Q16394
Gene name |
EXT1 |
Protein name |
Exostosin-1 |
Names |
Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase, Multiple exostoses protein 1, Putative tumor suppressor protein EXT1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:2131 |
EC number |
2.4.1.225: Hexosyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
753 variants for Q16394
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001038425 RCV003152746 rs1817895168 |
2 | Q>* | Multiple congenital exostosis Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817893887 RCV001062963 |
16 | C>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817893321 RCV001235105 |
20 | L>F | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs764093488 RCV001218625 |
22 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002290596 rs1817893036 RCV001092146 RCV001253631 |
24 | G>* | Multiple congenital exostosis Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817893036 RCV001317028 |
24 | G>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4854431 rs765050783 RCV001067428 |
25 | G>D | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001218914 rs1817892723 |
27 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_012815 | 27 | Q>K | EXT1; no loss of activity [UniProt] | Yes | UniProt |
|
RCV000704322 rs1563659821 |
35 | S>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000821360 rs1586280235 |
38 | E>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001214528 RCV001008115 rs1586280217 |
39 | E>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001223750 rs1817891356 |
39 | E>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001205167 RCV000120870 CA159089 RCV001356540 rs199862937 |
41 | S>N | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001205071 rs1817890492 |
44 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000268096 rs772811741 CA4854410 RCV002058697 |
50 | S>G | Multiple congenital exostosis Hereditary Multiple Osteochondromatosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000791243 CA371916457 rs1586280132 |
55 | W>* | Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001058439 rs1817889027 |
59 | P>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001337881 rs187891947 CA4854401 |
63 | R>L | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001293877 rs1242925512 |
66 | V>A | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817887343 RCV001055562 |
70 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4854395 rs150818931 RCV000822823 |
72 | E>K | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1554601568 RCV000630811 |
73 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554601559 RCV001214827 RCV002509632 RCV000598686 RCV001225072 |
83 | R>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817885411 RCV001051975 |
89 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1586279952 RCV000809663 |
93 | Y>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371916215 rs1227875610 RCV000630816 |
93 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1563659649 RCV000688480 |
95 | G>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817884791 RCV001038953 |
96 | K>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001204281 rs1817884837 |
96 | K>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817884143 RCV001323877 |
106 | F>L | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4854376 rs750116273 RCV001344379 |
113 | G>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA4854375 rs146127753 RCV001349512 |
115 | K>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001057241 rs982804750 |
117 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002468956 RCV000002605 rs119103289 CA252312 |
119 | Y>* | Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1817882619 RCV001237679 |
121 | Q>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000800416 rs1586279835 CA371916015 |
122 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001218830 rs1817881036 |
134 | I>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817880635 RCV001065943 |
141 | S>F | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001262404 rs1188458258 CA371915873 |
143 | F>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000579269 rs1554601534 CA371915806 RCV001382617 |
152 | C>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001348233 rs1817879832 |
153 | L>P | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817879250 RCV001203274 |
163 | R>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001054847 RCV002469332 rs1817879125 |
164 | D>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_012816 | 164 | D>H | EXT1; loss of activity [UniProt] | Yes | UniProt |
|
RCV001308665 rs1227559201 |
167 | S>P | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817878703 RCV001062230 |
173 | N>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000585681 rs1554601526 |
173 | N>* | Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817878624 RCV001161575 |
173 | N>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs587776540 RCV000002603 |
177 | K>missing | Chondrosarcoma [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554601525 RCV000630805 |
179 | Q>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA10588453 RCV000255895 rs886039561 RCV001859483 |
179 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000686140 rs1563659474 |
181 | L>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000254961 RCV002494802 RCV000538727 rs886039486 |
181 | L>missing | Multiple congenital exostosis Chondrosarcoma [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371915566 RCV001346735 rs775696069 |
188 | R>K | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1817877271 RCV001197122 |
188 | R>S | Chondrosarcoma [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817877229 RCV001231974 |
189 | N>KY | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817877188 RCV001222709 |
190 | H>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000685852 CA371915543 rs1563659467 |
191 | L>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001222710 rs1817877044 |
192 | I>N | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000798252 CA371915512 rs1586279621 |
195 | L>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1817876363 RCV001202505 |
198 | G>V | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001342155 rs1817876310 |
199 | T>A | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817876148 RCV001315728 |
200 | W>C | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000553496 rs1554601502 |
200 | W>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817876107 RCV001320381 |
203 | Y>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1586279544 RCV000796238 |
215 | M>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1586279535 RCV000816812 |
215 | M>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_012817 | 215 | M>del | EXT1 [UniProt] | Yes | UniProt |
|
RCV001234049 rs1817874249 |
217 | A>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000630810 rs1554601504 |
218 | K>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554601507 RCV000630803 |
218 | K>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001239862 rs1817873963 |
218 | K>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001868152 RCV000622308 rs1554601506 CA371915346 |
220 | S>G | Multiple congenital exostosis Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1817873681 RCV001228250 |
225 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817873582 RCV001205362 |
227 | R>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817873443 RCV001238798 |
229 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001060530 rs1817873196 |
231 | D>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001223208 rs1817872999 |
233 | S>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001049881 rs1817872132 |
250 | F>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1436385815 RCV001161574 CA371915120 |
253 | F>L | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001226699 rs1817871592 |
257 | P>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001208454 rs1817871338 |
260 | R>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000690444 rs1563659352 |
266 | F>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs886039352 RCV001859476 RCV000255528 CA10588451 |
268 | G>E | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001857953 RCV000520277 rs1554601492 CA371915018 RCV001066050 |
268 | G>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001246271 rs1817870176 |
273 | T>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1817870237 RCV001244194 |
274 | G>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554601483 CA371914946 RCV000630813 VAR_002370 |
280 | R>G | Multiple congenital exostosis EXT1; loss of activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000699208 VAR_002371 RCV003126909 CA371914941 rs1563659325 |
280 | R>S | Multiple congenital exostosis EXT1; loss of activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA371914943 RCV000819148 rs1586279403 |
280 | R>T | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1554601481 RCV000630814 |
283 | L>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA16605945 RCV000800945 rs1057520608 RCV000440581 |
284 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000692334 rs1554601476 RCV000482528 |
285 | H>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001225381 rs759708614 |
290 | E>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA184682407 RCV001293878 RCV002543022 rs372750330 |
291 | D>E | Multiple congenital exostosis Chondrosarcoma [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA371914861 RCV000798952 rs1586279359 |
292 | V>F | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1817868656 RCV001061059 |
297 | T>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001233740 rs1817868370 |
304 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001069596 CA371914771 RCV000578854 rs1554601474 |
305 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1817867776 RCV001039947 |
312 | C>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001070951 rs1817867722 |
312 | C>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4854299 RCV001299997 rs748945641 |
317 | T>S | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1586279297 CA371914665 RCV000791680 |
319 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1817866954 RCV001204040 |
321 | K>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000693405 rs1563575697 |
330 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000531791 CA371893338 rs1554580153 |
331 | A>D | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1587004341 CA371893320 RCV000794686 |
334 | C>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001060732 rs1812200901 |
337 | P>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA252310 RCV000002604 rs119103288 VAR_002372 RCV001003501 |
339 | G>D | Multiple congenital exostosis Exostoses, multiple, type 1 EXT1; loss of activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_002373 RCV000255752 rs119103290 RCV002512681 RCV000002606 RCV001003500 CA252315 |
340 | R>C | Multiple congenital exostosis Inborn genetic diseases Exostoses, multiple, type 1 EXT1; loss of activity; still able to form an oligomeric complex [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs119103290 RCV002537726 RCV001270018 |
340 | R>G | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
VAR_002374 RCV000254839 rs119103287 CA4854266 RCV000630812 RCV001263553 |
340 | R>H | Multiple congenital exostosis Exostoses, multiple, type 1 EXT1; loss of activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
VAR_002375 rs119103287 CA252308 RCV001003502 RCV000002601 |
340 | R>L | Multiple congenital exostosis Exostoses, multiple, type 1 EXT1; loss of activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
| VAR_002376 | 340 | R>S | EXT1; loss of activity [UniProt] | Yes | UniProt |
|
CA371893286 RCV000520455 RCV000799887 rs1554580149 |
341 | R>G | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001206165 RCV000520066 rs1554580149 CA371893285 |
341 | R>W | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA371893255 rs1554580147 RCV000630808 |
346 | R>G | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001058445 rs1812200035 |
346 | R>I | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1812199676 RCV001230822 |
352 | Q>H | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371892751 rs11546829 RCV000692001 |
355 | C>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA371892785 RCV000813609 rs1587003655 |
355 | C>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV003153565 RCV000307037 CA4854241 rs61753260 RCV000827733 |
356 | V>I | Multiple congenital exostosis Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA371892714 rs1131691337 RCV001856960 RCV000494520 |
357 | P>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1812174128 RCV001046704 |
370 | E>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000877899 RCV001655634 CA4854235 rs142122090 |
373 | N>D | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1812173838 RCV001051617 |
376 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000120872 CA159095 RCV001304404 rs371233961 |
379 | V>I | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs1812173037 RCV001211165 |
384 | R>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1812078315 RCV001039109 |
390 | P>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001050372 rs561006425 |
398 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001008755 rs1369118661 RCV001386491 |
405 | R>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1812077443 RCV001315934 |
405 | R>T | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1812077295 RCV001225043 |
407 | Q>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001071268 rs1812077342 |
407 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1812076996 RCV001224854 |
412 | W>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1812076915 RCV001246657 |
412 | W>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000805681 rs1587001428 CA371890319 RCV001662836 |
412 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000270757 CA4854201 rs756701753 |
413 | E>D | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1812075737 RCV001045567 |
427 | L>P | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000432157 rs773539946 RCV001214391 CA4854193 RCV002522378 |
427 | L>V | Multiple congenital exostosis Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001235920 rs1811943921 |
431 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371888043 RCV001216058 rs1563571318 RCV000688370 |
439 | S>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs144550328 CA4854168 RCV000630804 |
440 | R>H | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1811942900 RCV001211728 |
441 | N>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811942574 RCV001222439 |
445 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1563571296 RCV000781341 |
446 | N>HVTV* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811942159 RCV001208183 |
450 | G>E | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811942117 RCV001237964 |
451 | G>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1430395411 RCV001208184 |
451 | G>E | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000315374 RCV000120873 rs201504622 RCV001355602 CA159098 RCV000395683 |
454 | V>I | Multiple congenital exostosis Variant assessed as Somatic; 0.0 impact. Langer-Giedion syndrome [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs1811940928 RCV001217177 |
467 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001207817 rs1811941012 |
467 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000539518 rs1554579004 |
468 | Y>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001224323 rs1811940837 |
468 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001056978 rs1811940788 |
469 | Y>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811893325 RCV001070256 |
474 | L>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000120874 CA159101 rs145720047 RCV002515864 |
477 | P>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001218340 RCV001773489 rs1554578798 RCV002267737 RCV000627404 RCV000554263 |
478 | S>missing | Multiple congenital exostosis Chondrosarcoma [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811892597 RCV001261514 |
481 | T>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs763107867 RCV001208156 CA4854136 |
484 | I>F | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000120875 rs188859975 RCV001252925 RCV001343250 CA159104 VAR_012821 |
486 | A>V | Multiple congenital exostosis Microcephaly EXT1; no loss of activity [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA184282892 rs759514310 RCV000810259 |
488 | T>N | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002487173 RCV000255218 RCV000697332 RCV000821985 RCV000309326 rs886039355 |
490 | L>missing | Chondrosarcoma Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000255784 RCV000702125 RCV001003498 rs886039356 |
490 | L>missing | Multiple congenital exostosis Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001237335 rs1811890821 |
493 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_012822 | 496 | P>L | EXT1; no loss of activity [UniProt] | Yes | UniProt |
|
rs1383256196 RCV001225753 |
512 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811889486 RCV001239646 |
512 | Q>H | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001199164 RCV001528142 rs1811865335 |
517 | W>* | Multiple congenital exostosis Chondrosarcoma [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001057357 rs1811864784 |
523 | L>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371883259 rs1563569983 RCV000686425 |
526 | K>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs763608530 RCV001267058 |
529 | W>* | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1811863055 RCV001235218 |
540 | E>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001232587 rs1823353089 |
552 | P>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002471030 RCV001069870 rs1823353269 |
553 | Y>missing | Multiple congenital exostosis Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1586993159 RCV000002608 |
555 | N>missing | Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823352329 RCV001042295 |
560 | A>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823352107 RCV001205555 |
561 | V>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001236932 rs1823351882 |
561 | V>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001225197 rs1586993117 |
566 | E>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001236310 rs1554657927 RCV000598655 |
568 | T>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823350888 RCV001061701 |
573 | T>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371878593 rs1586990402 RCV000816960 |
582 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA371878588 rs1586990398 RCV001226441 RCV001008654 |
582 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs575895733 RCV001158361 CA4854018 |
583 | Q>H | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001061818 rs1823254644 |
589 | I>V | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001050119 rs1823254431 |
591 | G>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000991070 rs1586990361 |
592 | Y>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001059425 rs1823254238 |
592 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs374887549 CA4854013 RCV001165074 |
594 | A>G | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001069092 rs1823253698 |
599 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001048915 rs1718310043 |
599 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001233427 rs1823253516 |
603 | K>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000691886 rs1554657437 RCV000578934 CA371878224 |
604 | E>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001269357 rs755747479 RCV002541642 |
605 | R>Q | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001326783 rs146967463 CA4854009 COSM1095371 |
605 | R>W | Multiple congenital exostosis Variant assessed as Somatic; 0.0 impact. endometrium [ClinVar, NCI-TCGA, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000820160 rs1586990317 CA371878191 |
606 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1823253080 RCV001045430 |
606 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001227957 rs1823253013 |
607 | G>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001226097 rs1563873580 |
616 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823251698 RCV001298919 |
623 | A>T | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001229892 CA4853998 rs773393953 RCV002484253 |
625 | I>V | Multiple congenital exostosis Chondrosarcoma Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA10588446 RCV000254878 rs886039357 RCV001223213 |
626 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_002377 | 627 | H>del | EXT1; loss of activity [UniProt] | Yes | UniProt |
|
RCV001217974 rs1823215251 |
629 | Y>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823215172 RCV001040983 |
630 | Y>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000803549 rs1586989220 CA371877624 |
637 | Y>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001207642 rs1823214768 |
642 | L>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823214606 RCV001317044 |
646 | V>L | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000816709 rs1586989202 |
648 | Q>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001030025 rs1586989189 |
651 | N>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001205936 rs1823213816 |
656 | L>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001242679 rs1823213767 |
657 | M>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371876991 RCV000494661 RCV001384344 rs1131692020 |
667 | L>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1563872934 RCV000705577 |
669 | P>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823212809 RCV001054605 |
676 | K>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823212774 RCV001221028 |
677 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001034929 rs1823212594 |
682 | M>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001217392 rs1823212414 |
685 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000630818 rs1554656288 |
687 | S>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs746678682 CA4853948 RCV000988111 |
691 | R>H | Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001197708 rs1823138986 |
693 | A>missing | Chondrosarcoma [ClinVar] | Yes |
ClinVar dbSNP |
|
CA371890190 rs1363815113 RCV000579207 RCV000630806 |
701 | R>* | Multiple congenital exostosis Variant assessed as Somatic; 0.0 impact. [ClinVar, NCI-TCGA] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
rs1554656266 CA371890173 RCV000630815 |
702 | Q>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001221029 rs1823137578 |
705 | M>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1823137520 RCV001228610 |
707 | T>missing | Multiple congenital exostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
CA236312 RCV001057521 RCV000171418 rs786205593 |
711 | W>* | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000988110 CA371889969 rs1225915837 |
715 | M>V | Exostoses, multiple, type 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA371889917 rs751787859 RCV001303794 |
719 | H>P | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA371889904 RCV001165073 rs1373349863 RCV003163361 |
720 | S>C | Multiple congenital exostosis Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs1188494289 RCV001338785 CA371889721 |
732 | Q>R | Multiple congenital exostosis [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs770545182 CA4854449 |
3 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 4 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1266937798 CA371916792 |
4 | K>Q | No |
ClinGen gnomAD |
|
|
rs61757381 CA184682608 |
4 | K>R | No |
ClinGen gnomAD |
|
| rs759834555 | 5 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1226048368 CA371916786 |
5 | K>Q | No |
ClinGen gnomAD |
|
|
CA4854447 rs200815125 |
6 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA371916774 rs200815125 |
6 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1586280365 CA371916769 |
7 | Y>C | No |
ClinGen Ensembl |
|
|
rs772883826 CA4854446 |
9 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854445 rs769143352 |
11 | L>V | No |
ClinGen ExAC |
|
|
CA4854443 rs780457793 |
12 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA371916732 rs1291059341 |
13 | A>G | No |
ClinGen gnomAD |
|
|
rs915340058 CA184682595 |
15 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA4854439 rs545138851 |
16 | C>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs751570075 CA4854435 |
19 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000483890 CA16618593 rs1064795778 |
21 | F>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs142281281 CA184682588 |
22 | Y>H | No |
ClinGen Ensembl |
|
|
CA4854433 rs200276819 |
23 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371916659 rs1306372997 |
24 | G>V | No |
ClinGen gnomAD |
|
|
rs752644731 CA4854432 |
25 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs533027765 CA4854430 |
30 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4854428 rs766091879 |
31 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA4854427 CA184682578 rs147654656 |
33 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4854424 rs749767023 |
34 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs771543794 CA4854425 |
34 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA371916588 rs775906242 |
35 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746188012 CA4854421 |
36 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371916586 rs746188012 |
36 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854422 rs770352704 |
36 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854419 rs757411850 |
37 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs794726874 RCV000173067 CA238557 |
38 | E>G | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA4854418 rs747288908 |
38 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA371916566 rs78429222 |
39 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1186563531 CA371916550 |
41 | S>R | No |
ClinGen gnomAD |
|
|
CA4854414 rs754998142 |
42 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854415 rs368382074 |
42 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371916543 rs1199393037 |
43 | R>K | No |
ClinGen gnomAD |
|
|
CA371916540 rs1482036956 |
43 | R>S | No |
ClinGen gnomAD |
|
|
rs1182285664 CA371916538 |
44 | N>D | No |
ClinGen TOPMed |
|
|
CA371916534 rs1586280182 |
44 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 45 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1052157677 CA184682562 |
47 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
CA4854411 rs150846666 |
49 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761175866 CA371916487 |
51 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA4854408 rs761175866 |
51 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs375138320 CA4854409 |
51 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs371717237 CA4854407 |
52 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1390552631 CA371916472 |
53 | H>Q | No |
ClinGen TOPMed |
|
|
rs770218370 CA4854406 |
54 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371916462 rs1187165813 |
55 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
rs368004125 CA4854405 |
56 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA184682551 rs995965831 |
57 | R>P | No |
ClinGen Ensembl |
|
|
CA184682545 rs142365518 |
61 | A>P | No |
ClinGen ESP TOPMed |
|
|
CA4854403 rs373794512 |
62 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs187891947 CA184682542 |
63 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4854402 rs187891947 |
63 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4854399 rs748138510 |
64 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs772363578 CA4854400 |
64 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1242925512 CA371916393 |
66 | V>G | No |
ClinGen TOPMed |
|
|
CA184682536 rs776249474 |
67 | P>A | No |
ClinGen Ensembl |
|
|
rs371817652 CA4854398 |
67 | P>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4854397 rs371817652 |
67 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371916376 rs1177400977 |
69 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 69 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4854396 rs367543871 |
70 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1272922541 CA371916360 |
71 | L>F | No |
ClinGen gnomAD |
|
|
rs750250958 CA371916344 |
73 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1265397820 CA371916347 |
73 | N>S | No |
ClinGen gnomAD |
|
|
rs1318780364 CA371916339 |
74 | E>G | No |
ClinGen gnomAD |
|
|
rs867664035 CA184682530 |
75 | D>N | No |
ClinGen gnomAD |
|
|
rs867664035 CA371916335 |
75 | D>Y | No |
ClinGen gnomAD |
|
|
rs1409426317 CA371916325 |
76 | S>Y | No |
ClinGen gnomAD |
|
|
CA4854392 rs767034189 |
77 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs768341134 CA4854390 |
77 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs763650236 CA4854389 |
78 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA371916292 rs1456372365 |
81 | S>C | No |
ClinGen gnomAD |
|
|
CA371916291 COSM202328 rs1456372365 |
81 | S>F | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1038504618 CA184682523 |
82 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs760030507 CA4854388 |
82 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA371916286 rs1249187315 |
83 | R>G | No |
ClinGen gnomAD |
|
| rs1554601559 | 83 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs1554601559 | 83 | R>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1064793753 CA16618592 RCV000483829 |
84 | Q>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs376231630 CA4854386 |
84 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201918002 CA4854387 |
84 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 85 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 85 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779457389 CA184682517 |
90 | S>C | No |
ClinGen gnomAD |
|
|
rs772121819 CA4854383 |
92 | I>F | No |
ClinGen ExAC |
|
|
CA371916218 rs1261383828 |
93 | Y>C | No |
ClinGen gnomAD |
|
|
CA371916222 rs1402667727 |
93 | Y>N | No |
ClinGen TOPMed |
|
|
rs1327278823 CA371916209 |
94 | K>R | No |
ClinGen gnomAD |
|
|
CA371916174 rs1397695425 COSM421756 |
99 | R>C | Variant assessed as Somatic; impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA4854381 rs778849200 |
99 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768927789 CA4854380 |
100 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1331448500 CA371916171 |
100 | M>L | No |
ClinGen gnomAD |
|
|
CA371916158 rs1384997375 |
101 | E>G | No |
ClinGen gnomAD |
|
|
CA371916161 rs1350817754 |
101 | E>Q | No |
ClinGen gnomAD |
|
|
rs1254195378 CA371916154 |
102 | S>T | No |
ClinGen Ensembl |
|
|
rs1242235773 CA371916147 |
103 | C>R | No |
ClinGen gnomAD |
|
| TCGA novel | 103 | C>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000627629 rs1554601550 |
105 | D>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 105 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 105 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371916097 rs1563659624 |
109 | C>W | No |
ClinGen Ensembl |
|
|
rs1178109514 CA371916092 |
110 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 112 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1377414352 CA371916066 |
114 | F>L | No |
ClinGen gnomAD |
|
|
rs201368821 CA4854373 |
115 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs146127753 CA4854374 |
115 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA184682506 rs371163252 |
116 | V>F | No |
ClinGen ESP TOPMed |
|
|
CA4854372 rs763562992 |
117 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1208144072 CA371916042 |
118 | V>I | No |
ClinGen gnomAD |
|
|
rs1360494729 CA371916032 |
119 | Y>C | No |
ClinGen gnomAD |
|
|
rs1415760714 CA371916034 |
119 | Y>H | No |
ClinGen gnomAD |
|
|
CA4854370 rs752226935 |
120 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs377676265 CA4854371 |
120 | P>S | No |
ClinGen ESP ExAC gnomAD |
|
|
RCV000482388 rs1064793465 |
121 | Q>missing | No |
ClinVar dbSNP |
|
|
CA371916020 rs1204529411 |
121 | Q>L | No |
ClinGen gnomAD |
|
|
rs773394301 CA4854366 |
123 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs773394301 CA371916006 |
123 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs761940324 CA4854364 |
124 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs767986411 CA4854365 |
124 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs143019224 CA4854362 |
127 | I>N | No |
ClinGen ESP ExAC |
|
|
CA159092 rs587778298 RCV000120871 |
128 | A>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs867724110 CA184682490 |
128 | A>V | No |
ClinGen Ensembl |
|
|
CA4854361 rs775712594 |
129 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1249105856 CA371915961 |
130 | S>N | No |
ClinGen TOPMed |
|
|
rs1414678503 CA371915946 |
132 | Q>* | No |
ClinGen gnomAD |
|
| TCGA novel | 133 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs938133710 CA184682487 |
134 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA371915915 rs1171135662 |
137 | A>T | No |
ClinGen gnomAD |
|
|
RCV001269960 rs1817880834 |
139 | E>missing | No |
ClinVar dbSNP |
|
|
CA4854360 rs769557488 |
140 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1316804046 CA371915863 |
144 | Y>C | No |
ClinGen gnomAD |
|
|
CA184682482 rs564568537 |
146 | S>L | No |
ClinGen Ensembl |
|
|
rs1245037592 CA371915847 |
147 | D>Y | No |
ClinGen gnomAD |
|
|
rs1414318910 CA371915832 |
149 | S>N | No |
ClinGen TOPMed |
|
|
CA184682480 rs922587596 |
150 | Q>K | No |
ClinGen TOPMed |
|
|
rs1385688129 CA371915814 |
151 | A>E | No |
ClinGen gnomAD |
|
|
rs1402547599 CA371915817 |
151 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA4854357 rs757114989 |
154 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854355 rs777356297 |
156 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA4854354 rs758078822 |
158 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs975395118 CA184682472 |
160 | T>N | No |
ClinGen TOPMed |
|
|
CA371915754 rs1410364563 |
161 | L>S | No |
ClinGen TOPMed |
|
|
CA4854353 rs752137032 |
162 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs544496246 CA184682469 |
163 | R>G | No |
ClinGen TOPMed |
|
|
rs546339685 CA184682467 |
167 | S>* | No |
ClinGen Ensembl |
|
|
CA371915711 rs1227559201 |
167 | S>A | No |
ClinGen gnomAD |
|
|
CA4854352 rs764741916 |
170 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA371915679 rs1403919037 |
172 | H>Y | No |
ClinGen TOPMed |
|
|
rs1448140995 CA371915673 |
173 | N>D | No |
ClinGen gnomAD |
|
|
rs1586279681 CA371915660 |
174 | L>F | No |
ClinGen Ensembl |
|
|
CA4854351 rs756568263 |
175 | R>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 176 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762291120 CA4854348 |
177 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 179 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4854347 rs774883865 |
180 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854345 rs763278350 |
182 | H>Y | No |
ClinGen ExAC |
|
|
rs1387642251 CA371915578 |
186 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1387642251 CA371915579 |
186 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA4854344 COSM1095379 rs775696069 |
188 | R>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1554601519 RCV000521659 |
194 | N>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinVar dbSNP NCI-TCGA |
|
rs1184228548 CA371915499 |
197 | S>A | No |
ClinGen gnomAD |
|
|
rs776678803 CA4854341 |
197 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA371915498 rs776678803 |
197 | S>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 198 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746766470 CA4854339 |
199 | T>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 206 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs757995060 CA4854337 |
207 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1228859857 CA371915432 |
207 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1217793768 CA371915424 |
208 | G>E | No |
ClinGen gnomAD |
|
|
rs747844962 CA4854336 |
211 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854334 rs146407656 |
212 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| VAR_012818 | 215 | M>I | isolated osteochondroma; somatic mutation [UniProt] | No | UniProt |
| TCGA novel | 215 | M>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750877327 CA4854333 |
215 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA4854332 rs781678414 |
216 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854331 rs757740272 |
217 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA371915347 rs1405346511 |
219 | A>V | No |
ClinGen gnomAD |
|
|
rs751926824 CA4854330 |
221 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs1473004303 CA371915329 |
222 | S>T | No |
ClinGen gnomAD |
|
|
rs149242997 CA4854329 |
223 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1336562431 CA371915297 |
226 | F>L | No |
ClinGen gnomAD |
|
|
rs753036738 CA4854327 |
229 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 230 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1003279912 CA184682436 |
234 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1003279912 CA371915248 |
234 | I>V | No |
ClinGen TOPMed gnomAD |
|
| VAR_012819 | 235 | P>del | multiple osteochondromas [UniProt] | No | UniProt |
| TCGA novel | 236 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371915236 rs1451032732 |
236 | L>V | No |
ClinGen gnomAD |
|
|
RCV001269536 rs1817872593 |
240 | D>missing | No |
ClinVar dbSNP |
|
|
CA4854325 rs759603929 |
240 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs906230630 CA184682433 |
242 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 244 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 245 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1293618270 CA371915167 |
246 | G>E | No |
ClinGen TOPMed |
|
|
CA371915168 rs1287362675 |
246 | G>W | No |
ClinGen gnomAD |
|
|
rs1380196220 CA371915154 |
248 | R>K | No |
ClinGen TOPMed |
|
| TCGA novel | 249 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371915148 rs1487566666 |
249 | G>R | No |
ClinGen Ensembl |
|
|
CA184682426 rs920291906 |
250 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
CA371915142 rs920291906 |
250 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
CA371915136 rs1294549175 |
251 | L>M | No |
ClinGen gnomAD |
|
|
CA371915111 rs1433419013 |
254 | N>Y | No |
ClinGen gnomAD |
|
|
CA371915101 rs1348650954 |
255 | T>N | No |
ClinGen gnomAD |
|
|
CA4854318 rs768201929 |
258 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854317 rs768201929 |
258 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371915052 rs1481574908 |
263 | M>V | No |
ClinGen gnomAD |
|
|
CA4854314 rs377162411 |
264 | L>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4854315 rs779457224 |
264 | L>V | No |
ClinGen ExAC gnomAD |
|
|
RCV000173068 rs794726875 |
270 | R>missing | No |
ClinVar dbSNP |
|
|
CA371915004 rs1477621319 |
270 | R>K | No |
ClinGen gnomAD |
|
|
CA371915001 rs1244929754 |
270 | R>S | No |
ClinGen gnomAD |
|
|
RCV000486275 CA16618590 rs1064793786 |
271 | Y>C | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs752153917 CA4854313 |
273 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371914983 rs1185024233 |
273 | T>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs886041699 RCV000397830 |
274 | G>missing | No |
ClinVar dbSNP |
|
|
CA371914975 rs778280138 |
275 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854312 rs778280138 |
275 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1038559683 CA184682413 |
276 | G>E | No |
ClinGen TOPMed |
|
|
rs1586279413 CA371914963 |
277 | S>A | No |
ClinGen Ensembl |
|
|
CA4854310 rs753126504 |
278 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs1383240763 CA371914938 |
281 | N>D | No |
ClinGen TOPMed |
|
|
CA184682410 rs868304903 |
282 | A>V | No |
ClinGen Ensembl |
|
|
rs1302336455 CA371914918 |
284 | Y>H | No |
ClinGen gnomAD |
|
|
rs551552671 CA4854309 |
286 | V>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM748504 CA371914903 rs551552671 |
286 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA4854308 rs759708614 |
290 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA371914870 rs1423177713 |
291 | D>N | No |
ClinGen TOPMed |
|
| TCGA novel | 292 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760572042 CA4854305 |
294 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA371914835 rs1318697804 |
296 | T>N | No |
ClinGen gnomAD |
|
|
CA4854304 rs773198507 |
300 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA371914783 rs1176457130 |
303 | D>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 303 | D>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1413726979 CA371914780 |
304 | W>G | No |
ClinGen gnomAD |
|
|
rs1554601473 RCV000482859 |
307 | H>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 307 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771837506 CA4854303 |
308 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs908702874 CA184682397 |
310 | S>F | No |
ClinGen TOPMed |
|
|
CA4854301 rs774050402 |
311 | R>L | No |
ClinGen ExAC |
|
|
rs1191253387 CA371914703 |
314 | R>S | No |
ClinGen TOPMed gnomAD |
|
| VAR_012820 | 316 | N>S | chondrosarcoma; no loss of activity [UniProt] | No | UniProt |
| TCGA novel | 317 | T>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1483996169 CA371914663 |
320 | E>Q | No |
ClinGen gnomAD |
|
|
rs779587832 CA4854298 |
321 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA184298142 rs879009226 |
322 | Y>C | No |
ClinGen Ensembl |
|
|
rs1554580158 CA371893384 RCV000521970 |
324 | Y>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA184298137 rs1046093250 |
324 | Y>C | No |
ClinGen Ensembl |
|
|
CA4854273 rs748651137 |
325 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371893381 rs1394508840 COSM1674134 |
325 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA4854271 rs755363067 |
329 | H>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA371893353 rs755363067 |
329 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371893333 rs1296350429 |
332 | T>S | No |
ClinGen gnomAD |
|
|
rs1386640697 CA371893331 |
332 | T>S | No |
ClinGen TOPMed |
|
|
rs201458269 CA371893322 CA184298100 |
333 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs538199953 CA4854270 |
334 | C>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4854269 rs538199953 |
334 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA184298072 rs113568296 |
336 | V>A | No |
ClinGen Ensembl |
|
|
CA4854268 rs756329599 |
336 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288618931 CA371893297 |
338 | R>H | No |
ClinGen TOPMed |
|
|
RCV000412945 rs1057518031 |
339 | G>missing | No |
ClinVar dbSNP |
|
|
rs1206600641 CA371893271 |
343 | G>E | No |
ClinGen TOPMed |
|
|
CA184298030 rs978347552 |
343 | G>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA184298027 rs967322756 |
344 | S>A | No |
ClinGen Ensembl |
|
|
rs1212142934 CA371893240 |
348 | L>M | No |
ClinGen gnomAD |
|
|
rs1212142934 CA371893239 |
348 | L>V | No |
ClinGen gnomAD |
|
|
CA184298026 rs912913696 |
349 | E>G | No |
ClinGen Ensembl |
|
| TCGA novel | 349 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1300462534 CA371892804 |
354 | A>S | No |
ClinGen gnomAD |
|
| TCGA novel | 354 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 356 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760043953 CA4854240 |
358 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760043953 CA371892708 |
358 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA184296618 rs1045353860 |
359 | M>I | No |
ClinGen Ensembl |
|
|
rs549241569 CA4854239 |
359 | M>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371892684 rs549241569 |
359 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371892638 rs1382345913 |
361 | S>G | No |
ClinGen gnomAD |
|
|
CA4854238 rs527518789 |
362 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371892596 CA4854237 rs763568003 |
363 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA371892557 rs1554580035 RCV000579192 |
364 | W>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1028715003 CA184296611 |
365 | E>K | No |
ClinGen TOPMed |
|
|
rs1371506021 CA371892454 |
367 | P>T | No |
ClinGen gnomAD |
|
| TCGA novel | 371 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1248648070 CA371892324 |
371 | V>M | No |
ClinGen gnomAD |
|
|
CA371892180 rs1463673192 |
375 | N>D | No |
ClinGen gnomAD |
|
|
CA4854234 rs746080792 |
377 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4854233 rs371233961 |
379 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000176987 rs747020325 CA371892016 CA243103 |
380 | I>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA4854232 rs747020325 |
380 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM202286 rs146983754 CA184296527 |
382 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP NCI-TCGA gnomAD |
|
rs1057520535 RCV000441764 CA16605944 |
383 | E>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA4854229 rs752721885 |
384 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374821962 COSM1313665 CA4854209 |
392 | T>I | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs374821962 CA371890680 |
392 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4854208 rs748083628 |
393 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA184291928 rs1014256212 |
394 | R>G | No |
ClinGen TOPMed |
|
|
CA371890640 rs1441820398 |
395 | S>C | No |
ClinGen TOPMed |
|
|
CA4854206 rs749048200 |
396 | I>F | No |
ClinGen ExAC gnomAD |
|
|
COSM94261 CA4854205 rs749048200 |
396 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA371890603 rs1222448496 |
397 | H>R | No |
ClinGen gnomAD |
|
|
rs561006425 CA4854204 |
398 | Q>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371890568 rs1275929525 |
399 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA371890558 rs1436463800 |
400 | K>E | No |
ClinGen gnomAD |
|
|
rs1368862860 CA371890530 |
401 | I>T | No |
ClinGen gnomAD |
|
|
rs755694640 CA4854203 |
409 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
RCV000760420 CA371890326 rs1563573730 |
412 | W>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA184291867 rs886545537 |
413 | E>K | No |
ClinGen Ensembl |
|
|
CA371890287 rs1350355119 |
414 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 420 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4854197 rs147847222 |
420 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371890179 rs1427060439 |
422 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1251797288 CA371890175 |
423 | V>I | No |
ClinGen TOPMed |
|
|
rs1183473800 CA371890136 |
425 | T>A | No |
ClinGen TOPMed |
|
|
CA4854192 rs772435035 |
428 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs748311058 CA184285176 |
432 | D>E | No |
ClinGen gnomAD |
|
|
rs942079736 CA184285153 |
434 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs183760697 CA4854173 |
435 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1277354611 CA371888079 |
437 | H>D | No |
ClinGen gnomAD |
|
|
rs768927725 CA4854170 |
438 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1228119516 CA371888056 |
438 | I>T | No |
ClinGen TOPMed |
|
|
rs774546763 CA4854171 |
438 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854169 rs762790189 |
440 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
RCV001008833 rs1586997875 |
441 | N>missing | No |
ClinVar dbSNP |
|
|
rs1313210405 CA371887994 |
442 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs531329914 CA4854167 |
444 | I>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1554579012 CA371887948 RCV000521590 |
445 | W>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA371887917 rs745637397 |
446 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1563571296 CA913189985 |
447 | K>H | No |
ClinGen Ensembl |
|
|
CA371887846 rs1484937234 |
449 | P>L | No |
ClinGen gnomAD |
|
|
rs1430395411 CA371887788 |
451 | G>V | No |
ClinGen gnomAD |
|
|
rs770549520 CA4854164 |
452 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA4854162 rs201504622 |
454 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4854159 rs756607210 |
457 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA4854160 rs756607210 |
457 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA371887348 rs1427260383 |
462 | L>P | No |
ClinGen TOPMed |
|
|
rs1314115386 CA371887312 |
463 | G>V | No |
ClinGen TOPMed |
|
| TCGA novel | 464 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 465 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs867994630 CA184285017 |
466 | P>S | No |
ClinGen Ensembl |
|
|
CA371887127 rs1375505148 |
468 | Y>C | No |
ClinGen TOPMed |
|
|
CA4854158 rs750748090 |
469 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750748090 CA371887103 |
469 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746738537 CA184285006 |
470 | A>T | No |
ClinGen gnomAD |
|
|
rs768039171 CA4854157 |
470 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 471 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4854156 rs376449014 |
472 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA371885610 rs1473758294 |
473 | G>D | No |
ClinGen TOPMed |
|
|
CA371887025 rs1231742212 |
473 | G>S | No |
ClinGen gnomAD |
|
|
CA371885599 rs1182351764 |
474 | L>V | No |
ClinGen TOPMed |
|
|
CA371885551 rs1442814688 |
475 | K>N | No |
ClinGen TOPMed |
|
|
rs751005275 CA4854140 |
476 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1391879741 CA371885499 |
478 | S>F | No |
ClinGen gnomAD |
|
|
CA4854138 rs751981937 |
479 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA4854137 rs192596226 |
479 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1327351154 CA371885436 |
483 | V>L | No |
ClinGen TOPMed |
|
|
rs1159467409 CA371885418 |
485 | H>R | No |
ClinGen gnomAD |
|
|
rs1586996629 RCV001009247 |
488 | T>missing | No |
ClinVar dbSNP |
|
|
rs759514310 CA371885374 |
488 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1586996637 CA371885385 |
488 | T>P | No |
ClinGen Ensembl |
|
|
rs759514310 CA4854134 |
488 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854130 rs201112673 |
489 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201112673 CA4854131 |
489 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA371885307 rs1586996606 |
490 | L>R | No |
ClinGen Ensembl |
|
| rs886039355 | 490 | L>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA184282847 rs369235843 |
492 | S>F | No |
ClinGen ESP TOPMed |
|
|
rs773877597 CA4854127 |
494 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA371885124 rs1248917798 |
494 | S>P | No |
ClinGen gnomAD |
|
|
CA4854126 rs139784916 |
496 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781738386 CA4854124 |
499 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA371884790 COSM1635618 CA371884789 rs778048374 |
502 | V>L | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA4854121 rs778048374 |
502 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 503 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371884750 rs1460054632 |
503 | A>V | No |
ClinGen TOPMed |
|
|
rs752931018 CA4854119 |
504 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA184282745 rs201675147 |
506 | K>R | No |
ClinGen 1000Genomes |
|
|
CA371884557 rs1468056863 |
508 | Q>H | No |
ClinGen gnomAD |
|
|
rs915757314 CA184282739 |
508 | Q>R | No |
ClinGen TOPMed |
|
|
CA371884527 rs1475246488 |
509 | Y>C | No |
ClinGen TOPMed |
|
|
rs1383256196 CA371884422 |
512 | Q>E | No |
ClinGen gnomAD |
|
|
rs1188968853 CA371883572 |
513 | I>V | No |
ClinGen gnomAD |
|
|
rs1475399570 CA371883541 |
514 | I>M | No |
ClinGen gnomAD |
|
|
rs1199361133 CA371883423 |
518 | N>K | No |
ClinGen TOPMed |
|
|
rs750392304 CA4854096 |
518 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554578706 RCV000523456 CA371883381 |
519 | C>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA184281719 rs754578641 |
521 | K>R | No |
ClinGen Ensembl |
|
|
CA184281713 rs752889463 |
522 | P>S | No |
ClinGen Ensembl |
|
|
rs1427879295 CA371883293 |
524 | P>A | No |
ClinGen TOPMed |
|
|
CA371883275 rs1285562876 |
525 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA184281705 rs901022947 |
526 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs761451875 CA4854094 |
528 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4854093 rs751404551 |
528 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371883219 rs751404551 |
528 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs763608530 CA4854092 |
529 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA4854091 rs762747719 |
530 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1328220647 CA371883190 |
531 | A>D | No |
ClinGen gnomAD |
|
|
rs1336890378 CA371883193 |
531 | A>T | No |
ClinGen gnomAD |
|
|
CA4854090 rs775110739 |
533 | A>T | No |
ClinGen ExAC gnomAD |
|
|
COSM1551504 CA371883150 rs769496005 |
534 | V>L | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs769496005 CA4854089 |
534 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA184281650 rs1006713733 |
535 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA4854087 rs144397063 |
537 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4854085 COSM1454475 rs767492816 |
538 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1233420413 CA371883082 |
539 | I>F | No |
ClinGen gnomAD |
|
|
CA4854084 rs779357756 |
539 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs779357756 CA371883080 |
539 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA371883062 rs1435547768 |
541 | G>R | No |
ClinGen gnomAD |
|
|
rs866736802 CA184281593 |
544 | K>N | No |
ClinGen Ensembl |
|
|
rs759528254 CA4854083 |
544 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1368926188 CA371881672 |
545 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1322784502 CA371881643 |
546 | M>I | No |
ClinGen gnomAD |
|
|
rs780189656 CA4854060 |
548 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs770038045 CA4854059 |
549 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1317388728 COSM3698808 CA371881528 |
549 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1317388728 CA371881525 |
549 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4854058 rs745890180 |
551 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 552 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751582814 CA371881432 COSM280905 |
554 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4854055 rs751582814 |
554 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777698557 CA4854053 |
555 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1392782817 CA371881409 |
555 | N>I | No |
ClinGen gnomAD |
|
|
rs561994950 CA4854052 |
558 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371881269 rs752594306 |
559 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754680491 CA4854049 |
560 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1486918382 CA371881211 |
560 | A>V | No |
ClinGen gnomAD |
|
|
CA371881085 rs1345805410 |
563 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA371881048 rs1297906558 |
564 | L>F | No |
ClinGen gnomAD |
|
|
CA371880994 rs1586993117 |
566 | E>K | No |
ClinGen Ensembl |
|
|
CA371880927 COSM1454473 rs1361550108 |
568 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1428345482 CA371880919 |
569 | V>M | No |
ClinGen gnomAD |
|
|
CA371880874 rs1305323658 |
571 | S>L | No |
ClinGen TOPMed |
|
|
rs1064794137 RCV000479149 |
576 | D>missing | No |
ClinVar dbSNP |
|
|
rs775804762 CA4854021 |
578 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA4854020 rs765703551 |
581 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1309175788 CA371878578 |
583 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 584 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371878556 rs1563873618 |
584 | S>R | No |
ClinGen Ensembl |
|
|
CA371878516 rs1231316310 |
587 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 590 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1335741663 CA371878442 |
591 | G>A | No |
ClinGen gnomAD |
|
|
CA4854015 rs773446843 |
592 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA371878433 rs1586990360 |
592 | Y>D | No |
ClinGen Ensembl |
|
|
rs773446843 CA371878430 |
592 | Y>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 593 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371878404 rs1388996809 |
594 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 595 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371878347 rs1586990341 |
597 | H>R | No |
ClinGen Ensembl |
|
|
rs138006768 CA4854011 |
599 | W>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138006768 CA371878318 |
599 | W>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372876057 CA4854010 |
601 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755747479 CA4854008 |
605 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA4854006 rs184475999 |
610 | S>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs534809501 CA4854005 |
613 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4854004 rs753261171 |
613 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1252579899 COSM275026 CA371878039 |
615 | D>N | large_intestine Variant assessed as Somatic; 4.619e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4853999 rs761025295 |
619 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA4854000 CA4854001 rs766571771 |
619 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs772344042 CA371877869 |
627 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371877863 rs1251059183 |
628 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1586989230 CA371877714 |
632 | Y>S | No |
ClinGen Ensembl |
|
|
rs760190441 CA184269623 |
637 | Y>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1563872968 CA371877485 |
645 | M>V | No |
ClinGen Ensembl |
|
| TCGA novel | 647 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371877387 rs761914342 |
648 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371877343 rs1315338862 |
650 | A>D | No |
ClinGen gnomAD |
|
| TCGA novel | 651 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1294490923 CA371877252 |
655 | I>V | No |
ClinGen TOPMed |
|
|
CA371877201 rs1390390714 |
657 | M>I | No |
ClinGen TOPMed |
|
|
CA371877134 rs762841739 CA371877138 |
659 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768587413 CA4853973 |
659 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA371877130 rs1335974361 |
660 | L>Q | No |
ClinGen gnomAD |
|
|
CA371877102 rs775353874 |
661 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs775353874 CA4853971 |
661 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs769638712 CA4853970 |
662 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA371877083 rs769638712 |
662 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1016811822 CA184269598 |
665 | T>I | No |
ClinGen Ensembl |
|
|
rs1290707883 CA371876973 |
668 | P>S | No |
ClinGen TOPMed |
|
|
CA184269586 rs961046001 |
669 | P>L | No |
ClinGen TOPMed |
|
|
CA184269595 rs868551404 |
669 | P>S | No |
ClinGen TOPMed |
|
|
CA184269582 rs1006977291 |
670 | I>F | No |
ClinGen gnomAD |
|
|
rs1006977291 CA371876951 |
670 | I>V | No |
ClinGen gnomAD |
|
|
rs776200312 CA4853968 |
674 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 676 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371876849 RCV000578692 rs1554657213 |
678 | Y>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1278931362 CA371876800 |
682 | M>T | No |
ClinGen gnomAD |
|
|
rs1340913968 CA371876781 |
683 | M>I | No |
ClinGen gnomAD |
|
|
CA371876789 rs1198261263 |
683 | M>L | No |
ClinGen gnomAD |
|
|
rs1282927259 CA371890356 |
687 | S>F | No |
ClinGen gnomAD |
|
|
rs138855109 CA4853949 |
688 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371890338 rs1336352739 |
689 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1336352739 CA371890339 |
689 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1586987089 CA371890322 |
691 | R>C | No |
ClinGen Ensembl |
|
|
CA371890298 rs1326876362 |
693 | A>T | No |
ClinGen gnomAD |
|
|
rs1461749491 CA371890273 |
695 | P>T | No |
ClinGen gnomAD |
|
|
rs771535658 CA4853946 |
696 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA184316453 rs773320520 |
700 | Q>K | No |
ClinGen gnomAD |
|
|
CA184316440 rs867830291 |
700 | Q>R | No |
ClinGen Ensembl |
|
|
CA371890134 rs1287294447 |
705 | M>V | No |
ClinGen TOPMed |
|
|
rs756718693 CA4853943 |
707 | T>M | No |
ClinGen ExAC |
|
|
CA184316418 rs905281147 |
709 | A>S | No |
ClinGen gnomAD |
|
|
CA371890065 rs1451386410 |
710 | S>G | No |
ClinGen gnomAD |
|
|
CA184316406 rs575830428 |
712 | F>L | No |
ClinGen 1000Genomes gnomAD |
|
|
rs767171278 CA184316402 |
713 | G>S | No |
ClinGen Ensembl |
|
|
CA371889967 rs1225915837 |
715 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4853941 rs781722411 |
716 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA371889923 rs1364578501 |
719 | H>D | No |
ClinGen gnomAD |
|
|
rs751787859 CA4853939 |
719 | H>L | No |
ClinGen ExAC gnomAD |
|
|
rs751787859 CA371889919 |
719 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA4853938 rs764391436 |
721 | Q>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 721 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4853937 rs758347621 |
724 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4853935 rs765113358 |
725 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4853933 rs146096724 |
727 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1586987017 CA371889700 |
733 | V>G | No |
ClinGen Ensembl |
|
|
CA184316358 rs200106029 |
735 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 742 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371889520 rs1477526677 |
743 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs756691505 CA184316348 |
745 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
3 associated diseases with Q16394
[MIM: 133700]: Hereditary multiple exostoses 1 (EXT1)
EXT is a genetically heterogeneous bone disorder caused by genes segregating on human chromosomes 8, 11, and 19 and designated EXT1, EXT2 and EXT3 respectively. EXT is a dominantly inherited skeletal disorder primarily affecting endochondral bone during growth. The disease is characterized by formation of numerous cartilage-capped, benign bone tumors (osteocartilaginous exostoses or osteochondromas) that are often accompanied by skeletal deformities and short stature. In a small percentage of cases exostoses have exhibited malignant transformation resulting in an osteosarcoma or chondrosarcoma. Osteochondromas development can also occur as a sporadic event. {ECO:0000269|PubMed:10441575, ECO:0000269|PubMed:10480354, ECO:0000269|PubMed:11169766, ECO:0000269|PubMed:8981950, ECO:0000269|PubMed:9326317, ECO:0000269|PubMed:9463333, ECO:0000269|PubMed:9521425, ECO:0000269|Ref.11}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 150230]: Tricho-rhino-phalangeal syndrome 2 (TRPS2)
A syndrome that combines the clinical features of tricho-rhino-phalangeal syndrome type 1 and multiple exostoses type 1. Affected individuals manifest multiple dysmorphic facial features including large, laterally protruding ears, a bulbous nose, an elongated upper lip, as well as sparse scalp hair, winged scapulae, multiple cartilaginous exostoses, redundant skin, and intellectual disability. Note=The gene represented in this entry is involved in disease pathogenesis. A chromosomal aberration resulting in the loss of functional copies of TRPS1 and EXT1 has been found in TRPS2 patients.
[MIM: 215300]: Chondrosarcoma (CHDSA)
A malignant neoplasm derived from cartilage cells. Chondrosarcomas range from slow-growing non-metastasizing lesions to highly aggressive metastasizing sarcomas. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- EXT is a genetically heterogeneous bone disorder caused by genes segregating on human chromosomes 8, 11, and 19 and designated EXT1, EXT2 and EXT3 respectively. EXT is a dominantly inherited skeletal disorder primarily affecting endochondral bone during growth. The disease is characterized by formation of numerous cartilage-capped, benign bone tumors (osteocartilaginous exostoses or osteochondromas) that are often accompanied by skeletal deformities and short stature. In a small percentage of cases exostoses have exhibited malignant transformation resulting in an osteosarcoma or chondrosarcoma. Osteochondromas development can also occur as a sporadic event. {ECO:0000269|PubMed:10441575, ECO:0000269|PubMed:10480354, ECO:0000269|PubMed:11169766, ECO:0000269|PubMed:8981950, ECO:0000269|PubMed:9326317, ECO:0000269|PubMed:9463333, ECO:0000269|PubMed:9521425, ECO:0000269|Ref.11}. Note=The disease is caused by variants affecting the gene represented in this entry.
- A syndrome that combines the clinical features of tricho-rhino-phalangeal syndrome type 1 and multiple exostoses type 1. Affected individuals manifest multiple dysmorphic facial features including large, laterally protruding ears, a bulbous nose, an elongated upper lip, as well as sparse scalp hair, winged scapulae, multiple cartilaginous exostoses, redundant skin, and intellectual disability. Note=The gene represented in this entry is involved in disease pathogenesis. A chromosomal aberration resulting in the loss of functional copies of TRPS1 and EXT1 has been found in TRPS2 patients.
- A malignant neoplasm derived from cartilage cells. Chondrosarcomas range from slow-growing non-metastasizing lesions to highly aggressive metastasizing sarcomas. Note=The disease is caused by variants affecting the gene represented in this entry.
Functions
| Description | ||
|---|---|---|
| EC Number | 2.4.1.225 | Hexosyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| integral component of endoplasmic reticulum membrane | The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| synapse | The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. |
9 GO annotations of molecular function
| Name | Definition |
|---|---|
| acetylglucosaminyltransferase activity | Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar. |
| glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity | Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP. |
| glucuronosyltransferase activity | Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside. |
| glycosyltransferase activity | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
| heparan sulfate N-acetylglucosaminyltransferase activity | Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate. |
| metal ion binding | Binding to a metal ion. |
| N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity | Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP. |
| protein heterodimerization activity | Binding to a nonidentical protein to form a heterodimer. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
83 GO annotations of biological process
| Name | Definition |
|---|---|
| antigen processing and presentation | The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex. |
| axon guidance | The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues. |
| basement membrane organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane. |
| blood vessel remodeling | The reorganization or renovation of existing blood vessels. |
| BMP signaling pathway | The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| bone resorption | The process in which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products. |
| canonical Wnt signaling pathway | The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes. |
| cartilage development involved in endochondral bone morphogenesis | The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones. |
| cell adhesion mediated by integrin | The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits. |
| cell fate commitment | The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. |
| cellular polysaccharide biosynthetic process | The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of many (typically more than 10) monosaccharide residues linked glycosidically, occurring at the level of an individual cell. |
| cellular response to virus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
| chondrocyte hypertrophy | The growth of a chondrocyte, where growth contributes to the progression of the chondrocyte over time. |
| chondrocyte proliferation | The multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage. |
| chondroitin sulfate metabolic process | The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate. |
| collagen fibril organization | Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix. |
| cranial skeletal system development | The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. |
| dendrite self-avoidance | The process in which dendrites recognize and avoid contact with sister dendrites from the same cell. |
| dendritic cell migration | The movement of a dendritic cell within or between different tissues and organs of the body. |
| developmental growth involved in morphogenesis | The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape. |
| embryonic skeletal joint development | The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeletal joints over time, from formation to mature structure. |
| endochondral bone growth | The increase in size or mass of an endochondral bone that contributes to the shaping of the bone. |
| endochondral ossification | Replacement ossification wherein bone tissue replaces cartilage. |
| endoderm development | The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues. |
| epithelial tube branching involved in lung morphogenesis | The process in which a highly ordered sequence of patterning events generates the branched epithelial tubes of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. |
| fear response | The response of an organism to a perceived external threat. |
| fibroblast growth factor receptor signaling pathway | The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands. |
| fluid transport | The directed movement of substances that are in liquid form in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| gastrulation | A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. |
| gene expression | The process in which a gene's sequence is converted into a mature gene product (protein or RNA). This includes the production of an RNA transcript and its processing, translation and maturation for protein-coding genes. |
| glandular epithelial cell differentiation | The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. |
| glomerular basement membrane development | The process whose specific outcome is the progression of the glomerular basement membrane over time, from its formation to the mature structure. The glomerular basement membrane is the basal laminal portion of the glomerulus which performs the actual filtration. |
| glycosaminoglycan biosynthetic process | The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars. |
| hair follicle morphogenesis | The process in which the anatomical structures of the hair follicle are generated and organized. |
| heart contraction | The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body. |
| heart field specification | The process that results in the delineation of a specific region of the lateral mesoderm into the area in which the heart will develop. |
| hematopoietic stem cell differentiation | The process in which a relatively unspecialized cell acquires specialized features of a hematopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. |
| hematopoietic stem cell homeostasis | Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells. |
| hematopoietic stem cell migration to bone marrow | The orderly movement of a hematopoietic stem cell into the bone marrow, and its subsequent positioning within defined functional compartments in that microenvironment. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. |
| heparan sulfate proteoglycan biosynthetic process | The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues. |
| heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process | The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan. |
| heparin biosynthetic process | The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues. |
| hypersensitivity | An inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system. |
| leukocyte tethering or rolling | Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels. Carbohydrates on circulating leukocytes bind selectins on the vessel wall causing the leukocytes to slow down and roll along the inner surface of the vessel wall. During this rolling motion, transitory bonds are formed and broken between selectins and their ligands. Typically the first step in cellular extravasation (the movement of leukocytes out of the circulatory system, towards the site of tissue damage or infection). |
| limb joint morphogenesis | The process in which the anatomical structures of a limb joint are generated and organized. A limb joint is a flexible region that separates the rigid sections of a limb to allow movement in a controlled manner. |
| lymphocyte adhesion to endothelial cell of high endothelial venule | The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream. |
| lymphocyte migration into lymphoid organs | The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen. |
| mesenchymal cell differentiation involved in bone development | The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state. |
| mesoderm development | The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue. |
| motor behavior | The specific neuromuscular movement of a single organism in response to external or internal stimuli. |
| multicellular organism growth | The increase in size or mass of an entire multicellular organism, as opposed to cell growth. |
| multicellular organismal water homeostasis | Any process involved in the maintenance of an internal steady state of water within a tissue, organ, or a multicellular organism. |
| neural crest cell differentiation | The process in which a relatively unspecialized cell acquires specialized features of a neural crest cell. |
| olfactory bulb development | The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex. |
| optic nerve development | The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain. |
| ossification | The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. |
| ossification involved in bone maturation | The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state. |
| perichondral bone morphogenesis | The process in which bones are generated and organized as a result of the conversion of initial connective tissue surrounding cartilage into bone. |
| podocyte differentiation | The process in which a relatively unspecialized cell acquires specialized features of a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells. |
| protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
| protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. |
| protein-containing complex assembly | The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex. |
| regulation of blood pressure | Any process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure. |
| response to heparin | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus. |
| response to leukemia inhibitory factor | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukemia inhibitory factor stimulus. |
| response to light intensity | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus. |
| sebaceous gland development | The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure. |
| signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
| skeletal system development | The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton). |
| smoothened signaling pathway involved in lung development | The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein. This process contributes to lung development. |
| social behavior | Behavior directed towards society, or taking place between members of the same species. Occurs predominantly, or only, in individuals that are part of a group. |
| sodium ion homeostasis | Any process involved in the maintenance of an internal steady state of sodium ions within an organism or cell. |
| stem cell division | The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types. |
| stomach development | The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. |
| sulfation | The addition of a sulfate group to a molecule. |
| sweat gland development | The progression of the sweat gland over time, from its formation to the mature structure. Sweat glands secrete an aqueous solution that is used in thermoregulation. |
| synaptic transmission, glutamatergic | The vesicular release of glutamate from a presynapse, across a chemical synapse, the subsequent activation of glutamate receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. |
| tight junction organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other. |
| TNFSF11-mediated signaling pathway | The series of molecular signals initiated by the binding of tumor necrosis factor ligand superfamily member 11 (TNFSF11) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. |
| vacuole organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole. |
| vasodilation | An increase in the internal diameter of blood vessels, especially arterioles or capillaries, due to relaxation of smooth muscle cells that line the vessels, and usually resulting in a decrease in blood pressure. |
| vocalization behavior | The behavior in which an organism produces sounds by a mechanism involving its respiratory system. |
| wound healing | The series of events that restore integrity to a damaged tissue, following an injury. |
10 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| A5D7I4 | EXT1 | Exostosin-1 | Bos taurus (Bovine) | PR |
| O43909 | EXTL3 | Exostosin-like 3 | Homo sapiens (Human) | PR |
| P97464 | Ext1 | Exostosin-1 | Mus musculus (Mouse) | PR |
| Q10SX7 | Os03g0107900 | Probable glucuronosyltransferase Os03g0107900 | Oryza sativa subsp japonica (Rice) | PR |
| O01704 | rib-1 | Exostosin-1 homolog | Caenorhabditis elegans | PR |
| Q94AA9 | XGD1 | Xylogalacturonan beta-1,3-xylosyltransferase | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFP3 | At5g11130/At5g11120 | Probable glycosyltransferase At5g11130 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q3EAR7 | At3g42180 | Probable glycosyltransferase At3g42180 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q5IGR8 | ext1a | Exostosin-1a | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| Q5IGR7 | ext1b | Exostosin-1b | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MQAKKRYFIL | LSAGSCLALL | FYFGGLQFRA | SRSHSRREEH | SGRNGLHHPS | PDHFWPRFPD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ALRPFVPWDQ | LENEDSSVHI | SPRQKRDANS | SIYKGKKCRM | ESCFDFTLCK | KNGFKVYVYP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QQKGEKIAES | YQNILAAIEG | SRFYTSDPSQ | ACLFVLSLDT | LDRDQLSPQY | VHNLRSKVQS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LHLWNNGRNH | LIFNLYSGTW | PDYTEDVGFD | IGQAMLAKAS | ISTENFRPNF | DVSIPLFSKD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HPRTGGERGF | LKFNTIPPLR | KYMLVFKGKR | YLTGIGSDTR | NALYHVHNGE | DVVLLTTCKH |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GKDWQKHKDS | RCDRDNTEYE | KYDYREMLHN | ATFCLVPRGR | RLGSFRFLEA | LQAACVPVML |
| 370 | 380 | 390 | 400 | 410 | 420 |
| SNGWELPFSE | VINWNQAAVI | GDERLLLQIP | STIRSIHQDK | ILALRQQTQF | LWEAYFSSVE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KIVLTTLEII | QDRIFKHISR | NSLIWNKHPG | GLFVLPQYSS | YLGDFPYYYA | NLGLKPPSKF |
| 490 | 500 | 510 | 520 | 530 | 540 |
| TAVIHAVTPL | VSQSQPVLKL | LVAAAKSQYC | AQIIVLWNCD | KPLPAKHRWP | ATAVPVVVIE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GESKVMSSRF | LPYDNIITDA | VLSLDEDTVL | STTEVDFAFT | VWQSFPERIV | GYPARSHFWD |
| 610 | 620 | 630 | 640 | 650 | 660 |
| NSKERWGYTS | KWTNDYSMVL | TGAAIYHKYY | HYLYSHYLPA | SLKNMVDQLA | NCEDILMNFL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| VSAVTKLPPI | KVTQKKQYKE | TMMGQTSRAS | RWADPDHFAQ | RQSCMNTFAS | WFGYMPLIHS |
| 730 | 740 | ||||
| QMRLDPVLFK | DQVSILRKKY | RDIERL |