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026699 rs752216230 |
236 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 236 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779424381 CA4026701 |
237 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1230159272 CA365820796 |
238 | P>H | No |
ClinGen gnomAD |
|
|
rs933058775 CA148994088 |
240 | K>R | No |
ClinGen Ensembl |
|
|
CA4026702 rs375922102 |
244 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000599462 rs1349317802 |
247 | A>missing | No |
ClinVar dbSNP |
|
|
rs780436526 CA4026704 |
247 | A>S | No |
ClinGen ExAC |
|
|
rs199531526 CA4026705 |
251 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA148994100 rs775838564 |
255 | L>F | No |
ClinGen Ensembl |
|
| TCGA novel | 257 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365820940 rs1228845883 |
258 | N>S | No |
ClinGen TOPMed |
|
|
CA4026706 rs768995447 |
259 | N>D | No |
ClinGen ExAC |
|
|
rs1463199892 CA365820946 |
259 | N>T | No |
ClinGen gnomAD |
|
|
CA4026707 rs527263071 |
260 | S>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1073954 COSM1073956 CA4026708 rs748239263 |
260 | S>Y | Variant assessed as Somatic; 4.646e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA365820955 rs1253026349 |
261 | L>M | No |
ClinGen gnomAD |
|
| TCGA novel | 263 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1180664658 CA365820975 |
264 | I>V | No |
ClinGen gnomAD |
|
|
rs111589388 CA4026710 RCV000438794 |
265 | G>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4026711 rs762744259 |
266 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA365820991 rs1400276832 |
267 | N>Y | No |
ClinGen gnomAD |
|
|
rs1402334623 CA365821014 |
269 | K>N | No |
ClinGen TOPMed |
|
|
CA365821018 rs1338047770 |
270 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA148994110 rs752880235 |
271 | N>D | No |
ClinGen Ensembl |
|
|
rs1467915286 CA365821033 |
272 | Y>C | No |
ClinGen TOPMed |
|
|
rs766107810 CA4026712 |
273 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs778567767 CA148994111 |
273 | E>Q | No |
ClinGen Ensembl |
|
|
rs1005872025 CA148994114 |
274 | T>I | No |
ClinGen Ensembl |
|
| TCGA novel | 276 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026714 rs759222863 |
278 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs763469625 CA148994125 |
281 | I>V | No |
ClinGen gnomAD |
|
|
CA4026715 rs767130740 |
282 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 283 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1471385082 CA365821127 |
287 | G>R | No |
ClinGen TOPMed |
|
|
rs567514249 CA148994141 |
288 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA4026719 rs750883061 |
292 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1245053363 CA365821167 |
293 | L>M | No |
ClinGen TOPMed |
|
|
rs28652795 CA148994153 |
293 | L>W | No |
ClinGen Ensembl |
|
|
CA365821180 rs1484232923 |
295 | S>P | No |
ClinGen gnomAD |
|
|
CA365821189 rs1583049366 |
296 | N>S | No |
ClinGen Ensembl |
|
|
CA4026720 rs374194522 |
300 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1203533003 CA365821219 |
300 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA4026721 rs202077095 |
301 | V>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs202077095 CA365821224 |
301 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4026723 rs755300707 |
302 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs747347676 CA4026722 |
302 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 305 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 305 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs995199955 CA148994175 |
306 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA148994169 rs201497641 |
306 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000972150 rs201497641 CA4026724 |
306 | D>Y | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs537536307 CA4026725 |
307 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4026726 rs769849401 |
309 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777589148 CA4026727 |
311 | R>* | Variant assessed as Somatic; 4.641e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1387308864 CA365821297 |
313 | W>G | No |
ClinGen gnomAD |
|
|
CA365821299 rs1324870034 |
313 | W>S | No |
ClinGen gnomAD |
|
|
CA365821322 rs1232999930 |
316 | T>A | No |
ClinGen gnomAD |
|
|
rs371592836 CA4026730 |
316 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759274172 CA365821326 |
317 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA4026732 rs771651812 |
317 | M>T | No |
ClinGen ExAC |
|
|
CA4026731 rs759274172 |
317 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs775140357 CA4026733 |
320 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs760115531 CA4026734 |
320 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs370177362 CA4026737 |
324 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 325 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026740 rs755355849 |
326 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1158290423 CA365821411 |
329 | V>G | No |
ClinGen TOPMed |
|
|
CA4026741 rs781277784 |
329 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA365821431 rs1168004219 |
332 | N>S | No |
ClinGen gnomAD |
|
|
CA4026742 rs145304917 |
334 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1444136567 CA365821448 |
335 | D>G | No |
ClinGen TOPMed |
|
|
CA148994256 rs373599767 |
335 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA365821469 rs1320671057 |
338 | N>H | No |
ClinGen gnomAD |
|
|
RCV000912613 rs200437948 CA4026744 |
338 | N>I | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA365821475 rs1432451403 |
338 | N>K | No |
ClinGen gnomAD |
|
|
CA4026745 rs749360660 |
342 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA4026746 rs770872495 |
343 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA365821516 rs1247530796 |
344 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA365821514 rs1247530796 |
344 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA365821525 rs1264175851 |
345 | N>I | No |
ClinGen gnomAD |
|
|
CA365821537 rs1334815164 |
347 | A>G | No |
ClinGen gnomAD |
|
|
rs1445427454 CA365821533 |
347 | A>S | No |
ClinGen TOPMed |
|
|
CA4026747 rs778758825 |
350 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365821560 rs1250011003 |
351 | E>A | No |
ClinGen gnomAD |
|
|
rs1463655374 CA365821568 |
352 | S>N | No |
ClinGen gnomAD |
|
|
rs1204392073 CA365821565 |
352 | S>R | No |
ClinGen TOPMed |
|
|
CA4026748 rs745695876 |
353 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA365821577 rs1359879866 |
353 | N>S | No |
ClinGen TOPMed |
|
|
rs757881946 CA148994280 |
354 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA148998591 rs544627788 |
357 | G>V | No |
ClinGen Ensembl |
|
|
CA365821630 rs1191249830 |
359 | Y>* | No |
ClinGen gnomAD |
|
|
CA365821625 rs1489172293 |
359 | Y>H | No |
ClinGen gnomAD |
|
|
CA4026789 rs765342077 |
360 | L>P | No |
ClinGen ExAC gnomAD |
|
|
COSM205457 rs184591267 COSM205456 CA4026790 |
362 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA365821651 rs1162105647 |
363 | L>P | No |
ClinGen TOPMed |
|
|
CA365821654 rs1409812012 |
364 | P>S | No |
ClinGen gnomAD |
|
|
rs1409812012 CA365821655 |
364 | P>T | No |
ClinGen gnomAD |
|
|
CA365821664 rs1166106431 |
365 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1438779345 CA365821670 |
366 | A>E | No |
ClinGen gnomAD |
|
|
rs1366157715 CA365821691 |
370 | S>G | No |
ClinGen gnomAD |
|
|
rs376452752 CA4026792 |
370 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4026793 rs376452752 |
370 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1271653497 CA365821700 |
371 | C>Y | No |
ClinGen gnomAD |
|
|
CA4026794 rs754687714 |
372 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs2143390 CA365821714 |
373 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4026795 rs781011121 |
373 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4026798 rs772921039 |
375 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA365821732 rs1190096786 |
377 | L>F | No |
ClinGen gnomAD |
|
|
rs766100619 CA148998622 |
378 | C>Y | No |
ClinGen Ensembl |
|
|
CA365821749 rs1423145185 |
379 | Q>R | No |
ClinGen gnomAD |
|
|
CA365821786 rs1583068324 |
383 | N>T | No |
ClinGen Ensembl |
|
|
CA4026817 rs748864894 |
384 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1415288283 CA365821793 |
384 | S>P | No |
ClinGen gnomAD |
|
|
CA4026818 rs770300960 |
385 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365821802 rs1412776804 |
386 | S>G | No |
ClinGen gnomAD |
|
|
rs1292567314 CA365821805 |
386 | S>T | No |
ClinGen gnomAD |
|
|
CA365821814 rs1448735357 |
387 | T>I | No |
ClinGen TOPMed |
|
|
CA148999297 rs764286860 |
388 | T>A | No |
ClinGen gnomAD |
|
|
CA365821815 rs764286860 |
388 | T>P | No |
ClinGen gnomAD |
|
|
CA365821828 rs1200693443 |
390 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA365821842 rs1282086803 |
392 | V>A | No |
ClinGen gnomAD |
|
|
CA4026823 rs762107477 |
394 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA4026824 rs770007435 |
395 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs182651892 CA4026825 |
397 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368646880 CA365821909 |
402 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs907754398 CA148999316 |
403 | D>E | No |
ClinGen Ensembl |
|
|
CA4026827 rs370831198 |
403 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4026828 rs375001083 |
405 | Q>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759609818 CA148999346 |
407 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759609818 CA4026829 |
407 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026830 rs767544205 |
407 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs767544205 CA148999350 |
407 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA149002315 rs890307626 |
408 | D>G | No |
ClinGen TOPMed |
|
|
CA4026848 rs375300547 |
411 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4026849 rs760669259 |
412 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1368283370 CA365821987 |
413 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs534089695 CA4026850 |
413 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4026851 rs753663415 |
414 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs756919427 CA4026852 |
415 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA149002339 rs940185359 |
415 | S>P | No |
ClinGen TOPMed |
|
|
CA4026855 rs555414871 |
416 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4026856 rs555414871 |
416 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4026857 rs748701889 |
418 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA149002361 rs756183754 |
419 | Q>H | No |
ClinGen Ensembl |
|
|
rs1322009005 CA365822026 |
420 | N>H | No |
ClinGen gnomAD |
|
| TCGA novel | 420 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1073963 COSM1073961 CA4026858 rs756610632 |
423 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM205461 rs1271357229 CA365822051 COSM205460 |
423 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1271357229 CA365822049 |
423 | R>L | No |
ClinGen gnomAD |
|
|
CA365822050 rs1271357229 COSM3697549 COSM3697548 |
423 | R>P | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA365822082 rs1264202969 |
428 | K>Q | No |
ClinGen gnomAD |
|
|
CA365822084 rs1430045972 |
428 | K>T | No |
ClinGen gnomAD |
|
|
CA4026862 rs201905626 CA4026861 |
432 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4026883 rs376357580 |
438 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4026884 rs775771714 |
442 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365822194 rs1417087919 |
442 | Q>R | No |
ClinGen gnomAD |
|
|
CA365822218 rs1355433914 |
445 | N>S | No |
ClinGen gnomAD |
|
|
rs200152845 CA149003532 |
447 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200152845 CA4026885 |
447 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA365822248 rs1431202715 |
450 | V>I | No |
ClinGen TOPMed |
|
|
rs774026696 CA4026889 |
452 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1176169806 CA365822303 |
456 | H>P | No |
ClinGen gnomAD |
|
|
rs866634377 CA149003965 |
457 | L>M | No |
ClinGen gnomAD |
|
|
CA149003967 rs868800646 |
460 | G>* | No |
ClinGen Ensembl |
|
|
rs370645479 CA4026904 |
460 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1205597755 CA365822334 |
461 | E>G | No |
ClinGen TOPMed |
|
|
rs979834414 CA149003970 |
462 | D>E | No |
ClinGen TOPMed |
|
|
CA365822338 rs1173156447 |
462 | D>N | No |
ClinGen gnomAD |
|
|
CA365822359 rs1250021247 |
464 | I>M | No |
ClinGen Ensembl |
|
|
CA365822362 rs1353310401 |
465 | K>Q | No |
ClinGen gnomAD |
|
|
rs1441507094 CA365822364 |
465 | K>R | No |
ClinGen gnomAD |
|
|
CA149003972 rs866093396 |
469 | S>R | No |
ClinGen Ensembl |
|
|
CA149003971 rs950713147 |
469 | S>T | No |
ClinGen Ensembl |
|
|
CA149003975 rs748766707 |
471 | E>G | No |
ClinGen Ensembl |
|
|
CA4026905 rs781109696 |
472 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 473 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365822428 rs1333979185 |
474 | P>L | No |
ClinGen gnomAD |
|
|
rs1562362514 CA365822432 |
475 | R>T | No |
ClinGen Ensembl |
|
|
CA149009590 rs1046610929 |
476 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs906779118 CA149009595 |
477 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA365822506 rs1420699658 |
485 | N>D | No |
ClinGen gnomAD |
|
|
rs371422324 CA4026923 |
485 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1031577459 CA149009602 |
487 | T>I | No |
ClinGen Ensembl |
|
|
CA365822529 rs1319979035 |
488 | N>K | No |
ClinGen gnomAD |
|
|
CA4026925 rs769734114 |
488 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs777617124 CA4026926 |
489 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA365822538 rs1399242268 |
490 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 490 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365822537 rs1399242268 |
490 | T>P | No |
ClinGen gnomAD |
|
|
rs749109463 CA4026927 |
491 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA365822555 rs989946 CA365822556 |
492 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1283004597 CA365822601 |
496 | I>T | No |
ClinGen Ensembl |
|
|
rs1230883078 CA365822607 |
497 | I>L | No |
ClinGen gnomAD |
|
|
CA365822610 rs1230883078 |
497 | I>V | No |
ClinGen gnomAD |
|
|
rs1283093625 CA365822627 |
498 | Q>R | No |
ClinGen gnomAD |
|
|
CA365822666 rs1165166126 |
501 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA365822698 rs1281786906 |
503 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA365822694 rs1210595968 |
503 | K>R | No |
ClinGen TOPMed |
|
|
CA149009630 rs979463832 |
504 | N>S | No |
ClinGen TOPMed |
|
|
CA4026931 rs372053605 |
506 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs202032349 CA4026933 |
509 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365822786 rs1237575614 |
510 | E>K | No |
ClinGen TOPMed |
|
|
CA149009661 rs369516962 |
513 | R>G | No |
ClinGen ESP gnomAD |
|
|
rs1375659405 CA365822846 |
514 | L>P | No |
ClinGen TOPMed |
|
|
rs911835672 CA149009662 |
515 | H>R | No |
ClinGen Ensembl |
|
|
rs1187232063 CA365822860 |
516 | T>A | No |
ClinGen gnomAD |
|
|
CA365822866 rs1364476061 |
516 | T>I | No |
ClinGen gnomAD |
|
|
rs1166751792 CA365822870 |
517 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs765876265 CA365822903 |
519 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765876265 CA4026934 |
519 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026935 rs773806984 |
521 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1233039040 CA365823364 |
523 | G>A | No |
ClinGen gnomAD |
|
|
rs760512207 CA149011794 |
524 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
CA4026956 rs766781770 |
524 | H>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 526 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774788882 CA4026957 |
527 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 527 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365823394 rs1562367148 |
528 | M>I | No |
ClinGen Ensembl |
|
|
CA4026959 rs199876211 CA4026960 |
528 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199876211 CA4026958 |
528 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763624313 CA149011818 |
529 | E>K | No |
ClinGen Ensembl |
|
|
CA4026961 rs756300996 |
529 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1209311504 CA365823413 |
531 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA365823419 rs1431206863 |
532 | K>Q | No |
ClinGen gnomAD |
|
|
rs1197928981 CA365823421 |
532 | K>R | No |
ClinGen gnomAD |
|
|
rs372666875 CA4026962 |
534 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 535 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs937112675 CA149011824 |
537 | P>L | No |
ClinGen TOPMed |
|
|
rs757203827 CA4026964 |
537 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA365823467 rs1461572120 |
539 | I>L | No |
ClinGen gnomAD |
|
|
rs1461572120 CA365823465 |
539 | I>V | No |
ClinGen gnomAD |
|
|
rs139306565 CA4026966 |
540 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1228908515 CA365823475 |
540 | Q>P | No |
ClinGen TOPMed |
|
|
CA365823500 rs1386516799 |
544 | Y>H | No |
ClinGen gnomAD |
|
|
rs577606842 CA4026968 |
545 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA365823520 rs1278191598 |
547 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA365823519 rs1278191598 |
547 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA365823526 rs1322191772 |
548 | C>R | No |
ClinGen TOPMed |
|
|
CA4026970 rs768417321 |
549 | P>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 551 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1271449369 CA365823555 |
552 | P>S | No |
ClinGen gnomAD |
|
|
rs1488294396 CA365823578 |
555 | S>F | No |
ClinGen gnomAD |
|
|
CA365823580 rs747603208 |
556 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs747603208 CA4026972 |
556 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1262189554 CA365823589 |
557 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 557 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4026975 rs759965270 |
558 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs373346856 CA4026974 |
558 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs544737640 CA4026976 |
559 | I>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA365823636 rs1365231418 |
563 | N>D | No |
ClinGen gnomAD |
|
|
rs777312705 CA4026993 |
563 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs565722297 CA149012688 |
564 | A>T | No |
ClinGen 1000Genomes TOPMed |
|
|
CA4026994 rs746431638 |
565 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365823647 rs746431638 |
565 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4026997 rs760966409 |
569 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs775849911 CA4026996 |
569 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365823700 rs1465724979 |
572 | W>R | No |
ClinGen Ensembl |
|
|
CA4027000 rs191332808 |
575 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA365823763 rs1444546802 |
576 | D>A | No |
ClinGen TOPMed |
|
|
CA365823805 rs1309396809 |
578 | S>F | No |
ClinGen gnomAD |
|
|
CA365823817 rs1315377116 |
579 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs765274988 CA365823861 |
582 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765274988 CA4027001 |
582 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027012 rs369236177 |
584 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs916030251 CA149013085 |
586 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1304520254 CA365823918 |
586 | E>V | No |
ClinGen gnomAD |
|
|
rs780503322 CA4027014 |
587 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4027013 rs780503322 |
587 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1236283424 CA365823925 |
588 | A>T | No |
ClinGen gnomAD |
|
|
CA4027017 rs569714425 |
590 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs569714425 CA4027016 |
590 | Q>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs373975613 CA4027018 |
590 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773177183 CA4027019 |
591 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA149013101 rs909775310 |
593 | N>D | No |
ClinGen TOPMed |
|
|
RCV000998693 rs193295605 CA4027020 |
595 | T>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA365824039 rs1253287453 |
597 | D>H | No |
ClinGen gnomAD |
|
|
RCV000905477 rs146727650 CA4027021 |
597 | D>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA365824130 rs1261939301 |
602 | T>I | No |
ClinGen gnomAD |
|
|
CA365824148 rs1583099020 |
603 | S>L | No |
ClinGen Ensembl |
|
|
CA149013148 rs922433386 |
604 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1172550096 CA365824175 |
606 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1583099070 CA365824191 |
607 | T>A | No |
ClinGen Ensembl |
|
|
rs933854206 CA149013153 |
609 | I>T | No |
ClinGen TOPMed |
|
|
rs1465202971 CA365824249 |
611 | E>Q | No |
ClinGen gnomAD |
|
|
CA365824269 rs1326801231 |
612 | Q>L | No |
ClinGen gnomAD |
|
|
rs1272860439 CA365824310 |
615 | R>K | No |
ClinGen gnomAD |
|
|
CA365824318 rs1366746483 |
615 | R>S | No |
ClinGen gnomAD |
|
|
rs1215072322 CA365824330 |
616 | I>S | No |
ClinGen gnomAD |
|
|
rs755737485 COSM269261 CA4027026 COSM269260 |
617 | V>A | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA365824365 rs1315498506 |
619 | K>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 619 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027028 rs753323388 |
621 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763739669 CA4027027 |
621 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA4027030 rs756707921 |
622 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1361812720 CA365824447 |
623 | I>M | No |
ClinGen gnomAD |
|
|
rs1486432364 CA365824485 |
625 | I>M | No |
ClinGen gnomAD |
|
|
CA4027032 rs755473615 |
625 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1188797700 CA365824500 |
626 | T>I | No |
ClinGen gnomAD |
|
|
rs1188797700 CA365824496 |
626 | T>K | No |
ClinGen gnomAD |
|
|
rs1181118989 CA365824526 |
628 | G>V | No |
ClinGen TOPMed |
|
|
CA4027033 rs781466239 |
629 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs748484928 CA4027034 |
630 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365824582 CA4027035 rs769911718 |
632 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs773442205 CA4027036 |
633 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365824594 rs773442205 |
633 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 635 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 636 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1010553887 CA149013237 |
637 | N>D | No |
ClinGen TOPMed |
|
|
rs771180710 CA4027038 |
637 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365824660 rs771180710 |
637 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1431257905 CA365824673 |
638 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 639 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1289250831 CA365824722 |
641 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA365824745 rs775155415 |
644 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027043 rs760482422 |
645 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs139180983 CA4027044 |
646 | L>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 651 | S>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027045 rs753576309 |
652 | E>K | No |
ClinGen ExAC gnomAD |
|
|
RCV000970147 rs184235213 CA4027063 |
653 | A>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1212218079 CA365824830 |
655 | K>R | No |
ClinGen gnomAD |
|
|
rs1212218079 CA365824829 |
655 | K>T | No |
ClinGen gnomAD |
|
|
CA365824837 rs1375017871 |
656 | T>I | No |
ClinGen TOPMed |
|
|
CA365824872 rs1296821917 |
661 | A>S | No |
ClinGen TOPMed |
|
|
CA365824887 rs1407557752 |
663 | K>T | No |
ClinGen TOPMed |
|
|
CA4027065 rs370043073 |
664 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4027066 rs755243417 |
665 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1471284879 CA365824901 |
665 | D>V | No |
ClinGen gnomAD |
|
|
rs1179169491 CA365824914 |
667 | N>S | No |
ClinGen TOPMed |
|
|
rs530416885 CA4027067 |
668 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1378237396 CA365824942 |
671 | H>L | No |
ClinGen gnomAD |
|
|
CA4027068 rs764809899 |
673 | N>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 674 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365824967 rs1174153407 |
675 | T>A | No |
ClinGen gnomAD |
|
|
rs749938643 CA4027069 |
675 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762409777 CA4027070 |
676 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762409777 CA365824972 |
676 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027072 rs753293070 COSM1073976 COSM1073978 |
677 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs767931887 CA4027071 |
677 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1448511882 CA365824996 |
680 | A>S | No |
ClinGen gnomAD |
|
|
rs756543816 CA4027073 |
680 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA149013830 rs750093131 |
682 | S>G | No |
ClinGen Ensembl |
|
|
CA4027076 CA4027075 rs200367753 |
682 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369110407 CA4027078 |
683 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs747035910 CA4027081 |
686 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA4027082 rs768465531 |
690 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365825062 rs1196980263 |
691 | N>K | No |
ClinGen gnomAD |
|
|
CA4027083 rs776426124 |
692 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365825069 rs1438829907 |
693 | I>V | No |
ClinGen gnomAD |
|
|
rs1194059134 CA365825076 |
694 | S>P | No |
ClinGen gnomAD |
|
|
rs377636467 CA4027084 |
695 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA149013880 rs371186032 |
697 | S>C | No |
ClinGen ESP TOPMed |
|
|
CA149013884 rs145871077 |
697 | S>N | No |
ClinGen 1000Genomes gnomAD |
|
|
CA149013888 rs968010566 |
697 | S>R | No |
ClinGen TOPMed |
|
| TCGA novel | 698 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772801371 CA4027086 |
698 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1405906109 CA365825119 |
700 | L>R | No |
ClinGen TOPMed |
|
|
CA4027087 rs762572365 |
703 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA365825138 rs762572365 |
703 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA365825142 rs1466767157 |
704 | N>D | No |
ClinGen gnomAD |
|
|
rs765949375 CA4027088 |
704 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs552221555 CA4027089 |
705 | E>K | No |
ClinGen 1000Genomes ExAC |
|
|
rs1030798488 CA149013913 |
706 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs956415528 CA149013919 |
707 | Y>H | No |
ClinGen TOPMed |
|
|
CA4027117 rs766447706 |
710 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA365825217 rs1160891192 |
712 | F>L | No |
ClinGen TOPMed |
|
|
CA4027119 rs182585288 |
712 | F>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000659063 CA4027121 rs186651592 |
715 | G>E | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
RCV001199872 rs372427661 CA4027120 |
715 | G>R | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs756037302 CA365825244 |
716 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1184771620 CA365825242 |
716 | Q>R | No |
ClinGen TOPMed |
|
|
CA4027123 rs777599022 |
717 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs748976078 CA365825279 |
722 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs748976078 CA4027124 |
722 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA365825283 rs1378795901 COSM371463 COSM371462 |
723 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
| TCGA novel | 724 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365825288 rs1237753523 |
724 | I>V | No |
ClinGen gnomAD |
|
|
rs890232581 CA149014974 |
729 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA365825340 rs1288423077 |
731 | E>D | No |
ClinGen TOPMed |
|
|
rs376752245 CA4027125 |
735 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA149014979 rs1056483693 |
736 | E>* | No |
ClinGen Ensembl |
|
|
CA365825380 rs1482680511 |
737 | D>G | No |
ClinGen gnomAD |
|
|
CA4027127 rs755952122 |
739 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA10586155 rs1554251481 |
741 | V>D | No |
ClinGen Ensembl |
|
|
rs1239668119 CA365825407 |
742 | R>G | No |
ClinGen gnomAD |
|
|
rs771752914 CA4027128 |
745 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1174650266 CA365825486 |
752 | T>I | No |
ClinGen gnomAD |
|
|
rs765782642 CA4027131 |
753 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA149015017 rs997510180 |
754 | L>V | No |
ClinGen TOPMed |
|
|
rs1032597624 TCGA novel CA149015024 |
755 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed gnomAD |
|
rs757051854 CA4027144 |
757 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757051854 CA365825530 |
757 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1291665252 CA365825547 |
760 | P>S | No |
ClinGen gnomAD |
|
|
CA4027146 rs745573811 |
762 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1583107892 CA365825576 |
764 | T>A | No |
ClinGen Ensembl |
|
|
rs1315592682 CA365825586 |
765 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 765 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365825582 rs1175152439 |
765 | L>V | No |
ClinGen TOPMed |
|
|
CA4027147 rs746820401 |
766 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290197016 CA365825606 |
768 | Y>F | No |
ClinGen gnomAD |
|
|
CA365825613 rs793888525 |
769 | V>G | No |
ClinGen Ensembl |
|
|
CA365825617 rs1219858836 |
770 | M>K | No |
ClinGen gnomAD |
|
|
rs1246600532 CA365825628 COSM1440878 COSM1440879 |
771 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA365825640 rs1195865878 |
773 | S>N | No |
ClinGen gnomAD |
|
|
CA365825649 rs1261116197 |
774 | I>T | No |
ClinGen gnomAD |
|
|
CA365825674 rs1477557930 |
778 | T>A | No |
ClinGen gnomAD |
|
|
rs770457333 CA4027150 |
778 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA365825678 rs1416253318 |
779 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 783 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1583108051 CA365825718 |
784 | D>G | No |
ClinGen Ensembl |
|
|
rs1162436416 CA365825727 |
785 | P>H | No |
ClinGen gnomAD |
|
| TCGA novel | 785 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365825744 rs1364823143 |
788 | I>V | No |
ClinGen gnomAD |
|
|
rs1300033522 CA365825762 |
790 | I>M | No |
ClinGen gnomAD |
|
|
CA4027151 rs773539808 |
790 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs763492059 CA4027152 |
791 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA149016240 rs973703489 |
793 | T>A | No |
ClinGen Ensembl |
|
|
rs866102909 CA149016243 |
793 | T>K | No |
ClinGen Ensembl |
|
|
CA365825794 rs1306456334 |
795 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1306456334 CA365825792 |
795 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA149016256 rs1006468613 |
796 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA149016961 rs1016889712 |
797 | E>D | No |
ClinGen TOPMed |
|
|
rs1445342072 CA365825831 |
799 | H>R | No |
ClinGen gnomAD |
|
|
CA149016963 rs561370149 |
800 | H>R | No |
ClinGen 1000Genomes |
|
|
CA365825844 rs1583110671 |
801 | P>S | No |
ClinGen Ensembl |
|
|
CA365825897 rs1378077219 |
808 | L>P | No |
ClinGen gnomAD |
|
|
CA365825900 rs1257223763 |
809 | N>D | No |
ClinGen TOPMed |
|
|
CA4027163 rs750179017 |
810 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1342934500 CA365825945 |
813 | S>G | No |
ClinGen gnomAD |
|
|
CA365825956 rs1449730489 |
814 | F>S | No |
ClinGen gnomAD |
|
|
rs990274098 CA149017573 |
815 | G>E | No |
ClinGen Ensembl |
|
|
rs1223008188 CA365825965 |
816 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1258909944 CA365825992 |
819 | T>M | No |
ClinGen gnomAD |
|
|
rs1443422483 CA365826022 |
824 | A>T | No |
ClinGen TOPMed |
|
|
CA4027182 rs765159105 |
825 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1199459200 CA365826038 |
826 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1248403307 CA365826053 |
828 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA365826054 rs1248403307 |
828 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA365826065 rs1283974813 |
830 | A>P | No |
ClinGen TOPMed |
|
|
CA4027183 rs750276998 |
831 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs138824051 CA4027185 |
833 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs138824051 CA4027184 |
833 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA365826171 rs370822329 |
838 | N>K | No |
ClinGen gnomAD |
|
|
CA365826198 rs1210998591 |
840 | F>Y | No |
ClinGen TOPMed |
|
|
CA4027187 rs754669806 |
845 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027186 rs751295041 |
845 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747636352 CA4027189 |
847 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1486333543 CA365826405 |
848 | D>N | No |
ClinGen gnomAD |
|
|
rs1424044476 CA365826420 |
850 | P>A | No |
ClinGen gnomAD |
|
|
rs1424044476 CA365826421 |
850 | P>S | No |
ClinGen gnomAD |
|
|
rs1189264006 CA365826425 |
851 | R>G | No |
ClinGen gnomAD |
|
|
CA365826443 rs752178726 |
853 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365826440 rs1582655662 |
853 | A>T | No |
ClinGen Ensembl |
|
|
rs752178726 CA4027207 |
853 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201172357 CA4027208 |
854 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 854 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1164105083 CA365826454 |
855 | Q>L | No |
ClinGen TOPMed |
|
|
CA365826455 rs1164105083 |
855 | Q>R | No |
ClinGen TOPMed |
|
|
CA149019641 rs1010105993 |
857 | D>V | No |
ClinGen Ensembl |
|
|
rs1363035100 CA365826476 |
858 | A>G | No |
ClinGen gnomAD |
|
|
rs1393359499 CA365826494 |
861 | T>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 861 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027209 rs374199043 |
861 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA149019651 rs902620936 |
862 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA149019652 rs1032359171 |
869 | Y>C | No |
ClinGen gnomAD |
|
|
CA365826549 rs1032359171 |
869 | Y>S | No |
ClinGen gnomAD |
|
|
CA4027213 rs372702669 |
870 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4027212 rs780411310 |
870 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748299525 CA4027216 |
876 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1219777561 CA365826595 |
876 | A>V | No |
ClinGen TOPMed |
|
|
CA365826598 rs1320167877 |
877 | I>L | No |
ClinGen TOPMed |
|
|
CA365826597 rs1320167877 |
877 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 879 | S>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769954057 CA4027217 |
881 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365826629 rs1368611271 |
882 | T>A | No |
ClinGen TOPMed |
|
|
rs1240945456 CA365826633 |
882 | T>I | No |
ClinGen gnomAD |
|
|
CA4027218 rs773418459 |
883 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA4027220 rs202116919 |
886 | Y>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA149019682 rs938403456 |
887 | V>A | No |
ClinGen TOPMed |
|
|
CA365826697 rs1344389991 |
890 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 891 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027238 rs749312742 |
893 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1204304460 CA365826716 |
893 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs771023445 CA4027239 |
894 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1393439022 CA365826730 |
895 | D>E | No |
ClinGen TOPMed |
|
|
rs1489763113 CA365826743 |
897 | P>L | No |
ClinGen gnomAD |
|
|
CA365826764 rs550663402 |
900 | I>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs984318446 CA149020021 |
900 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 901 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775136868 CA4027243 |
902 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs771971212 CA4027242 |
902 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs760388656 CA4027244 |
903 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA365826832 rs753380361 |
911 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs753380361 CA4027246 |
911 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA365826829 rs1453525736 |
911 | L>V | No |
ClinGen TOPMed |
|
|
CA365826837 rs1350309349 |
912 | N>S | No |
ClinGen gnomAD |
|
|
rs1457435945 CA365826841 |
913 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1457435945 CA365826842 |
913 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA365826850 rs1582657380 |
914 | L>P | No |
ClinGen Ensembl |
|
|
rs761268701 CA4027247 |
914 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA365826871 rs1364381811 |
918 | D>N | No |
ClinGen gnomAD |
|
|
rs764707015 CA4027248 |
919 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1562379093 CA365826883 |
919 | G>V | No |
ClinGen Ensembl |
|
|
CA4027249 rs752150834 |
920 | W>G | No |
ClinGen ExAC gnomAD |
|
|
rs755432845 CA4027250 |
922 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA365826901 rs1359436499 |
922 | T>P | No |
ClinGen gnomAD |
|
|
rs1015633298 CA149020095 |
925 | N>S | No |
ClinGen gnomAD |
|
|
rs781662099 CA4027251 |
925 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4027252 RCV000960147 rs186655757 |
929 | L>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA365826957 rs1349631812 |
931 | I>L | No |
ClinGen TOPMed |
|
| TCGA novel | 932 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756405743 CA4027253 |
933 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs756405743 CA365826970 |
933 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs373686565 CA4027254 |
934 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373686565 CA365826979 |
934 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 936 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1414208701 CA365826990 |
936 | L>R | No |
ClinGen gnomAD |
|
|
CA149020104 rs933450271 |
937 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1334940145 CA365827019 |
940 | F>L | No |
ClinGen TOPMed |
|
|
CA365827025 rs1416193689 |
941 | L>P | No |
ClinGen TOPMed |
|
|
CA4027255 rs749400993 |
944 | T>A | Variant assessed as Somatic; 0.0001856 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs867552430 CA149020114 |
945 | F>I | No |
ClinGen Ensembl |
|
|
CA149020118 rs535577075 |
947 | W>* | No |
ClinGen Ensembl |
|
|
CA4027257 rs778826685 |
947 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs745876758 CA4027258 |
952 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 953 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 954 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 954 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA149020127 rs746751442 |
955 | M>I | No |
ClinGen Ensembl |
|
|
rs551719878 CA4027259 |
955 | M>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM1073982 COSM1073984 rs1303109223 CA365827122 |
956 | Y>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
| TCGA novel | 957 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027261 rs369946839 |
958 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365827152 rs761427700 |
961 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4027264 rs761427700 |
961 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs889317406 CA149020149 |
965 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs764791367 CA4027265 |
965 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4027266 rs772581036 |
967 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA4027267 rs760098162 |
968 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs760098162 CA365827197 |
968 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA4027268 rs767841904 |
968 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753135960 CA365827200 |
969 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4027269 rs753135960 |
969 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027270 rs373361637 |
969 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1160299259 CA365827207 |
970 | Y>C | No |
ClinGen gnomAD |
|
|
CA4027272 rs754152632 |
971 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375811355 CA4027273 |
974 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365827235 rs1407889065 |
974 | F>S | No |
ClinGen gnomAD |
|
|
CA365827256 rs1378195394 |
977 | I>T | No |
ClinGen gnomAD |
|
|
rs1222364508 CA365827274 |
980 | G>S | No |
ClinGen TOPMed |
|
|
rs1489614516 CA365827305 |
983 | A>T | No |
ClinGen gnomAD |
|
|
CA365827310 rs1283798977 |
983 | A>V | No |
ClinGen TOPMed |
|
|
rs770386496 CA4027304 |
984 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1319963533 CA365827343 |
989 | V>F | No |
ClinGen TOPMed |
|
|
rs200450467 CA4027306 |
991 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762220868 CA4027309 |
996 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs765615712 CA4027310 |
996 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365827396 rs1298903151 |
997 | E>* | No |
ClinGen gnomAD |
|
|
CA4027312 rs763235586 |
997 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1298903151 CA365827394 |
997 | E>K | No |
ClinGen gnomAD |
|
|
CA365827410 rs1337573549 |
999 | Y>S | No |
ClinGen gnomAD |
|
|
rs1180910727 CA365827425 |
1001 | K>R | No |
ClinGen TOPMed |
|
|
CA365827449 rs1325584367 |
1004 | Y>C | No |
ClinGen gnomAD |
|
|
rs1316989665 CA365827457 |
1005 | G>A | No |
ClinGen gnomAD |
|
|
CA4027314 rs553890241 |
1007 | E>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4027315 rs754912058 |
1009 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754912058 CA149021007 |
1009 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365827500 rs1582660200 |
1011 | E>D | No |
ClinGen Ensembl |
|
|
rs1260638094 CA365827502 |
1012 | F>I | No |
ClinGen gnomAD |
|
|
rs13216256 CA149022858 |
1013 | C>W | No |
ClinGen Ensembl |
|
|
CA365827529 rs1174600832 |
1014 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
rs570636337 CA4027337 |
1014 | W>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1174600832 CA365827530 |
1014 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
rs752670221 CA4027338 |
1016 | Q>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1017 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365827560 rs1330722548 |
1018 | P>T | No |
ClinGen TOPMed |
|
| TCGA novel | 1019 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027339 rs756074536 |
1019 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA4027341 rs753603038 |
1020 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371643501 CA4027340 |
1020 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA365827575 rs1380605822 |
1021 | F>I | No |
ClinGen TOPMed |
|
|
CA4027343 rs756890815 |
1022 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs756890815 CA365827586 |
1022 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA4027342 rs756890815 |
1022 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs1345671863 CA365827593 |
1023 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1451014592 CA365827597 |
1024 | T>S | No |
ClinGen TOPMed |
|
|
rs779127355 CA4027344 |
1025 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA365827611 rs1562382394 |
1026 | A>D | No |
ClinGen Ensembl |
|
|
rs758025977 CA4027345 |
1027 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA365827617 rs1205663918 |
1027 | G>V | No |
ClinGen gnomAD |
|
|
CA365827624 rs1321250958 |
1028 | Y>C | No |
ClinGen TOPMed |
|
|
CA149022927 rs1055364258 |
1030 | G>V | No |
ClinGen TOPMed |
|
|
rs966238318 CA149022932 |
1032 | M>I | No |
ClinGen Ensembl |
|
|
CA365827649 rs1226725753 |
1032 | M>K | No |
ClinGen gnomAD |
|
|
CA365827655 rs1298424629 |
1033 | F>L | No |
ClinGen gnomAD |
|
|
rs1195794370 CA365827657 |
1033 | F>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 1035 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1197479022 CA365827673 |
1035 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 1035 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365827671 rs1481488063 |
1035 | L>V | No |
ClinGen gnomAD |
|
|
rs770281091 CA4027349 |
1036 | N>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA149022947 rs200483338 |
1037 | I>V | No |
ClinGen Ensembl |
|
|
CA4027351 rs749621051 |
1039 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027350 rs188834899 |
1039 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1460403619 CA365827707 |
1040 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4027352 rs771162689 |
1040 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs994535418 CA149022958 |
1041 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1459880373 CA365827716 |
1042 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 1044 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1232814758 CA365827730 |
1044 | M>T | No |
ClinGen gnomAD |
|
|
CA4027353 rs774602364 |
1045 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA365827746 rs1582664662 |
1046 | Q>H | No |
ClinGen Ensembl |
|
| TCGA novel | 1046 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA365827753 rs1483805631 |
1047 | I>M | No |
ClinGen gnomAD |
|
|
CA4027354 rs759721796 |
1047 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1242022456 CA365827776 |
1051 | N>D | No |
ClinGen TOPMed |
|
|
rs922679826 CA149022976 |
1053 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs767649565 CA4027355 |
1053 | K>N | No |
ClinGen ExAC TOPMed |
|
|
rs760542668 CA4027357 |
1056 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027356 rs775625580 |
1056 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027359 rs199568634 |
1057 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1440880 RCV000762437 COSM1440881 VAR_076965 rs536714306 CA4027360 |
1057 | R>Q | large_intestine found in patients with aggressive periodontitis; impairs cAMP production; abrogates osteoblastic differentiation [Cosmic, UniProt] | No |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs199568634 CA4027358 |
1057 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs555114028 CA4027361 |
1058 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4027364 rs576641911 |
1060 | R>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1390316108 CA365827831 |
1060 | R>I | No |
ClinGen gnomAD |
|
|
CA365827834 rs1288503357 |
1061 | E>K | No |
ClinGen TOPMed |
|
|
CA4027365 CA4027366 rs557716413 |
1063 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4027367 rs557716413 |
1063 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365827866 rs1165186381 |
1065 | R>S | No |
ClinGen TOPMed |
|
|
rs771324253 CA4027369 |
1066 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA4027368 rs749733597 |
1066 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs905366167 CA149023134 |
1067 | L>M | No |
ClinGen gnomAD |
|
|
rs905366167 CA365827873 |
1067 | L>V | No |
ClinGen gnomAD |
|
|
CA149023140 COSM266610 rs977070350 COSM266609 |
1068 | R>C | large_intestine Variant assessed as Somatic; 4.64e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1425955493 CA365827881 COSM205468 COSM205469 |
1068 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA4027370 rs774692267 |
1070 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA365827890 rs1188707850 |
1070 | V>M | No |
ClinGen TOPMed |
|
|
CA4027371 rs746146861 |
1074 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1429772250 CA365827923 |
1075 | F>V | No |
ClinGen TOPMed |
|
|
rs772223725 CA4027372 |
1076 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1360240630 CA365827943 |
1078 | G>D | No |
ClinGen gnomAD |
|
|
rs775464498 CA4027373 |
1079 | M>I | No |
ClinGen ExAC |
|
|
CA365827959 rs1258979156 |
1080 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 1083 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1028890755 CA149023167 |
1085 | F>S | No |
ClinGen TOPMed |
|
|
CA365828014 rs1488577022 |
1088 | W>S | No |
ClinGen TOPMed |
|
|
rs1316297085 CA365828022 |
1089 | G>E | No |
ClinGen gnomAD |
|
|
rs1562382762 CA365828030 |
1090 | P>L | No |
ClinGen Ensembl |
|
|
rs374836373 CA4027375 |
1093 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4027376 rs776672043 |
1094 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1394225464 CA365828059 |
1095 | F>V | No |
ClinGen gnomAD |
|
|
rs1218189916 CA365828068 |
1096 | M>T | No |
ClinGen gnomAD |
|
|
CA149023190 rs892207709 |
1096 | M>V | No |
ClinGen Ensembl |
|
| TCGA novel | 1098 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027378 rs765184344 |
1103 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1104 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773168657 CA4027398 |
1109 | F>C | No |
ClinGen ExAC TOPMed |
|
|
rs758910549 CA149003874 |
1110 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA4027400 rs369521129 |
1112 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369521129 CA4027399 |
1112 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4027401 TCGA novel rs751261668 |
1113 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs759105248 CA365822671 |
1114 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs759105248 CA4027402 |
1114 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs757765789 CA4027405 |
1117 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA4027404 rs752144888 |
1117 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1277824188 CA365822746 |
1119 | E>* | No |
ClinGen gnomAD |
|
|
CA365822752 rs1350025024 |
1119 | E>G | No |
ClinGen gnomAD |
|
|
rs953160908 CA149003905 |
1121 | V>I | No |
ClinGen TOPMed |
|
|
CA365822812 rs1285447010 |
1123 | K>N | No |
ClinGen gnomAD |
|
|
CA4027406 rs779344190 |
1123 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4027408 rs758839563 |
1126 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA4027407 rs750908671 |
1126 | R>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1127 | Q>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027410 rs747316312 |
1127 | Q>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA149003922 rs747316312 |
1127 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365822856 rs747316312 |
1127 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1262686 CA365822863 |
1127 | Q>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4027412 rs1262686 |
1127 | Q>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA365822873 rs1582694544 |
1128 | H>D | No |
ClinGen Ensembl |
|
|
CA4027413 rs541981396 |
1128 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1035960358 CA149003943 |
1131 | C>Y | No |
ClinGen Ensembl |
|
|
rs769871493 CA4027414 |
1132 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244320772 CA365822928 |
1132 | G>S | No |
ClinGen TOPMed |
|
|
CA4027415 rs773328318 |
1133 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1133 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027417 rs375435005 |
1135 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4027416 rs762950556 |
1135 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA365822974 rs1278112193 |
1137 | A>T | No |
ClinGen TOPMed |
|
|
CA4027419 rs751539485 |
1140 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA365823017 rs1487144869 |
1141 | D>G | No |
ClinGen TOPMed |
|
|
rs995615546 CA149004256 |
1142 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1208813594 CA365823026 |
1142 | W>C | No |
ClinGen gnomAD |
|
|
rs995615546 CA365823024 |
1142 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
rs770715586 CA4027439 |
1148 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs866419808 CA149004257 |
1149 | I>F | No |
ClinGen Ensembl |
|
|
CA4027440 rs369753921 |
1150 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1582695805 CA365823088 |
1151 | K>N | No |
ClinGen Ensembl |
|
|
rs1264235433 CA365823100 |
1153 | S>N | No |
ClinGen TOPMed |
|
|
CA4027442 rs373115050 |
1154 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1156 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027443 rs775164521 |
1160 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA4027444 rs760318247 |
1161 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1325308741 CA365823161 |
1162 | S>F | No |
ClinGen gnomAD |
|
|
rs763654162 CA4027446 |
1163 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs776064384 CA365823179 |
1165 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA4027447 rs776064384 |
1165 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4027450 rs751981267 |
1167 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1368848974 CA365823189 |
1167 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1368848974 CA365823187 |
1167 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA4027451 rs755343005 |
1169 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs1050418260 CA149004288 |
1170 | S>* | No |
ClinGen Ensembl |
|
|
CA4027452 rs369549773 |
1171 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756389285 CA4027454 |
1172 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1173 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778010981 CA4027455 |
1174 | T>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1177 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1177 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA149004324 rs1019110280 |
1177 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA365823258 rs1267885534 |
1178 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs548532834 CA365823260 |
1179 | S>A | No |
ClinGen TOPMed |
|
|
rs548532834 CA149004327 |
1179 | S>P | No |
ClinGen TOPMed |
|
|
rs757248124 CA4027457 |
1180 | S>N | No |
ClinGen ExAC |
|
|
CA365823288 rs1476625756 |
1183 | T>S | No |
ClinGen TOPMed |
|
| TCGA novel | 1187 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1185900307 CA365823319 |
1187 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs897989114 CA149004332 |
1188 | N>D | No |
ClinGen Ensembl |
|
|
rs1254688623 CA365823325 |
1188 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA149004344 rs993290712 |
1189 | S>R | No |
ClinGen Ensembl |
|
|
rs200899578 CA4027459 |
1192 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1375759577 CA365823726 |
1194 | V>A | No |
ClinGen gnomAD |
|
|
rs375463968 CA4027476 |
1194 | V>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA149005481 rs779220737 |
1196 | Y>C | No |
ClinGen Ensembl |
|
|
rs199726782 CA4027477 |
1196 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs748297713 CA4027478 |
1197 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA365823757 rs1203161730 |
1197 | E>D | No |
ClinGen TOPMed |
|
|
CA365823753 rs748297713 |
1197 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1407456579 CA365823845 |
1204 | G>E | No |
ClinGen gnomAD |
|
|
rs1407456579 CA365823848 |
1204 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 1205 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027479 rs574157602 |
1206 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA149005491 rs963739661 |
1207 | R>G | No |
ClinGen Ensembl |
|
|
CA365823955 rs1367265511 |
1208 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA365823959 rs1290599448 |
1208 | Q>R | No |
ClinGen gnomAD |
|
|
rs936617218 CA149006468 |
1209 | C>F | No |
ClinGen Ensembl |
|
|
rs771635843 CA149006479 |
1211 | H>R | No |
ClinGen Ensembl |
|
|
rs1295675840 CA365824004 |
1211 | H>Y | No |
ClinGen TOPMed |
|
|
CA149006499 rs1053617641 COSM740785 |
1213 | Q>* | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs758365152 CA4027495 |
1214 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs750452978 CA4027494 |
1214 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1228365849 CA365824058 |
1215 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 1215 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4027496 rs188113052 RCV000891483 |
1216 | V>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1051993848 CA149006508 |
1217 | K>T | No |
ClinGen TOPMed |
|
|
rs754811944 CA4027498 |
1218 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA365824118 rs1219575956 |
1219 | G>C | No |
ClinGen gnomAD |
|
|
CA365824119 rs1162906544 |
1219 | G>D | No |
ClinGen TOPMed |
|
|
CA365824133 rs1265089080 |
1220 | P>T | No |
ClinGen gnomAD |
|
|
rs1449811878 CA365824179 |
1222 | C>C | No |
ClinGen TOPMed |
1 associated diseases with Q86SQ4
[MIM: 616503]: Lethal congenital contracture syndrome 9 (LCCS9)
A form of lethal congenital contracture syndrome, an autosomal recessive disorder characterized by degeneration of anterior horn neurons, extreme skeletal muscle atrophy and congenital non-progressive joint contractures. The contractures can involve the upper or lower limbs and/or the vertebral column, leading to various degrees of flexion or extension limitations evident at birth. {ECO:0000269|PubMed:26004201}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of lethal congenital contracture syndrome, an autosomal recessive disorder characterized by degeneration of anterior horn neurons, extreme skeletal muscle atrophy and congenital non-progressive joint contractures. The contractures can involve the upper or lower limbs and/or the vertebral column, leading to various degrees of flexion or extension limitations evident at birth. {ECO:0000269|PubMed:26004201}. Note=The disease is caused by variants affecting the gene represented in this entry.
1 regional properties for Q86SQ4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Aminoacyl-tRNA synthetase, class I, conserved site | 46 - 56 | IPR001412 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell surface | The external part of the cell wall and/or plasma membrane. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| collagen binding | Binding to collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). |
| endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain. |
| extracellular matrix binding | Binding to a component of the extracellular matrix. |
| G protein-coupled receptor activity | Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex. |
| laminin binding | Binding to a laminin, a major glycoprotein constituent of the basement membrane of cells. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| adenylate cyclase-activating G protein-coupled receptor signaling pathway | A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of adenylyl cyclase activity and a subsequent increase in the intracellular concentration of cyclic AMP (cAMP). |
| cAMP-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via cyclic AMP (cAMP). Includes production of cAMP, and downstream effectors that further transmit the signal within the cell. |
| cell surface receptor signaling pathway | The series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. |
| G protein-coupled receptor signaling pathway | The series of molecular signals initiated by a ligand binding to its receptor, in which the activated receptor promotes the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, and ends with regulation of a downstream cellular process. The pathway can start from the plasma membrane, Golgi or nuclear membrane. |
| heart trabecula formation | The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod. |
| myelination | The process in which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. |
| myelination in peripheral nervous system | The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier. |
| nervous system development | The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. |
| Schwann cell differentiation | The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O97148 | mth | G-protein coupled receptor Mth | Drosophila melanogaster (Fruit fly) | PR |
| Q9VSE7 | mthl7 | Probable G-protein coupled receptor Mth-like 7 | Drosophila melanogaster (Fruit fly) | PR |
| P83119 | mthl12 | Probable G-protein coupled receptor Mth-like 12 | Drosophila melanogaster (Fruit fly) | PR |
| Q8IZF3 | ADGRF4 | Adhesion G protein-coupled receptor F4 | Homo sapiens (Human) | PR |
| Q9UHX3 | ADGRE2 | Adhesion G protein-coupled receptor E2 | Homo sapiens (Human) | PR |
| O60242 | ADGRB3 | Adhesion G protein-coupled receptor B3 | Homo sapiens (Human) | PR |
| Q80TR1 | Adgrl1 | Adhesion G protein-coupled receptor L1 | Mus musculus (Mouse) | PR |
| Q2Q426 | ADGRE2 | Adhesion G protein-coupled receptor E2 | Macaca mulatta (Rhesus macaque) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMFRSDRMWS | CHWKWKPSPL | LFLFALYIMC | VPHSVWGCAN | CRVVLSNPSG | TFTSPCYPND |
| 70 | 80 | 90 | 100 | 110 | 120 |
| YPNSQACMWT | LRAPTGYIIQ | ITFNDFDIEE | APNCIYDSLS | LDNGESQTKF | CGATAKGLSF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NSSANEMHVS | FSSDFSIQKK | GFNASYIRVA | VSLRNQKVIL | PQTSDAYQVS | VAKSISIPEL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SAFTLCFEAT | KVGHEDSDWT | AFSYSNASFT | QLLSFGKAKS | GYFLSISDSK | CLLNNALPVK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EKEDIFAESF | EQLCLVWNNS | LGSIGVNFKR | NYETVPCDST | ISKVIPGNGK | LLLGSNQNEI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VSLKGDIYNF | RLWNFTMNAK | ILSNLSCNVK | GNVVDWQNDF | WNIPNLALKA | ESNLSCGSYL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| IPLPAAELAS | CADLGTLCQA | TVNSPSTTPP | TVTTNMPVTN | RIDKQRNDGI | IYRISVVIQN |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ILRHPEVKVQ | SKVAEWLNST | FQNWNYTVYV | VNISFHLSAG | EDKIKVKRSL | EDEPRLVLWA |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LLVYNATNNT | NLEGKIIQQK | LLKNNESLDE | GLRLHTVNVR | QLGHCLAMEE | PKGYYWPSIQ |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PSEYVLPCPD | KPGFSASRIC | FYNATNPLVT | YWGPVDISNC | LKEANEVANQ | ILNLTADGQN |
| 610 | 620 | 630 | 640 | 650 | 660 |
| LTSANITNIV | EQVKRIVNKE | ENIDITLGST | LMNIFSNILS | SSDSDLLESS | SEALKTIDEL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| AFKIDLNSTS | HVNITTRNLA | LSVSSLLPGT | NAISNFSIGL | PSNNESYFQM | DFESGQVDPL |
| 730 | 740 | 750 | 760 | 770 | 780 |
| ASVILPPNLL | ENLSPEDSVL | VRRAQFTFFN | KTGLFQDVGP | QRKTLVSYVM | ACSIGNITIQ |
| 790 | 800 | 810 | 820 | 830 | 840 |
| NLKDPVQIKI | KHTRTQEVHH | PICAFWDLNK | NKSFGGWNTS | GCVAHRDSDA | SETVCLCNHF |
| 850 | 860 | 870 | 880 | 890 | 900 |
| THFGVLMDLP | RSASQLDARN | TKVLTFISYI | GCGISAIFSA | ATLLTYVAFE | KLRRDYPSKI |
| 910 | 920 | 930 | 940 | 950 | 960 |
| LMNLSTALLF | LNLLFLLDGW | ITSFNVDGLC | IAVAVLLHFF | LLATFTWMGL | EAIHMYIALV |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| KVFNTYIRRY | ILKFCIIGWG | LPALVVSVVL | ASRNNNEVYG | KESYGKEKGD | EFCWIQDPVI |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| FYVTCAGYFG | VMFFLNIAMF | IVVMVQICGR | NGKRSNRTLR | EEVLRNLRSV | VSLTFLLGMT |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| WGFAFFAWGP | LNIPFMYLFS | IFNSLQGLFI | FIFHCAMKEN | VQKQWRQHLC | CGRFRLADNS |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| DWSKTATNII | KKSSDNLGKS | LSSSSIGSNS | TYLTSKSKSS | STTYFKRNSH | TDNVSYEHSF |
| 1210 | 1220 | ||||
| NKSGSLRQCF | HGQVLVKTGP | C |