Q0E2Y1
Gene name |
UVR3 (Os02g0204400, LOC_Os02g10990, OSJNBb0056C19.3, P0544H11.19) |
Protein name |
(6-4)DNA photolyase |
Names |
|
Species |
Oryza sativa subsp japonica (Rice) |
KEGG Pathway |
osa:4328669 |
EC number |
4.1.99.13: Other carbon-carbon lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q0E2Y1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q0E2Y1-F1 | Predicted | AlphaFoldDB |
No variants for Q0E2Y1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q0E2Y1 | |||||
No associated diseases with Q0E2Y1
Functions
| Description | ||
|---|---|---|
| EC Number | 4.1.99.13 | Other carbon-carbon lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| deoxyribodipyrimidine photo-lyase activity | Catalysis of the reaction: cyclobutadipyrimidine (in DNA) = 2 pyrimidine residues (in DNA). This reaction represents the reactivation of irradiated DNA by light. |
| DNA (6-4) photolyase activity | Catalysis of the reaction: pyrimidine-pyrimidone (6-4) photoproduct (in DNA) = 2 pyrimidine residues (in DNA). Catalyzes the reactivation of ultraviolet-irradiated DNA. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| FAD binding | Binding to the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| circadian regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours. |
| entrainment of circadian clock by photoperiod | The synchronization of a circadian rhythm to photoperiod, the intermittent cycle of light (day) and dark (night). |
| pyrimidine dimer repair | The repair of UV-induced T-T, C-T and C-C dimers. |
| response to UV | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8QG60 | CRY2 | Cryptochrome-2 | Gallus gallus (Chicken) | PR |
| Q16526 | CRY1 | Cryptochrome-1 | Homo sapiens (Human) | PR |
| Q49AN0 | CRY2 | Cryptochrome-2 | Homo sapiens (Human) | PR |
| P97784 | Cry1 | Cryptochrome-1 | Mus musculus (Mouse) | PR |
| Q9R194 | Cry2 | Cryptochrome-2 | Mus musculus (Mouse) | PR |
| Q923I8 | Cry2 | Cryptochrome-2 | Rattus norvegicus (Rat) | PR |
| Q96524 | CRY2 | Cryptochrome-2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| O48652 | UVR3 | (6-4)DNA photolyase | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDAAATAATA | TAAAAMVWFR | KGLRVHDNPA | LDAARRGGAA | ARLYPVFVLD | PRYLRPDQAA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PSPGSARAGV | ARVRFLLESL | SDLDARLRRL | GSRLLLLRAR | DDGDVAGTVC | AALKDWNIGK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LCFESDTEPY | ALARDKKVMD | FAAASGIDVF | SPVSHTLFDP | AEIIEKNGGR | PPMTYQSFVA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IAGEPPEPIM | EEYSELPPVG | DTGEYELLPV | PRVEELGYGD | ISQEDLSLFR | GGETEALKRM |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RESLHDKEWV | AKFEKPKGDP | SAFLKPATTV | LSPYLKFGCL | SSRYFYHCIQ | DIYRSTKKHT |
| 310 | 320 | 330 | 340 | 350 | 360 |
| NPPVSLTGQL | LWRDFFYTVA | FGTPNFDQMK | GNKICKQIPW | TENEELFPAW | RDGRTGYPWI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DAIMIQLRKW | GWMHHLARHS | VACFLTRGDL | FIHWEKGRDV | FERLLIDSDW | AINNGNWMWL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| SCSSFFYQYH | RIYSPTSFGK | KYDPNGNYIR | HFIPVLKDMP | KEYIYEPWTA | PLSIQKKANC |
| 490 | 500 | 510 | 520 | 530 | 540 |
| IIGKDYPKPV | VDHAIASKEC | KKMMGEAYAS | NRLDDDKPDK | GKSSNSSRRK | LSAGSQVTPN |
| 550 | |||||
| SSKTKQLKRS | S |