P56696
Gene name |
KCNQ4 |
Protein name |
Potassium voltage-gated channel subfamily KQT member 4 |
Names |
KQT-like 4, Potassium channel subunit alpha KvLQT4, Voltage-gated potassium channel subunit Kv7.4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9132 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
10 structures for P56696
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2OVC | X-ray | 207 A | A | 610-640 | PDB |
| 4GOW | X-ray | 260 A | A | 522-593 | PDB |
| 6N5W | X-ray | 215 A | PDB | ||
| 7BYL | EM | 250 A | A/C/E/G | 1-695 | PDB |
| 7BYM | EM | 310 A | A/C/E/G | 1-695 | PDB |
| 7BYN | EM | 330 A | A/C/E/G | 1-695 | PDB |
| 7VNP | EM | 279 A | A/C/E/G | 2-650 | PDB |
| 7VNQ | EM | 296 A | A/C/E/G | 2-650 | PDB |
| 7VNR | EM | 280 A | A/C/E/G | 2-650 | PDB |
| AF-P56696-F1 | Predicted | AlphaFoldDB |
588 variants for P56696
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000709614 CA339885140 rs1271250198 |
47 | L>P | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000006623 rs80358271 |
71 | Q>missing | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000006626 rs80358272 |
71 | Q>missing | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1553165199 RCV000655876 |
77 | H>missing | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000767381 rs1557977732 |
88 | Y>missing | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000155896 rs727504635 |
154 | A>missing | Rare genetic deafness [ClinVar] | Yes |
ClinVar dbSNP |
|
CA342051 RCV001521883 rs80358273 RCV002247375 RCV000655885 |
182 | F>L | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV002532721 rs367890569 RCV000763909 CA794594 RCV000603791 |
228 | G>C | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs797044965 RCV000655877 CA347371 |
230 | V>E | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA342055 rs80358274 RCV001794461 RCV000655886 |
260 | E>K | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000655887 rs80358275 CA342057 |
262 | D>V | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000722178 rs1558014576 CA339895616 |
266 | D>Y | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000484405 RCV000825943 rs797044966 RCV001089683 RCV000656422 |
269 | S>missing | Nonsyndromic genetic hearing loss Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
CA347351 RCV000655878 rs797044967 |
270 | Y>H | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000006625 rs80358276 VAR_010936 CA340538 |
274 | L>H | Autosomal dominant nonsyndromic hearing loss 2A DFNA2A [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000710319 CA21112664 rs956666801 RCV000599794 |
275 | W>C | Nonsyndromic genetic hearing loss [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000655879 CA347395 rs797044968 |
275 | W>R | Variant assessed as Somatic; impact. Autosomal dominant nonsyndromic hearing loss 2A [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
RCV000006620 rs80358277 RCV000211784 RCV001723546 CA340533 VAR_008726 |
276 | W>S | Autosomal dominant nonsyndromic hearing loss 2A Rare genetic deafness DFNA2A [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000155447 CA182793 RCV000763910 rs727504459 |
277 | G>R | Variant assessed as Somatic; impact. Autosomal dominant nonsyndromic hearing loss 2A [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar Ensembl NCI-TCGA dbSNP |
|
VAR_010937 RCV000006624 RCV001567939 CA340537 rs80358278 |
281 | L>S | Autosomal dominant nonsyndromic hearing loss 2A DFNA2A [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001851702 RCV000006622 CA340535 rs28937588 VAR_008727 |
285 | G>C | Autosomal dominant nonsyndromic hearing loss 2A DFNA2A; loss of potassium selectivity of the pore [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
CA340532 RCV000211722 RCV000006619 rs28937588 RCV002512841 VAR_001547 RCV000844633 |
285 | G>S | Nonsyndromic genetic hearing loss Autosomal dominant nonsyndromic hearing loss 2A Rare genetic deafness DFNA2A; dominant negative effect; abolishes potassium current [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_065779 CA233197 rs137853969 RCV000056155 RCV000144421 |
287 | G>R | Autosomal dominant nonsyndromic hearing loss 2A DFNA2A [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001258340 rs137853969 |
287 | G>S | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002510811 CA347354 rs797044970 RCV000655881 |
291 | P>L | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000655880 CA347413 rs797044969 |
291 | P>S | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs80358279 RCV000006627 CA340540 |
296 | G>S | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000655882 RCV001762405 CA347397 rs797044971 |
297 | R>S | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA340534 rs28939710 VAR_008728 RCV000006621 RCV002512842 RCV001195307 |
321 | G>S | Autosomal dominant nonsyndromic hearing loss 2A Rare genetic deafness DFNA2A [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
rs797044972 RCV000655883 |
349 | A>P | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000728415 rs374078257 RCV002533094 CA794818 |
420 | R>Q | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs34287852 RCV001001541 VAR_058971 CA135528 RCV000038243 RCV002054690 |
455 | H>Q | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs748693577 RCV001334313 CA794928 |
522 | T>M | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001354150 RCV001267187 rs759364617 CA794934 |
527 | M>L | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000604071 rs1553168601 |
558 | V>missing | Rare genetic deafness [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001265837 rs1648848951 |
623 | E>Q | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002514082 RCV000655884 CA347366 rs772135867 |
680 | S>F | Autosomal dominant nonsyndromic hearing loss 2A [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA339884733 rs1359438636 |
2 | A>T | No |
ClinGen TOPMed |
|
|
rs1422496526 CA339884800 |
5 | P>L | No |
ClinGen TOPMed |
|
|
rs1427513839 CA339884789 |
5 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339884809 rs1478347910 |
6 | P>Q | No |
ClinGen TOPMed |
|
|
CA339884816 rs1248234130 |
7 | R>H | No |
ClinGen TOPMed |
|
|
CA339884868 rs1374479325 |
10 | G>A | No |
ClinGen gnomAD |
|
|
CA339884861 rs1170668900 |
10 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1170668900 CA339884859 |
10 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs777816150 CA794439 |
12 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA21089000 rs1013934456 |
14 | P>L | No |
ClinGen TOPMed |
|
|
CA339884942 rs1369988851 |
15 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339884947 rs1278081268 |
16 | G>A | No |
ClinGen TOPMed |
|
|
CA339884945 rs1345793795 |
16 | G>R | No |
ClinGen TOPMed |
|
|
rs1347676173 CA339884960 |
18 | A>D | No |
ClinGen TOPMed |
|
|
rs1570792829 CA339884964 |
19 | P>S | No |
ClinGen Ensembl |
|
|
CA339884971 rs1268949306 |
20 | R>G | No |
ClinGen TOPMed |
|
|
rs1406640097 CA339884989 |
23 | L>I | No |
ClinGen gnomAD |
|
|
CA21089019 rs905612913 |
24 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs770609353 CA794442 |
24 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1001249688 CA21089024 |
27 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1489227328 CA339885018 |
28 | A>D | No |
ClinGen gnomAD |
|
|
CA339885023 rs1267031417 |
29 | V>L | No |
ClinGen gnomAD |
|
|
rs1267031417 CA339885021 |
29 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 30 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339885036 rs1414546484 |
31 | S>G | No |
ClinGen TOPMed |
|
|
CA339885041 rs1221693614 |
31 | S>R | No |
ClinGen gnomAD |
|
|
CA21089030 rs951855489 |
31 | S>T | No |
ClinGen TOPMed |
|
|
rs1190970191 CA339885056 |
33 | Q>H | No |
ClinGen gnomAD |
|
|
CA339885058 rs1391299157 |
34 | G>S | No |
ClinGen gnomAD |
|
|
rs1477347932 CA339885075 |
36 | A>G | No |
ClinGen TOPMed |
|
|
rs983796218 CA21089031 |
37 | G>D | No |
ClinGen TOPMed |
|
|
CA339885094 rs1237127362 |
39 | G>D | No |
ClinGen TOPMed |
|
|
CA339885097 rs1293159738 |
40 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA339885098 rs1392633092 |
40 | G>D | No |
ClinGen gnomAD |
|
|
rs1570792978 CA339885114 |
43 | R>G | No |
ClinGen Ensembl |
|
|
CA339885121 rs1299603082 |
44 | R>C | No |
ClinGen gnomAD |
|
|
CA794443 rs774239825 |
46 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA339885138 rs1271456210 |
47 | L>F | No |
ClinGen TOPMed |
|
|
rs1213935398 CA339885145 |
48 | L>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1319010068 CA339885149 |
49 | G>S | No |
ClinGen TOPMed |
|
|
rs1553165192 CA339885156 RCV000601653 |
50 | S>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1557977267 CA339885162 |
51 | P>S | No |
ClinGen Ensembl |
|
|
CA339885169 rs1323003883 |
52 | L>Q | No |
ClinGen gnomAD |
|
|
CA339885168 rs1292743227 |
52 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1272131400 CA339885174 |
53 | P>S | No |
ClinGen gnomAD |
|
|
rs1014828055 CA21089054 |
54 | P>L | No |
ClinGen TOPMed |
|
|
rs1448058512 CA339885196 |
57 | P>A | No |
ClinGen TOPMed |
|
|
rs759465970 CA794444 |
58 | L>F | No |
ClinGen ExAC gnomAD |
|
|
RCV000905703 rs775420649 CA794446 |
59 | P>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs772056095 CA794445 |
59 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA339885210 rs1465095912 |
60 | G>R | No |
ClinGen TOPMed |
|
|
CA794449 rs763627695 |
61 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763627695 CA339885220 |
61 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753386618 CA794450 |
62 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA339885221 rs1459048560 |
62 | G>S | No |
ClinGen gnomAD |
|
|
rs761578330 CA794451 |
63 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794453 rs752032294 |
65 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752032294 CA794454 |
65 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756211540 CA794457 |
68 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs749439118 CA794459 |
70 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794460 rs771251584 |
71 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs778559114 CA794461 |
72 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA339885284 rs1483888972 |
73 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1181316883 CA339885286 |
73 | S>Y | No |
ClinGen gnomAD |
|
|
rs745605543 CA794462 |
74 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794464 rs775367552 |
75 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339885297 rs1411591349 |
75 | A>V | No |
ClinGen gnomAD |
|
|
rs1156726710 CA339885299 |
76 | A>T | No |
ClinGen gnomAD |
|
|
CA339885309 rs1311685113 |
77 | H>R | No |
ClinGen gnomAD |
|
|
rs1353027537 CA339885317 |
78 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1411196713 CA339885323 |
79 | R>C | No |
ClinGen gnomAD |
|
|
CA794467 rs760630974 |
81 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs768031914 CA794468 |
81 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA339885335 rs760630974 |
81 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA794469 rs776248740 |
82 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339885341 rs1313245293 |
82 | R>H | No |
ClinGen gnomAD |
|
|
rs776248740 CA339885339 |
82 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772740345 CA794472 |
85 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759935456 CA794473 |
86 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759935456 CA339885364 |
86 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs4440844 CA794474 |
87 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA339885380 rs1429420446 |
88 | Y>H | No |
ClinGen gnomAD |
|
|
rs1427026923 CA339885386 |
89 | N>D | No |
ClinGen gnomAD |
|
|
CA339885392 rs1470693740 |
89 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA339885420 rs1414906231 |
94 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 95 | R>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs892642305 CA21089222 |
95 | R>G | No |
ClinGen Ensembl |
|
|
rs1172931093 CA339885431 |
96 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA339885430 rs1172931093 |
96 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs756724790 CA794477 |
98 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1431085697 CA339885448 |
98 | A>V | No |
ClinGen gnomAD |
|
|
CA339885455 CA21089238 rs946751290 |
99 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs764074937 CA794478 |
100 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA339885466 rs1557977849 |
101 | Y>F | No |
ClinGen Ensembl |
|
|
CA339885474 rs1368754307 |
102 | H>L | No |
ClinGen gnomAD |
|
|
rs1234099873 CA339885475 |
102 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs779125798 CA794481 |
103 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA339885477 rs1301861512 |
103 | V>I | No |
ClinGen gnomAD |
|
|
rs866433910 CA21089276 |
104 | F>L | No |
ClinGen Ensembl |
|
|
rs201467006 CA794482 CA794483 |
105 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 105 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA21089309 rs201467006 |
105 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794505 rs189892658 |
106 | F>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 107 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA794506 rs781140586 |
109 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748054545 CA794507 |
110 | F>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 119 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770763842 CA794512 |
120 | T>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA339893123 rs1206186130 |
121 | I>T | No |
ClinGen TOPMed |
|
|
CA339893135 rs1489698141 |
122 | Q>* | No |
ClinGen gnomAD |
|
|
CA21111520 rs563132684 |
122 | Q>R | No |
ClinGen TOPMed |
|
|
rs968190941 CA21111523 |
124 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs978378861 CA21111527 |
128 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
RCV000601665 rs761034165 CA794514 |
129 | N>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1231704605 CA339893285 |
130 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs768933585 CA794515 |
133 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1330941518 CA339893331 |
133 | L>H | No |
ClinGen gnomAD |
|
|
CA21111889 rs267598596 |
136 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1259956754 CA339893532 |
137 | F>S | No |
ClinGen gnomAD |
|
|
CA339893539 rs1202119766 |
138 | V>M | No |
ClinGen gnomAD |
|
|
rs200053059 CA794537 |
140 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339893569 rs1281035238 |
140 | I>V | No |
ClinGen gnomAD |
|
|
rs766465736 CA794539 |
141 | V>E | No |
ClinGen ExAC gnomAD |
|
|
rs1415418857 CA339893628 |
144 | G>V | No |
ClinGen TOPMed |
|
|
rs1558012434 CA339893664 |
147 | Y>S | No |
ClinGen Ensembl |
|
|
rs767337917 CA21111909 |
148 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339893675 rs767337917 |
148 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752503566 CA21111911 |
148 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794541 rs767337917 |
148 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339893697 rs1174806620 |
149 | V>D | No |
ClinGen gnomAD |
|
|
rs755979378 CA794543 |
149 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339893689 rs755979378 |
149 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794544 rs753849216 |
157 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA794545 rs756787790 |
158 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA339893830 rs1397429647 |
159 | R>C | No |
ClinGen gnomAD |
|
|
CA339893850 rs1391059122 |
160 | Y>* | No |
ClinGen gnomAD |
|
| TCGA novel | 165 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1235217843 CA339893922 |
166 | R>G | No |
ClinGen gnomAD |
|
|
CA339893927 rs1282247264 |
166 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA339893952 rs1201758120 |
168 | R>G | No |
ClinGen gnomAD |
|
|
CA21111934 rs778605247 |
170 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs778605247 CA794547 |
170 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs745510596 CA794548 |
175 | C>W | No |
ClinGen ExAC gnomAD |
|
|
CA794549 rs758042746 |
177 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1462187233 COSM2156910 CA339894173 |
178 | D>G | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA339894200 rs1392206315 |
180 | I>F | No |
ClinGen TOPMed |
|
|
CA339894203 rs1333939175 |
180 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA794572 rs555787223 |
183 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339894237 rs555787223 |
183 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 184 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1245620722 CA339894272 |
185 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1245620722 CA339894273 |
185 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
rs771497907 CA794573 |
186 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1233538482 CA339894356 |
191 | A>P | No |
ClinGen gnomAD |
|
|
CA21112110 rs900346633 |
192 | G>R | No |
ClinGen Ensembl |
|
|
CA339894400 rs772216624 |
193 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772216624 CA794576 |
193 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1243168865 CA339894407 |
194 | Q>* | No |
ClinGen gnomAD |
|
|
CA794578 rs761017267 |
195 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339894433 rs1184807552 |
195 | G>S | No |
ClinGen gnomAD |
|
|
rs373711753 CA794579 |
196 | N>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776623615 CA794580 |
197 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs761834841 CA794581 |
199 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1161064765 CA339894501 |
200 | T>A | No |
ClinGen gnomAD |
|
|
rs765015347 CA794582 |
200 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs1286549624 CA339894523 |
202 | A>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 204 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 204 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339894557 rs1316190627 |
206 | M>V | No |
ClinGen gnomAD |
|
|
rs1353222298 CA339894574 |
207 | R>H | No |
ClinGen gnomAD |
|
|
rs750383779 CA794583 |
207 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1225792086 CA339894582 |
208 | F>V | No |
ClinGen gnomAD |
|
|
rs765957601 CA794585 |
212 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339894640 rs1214286132 |
213 | R>H | No |
ClinGen gnomAD |
|
|
CA339894637 rs1214286132 |
213 | R>P | No |
ClinGen gnomAD |
|
|
CA339894651 rs1255626878 |
214 | M>I | No |
ClinGen gnomAD |
|
|
rs896684196 CA21112162 |
214 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1210326331 CA339894648 |
214 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs896684196 CA339894643 |
214 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1030508186 CA21112166 |
215 | V>A | No |
ClinGen Ensembl |
|
|
rs1178671679 CA339894671 |
216 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1418359605 CA339894675 |
217 | M>V | No |
ClinGen gnomAD |
|
|
CA339894686 rs1156831243 |
218 | D>N | No |
ClinGen gnomAD |
|
|
rs1570829586 CA339894693 |
218 | D>V | No |
ClinGen Ensembl |
|
|
rs754687083 CA794586 |
219 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778109027 CA794587 |
219 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA339894717 rs1424247609 |
220 | R>L | No |
ClinGen TOPMed |
|
|
rs1311781374 CA339894718 |
221 | G>S | No |
ClinGen gnomAD |
|
|
CA794590 rs752658856 |
222 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757655218 CA794589 |
222 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs746418206 CA794591 |
223 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 228 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1016512710 CA21112232 |
229 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339894823 rs761640389 |
231 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA794597 rs761640389 |
231 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA339894817 rs1205492134 |
231 | V>I | No |
ClinGen gnomAD |
|
|
rs371645760 CA339894834 |
232 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 232 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772979020 CA794599 |
233 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA16617142 RCV000486052 rs1064796365 |
234 | H>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA339895353 rs1161868447 |
241 | A>T | No |
ClinGen gnomAD |
|
|
rs755065456 CA794628 |
245 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794630 rs375203388 |
246 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs756428861 CA794631 |
249 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA21112602 RCV000825355 rs1000705787 |
251 | F>L | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs1011944551 CA21112605 |
252 | A>T | No |
ClinGen Ensembl |
|
|
rs1282231132 CA339895483 |
253 | S>C | No |
ClinGen gnomAD |
|
|
rs1404474371 CA339895491 |
254 | F>C | No |
ClinGen gnomAD |
|
|
rs1452581149 CA339895525 |
257 | Y>C | No |
ClinGen gnomAD |
|
|
rs1558014555 CA339895584 |
263 | A>T | No |
ClinGen Ensembl |
|
|
rs745846744 CA794635 |
264 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339895599 rs745846744 |
264 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794636 rs771549225 |
269 | S>F | No |
ClinGen ExAC gnomAD |
|
| rs797044966 | 269 | S>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1558014631 CA339895669 |
271 | A>V | No |
ClinGen Ensembl |
|
|
rs763733527 CA794639 |
273 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1057518095 RCV000412910 CA16042364 |
275 | W>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV000613818 CA794642 rs763326539 |
278 | T>A | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA339895808 rs55737429 |
281 | L>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1558015500 RCV000729026 CA339895843 |
284 | I>N | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV000220056 rs876657841 CA10576424 |
286 | Y>C | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 287 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1169627230 CA339895960 |
295 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA794673 rs747802819 |
297 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA339895988 rs1570832367 |
298 | V>G | No |
ClinGen Ensembl |
|
|
CA339896005 rs1349442501 |
300 | A>G | No |
ClinGen TOPMed |
|
|
rs1328982761 CA339896010 |
301 | A>P | No |
ClinGen TOPMed |
|
|
CA794676 rs773015201 |
303 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772355179 CA339896039 |
304 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772355179 CA794677 |
304 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339896058 rs906164330 |
306 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA21113068 rs1002048420 |
308 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 309 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339896231 rs1308296992 |
319 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA339896272 rs1237984540 |
323 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 327 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339896312 rs1209671583 |
327 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1209671583 CA339896315 |
327 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1236007519 CA339896331 |
328 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs748935852 CA794711 |
329 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1408578386 CA339896364 |
331 | R>Q | No |
ClinGen gnomAD |
|
|
rs1178772384 CA339896359 |
331 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA339896367 rs1439034534 |
332 | Q>E | No |
ClinGen gnomAD |
|
|
rs973320083 CA21113263 |
333 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA794713 rs778631219 |
336 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs191761250 CA794714 |
338 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769086004 CA794715 RCV000602073 |
339 | R>S | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA339896500 rs1376733025 |
344 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA339896508 rs568125894 |
344 | N>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1306354092 CA339896513 |
345 | L>F | No |
ClinGen gnomAD |
|
|
rs769840355 CA794718 |
346 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1413075576 CA339896954 |
348 | A>V | No |
ClinGen TOPMed |
|
|
CA794746 rs760552579 |
349 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1167593525 RCV001195499 |
351 | R>C | No |
ClinVar dbSNP |
|
|
rs764064113 CA794747 |
351 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339896981 rs1167593525 |
351 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1416600952 CA339896991 |
352 | L>M | No |
ClinGen TOPMed |
|
|
CA339897016 rs1570835579 |
353 | Y>S | No |
ClinGen Ensembl |
|
|
CA339897049 rs1347035442 |
356 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs750018672 CA794751 |
357 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs764841987 CA794750 |
357 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs781530919 CA794753 |
359 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758101117 CA794752 |
359 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 360 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1001797721 CA21114878 |
364 | A>G | No |
ClinGen TOPMed |
|
|
CA794755 rs756495387 |
364 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1287707773 CA339897152 |
365 | T>S | No |
ClinGen gnomAD |
|
|
CA794756 rs575565145 |
366 | W>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1261975746 CA339897186 |
368 | Y>F | No |
ClinGen gnomAD |
|
|
CA21114892 rs1034909303 |
368 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA794757 rs374483854 |
370 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 371 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA794758 rs770897499 |
372 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794760 rs746073761 |
373 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA339897890 rs1170528770 |
379 | L>P | No |
ClinGen gnomAD |
|
|
CA21116193 rs563771503 |
380 | A>D | No |
ClinGen 1000Genomes |
|
|
CA339897907 rs1402193029 |
381 | L>F | No |
ClinGen gnomAD |
|
|
rs910835263 CA339897913 |
381 | L>P | No |
ClinGen gnomAD |
|
|
rs910835263 CA21116194 |
381 | L>R | No |
ClinGen gnomAD |
|
|
rs1243410602 CA339897934 |
383 | F>I | No |
ClinGen gnomAD |
|
|
CA339897963 rs1375791689 |
385 | H>Y | No |
ClinGen TOPMed |
|
|
rs1301376340 CA339897971 |
386 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs976622606 CA21116201 |
388 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
RCV000150877 CA176473 rs371079509 |
388 | R>W | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA339897989 rs1458459083 |
389 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA21116205 rs923438571 |
389 | A>V | No |
ClinGen gnomAD |
|
|
CA794790 rs557161892 |
390 | R>C | No |
ClinGen ExAC |
|
|
CA21116222 rs529372797 |
390 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs776543310 CA794791 |
391 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1256669515 CA339898000 |
391 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339898007 rs1470240977 |
392 | G>E | No |
ClinGen gnomAD |
|
|
CA339898010 rs1266771613 |
393 | G>S | No |
ClinGen gnomAD |
|
|
CA794794 rs773034045 |
395 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs373405864 CA794793 |
395 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1169737103 CA339898028 |
396 | P>L | No |
ClinGen gnomAD |
|
|
rs904001184 CA21116256 |
396 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs773975779 RCV000216240 CA794796 RCV001853455 |
398 | E>G | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA794797 rs370066980 |
399 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA794798 rs764363403 |
400 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000807343 CA339898047 rs1239252987 |
400 | R>W | No |
ClinGen ClinVar dbSNP gnomAD |
|
| TCGA novel | 401 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs551509351 CA794800 |
401 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754165873 CA794799 RCV000215857 |
401 | R>W | Variant assessed as Somatic; 6.411e-05 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs201832976 CA21116284 |
402 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs201832976 CA339898057 |
402 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs887762794 CA21116292 |
403 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA339898075 rs1487533992 |
405 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339898076 rs1264123218 RCV000608225 |
406 | D>N | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA794805 rs367922521 |
407 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755290873 CA794806 |
409 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA21116338 rs912699149 |
410 | S>P | No |
ClinGen Ensembl |
|
|
rs199809248 CA794807 RCV000880573 RCV000825178 |
411 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs373727071 CA794808 |
411 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339898105 rs199809248 |
411 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA794810 rs773106573 |
412 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1399019578 CA339898120 |
413 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs749277116 CA794811 |
413 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA794815 rs767141905 |
415 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339898138 rs555850253 |
417 | T>A | No |
ClinGen 1000Genomes gnomAD |
|
|
CA339898142 rs1242348221 |
417 | T>I | No |
ClinGen gnomAD |
|
|
CA21116377 rs555850253 |
417 | T>P | No |
ClinGen 1000Genomes gnomAD |
|
|
rs576041348 CA794817 |
420 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA794819 rs750942862 |
421 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs750942862 CA339898165 |
421 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA339898169 rs1255322959 |
422 | G>D | No |
ClinGen gnomAD |
|
|
CA794820 rs766559631 |
422 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA794821 rs368294870 |
423 | S>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA176477 RCV000150879 rs368294870 |
423 | S>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs781424101 CA794822 |
425 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339898188 rs1418629691 |
425 | S>F | No |
ClinGen gnomAD |
|
|
CA794825 rs777606986 |
427 | C>F | No |
ClinGen ExAC gnomAD |
|
|
RCV001195500 rs932108929 CA21116425 |
428 | P>L | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA794826 rs749223967 |
428 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749223967 CA339898204 |
428 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339898208 rs1377532661 |
429 | G>R | No |
ClinGen gnomAD |
|
|
CA794827 rs572530099 |
430 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778836515 CA794828 |
431 | S>R | No |
ClinGen ExAC |
|
|
rs559233008 CA794857 |
433 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA21083140 rs559233008 |
433 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA794856 RCV000519363 COSM1211637 rs760023398 |
433 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs1240213228 CA339885898 |
434 | M>I | No |
ClinGen TOPMed |
|
|
rs1284818966 CA339885908 |
435 | G>D | No |
ClinGen gnomAD |
|
|
rs1348125794 CA339885924 |
437 | K>Q | No |
ClinGen gnomAD |
|
|
CA339885944 rs1570847595 |
438 | D>A | No |
ClinGen Ensembl |
|
|
rs145573794 CA794858 |
439 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA794859 rs760822719 |
439 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs764251838 CA794860 |
441 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794861 rs201271940 |
441 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339885975 rs201271940 |
441 | R>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs368850546 CA794863 |
442 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339885977 CA339885979 rs757017689 |
442 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs142453905 RCV000150880 RCV002055976 CA176479 |
442 | M>T | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA794862 rs757017689 |
442 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA339886013 rs1479131172 |
445 | S>F | No |
ClinGen gnomAD |
|
|
CA794865 rs780044343 |
447 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794864 rs758333323 |
447 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754553567 CA794867 |
448 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794866 rs535365858 |
448 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1570847758 CA339886065 |
449 | T>A | No |
ClinGen Ensembl |
|
|
rs371267877 CA794868 |
449 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339886084 rs1270002554 |
450 | G>S | No |
ClinGen TOPMed |
|
|
CA339886095 rs1570847799 |
450 | G>V | No |
ClinGen Ensembl |
|
|
rs1333561378 CA339886111 |
451 | P>L | No |
ClinGen gnomAD |
|
|
CA339886133 rs1234960574 |
453 | K>Q | No |
ClinGen gnomAD |
|
|
rs1275135978 CA339886140 |
453 | K>R | No |
ClinGen gnomAD |
|
|
CA794871 rs774648480 |
454 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA794872 rs746252542 |
455 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA339886175 rs1202201690 |
455 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs776087577 CA794873 |
457 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339886237 rs1010168019 |
458 | P>S | No |
ClinGen gnomAD |
|
|
RCV000492993 CA21083207 rs1010168019 |
458 | P>T | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs1435038472 CA339886260 |
459 | P>R | No |
ClinGen gnomAD |
|
|
CA21083209 rs923094535 |
460 | T>A | No |
ClinGen TOPMed |
|
|
rs1199822160 CA339886309 |
461 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA339886359 rs1570847990 |
463 | T>I | No |
ClinGen Ensembl |
|
|
CA339886345 rs1570847982 |
463 | T>P | No |
ClinGen Ensembl |
|
|
rs144177723 CA794874 |
465 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs764200624 CA794875 |
466 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA339886433 rs1466083610 |
467 | S>N | No |
ClinGen gnomAD |
|
|
CA794877 rs574794136 |
468 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1388047985 CA339886488 |
469 | Q>* | No |
ClinGen gnomAD |
|
|
CA339886495 rs1285008072 |
469 | Q>H | No |
ClinGen TOPMed |
|
|
RCV000600694 rs1553168273 CA339886491 |
469 | Q>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA794878 rs765075433 |
470 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 472 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs758221510 CA794880 |
474 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21083263 rs1029196029 |
475 | S>R | No |
ClinGen Ensembl |
|
|
CA794882 rs148048793 |
477 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1384079140 CA339886652 |
477 | T>S | No |
ClinGen TOPMed |
|
|
CA339886671 rs1570848170 |
478 | K>M | No |
ClinGen Ensembl |
|
|
rs1302331932 CA339886677 |
479 | V>L | No |
ClinGen TOPMed |
|
|
RCV001215415 rs1648636515 |
480 | Q>* | No |
ClinVar dbSNP |
|
|
rs1156621502 CA339886750 |
483 | W>C | No |
ClinGen gnomAD |
|
|
CA794883 rs368785566 |
486 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339886812 rs1467055723 |
486 | N>Y | No |
ClinGen TOPMed |
|
|
rs557521797 CA794885 |
488 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA794886 rs371301199 |
488 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs557521797 CA794884 |
488 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA21083293 rs373652215 |
489 | T>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
COSM325594 CA794888 rs746170447 |
490 | R>C | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA794889 rs772518738 |
490 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339886860 rs1169633047 |
491 | F>Y | No |
ClinGen gnomAD |
|
|
CA794890 rs775830606 |
492 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000260190 CA794891 rs775830606 |
492 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA339886865 rs1371296507 |
492 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs768707518 CA794892 |
493 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA21083318 rs577314845 |
496 | R>G | No |
ClinGen 1000Genomes |
|
|
CA339886896 rs1402714730 |
497 | L>F | No |
ClinGen gnomAD |
|
|
CA339886920 rs1299717259 |
499 | P>L | No |
ClinGen gnomAD |
|
|
CA794893 rs776756980 |
500 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794894 rs776756980 |
500 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201025485 CA794895 |
500 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA794896 rs200391496 |
501 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1362768846 CA339886932 |
501 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1245539500 CA339886988 |
504 | E>A | No |
ClinGen gnomAD |
|
|
rs1291139157 CA339887003 |
505 | D>N | No |
ClinGen gnomAD |
|
|
CA794920 RCV000615810 rs145732892 |
506 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA339887310 rs1222267031 |
507 | P>S | No |
ClinGen gnomAD |
|
|
rs1204094308 CA339887513 |
510 | E>* | No |
ClinGen gnomAD |
|
|
CA794924 RCV002519633 rs778538229 RCV000219909 |
511 | V>I | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA794925 rs751860374 |
516 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA794926 rs755354484 |
516 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs781634436 CA794927 |
519 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs777964870 CA794930 |
523 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794932 rs771129024 |
525 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794933 rs774736966 |
526 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1353988025 CA339887728 |
527 | M>I | No |
ClinGen gnomAD |
|
|
rs772037173 CA794935 |
529 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA21084654 rs1012161949 |
535 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA339887818 rs1282404548 |
535 | R>H | No |
ClinGen gnomAD |
|
|
CA10576426 rs876657837 RCV000223631 |
537 | I>M | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA21084669 rs878984824 |
537 | I>V | No |
ClinGen Ensembl |
|
|
rs1385928018 CA339887941 |
538 | R>S | No |
ClinGen gnomAD |
|
|
CA794937 rs760726620 |
538 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs772827842 CA794961 |
539 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs577823810 CA21085972 |
545 | A>T | No |
ClinGen 1000Genomes |
|
|
CA339888110 rs1362729181 |
549 | F>L | No |
ClinGen gnomAD |
|
|
CA339888124 rs1421240079 |
550 | K>R | No |
ClinGen gnomAD |
|
|
rs376909924 CA21085992 |
554 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376909924 CA794964 |
554 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1168592136 CA339888165 |
554 | R>Q | No |
ClinGen TOPMed |
|
|
CA794966 COSM188029 rs764622728 |
555 | P>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs140945833 CA794969 |
556 | Y>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs979197528 CA21086029 |
556 | Y>C | No |
ClinGen TOPMed |
|
|
CA339888198 rs1410332157 |
557 | D>Y | No |
ClinGen Ensembl |
|
|
CA339888214 rs746765804 |
558 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA794971 COSM1290196 rs746765804 |
558 | V>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs370248473 CA21086057 |
561 | V>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1241069895 CA339888541 |
568 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1212832238 CA339888569 |
569 | H>R | No |
ClinGen gnomAD |
|
|
CA339888606 rs1285069953 |
570 | L>V | No |
ClinGen TOPMed |
|
|
CA339889167 rs1181851856 |
575 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1444049079 CA339889163 |
575 | R>W | No |
ClinGen gnomAD |
|
|
rs770523151 CA794978 |
582 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1470631042 CA339889346 |
582 | R>W | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 586 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1248614084 CA339889748 |
588 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM3805219 CA339889752 rs1570856786 |
589 | R>W | breast [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA339889761 rs1304409022 |
590 | G>V | No |
ClinGen TOPMed |
|
|
CA339889769 CA339889770 COSM1342648 rs1200500779 |
592 | G>R | Variant assessed as Somatic; 4.781e-05 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated gnomAD NCI-TCGA |
|
CA795002 rs765786785 |
594 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1374755627 CA339889804 |
597 | R>L | No |
ClinGen gnomAD |
|
|
CA795004 rs763090770 |
597 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA339889818 rs1462010485 |
599 | K>R | No |
ClinGen gnomAD |
|
|
CA795005 rs766417494 |
600 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA10576427 rs876657838 RCV000216652 |
601 | D>Y | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs751793378 CA795006 |
602 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA795007 rs755220278 |
603 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA339889843 rs1345234931 |
603 | G>V | No |
ClinGen gnomAD |
|
|
rs781479643 CA795008 |
605 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs139835231 CA339889861 RCV000150882 RCV000884280 CA176483 |
606 | D>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs938608196 CA21088085 |
606 | D>N | No |
ClinGen gnomAD |
|
|
CA795009 rs373302459 |
606 | D>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1480502533 CA339889862 |
607 | A>T | No |
ClinGen TOPMed |
|
|
CA339889880 rs1318454720 |
609 | V>A | No |
ClinGen gnomAD |
|
|
rs777656364 CA795011 |
610 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA795010 rs777656364 |
610 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA795012 rs770464964 |
611 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 611 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1053997001 CA21088132 |
612 | E>D | No |
ClinGen TOPMed |
|
|
CA795013 rs778358686 |
613 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339889923 rs1319441480 |
614 | S>G | No |
ClinGen TOPMed |
|
|
rs183328763 CA795015 |
616 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339889961 rs1570857057 |
616 | M>L | No |
ClinGen Ensembl |
|
| TCGA novel | 618 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1370815453 CA339890025 |
619 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1426047424 CA339890098 |
622 | V>L | No |
ClinGen gnomAD |
|
|
rs1426047424 CA339890093 |
622 | V>M | No |
ClinGen gnomAD |
|
|
rs1157394287 CA339890325 |
627 | Q>* | No |
ClinGen gnomAD |
|
|
rs1247386832 CA339890389 |
630 | E>Q | No |
ClinGen TOPMed |
|
|
rs989457720 CA21088584 |
631 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1403978262 CA339890470 |
634 | D>Y | No |
ClinGen gnomAD |
|
|
CA339890491 rs563325444 |
635 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA795041 rs563325444 |
635 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1335295382 CA339890530 |
637 | L>F | No |
ClinGen gnomAD |
|
|
rs1414200298 CA339890524 |
637 | L>S | No |
ClinGen gnomAD |
|
|
rs759506278 CA795042 |
638 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs759506278 CA339890546 |
638 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA339890635 rs1356285680 |
641 | S>* | No |
ClinGen TOPMed |
|
|
rs1325491212 CA339890658 |
642 | R>L | No |
ClinGen gnomAD |
|
|
CA339890679 rs1311054891 COSM535212 |
643 | C>F | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA339890712 rs1428248589 |
645 | R>H | No |
ClinGen gnomAD |
|
|
CA339890766 rs1262477201 |
649 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs982728141 CA21088641 |
650 | A>S | No |
ClinGen TOPMed |
|
|
CA185147 RCV000156592 rs727505133 |
652 | L>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
RCV000220330 rs876657839 CA10576428 |
653 | G>S | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1309895147 CA339890838 |
653 | G>V | No |
ClinGen gnomAD |
|
|
rs1480110676 CA339890878 |
655 | V>A | No |
ClinGen gnomAD |
|
|
rs764309008 CA795046 |
655 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21088666 rs960662188 |
657 | V>A | No |
ClinGen gnomAD |
|
|
CA795048 COSM3689693 rs757100858 |
657 | V>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA795049 rs374409211 |
658 | P>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
rs991100263 CA21088670 |
658 | P>S | No |
ClinGen TOPMed |
|
|
rs757820200 CA795051 |
659 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339891062 rs1362192848 |
660 | F>L | No |
ClinGen TOPMed |
|
|
CA339891064 rs1171470293 |
661 | D>N | No |
ClinGen TOPMed |
|
|
rs941726067 CA21088699 |
663 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
rs746654848 CA795053 |
663 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339891118 rs941726067 |
663 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1263179330 CA339891130 |
664 | I>V | No |
ClinGen TOPMed |
|
|
CA21088704 rs913125224 |
665 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339891186 rs1282504981 |
667 | D>A | No |
ClinGen gnomAD |
|
|
CA339891204 rs1278668958 |
668 | Y>C | No |
ClinGen TOPMed |
|
|
CA795056 rs781002955 |
668 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000217792 rs749565877 CA795057 RCV002262808 |
669 | H>R | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA21088727 rs897614842 |
670 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs754076761 CA795058 |
672 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339891343 rs1202563907 |
675 | E>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 676 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746444992 CA795060 |
678 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA21088746 rs931749137 |
683 | T>K | No |
ClinGen gnomAD |
|
|
CA21088748 rs566247637 |
685 | S>G | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1165663726 CA339891579 |
686 | I>V | No |
ClinGen gnomAD |
|
|
CA795063 rs528812659 |
687 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776946822 CA795064 |
688 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs776946822 CA339891617 |
688 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA795065 rs761479115 |
688 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs761479115 CA795066 |
688 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA795067 rs761479115 |
688 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA339891647 rs777429489 |
689 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA795068 rs777429489 |
689 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754555626 CA795071 |
690 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200757822 CA795072 |
691 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA795073 rs568378556 |
693 | N>S | No |
ClinGen 1000Genomes ExAC |
|
|
rs1316637735 CA339891722 |
693 | N>Y | No |
ClinGen gnomAD |
|
|
CA339891754 rs1359711459 |
694 | M>T | No |
ClinGen gnomAD |
|
|
CA339891781 rs1221362623 |
695 | D>G | No |
ClinGen gnomAD |
|
|
rs1422986789 CA339891770 |
695 | D>N | No |
ClinGen TOPMed |
|
|
rs757548541 CA795074 |
696 | D>C | No |
ClinGen ExAC gnomAD |
|
|
RCV000487526 CA16621562 rs748770400 |
696 | D>G | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs748770400 CA21088804 |
696 | D>R | No |
ClinGen TOPMed |
1 associated diseases with P56696
[MIM: 600101]: Deafness, autosomal dominant, 2A (DFNA2A)
A form of non-syndromic sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. {ECO:0000269|PubMed:10025409, ECO:0000269|PubMed:10369879, ECO:0000269|PubMed:10571947, ECO:0000269|PubMed:10925378, ECO:0000269|PubMed:21242547}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A form of non-syndromic sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. {ECO:0000269|PubMed:10025409, ECO:0000269|PubMed:10369879, ECO:0000269|PubMed:10571947, ECO:0000269|PubMed:10925378, ECO:0000269|PubMed:21242547}. Note=The disease is caused by variants affecting the gene represented in this entry.
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| basal plasma membrane | The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| voltage-gated potassium channel complex | A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| calmodulin binding | Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
| delayed rectifier potassium channel activity | Enables the transmembrane transfer of a potassium ion by a delayed rectifying voltage-gated channel. A delayed rectifying current-voltage relation is one where channel activation kinetics are time-dependent, and inactivation is slow. |
| potassium channel activity | Enables the facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. |
| voltage-gated potassium channel activity | Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| inner ear morphogenesis | The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively. |
| potassium ion transmembrane transport | A process in which a potassium ion is transported from one side of a membrane to the other. |
| potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| regulation of ion transmembrane transport | Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. |
| sensory perception of sound | The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound. |
8 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P58126 | KCNQ3 | Potassium voltage-gated channel subfamily KQT member 3 | Bos taurus (Bovine) | PR |
| O43525 | KCNQ3 | Potassium voltage-gated channel subfamily KQT member 3 | Homo sapiens (Human) | PR |
| Q9JK45 | Kcnq5 | Potassium voltage-gated channel subfamily KQT member 5 | Mus musculus (Mouse) | PR |
| P97414 | Kcnq1 | Potassium voltage-gated channel subfamily KQT member 1 | Mus musculus (Mouse) | PR |
| Q8K3F6 | Kcnq3 | Potassium voltage-gated channel subfamily KQT member 3 | Mus musculus (Mouse) | PR |
| Q9JK97 | Kcnq4 | Potassium voltage-gated channel subfamily KQT member 4 | Mus musculus (Mouse) | PR |
| Q9JK96 | Kcnq4 | Potassium voltage-gated channel subfamily KQT member 4 | Rattus norvegicus (Rat) | PR |
| O88944 | Kcnq3 | Potassium voltage-gated channel subfamily KQT member 3 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAEAPPRRLG | LGPPPGDAPR | AELVALTAVQ | SEQGEAGGGG | SPRRLGLLGS | PLPPGAPLPG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PGSGSGSACG | QRSSAAHKRY | RRLQNWVYNV | LERPRGWAFV | YHVFIFLLVF | SCLVLSVLST |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IQEHQELANE | CLLILEFVMI | VVFGLEYIVR | VWSAGCCCRY | RGWQGRFRFA | RKPFCVIDFI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VFVASVAVIA | AGTQGNIFAT | SALRSMRFLQ | ILRMVRMDRR | GGTWKLLGSV | VYAHSKELIT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AWYIGFLVLI | FASFLVYLAE | KDANSDFSSY | ADSLWWGTIT | LTTIGYGDKT | PHTWLGRVLA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AGFALLGISF | FALPAGILGS | GFALKVQEQH | RQKHFEKRRM | PAANLIQAAW | RLYSTDMSRA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| YLTATWYYYD | SILPSFRELA | LLFEHVQRAR | NGGLRPLEVR | RAPVPDGAPS | RYPPVATCHR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| PGSTSFCPGE | SSRMGIKDRI | RMGSSQRRTG | PSKQHLAPPT | MPTSPSSEQV | GEATSPTKVQ |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KSWSFNDRTR | FRASLRLKPR | TSAEDAPSEE | VAEEKSYQCE | LTVDDIMPAV | KTVIRSIRIL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KFLVAKRKFK | ETLRPYDVKD | VIEQYSAGHL | DMLGRIKSLQ | TRVDQIVGRG | PGDRKAREKG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| DKGPSDAEVV | DEISMMGRVV | KVEKQVQSIE | HKLDLLLGFY | SRCLRSGTSA | SLGAVQVPLF |
| 670 | 680 | 690 | |||
| DPDITSDYHS | PVDHEDISVS | AQTLSISRSV | STNMD |