Q28HT6
Gene name |
vps26a (TGas130e20.1) |
Protein name |
Vacuolar protein sorting-associated protein 26A |
Names |
Vesicle protein sorting 26A |
Species |
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) |
KEGG Pathway |
xtr:549925 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q28HT6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q28HT6-F1 | Predicted | AlphaFoldDB |
No variants for Q28HT6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q28HT6 | |||||
No associated diseases with Q28HT6
No regional properties for Q28HT6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q28HT6 | |||
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| early endosome | A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways. |
| endosome | A vacuole to which materials ingested by endocytosis are delivered. |
| endosome membrane | The lipid bilayer surrounding an endosome. |
| retromer complex | A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35. |
| vesicle | Any small, fluid-filled, spherical organelle enclosed by membrane. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
| retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q0VD53 | VPS26A | Vacuolar protein sorting-associated protein 26A | Bos taurus (Bovine) | PR |
| Q4G0F5 | VPS26B | Vacuolar protein sorting-associated protein 26B | Homo sapiens (Human) | PR |
| O75436 | VPS26A | Vacuolar protein sorting-associated protein 26A | Homo sapiens (Human) | PR |
| Q8C0E2 | Vps26b | Vacuolar protein sorting-associated protein 26B | Mus musculus (Mouse) | PR |
| P40336 | Vps26a | Vacuolar protein sorting-associated protein 26A | Mus musculus (Mouse) | PR |
| Q6AY86 | Vps26a | Vacuolar protein sorting-associated protein 26A | Rattus norvegicus (Rat) | PR |
| O01258 | vps-26 | Vacuolar protein sorting-associated protein 26 | Caenorhabditis elegans | PR |
| Q5BKM4 | vps26b | Vacuolar protein sorting-associated protein 26B | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| Q6DH23 | vps26bl | Vacuolar protein sorting-associated protein 26B-like | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| Q6TNP8 | vps26a | Vacuolar protein sorting-associated protein 26A | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSFLSGFFGP | ICEIEVVLND | ADTRKVSEIK | TEEGKVEKHF | LFYDGESVAG | KVNIVFRQPG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KRLEHQGIRI | EFVGQIELFN | DKSNTHEFVN | LVKELALPGE | LTQSRNYDFE | FMQVEKPYES |
| 130 | 140 | 150 | 160 | 170 | 180 |
| YIGANVRLRY | FLKVTIVRRL | TDLVKEYDLI | VHQLATYPDV | NNSIKMEVGI | EDCLHIEFEY |
| 190 | 200 | 210 | 220 | 230 | 240 |
| NKSKYHLKDV | IVGKIYFLLV | RIKIQHMELQ | LIKKEITGIG | PSTTTETETV | AKYEIMDGAP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VKGESIPIRL | FLAGYDPTPT | MRDVNKKFSV | RYFLNLVLVD | EEDRRYFKQQ | EIILWRKAPE |
| 310 | 320 | ||||
| KIRKRTNFHQ | RFEPQEPQAS | AEEPEI |