Q6NVL5
Gene name |
elp3 |
Protein name |
Elongator complex protein 3 |
Names |
tRNA uridine(34) acetyltransferase |
Species |
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) |
KEGG Pathway |
xtr:407885 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q6NVL5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q6NVL5-F1 | Predicted | AlphaFoldDB |
No variants for Q6NVL5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q6NVL5 | |||||
No associated diseases with Q6NVL5
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| elongator holoenzyme complex | A heterohexameric protein complex composed two discrete heterotrimeric subcomplexes that is involved in modification of wobble nucleosides in tRNA. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| 4 iron, 4 sulfur cluster binding | Binding to a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
| metal ion binding | Binding to a metal ion. |
| phosphorylase kinase regulator activity | Modulation of the activity of the enzyme phosphorylase kinase. |
| tRNA binding | Binding to a transfer RNA. |
| tRNA uridine(34) acetyltransferase activity | Catalysis of the reaction: acetyl-CoA + H2O + S-adenosyl-L-methionine + uridine(34) in tRNA = 5'-deoxyadenosine + carboxymethyluridine(34) in tRNA + CoA + 2 H(+) + L-methionine. |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| negative regulation of protein ubiquitination | Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of ubiquitin groups to a protein. |
| neural crest cell migration | The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo. |
| protein stabilization | Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation | The process whereby a wobble base uridine residue in a tRNA is modified to 5-methoxycarbonylmethyl-2-thiouridine. |
| tRNA wobble uridine modification | The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q02908 | ELP3 | Elongator complex protein 3 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q2KJ61 | ELP3 | Elongator complex protein 3 | Bos taurus (Bovine) | PR |
| Q5ZHS1 | ELP3 | Elongator complex protein 3 | Gallus gallus (Chicken) | PR |
| Q9H9T3 | ELP3 | Elongator complex protein 3 | Homo sapiens (Human) | PR |
| Q9CZX0 | Elp3 | Elongator complex protein 3 | Mus musculus (Mouse) | PR |
| Q7X7L3 | ELP3 | Elongator complex protein 3 | Oryza sativa subsp japonica (Rice) | PR |
| Q93ZR1 | HAG3 | Elongator complex protein 3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q5RIC0 | elp3 | Elongator complex protein 3 | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKPDRGPRGK | QSQAELMMMT | VADVIKQLVE | AHEQGKDVNL | NKLKTKTSAK | YGLSAQPRLV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DIIAAVPPQY | RKILVPKLKA | KPIRTASGIA | VVAVMCKPHR | CPHINFTGNI | CVYCPGGPDS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DFEYSTQSYT | GYEPTSMRAI | RARYDPYLQT | RHRVEQLKQL | GHSVDKVEFI | VMGGTFMALS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EDYRDFFIRN | LHDALSGHTS | NSVSEAVRYS | ERSNTKCVGI | TIETRPDYCL | KRHLSDMLSY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GCTRLEIGVQ | SVYEDVARDT | NRGHTVKAVC | ESFHMAKDAG | FKVVSHMMPD | LPNVGLERDT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EQFIEFFENP | AFRPDGMKLY | PTLVIRGTGL | YELWKTGRYR | SYSPSTLVDL | VARILALVPP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| WTRVYRVQRD | IPMPLVSSGV | EHGNLRELAL | ARMKDLGTEC | RDVRTREVGI | QEIHHKVRPY |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QVELIRRDYV | ANGGWETFLS | YEDPEQDILI | GLLRLRKCSE | QSFRPELKGG | VSIVRELHVY |
| 490 | 500 | 510 | 520 | 530 | 540 |
| GSVVPISSRD | PSKFQHQGFG | MLLMEEAERI | AREEHGSCKI | AVISGVGTRN | YYRKLGYELE |
| GPYMVKKLD |