P51798
Gene name |
CLCN7 |
Protein name |
H(+)/Cl(-) exchange transporter 7 |
Names |
Chloride channel 7 alpha subunit, Chloride channel protein 7, ClC-7 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:1186 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
708 variants for P51798
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV002556582 RCV001120412 rs528173586 RCV001856579 CA276630045 |
44 | A>T | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes TOPMed dbSNP gnomAD |
|
RCV000050235 RCV000055847 CA264215 RCV000480176 rs387907576 |
99 | Y>C | Autosomal recessive osteopetrosis 4 Autosomal dominant osteopetrosis 2 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_064637 | 132 | L>P | OPTB4 [UniProt] | Yes | UniProt |
| VAR_075576 | 213 | L>F | OPTA2; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_064638 rs367567630 RCV000656495 CA7810682 |
214 | N>S | Autosomal recessive osteopetrosis 4 OPTB4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001781390 RCV001843355 VAR_020997 CA344955 rs397515539 |
215 | G>R | Autosomal dominant osteopetrosis 2 OPTA2 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_075577 | 224 | L>R | OPTB4; unknown pathological significance [UniProt] | Yes | UniProt |
|
VAR_064639 rs760209068 |
227 | L>missing | OPTB4 [UniProt] | Yes |
UniProt dbSNP |
|
VAR_064639 rs760209068 |
227 | L>del | OPTB4 [UniProt] | Yes |
UniProt dbSNP |
|
rs1360480518 CA394191202 VAR_020998 |
240 | G>R | OPTB4 [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP gnomAD |
| VAR_020999 | 249 | P>R | OPTB4 [UniProt] | Yes | UniProt |
|
CA118542 rs121434436 RCV000007268 VAR_037427 |
261 | I>F | Autosomal recessive osteopetrosis 4 OPTB4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV000995510 CA394190457 rs1163577336 |
280 | R>H | Autosomal recessive osteopetrosis 4 [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA7810545 RCV002279283 RCV001266783 VAR_021000 RCV001814174 RCV000505540 rs760956030 RCV001857236 |
286 | R>Q | Variant assessed as Somatic; 0.0 impact. Autosomal dominant osteopetrosis 2 Inborn genetic diseases OPTA2 [NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC NCI-TCGA dbSNP gnomAD |
|
rs1291061962 CA394190396 VAR_075578 |
286 | R>W | OPTA2; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt dbSNP gnomAD |
| VAR_075579 | 290 | S>Y | OPTA2; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs769080435 RCV001265951 |
297 | V>M | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
rs977932714 CA276677948 VAR_075580 |
299 | A>V | OPTB4; unknown pathological significance [UniProt] | Yes |
ClinGen UniProt Ensembl dbSNP |
|
VAR_064640 rs2038825509 RCV001310220 |
318 | F>L | Autosomal dominant osteopetrosis 2 OPTA2 [ClinVar, UniProt] | Yes |
ClinVar UniProt dbSNP |
| VAR_075581 | 326 | R>G | OPTA2; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_021001 | 332 | M>V | OPTB4 [UniProt] | Yes | UniProt |
| VAR_075582 | 347 | G>R | OPTA2; unknown pathological significance [UniProt] | Yes | UniProt |
|
CA394189434 rs1555465003 RCV000656725 |
389 | G>R | Autosomal recessive osteopetrosis 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA7810374 VAR_064641 rs765444328 COSM967304 |
403 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium OPTB4 [NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt ExAC NCI-TCGA dbSNP gnomAD |
|
RCV002264194 rs780959736 CA7810346 RCV002556568 RCV001120015 |
409 | R>Q | Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
VAR_021002 RCV000251178 RCV001516365 CA344953 RCV000055845 RCV000338192 RCV002277138 rs12926089 |
418 | V>M | Autosomal recessive osteopetrosis 4 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
| VAR_075583 | 473 | S>N | OPTA2; unknown pathological significance [UniProt] | Yes | UniProt |
| VAR_021003 | 490 | L>F | OPTA2 [UniProt] | Yes | UniProt |
|
VAR_064642 CA394187502 rs368190250 CA7810179 |
521 | G>R | OPTB4 [UniProt] | Yes |
ClinGen UniProt ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_064643 rs139329533 CA276673382 |
526 | R>Q | OPTB4 [UniProt] | Yes |
ClinGen UniProt ESP TOPMed dbSNP gnomAD |
|
VAR_021004 rs1233085260 CA394187470 |
526 | R>W | OPTB4 [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP gnomAD |
| VAR_064644 | 549 | L>P | OPTB4 [UniProt] | Yes | UniProt |
|
CA118538 RCV000007263 rs121434432 |
555 | Q>* | Autosomal recessive osteopetrosis 4 [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000578154 rs757788894 CA7810105 |
561 | R>Q | Autosomal recessive osteopetrosis 4 [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2038701269 RCV001197822 |
563 | T>K | Hypopigmentation, organomegaly, and delayed myelination and development [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_075584 | 564 | L>P | OPTA2; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1064794323 CA16620070 VAR_021005 RCV000485112 |
614 | L>P | OPTB4 [UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
RCV001255865 rs1064794323 |
614 | L>R | Autosomal dominant osteopetrosis 2 [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_064645 | 651 | L>P | OPTB4 [UniProt] | Yes | UniProt |
| VAR_021006 | 677 | G>V | OPTA2 [UniProt] | Yes | UniProt |
|
rs1057517718 VAR_083175 CA16042924 RCV000412760 RCV000824813 |
715 | Y>C | Hypopigmentation, organomegaly, and delayed myelination and development HOD; increased voltage-gated chloride channel activity; increased lysosomal lumen acidification; increased cytoplasmic vacuole size [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
VAR_021007 rs1320932332 CA394185484 |
744 | S>F | OPTB4 [UniProt] | Yes |
ClinGen UniProt TOPMed dbSNP gnomAD |
|
CA7809860 rs760740877 VAR_064646 |
758 | F>L | OPTA2 [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
CA118540 RCV000007264 VAR_017838 rs121434433 |
762 | R>Q | Autosomal recessive osteopetrosis 4 OPTA2 and OPTB4; not detected in the fibroblasts from the patient [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
CA394185256 rs1490598538 VAR_064647 |
762 | R>W | Variant assessed as Somatic; 0.0 impact. OPTB4 [NCI-TCGA, UniProt] | Yes |
ClinGen UniProt NCI-TCGA dbSNP gnomAD |
|
RCV000007265 VAR_017839 rs121434434 CA118541 |
766 | L>P | Autosomal recessive osteopetrosis 4 OPTB4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| VAR_064648 | 767 | R>P | OPTB4 [UniProt] | Yes | UniProt |
|
rs772579858 CA7809858 VAR_021008 |
767 | R>Q | OPTB4 [UniProt] | Yes |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV000007266 RCV001851716 rs121434435 CA253987 VAR_017840 RCV000055846 |
767 | R>W | Autosomal recessive osteopetrosis 4 Autosomal dominant osteopetrosis 2 OPTA2 and OPTB4 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
| rs775186615 | 1 | M>? | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs946235877 CA394194351 |
3 | N>I | No |
ClinGen TOPMed |
|
|
CA276630193 rs946235877 |
3 | N>T | No |
ClinGen TOPMed |
|
|
CA7810952 rs745864670 |
5 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276630175 rs1015692728 |
6 | K>M | No |
ClinGen TOPMed |
|
|
CA7810950 rs770644432 |
11 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA276630167 rs866236628 |
12 | G>D | No |
ClinGen Ensembl |
|
|
CA394194226 rs1438872021 |
13 | R>G | No |
ClinGen TOPMed |
|
|
CA394194222 rs1394121118 |
13 | R>P | No |
ClinGen gnomAD |
|
|
rs747186872 CA394194205 |
14 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394194216 rs1458357140 |
14 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA276630166 rs777887319 |
15 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810948 rs777887319 |
15 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394194201 rs1596234094 |
15 | R>W | No |
ClinGen Ensembl |
|
|
rs758456856 CA7810947 |
16 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276630135 rs952709650 |
18 | E>A | No |
ClinGen TOPMed |
|
|
CA394194168 rs1380353017 |
18 | E>Q | No |
ClinGen gnomAD |
|
|
rs1226530946 CA394194147 |
19 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 19 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394194129 rs866811790 |
21 | A>P | No |
ClinGen gnomAD |
|
|
rs866811790 CA276630134 |
21 | A>S | No |
ClinGen gnomAD |
|
|
rs1210753060 CA394194122 |
21 | A>V | No |
ClinGen gnomAD |
|
|
CA394194113 rs1489757147 |
22 | P>L | No |
ClinGen gnomAD |
|
|
CA394194112 rs1221876582 |
23 | L>M | No |
ClinGen gnomAD |
|
|
CA7810945 rs779004440 |
25 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA394194098 rs1237244859 |
26 | R>G | No |
ClinGen gnomAD |
|
|
rs1335334648 CA394194094 |
26 | R>K | No |
ClinGen gnomAD |
|
|
CA394194097 rs1237244859 |
26 | R>W | No |
ClinGen gnomAD |
|
|
CA394194090 rs1158311054 |
27 | T>A | No |
ClinGen TOPMed |
|
|
CA394194081 rs1406198864 |
28 | A>E | No |
ClinGen TOPMed |
|
|
rs1596234026 CA394194069 |
30 | P>L | No |
ClinGen Ensembl |
|
|
rs1306027270 CA394194072 |
30 | P>S | No |
ClinGen gnomAD |
|
|
CA394194065 rs1347342721 |
31 | G>D | No |
ClinGen gnomAD |
|
|
RCV002522821 rs537057233 CA10642968 RCV000277614 |
32 | G>A | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA394194061 rs1293523058 |
32 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
RCV000370036 RCV001859896 CA7810943 rs537057233 |
32 | G>V | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA394194056 rs1360681293 |
33 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1301605920 CA394194052 |
34 | T>A | No |
ClinGen Ensembl |
|
|
CA394194047 rs1159780127 |
34 | T>M | No |
ClinGen gnomAD |
|
|
CA394194044 rs1362792964 |
35 | P>S | No |
ClinGen gnomAD |
|
|
CA394194040 rs1435229895 |
36 | L>M | No |
ClinGen gnomAD |
|
|
rs1228740943 CA394194036 |
36 | L>R | No |
ClinGen TOPMed |
|
|
CA394194019 rs972786509 |
39 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs972786509 CA276630090 |
39 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1488902765 CA394194020 |
39 | G>W | No |
ClinGen gnomAD |
|
|
CA7810941 rs756441751 |
40 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394194017 rs756441751 |
40 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276630070 rs568032471 |
41 | G>R | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA394194011 rs568032471 |
41 | G>W | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA394194002 rs1281135690 |
42 | P>L | No |
ClinGen gnomAD |
|
|
rs1325470085 CA394194005 |
42 | P>S | No |
ClinGen gnomAD |
|
|
CA394194001 rs1340989743 |
43 | G>W | No |
ClinGen gnomAD |
|
|
rs1460371293 CA394193993 |
44 | A>D | No |
ClinGen TOPMed |
|
|
rs1172853301 CA394193987 |
45 | A>G | No |
ClinGen gnomAD |
|
|
rs763628871 CA7810940 |
45 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763628871 CA394193989 |
45 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394193986 rs1172853301 |
45 | A>V | No |
ClinGen gnomAD |
|
|
rs762729630 CA7810939 |
46 | R>C | No |
ClinGen ExAC gnomAD |
|
|
RCV001091434 CA276630015 rs948980711 |
47 | Q>* | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA394193974 rs1265920152 |
47 | Q>H | No |
ClinGen gnomAD |
|
|
CA394193976 rs1478435516 |
47 | Q>R | No |
ClinGen gnomAD |
|
|
rs759148631 CA7810918 |
48 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1215800471 CA394193655 |
49 | P>A | No |
ClinGen gnomAD |
|
| TCGA novel | 49 | P>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1215800471 CA394193654 |
49 | P>S | No |
ClinGen gnomAD |
|
|
CA7810917 rs753759302 |
50 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760707771 CA7810915 |
50 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760707771 CA7810916 |
50 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394193643 rs1222828455 |
51 | S>C | No |
ClinGen gnomAD |
|
|
CA7810914 rs558563372 |
52 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA276685923 rs865969846 |
55 | R>* | No |
ClinGen gnomAD |
|
|
rs761968103 CA394193620 |
55 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761968103 CA7810912 |
55 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs967197502 CA276685913 |
56 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA7810910 rs538186474 |
57 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000905433 CA7810908 rs538485246 |
58 | H>L | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs538485246 CA7810909 |
58 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA394193597 CA7810907 rs770192718 |
59 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1020575479 CA276685899 |
59 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs746442657 CA7810906 |
60 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA394193585 COSM471339 rs781351932 |
61 | S>N | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs781351932 CA7810905 |
61 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA276685882 rs147640837 |
62 | V>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1186618584 CA394193572 |
63 | E>G | No |
ClinGen gnomAD |
|
|
rs757699034 CA7810904 |
66 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276685880 rs931291467 |
66 | D>G | No |
ClinGen Ensembl |
|
|
CA276685858 rs926749321 |
68 | L>F | No |
ClinGen Ensembl |
|
|
CA394193532 rs1284509531 |
69 | L>S | No |
ClinGen TOPMed |
|
| rs762701523 | 71 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1239831140 CA394193519 |
71 | P>A | No |
ClinGen gnomAD |
|
|
rs145267254 CA7810903 RCV001120130 RCV000925973 |
71 | P>L | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA394193517 rs145267254 |
71 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs112431403 CA276683608 |
72 | D>G | No |
ClinGen Ensembl |
|
|
rs1054772658 CA276683607 |
73 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1596224707 CA394193319 |
74 | D>A | No |
ClinGen Ensembl |
|
|
CA7810873 rs751347106 |
75 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810874 rs751347106 |
75 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1479961601 CA394193279 |
78 | P>L | No |
ClinGen gnomAD |
|
|
CA7810872 rs763930418 |
79 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs763026064 CA7810871 |
79 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA394193262 rs368173900 |
80 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7810870 rs368173900 |
80 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1231438452 CA394193268 |
80 | P>T | No |
ClinGen TOPMed |
|
|
rs765189288 CA7810869 |
81 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA7810868 rs759683749 |
83 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA394193216 rs1307399643 |
85 | H>R | No |
ClinGen gnomAD |
|
|
RCV001120129 CA7810867 RCV001856576 rs374263832 |
85 | H>Y | No |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
|
rs771534408 CA394193204 |
86 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs771534408 CA7810866 |
86 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs1161063400 CA394193197 RCV001317640 |
87 | E>K | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
CA394193174 rs1457268043 |
88 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA394193170 rs1423608990 |
89 | L>F | No |
ClinGen gnomAD |
|
|
rs1596224645 CA394193158 |
90 | L>R | No |
ClinGen Ensembl |
|
|
CA7810864 rs773700515 |
91 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394193145 rs1161762057 |
92 | L>F | No |
ClinGen gnomAD |
|
|
rs1417753527 CA394193113 |
94 | Y>* | No |
ClinGen gnomAD |
|
|
rs906282742 CA276683471 |
96 | S>I | No |
ClinGen Ensembl |
|
|
CA394193022 rs1555465963 RCV000523128 |
99 | Y>H | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA394193011 rs1261008899 |
100 | D>N | No |
ClinGen gnomAD |
|
|
rs1045935499 CA276683468 |
106 | L>P | No |
ClinGen gnomAD |
|
|
rs1045935499 CA394192936 |
106 | L>Q | No |
ClinGen gnomAD |
|
|
rs1315354618 CA394192887 |
111 | E>K | No |
ClinGen gnomAD |
|
|
CA394192873 rs1381111036 |
112 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA394192875 rs1454222473 |
112 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA7810829 rs760871410 |
113 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1333850529 CA394192867 |
113 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA276683452 rs924786612 |
115 | N>S | No |
ClinGen TOPMed |
|
|
rs1166263818 CA394192832 |
116 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
RCV002278426 rs201003681 RCV000344700 RCV001510240 CA7810828 |
117 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs760386183 CA7810802 |
118 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA7810801 rs772765858 |
120 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3402094 CA276683100 rs763806969 |
120 | R>W | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA394192712 rs1225191254 |
123 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
COSM701907 rs748053318 CA7810799 |
123 | E>G | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA394192713 rs1225191254 |
123 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1032079176 CA276683098 |
124 | I>T | No |
ClinGen Ensembl |
|
|
CA394192701 rs1451108389 |
124 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 125 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394192683 rs1299906997 |
125 | K>N | No |
ClinGen TOPMed |
|
|
CA394192679 rs1362834202 |
126 | R>C | No |
ClinGen TOPMed |
|
|
rs1201465216 CA394192678 |
126 | R>H | No |
ClinGen gnomAD |
|
|
rs1214176986 CA394192670 |
127 | W>G | No |
ClinGen TOPMed |
|
|
CA394192658 rs1476785217 |
128 | V>L | No |
ClinGen gnomAD |
|
|
CA394192640 rs1245613157 |
129 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA276683091 rs1028581657 |
132 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA394192625 rs1028581657 |
132 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA394192620 rs1448304600 |
133 | I>L | No |
ClinGen gnomAD |
|
|
rs768525131 CA7810797 |
133 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276683086 rs986070320 |
136 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs986070320 CA394192591 |
136 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1474822482 CA394192580 |
137 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1253721352 CA394192561 |
139 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA394192551 rs1222194724 |
140 | V>M | No |
ClinGen gnomAD |
|
|
CA7810794 rs535022444 |
143 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746088004 CA7810793 |
144 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA7810791 rs757310326 |
146 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA394192484 rs1318335217 |
146 | I>V | No |
ClinGen gnomAD |
|
|
CA7810789 rs764560333 |
147 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1596223917 CA394192466 |
148 | V>L | No |
ClinGen Ensembl |
|
|
rs1423860962 CA394192457 |
149 | E>K | No |
ClinGen gnomAD |
|
|
rs753054772 CA7810787 |
150 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA394192441 rs753054772 |
150 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA394192435 rs1323190910 |
151 | L>V | No |
ClinGen TOPMed |
|
|
CA394192407 rs1345842000 |
154 | L>V | No |
ClinGen TOPMed |
|
|
rs887217533 CA276683066 |
155 | K>R | No |
ClinGen Ensembl |
|
|
CA7810784 rs772746271 |
156 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs767015118 CA7810783 |
157 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1596223876 CA394192361 |
158 | V>G | No |
ClinGen Ensembl |
|
|
rs761253697 CA7810782 |
158 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA7810750 rs140315822 |
163 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1324258393 CA394192260 |
163 | I>T | No |
ClinGen TOPMed |
|
|
rs112711601 CA276682851 |
165 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7810747 rs780537814 |
168 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810746 rs756849986 |
168 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1471909748 CA394192213 |
169 | K>M | No |
ClinGen gnomAD |
|
|
CA7810744 rs763652763 |
171 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394192196 rs1265340130 |
172 | L>P | No |
ClinGen gnomAD |
|
|
rs1567272107 CA394192198 |
172 | L>V | No |
ClinGen Ensembl |
|
|
rs1486276846 CA394192190 |
173 | S>F | No |
ClinGen gnomAD |
|
|
CA7810743 rs762586374 |
173 | S>P | No |
ClinGen ExAC gnomAD |
|
|
RCV002556521 rs752298744 CA7810742 RCV001118589 |
174 | F>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA7810741 rs765066490 |
175 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs765066490 CA394192179 |
175 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA394192147 rs1323003766 |
180 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA394192146 rs1323003766 |
180 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7810735 rs373756735 |
181 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749870443 CA7810731 |
184 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200960952 CA7810729 |
185 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7810728 rs147280414 |
186 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7810726 rs758175539 |
187 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA394192105 rs1204230416 |
188 | L>I | No |
ClinGen gnomAD |
|
|
rs764870423 CA7810724 |
189 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA276682769 rs1013856684 COSM701908 |
190 | G>D | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA394192094 rs1269819774 |
190 | G>S | No |
ClinGen TOPMed |
|
|
rs766039100 CA7810721 |
193 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760492474 CA7810720 |
194 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394192048 rs1252471692 |
197 | I>T | No |
ClinGen TOPMed |
|
|
rs374764558 CA276682762 |
198 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7810719 rs374764558 |
198 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7810687 rs748807833 |
199 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 199 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779595100 CA7810686 |
202 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA394192006 rs1366250568 |
202 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 204 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1403807177 CA394191991 |
205 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA7810684 rs750362202 |
206 | I>L | No |
ClinGen ExAC |
|
| TCGA novel | 208 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1596222003 CA394191917 |
215 | G>V | No |
ClinGen Ensembl |
|
|
rs988222717 CA276682105 |
219 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1246782459 CA394191887 |
220 | H>Y | No |
ClinGen gnomAD |
|
|
CA7810677 rs765414526 |
221 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1289649075 CA394191876 |
222 | V>M | No |
ClinGen gnomAD |
|
|
CA7810675 rs777300281 |
223 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1287062379 CA394191864 |
224 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs771383084 CA394191860 |
225 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA7810674 rs771383084 |
225 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA394191855 rs1352884655 |
225 | K>T | No |
ClinGen TOPMed |
|
|
CA7810644 rs779246889 |
226 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810643 rs779246889 RCV001294494 |
226 | T>M | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs753953914 CA7810640 |
228 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7810637 rs750905731 |
229 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs756574078 CA7810638 |
229 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs759347236 CA276679219 |
230 | K>E | No |
ClinGen gnomAD |
|
|
CA394191238 rs1436335801 |
233 | G>D | No |
ClinGen TOPMed |
|
|
rs774749842 RCV001115424 RCV001316502 CA7810634 |
233 | G>S | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA394191223 rs1596220689 |
235 | I>M | No |
ClinGen Ensembl |
|
|
CA276679203 rs1017704127 |
237 | S>A | No |
ClinGen TOPMed |
|
|
rs866033819 CA276679202 |
237 | S>F | No |
ClinGen Ensembl |
|
|
CA7810632 rs759253716 |
239 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810630 rs770362140 |
241 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA7810627 rs772087883 |
243 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs749523800 CA7810623 |
244 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA7810624 rs373322071 |
244 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394191141 rs1209605608 |
248 | G>W | No |
ClinGen TOPMed |
|
|
CA7810582 rs746111460 |
250 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA394191098 rs1251757740 |
254 | G>A | No |
ClinGen TOPMed |
|
|
CA394191097 rs1251757740 |
254 | G>V | No |
ClinGen TOPMed |
|
|
rs200451681 CA7810580 |
256 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs758953225 CA7810577 |
259 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs779400708 CA7810575 |
260 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA394191025 rs1433553110 |
266 | S>* | No |
ClinGen gnomAD |
|
|
CA7810574 rs755655596 |
267 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1173635757 CA394191019 |
267 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs761436699 CA7810571 |
270 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs751150295 CA7810570 |
271 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs541169535 CA7810569 |
271 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1410241307 CA394190996 |
272 | D>H | No |
ClinGen TOPMed |
|
|
rs775085622 COSM2151996 CA7810568 RCV001339340 RCV001120327 |
274 | K>R | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs775085622 CA7810567 |
274 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394190500 rs776459030 |
276 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs762061326 CA276677974 |
278 | Y>* | No |
ClinGen gnomAD |
|
|
CA394190459 rs1395527274 RCV001120326 RCV002556579 |
280 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
rs1459410363 CA394190449 |
281 | R>K | No |
ClinGen gnomAD |
|
|
rs1187107214 CA394190434 |
282 | D>G | No |
ClinGen gnomAD |
|
|
CA394190441 rs1415631084 |
282 | D>N | No |
ClinGen gnomAD |
|
|
rs1253332600 CA394190421 |
284 | E>K | No |
ClinGen gnomAD |
|
|
CA394190371 rs368342297 CA394190370 |
288 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA394190352 rs923808258 |
291 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs923808258 CA276677959 |
291 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs866442870 CA276677957 |
292 | G>W | No |
ClinGen Ensembl |
|
|
CA394190334 rs1331861099 |
293 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1331861099 CA394190337 |
293 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA394190323 rs1325736301 COSM3690759 |
294 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA394190312 rs1427304156 |
295 | A>D | No |
ClinGen TOPMed |
|
| TCGA novel | 295 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1164202590 CA394190310 |
296 | G>R | No |
ClinGen gnomAD |
|
|
rs769080435 CA7810540 |
297 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA394190278 rs1469335898 |
300 | A>T | No |
ClinGen gnomAD |
|
|
CA276677945 rs199613161 |
300 | A>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1467468428 CA394190247 |
303 | A>S | No |
ClinGen gnomAD |
|
|
CA276677938 rs558354107 |
305 | V>M | No |
ClinGen 1000Genomes gnomAD |
|
|
RCV000788792 CA394190152 rs1596218683 |
306 | G>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA394190137 rs1275680536 |
308 | V>I | No |
ClinGen gnomAD |
|
|
COSM3817245 CA7810507 rs764097491 |
310 | F>L | breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA394190048 rs1213940371 |
315 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1295022358 CA394190022 |
317 | S>F | No |
ClinGen gnomAD |
|
| TCGA novel | 318 | F>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776176305 CA394189984 |
321 | Q>H | No |
ClinGen ExAC TOPMed |
|
|
RCV001174985 rs2038825233 |
324 | T>I | No |
ClinVar dbSNP |
|
|
rs201377067 CA7810503 |
326 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 326 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs776917548 | 327 | I>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394189942 rs776917548 |
327 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA7810482 rs773905347 |
333 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA394189879 rs1334003772 |
335 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1334003772 CA394189878 |
335 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
CA394189865 rs1268246721 |
337 | T>N | No |
ClinGen gnomAD |
|
|
CA394189841 rs1314588897 |
341 | V>I | No |
ClinGen gnomAD |
|
|
CA7810481 rs768337253 |
344 | I>F | No |
ClinGen ExAC gnomAD |
|
|
CA394189810 rs1324166271 |
345 | Y>* | No |
ClinGen gnomAD |
|
|
CA7810480 rs200937692 |
346 | H>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1373666632 CA394189804 |
346 | H>R | No |
ClinGen gnomAD |
|
|
CA7810478 rs769710386 |
349 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1440862901 CA394189783 |
349 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7810477 rs745796182 |
351 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394189754 rs1376175341 |
353 | S>F | No |
ClinGen TOPMed |
|
|
rs1471037574 CA394189742 |
355 | P>S | No |
ClinGen TOPMed |
|
|
CA394189720 rs1435067199 |
358 | I>M | No |
ClinGen gnomAD |
|
|
CA394189701 rs1467842429 |
361 | G>E | No |
ClinGen gnomAD |
|
|
rs528134862 CA7810473 |
361 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs758753035 CA7810472 |
362 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA7810470 rs765414475 |
365 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA394189670 rs1363926234 |
366 | E>K | No |
ClinGen gnomAD |
|
|
rs1379676342 CA394189644 |
367 | K>N | No |
ClinGen TOPMed |
|
|
TCGA novel CA394189636 rs775143967 CA7810441 |
368 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
rs1475942268 CA394189642 |
368 | M>L | No |
ClinGen gnomAD |
|
|
rs772332379 CA7810440 |
369 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA394189613 rs1339113016 |
372 | I>F | No |
ClinGen gnomAD |
|
|
CA394189614 rs1339113016 |
372 | I>V | No |
ClinGen gnomAD |
|
|
CA394189606 rs1235674326 |
373 | H>Y | No |
ClinGen gnomAD |
|
|
rs1410701535 CA394189586 |
375 | I>M | No |
ClinGen gnomAD |
|
|
CA394189592 rs1292698143 |
375 | I>V | No |
ClinGen gnomAD |
|
|
rs772016816 CA7810434 |
376 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779244927 CA7810432 |
378 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs768971657 RCV002522816 CA7810431 RCV000361717 |
379 | I>V | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA276676913 rs887864779 |
380 | A>G | No |
ClinGen Ensembl |
|
|
RCV001856573 rs553977226 RCV001120016 CA7810429 |
380 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| TCGA novel | 380 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1470168714 CA394189553 |
381 | M>R | No |
ClinGen gnomAD |
|
|
CA394189555 rs1470168714 |
381 | M>T | No |
ClinGen gnomAD |
|
|
CA7810427 COSM1708616 rs750938268 |
381 | M>V | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA7810425 rs757590102 |
383 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs757590102 COSM1637474 CA394189543 |
383 | V>M | Variant assessed as Somatic; 0.0 impact. bone [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| rs771365308 | 385 | G>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1242987187 CA394189448 |
386 | G>D | No |
ClinGen TOPMed |
|
|
CA7810387 rs541028244 |
386 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1242987187 CA394189446 |
386 | G>V | No |
ClinGen TOPMed |
|
|
rs1350110258 CA394189442 |
387 | V>A | No |
ClinGen TOPMed |
|
|
CA7810385 rs368848461 |
387 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394189445 rs368848461 |
387 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394189430 rs1215110284 |
389 | G>A | No |
ClinGen gnomAD |
|
|
rs374766870 CA7810381 |
391 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 391 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394189421 rs1268323382 |
391 | V>L | No |
ClinGen gnomAD |
|
|
CA276676398 rs1024724740 |
393 | N>S | No |
ClinGen TOPMed |
|
|
CA276676394 rs943361069 |
394 | A>S | No |
ClinGen TOPMed |
|
|
rs1250916342 CA394189398 |
394 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 395 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394189394 rs1375247394 |
395 | L>S | No |
ClinGen gnomAD |
|
|
rs1179207288 CA394189389 |
396 | N>D | No |
ClinGen TOPMed |
|
|
rs1418047459 CA394189371 |
398 | W>* | No |
ClinGen gnomAD |
|
|
rs757198557 CA7810379 |
398 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs1379115555 CA394189365 |
399 | L>V | No |
ClinGen TOPMed |
|
|
rs1259621965 CA394189353 |
401 | M>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1259621965 CA394189352 |
401 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7810377 rs763753568 |
401 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA7810376 RCV000778456 rs200789982 |
403 | R>* | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
CA7810375 rs765444328 |
403 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1177824805 CA394189301 |
407 | I>S | No |
ClinGen gnomAD |
|
|
CA394189295 rs1596215927 |
408 | H>P | No |
ClinGen Ensembl |
|
|
rs1018561800 CA276675559 |
408 | H>Y | No |
ClinGen Ensembl |
|
|
rs1253129482 CA394189289 |
409 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs770753798 CA7810345 |
410 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs746526523 CA7810344 |
414 | V>A | No |
ClinGen ExAC |
|
|
CA394189260 rs1217522933 |
414 | V>M | No |
ClinGen gnomAD |
|
|
rs1314720299 CA394189251 |
415 | I>T | No |
ClinGen gnomAD |
|
|
CA7810342 rs149031035 |
417 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394189234 rs12926089 |
418 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1172502299 CA394189223 |
420 | V>E | No |
ClinGen TOPMed |
|
|
CA394189224 CA394189225 rs753684336 |
420 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810339 rs753684336 |
420 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394189214 rs1360191307 |
422 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs377299832 CA7810337 |
423 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1435171864 CA394189198 |
424 | T>M | No |
ClinGen gnomAD |
|
|
CA394189175 rs1432475602 |
428 | A>G | No |
ClinGen gnomAD |
|
|
rs1191679982 CA394189179 |
428 | A>T | No |
ClinGen gnomAD |
|
|
CA394189166 rs1261855596 |
429 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs767504116 CA394189165 |
430 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767504116 CA7810335 |
430 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276675527 rs1054593112 |
431 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs775029101 CA394189142 |
433 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs769326220 CA7810332 |
434 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA394189131 rs1382966039 |
435 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA394189135 rs1327567550 |
435 | S>P | No |
ClinGen gnomAD |
|
|
CA7810327 rs553904081 RCV001856556 RCV001118496 |
436 | R>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA7810328 rs746656282 |
436 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1313723622 CA394189127 |
437 | D>N | No |
ClinGen gnomAD |
|
|
CA276675507 rs971904591 |
439 | Q>* | No |
ClinGen TOPMed |
|
|
rs1465333844 CA394189091 |
442 | Q>* | No |
ClinGen gnomAD |
|
|
rs1373622475 CA394189086 |
442 | Q>H | No |
ClinGen gnomAD |
|
|
rs1172441331 CA394189085 |
443 | G>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 444 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754968460 CA7810323 |
444 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1261762692 CA394189069 |
445 | S>F | No |
ClinGen gnomAD |
|
|
CA394189061 rs1486424529 |
446 | M>I | No |
ClinGen gnomAD |
|
|
rs779826360 CA7810320 |
446 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1254918192 CA394189051 |
448 | Y>S | No |
ClinGen gnomAD |
|
|
CA7810318 rs750628872 |
449 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810319 rs750628872 |
449 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276675503 rs750628872 |
449 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810282 rs781106093 |
452 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394188329 rs781106093 |
452 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001009188 rs1322266202 |
453 | F>missing | No |
ClinVar dbSNP |
|
| TCGA novel | 454 | C>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 454 | C>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7810281 rs771221831 |
455 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA7810279 rs557270746 |
456 | D>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 456 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA394188255 rs1396008150 |
458 | E>K | No |
ClinGen gnomAD |
|
|
CA394188196 rs1194051738 |
462 | M>I | No |
ClinGen gnomAD |
|
|
CA394188200 rs1246603037 |
462 | M>T | No |
ClinGen gnomAD |
|
|
CA276674646 rs936755556 |
462 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA7810276 rs779277253 |
464 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA394188109 rs1342839139 |
469 | T>S | No |
ClinGen gnomAD |
|
|
rs1413976002 CA394188105 |
470 | P>A | No |
ClinGen TOPMed |
|
|
rs761401489 CA7810271 |
470 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394188078 rs1327676947 |
472 | K>E | No |
ClinGen gnomAD |
|
|
COSM967303 rs775122102 CA7810266 |
474 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1413097834 CA394188038 |
475 | V>L | No |
ClinGen gnomAD |
|
|
rs1168990979 CA394188020 |
476 | S>N | No |
ClinGen gnomAD |
|
|
CA394187988 rs1193248892 |
480 | D>E | No |
ClinGen gnomAD |
|
|
rs745692284 CA394187994 |
480 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745692284 CA7810262 |
480 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375552320 CA7810261 |
481 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1301654455 CA394187985 |
481 | P>S | No |
ClinGen TOPMed |
|
|
CA394187864 rs1218973895 |
484 | S>F | No |
ClinGen gnomAD |
|
|
rs1489998598 CA394187836 CA394187835 |
486 | N>K | No |
ClinGen TOPMed |
|
|
rs371746274 CA7810202 |
487 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7810201 rs202022689 RCV000895479 |
488 | L>Q | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA7810199 rs367805626 |
491 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367805626 CA7810198 |
491 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394187781 rs1387280411 |
492 | L>V | No |
ClinGen TOPMed |
|
|
rs199917673 CA276673510 |
494 | T>A | No |
ClinGen Ensembl |
|
|
rs1018009699 CA276673508 |
494 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA394187734 rs1457451446 |
496 | V>A | No |
ClinGen gnomAD |
|
|
CA394187723 rs1161547013 |
497 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA7810195 rs754657236 |
499 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs766003053 CA7810193 |
505 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs750415617 CA7810191 |
506 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA276673436 rs955127068 |
508 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs891494331 CA276673423 |
509 | V>L | No |
ClinGen gnomAD |
|
|
rs891494331 CA394187582 |
509 | V>M | No |
ClinGen gnomAD |
|
|
rs763164345 CA7810186 |
512 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1362667497 CA394187541 |
514 | F>S | No |
ClinGen gnomAD |
|
|
rs371736537 CA7810185 |
516 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1157872422 CA394187521 |
517 | S>C | No |
ClinGen gnomAD |
|
|
rs1437801106 CA394187517 |
518 | L>Q | No |
ClinGen TOPMed |
|
|
CA7810182 rs777100752 |
519 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1419536926 CA394187507 |
520 | I>F | No |
ClinGen gnomAD |
|
|
CA394187500 rs1261991162 |
521 | G>E | No |
ClinGen gnomAD |
|
|
rs768299401 CA7810178 |
522 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs768299401 CA394187497 |
522 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs369173317 CA7810175 |
528 | F>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1340187547 CA394187455 |
528 | F>L | No |
ClinGen gnomAD |
|
|
CA394187452 rs1313701099 |
529 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 529 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749998679 CA7810174 |
529 | G>W | No |
ClinGen ExAC |
|
|
CA7810173 rs781172012 |
530 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs751302188 CA7810171 |
533 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA394187431 rs751302188 |
533 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs985218673 CA276673340 |
534 | Y>C | No |
ClinGen Ensembl |
|
|
CA7810170 rs763808046 |
535 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7810169 rs763111215 |
536 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394187408 rs1188138778 |
537 | G>E | No |
ClinGen gnomAD |
|
|
CA7810165 rs776642923 |
537 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs548941878 CA7810163 |
538 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed |
|
rs773580982 CA7810161 |
539 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762251819 CA7810140 |
540 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394187172 rs1247770628 |
541 | W>* | No |
ClinGen gnomAD |
|
|
rs774920565 CA7810139 |
542 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1266945568 CA394187155 |
543 | D>N | No |
ClinGen gnomAD |
|
|
rs866325373 CA276669719 |
545 | G>D | No |
ClinGen Ensembl |
|
|
CA394187116 rs1287838939 |
547 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1354175976 CA394187119 |
547 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA394187114 rs1237646633 |
548 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA7810134 rs746579595 |
551 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA394187033 rs1438074380 |
556 | L>V | No |
ClinGen gnomAD |
|
|
CA394187023 rs1328785025 |
557 | G>C | No |
ClinGen gnomAD |
|
| TCGA novel | 558 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1180615464 COSM967302 CA394186968 |
558 | G>R | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs767717748 CA7810106 |
560 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1181205090 CA394186945 |
560 | V>L | No |
ClinGen Ensembl |
|
|
CA7810102 rs554219137 |
568 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7810101 RCV001115340 rs753172781 |
569 | I>V | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA7810099 rs760390470 |
574 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA7810097 rs771604430 |
577 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779900843 CA7810092 |
584 | M>I | No |
ClinGen ExAC |
|
|
CA7810093 rs749027624 |
584 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746112826 CA7810090 |
588 | M>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394186632 rs746112826 |
588 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394186638 rs1227027091 |
588 | M>V | No |
ClinGen gnomAD |
|
|
CA276669444 rs377190713 |
590 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA394186604 rs1374811490 |
590 | A>V | No |
ClinGen gnomAD |
|
|
rs778420950 CA7810086 |
593 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA394186549 rs1162943930 |
595 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA394186532 rs1159210965 |
596 | V>A | No |
ClinGen gnomAD |
|
|
CA7810083 rs200121444 |
596 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7810082 rs760207641 |
598 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA276669073 rs956317489 |
603 | D>G | No |
ClinGen TOPMed |
|
|
CA7810044 rs200917404 |
603 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA394186424 rs200917404 |
603 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1596211959 CA394186402 |
606 | I>V | No |
ClinGen Ensembl |
|
|
CA7810039 rs752207159 |
608 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs759560642 CA394186361 |
612 | P>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 612 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759560642 CA7810037 |
612 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1468841343 CA394186355 |
613 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1468841343 CA394186354 |
613 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
CA276669024 rs1000353389 |
614 | L>M | No |
ClinGen TOPMed |
|
|
rs370045081 CA7810036 |
615 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394186315 rs1172405958 |
618 | A>V | No |
ClinGen gnomAD |
|
|
CA394186309 rs1372117927 |
619 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs773464510 CA7810033 |
622 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1183455019 CA394186291 |
623 | H>Y | No |
ClinGen gnomAD |
|
|
rs1312000540 CA394186278 |
624 | S>L | No |
ClinGen TOPMed |
|
|
CA7810032 rs772244670 |
626 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1203259231 CA394186231 |
630 | V>G | No |
ClinGen gnomAD |
|
|
rs751747803 CA7809994 |
630 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751747803 CA394186233 |
630 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7809992 rs763006305 |
631 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA394186226 rs1274966207 |
631 | M>L | No |
ClinGen gnomAD |
|
|
CA394186198 rs1596211609 |
635 | V>L | No |
ClinGen Ensembl |
|
|
CA7809990 rs770278692 |
636 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202148733 CA276668776 |
639 | R>K | No |
ClinGen 1000Genomes |
|
|
CA7809989 rs536765749 |
639 | R>S | No |
ClinGen 1000Genomes ExAC |
|
|
CA394186168 rs1403499328 |
640 | R>Q | No |
ClinGen gnomAD |
|
|
CA394186170 rs1400598641 |
640 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA7809988 rs370109321 |
641 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs141991492 CA7809986 |
641 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs141991492 CA7809987 |
641 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376096625 CA394186150 |
643 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA276668753 rs1037682766 |
643 | K>T | No |
ClinGen Ensembl |
|
|
rs370657753 CA7809982 |
645 | G>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7809983 rs370657753 |
645 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7809979 rs375096271 |
646 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7809980 rs375096271 |
646 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756978484 CA7809978 |
647 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA276668704 rs990895217 |
648 | V>M | No |
ClinGen Ensembl |
|
|
CA7809977 rs547786206 |
649 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1262139884 CA394186112 |
650 | V>A | No |
ClinGen gnomAD |
|
|
CA394186114 rs1320715848 |
650 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA394186116 rs1320715848 |
650 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs758623954 CA7809975 |
652 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7809973 rs765264888 |
653 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7809972 RCV001121922 RCV000224650 rs114827619 |
654 | T>M | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA394186087 rs114827619 |
654 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1468307771 CA394186081 |
655 | A>V | No |
ClinGen gnomAD |
|
|
rs1467415380 CA394186073 |
657 | N>D | No |
ClinGen gnomAD |
|
|
rs1596211495 CA394186070 |
657 | N>S | No |
ClinGen Ensembl |
|
|
CA394186062 rs1417608149 |
658 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs377646655 CA394186049 |
660 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7809965 rs377646655 |
660 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7809964 rs769158352 |
662 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA394186032 rs1198692603 |
663 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA394186021 rs1596211475 |
664 | V>G | No |
ClinGen Ensembl |
|
|
CA394186014 rs1270436658 |
665 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA394186008 rs1596211465 COSM1640399 |
666 | H>R | stomach [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1214352549 CA394186001 |
667 | A>V | No |
ClinGen gnomAD |
|
|
rs142186742 CA7809960 |
668 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA394185984 rs1451045230 |
669 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA394185983 rs1596211437 |
670 | T>P | No |
ClinGen Ensembl |
|
|
rs1382653825 CA394185979 |
670 | T>S | No |
ClinGen gnomAD |
|
|
CA394185956 rs1343341449 |
672 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA394185952 rs1157804377 |
672 | P>L | No |
ClinGen gnomAD |
|
|
CA394185955 rs1343341449 |
672 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1414538678 CA394185950 |
673 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1414538678 CA394185951 |
673 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA394185948 rs1430982446 |
673 | A>V | No |
ClinGen gnomAD |
|
|
RCV001882397 RCV001121919 rs758816489 CA7809934 |
674 | R>L | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA7809935 rs758816489 |
674 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7809936 rs753799531 |
674 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000292653 CA10647024 rs886051700 |
676 | Q>H | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA394185934 rs1188626074 |
676 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA394185905 COSM87989 rs1210998009 |
681 | R>C | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA394185904 rs1325683824 |
681 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs750932924 CA7809933 |
686 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276668159 rs977283828 |
687 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA276668157 rs968607682 |
688 | L>V | No |
ClinGen TOPMed |
|
|
RCV000761926 rs11559208 CA276668156 |
691 | K>E | No |
ClinGen ClinVar Ensembl dbSNP |
|
| TCGA novel | 692 | V>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781763863 CA7809915 |
692 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs956955455 CA276668095 |
694 | V>M | No |
ClinGen Ensembl |
|
|
rs1479554082 CA394185807 |
695 | E>K | No |
ClinGen gnomAD |
|
|
rs1032308852 CA276668092 |
696 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1032308852 CA394185797 |
696 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1222925593 CA394185799 |
696 | R>W | No |
ClinGen gnomAD |
|
|
CA394185794 rs1244613504 |
697 | S>P | No |
ClinGen gnomAD |
|
|
rs1308731255 CA394185784 |
698 | N>I | No |
ClinGen gnomAD |
|
|
CA394185771 rs1596210657 |
700 | G>V | No |
ClinGen Ensembl |
|
|
rs1426939582 CA394185765 |
702 | V>I | No |
ClinGen gnomAD |
|
|
CA276668083 rs1051589129 |
704 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1051589129 CA394185750 |
704 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
RCV001119940 rs375281048 CA7809912 RCV002069948 |
704 | R>W | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs763267020 CA7809911 |
705 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA276668081 rs370865246 |
705 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1269856610 CA394185714 |
710 | D>V | No |
ClinGen gnomAD |
|
|
rs368724913 CA276668080 |
712 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA7809909 rs368724913 |
712 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7809908 rs760171498 |
712 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA394185694 rs200812045 |
713 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs767382071 CA7809906 |
714 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM967291 rs1336593109 CA394185689 |
714 | A>V | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA7809904 rs773973071 |
717 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA10647831 RCV000384564 rs886051699 |
717 | R>H | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA394185653 rs1158843661 |
720 | P>R | No |
ClinGen gnomAD |
|
|
rs1421059489 CA394185642 |
722 | Q>* | No |
ClinGen gnomAD |
|
|
CA394185631 rs1343972894 |
723 | S>F | No |
ClinGen gnomAD |
|
|
CA7809901 rs775845218 |
726 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1387754360 CA394185604 |
728 | Q>* | No |
ClinGen gnomAD |
|
|
CA394185599 rs1156961429 |
728 | Q>L | No |
ClinGen gnomAD |
|
|
CA276668043 rs937106092 |
730 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs958814324 CA276668037 |
731 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs369873953 CA7809899 |
731 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs958814324 CA394185581 |
731 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA276668030 rs949623816 |
734 | T>A | No |
ClinGen TOPMed |
|
|
CA394185553 rs1447569031 |
735 | M>T | No |
ClinGen gnomAD |
|
|
rs1197871022 CA394185556 |
735 | M>V | No |
ClinGen gnomAD |
|
|
CA276668027 rs918083846 |
737 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1202858049 CA394185531 |
738 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1202858049 CA394185530 |
738 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1202858049 CA394185532 |
738 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs757656862 CA7809897 |
739 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs778191334 CA7809895 |
745 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs201810925 RCV001316746 CA7809894 |
747 | T>M | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA394185454 rs1406863005 |
749 | P>L | No |
ClinGen gnomAD |
|
|
rs1178634350 CA394185451 |
750 | Q>K | No |
ClinGen gnomAD |
|
|
CA394185412 rs1428864451 |
752 | A>V | Variant assessed as Somatic; 8.008e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs140032494 CA7809864 |
753 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs376638904 CA7809861 |
756 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376638904 CA276667685 |
756 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776979076 CA7809862 |
756 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1484087364 CA394185336 |
757 | V>A | No |
ClinGen TOPMed |
|
|
CA394185285 rs1205882381 |
760 | L>P | No |
ClinGen TOPMed |
|
|
rs1181912032 CA394185273 |
761 | F>L | No |
ClinGen gnomAD |
|
|
CA394185252 rs121434433 |
762 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs111953149 CA276667660 |
763 | A>S | No |
ClinGen Ensembl |
|
|
CA394185227 rs1294613134 |
764 | L>M | No |
ClinGen gnomAD |
|
|
CA7809855 rs768989814 |
771 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA394185147 rs1159277558 |
772 | V>A | No |
ClinGen gnomAD |
|
|
CA394185151 rs921948553 |
772 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA276667622 rs921948553 |
772 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1401870819 CA394185136 |
773 | D>N | No |
ClinGen gnomAD |
|
|
CA7809853 rs144511808 |
775 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs534953229 CA7809852 |
775 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA394185093 rs534953229 |
775 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751025439 CA7809851 |
776 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1172932679 CA394184990 |
778 | V>I | No |
ClinGen gnomAD |
|
|
CA394184967 rs1427277978 |
779 | V>F | No |
ClinGen gnomAD |
|
|
CA394184971 rs1427277978 |
779 | V>I | No |
ClinGen gnomAD |
|
|
CA7809826 rs766116666 |
780 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA394184933 rs1596209724 |
781 | L>V | No |
ClinGen Ensembl |
|
|
rs1009529908 CA276667358 |
782 | V>M | No |
ClinGen gnomAD |
|
|
rs201361839 CA276667352 |
788 | A>T | No |
ClinGen 1000Genomes |
|
|
CA394184817 rs1206285143 |
788 | A>V | No |
ClinGen gnomAD |
|
|
rs1443383234 CA394184793 |
790 | Y>H | No |
ClinGen TOPMed |
|
|
CA7809822 rs761881885 |
791 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA276667349 rs566172344 |
791 | R>H | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs774421161 CA7809821 |
795 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA394184649 rs1596209680 |
797 | L>F | No |
ClinGen Ensembl |
|
|
rs1596209676 CA394184629 |
798 | E>G | No |
ClinGen Ensembl |
|
|
rs1361046004 CA394184638 |
798 | E>Q | No |
ClinGen TOPMed |
|
|
CA276667346 rs868009985 |
799 | E>* | No |
ClinGen Ensembl |
|
|
CA7809819 RCV001882390 RCV001119937 rs184833329 |
801 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA394184556 rs184833329 |
801 | S>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA276667341 rs917059058 |
803 | A>P | No |
ClinGen Ensembl |
|
|
CA394184491 rs1164752901 |
804 | Q>* | No |
ClinGen gnomAD |
|
|
rs1426672275 CA394184484 |
804 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs992765173 CA276667339 |
805 | T>M | No |
ClinGen gnomAD |
|
|
rs924316093 CA276667319 |
806 | T>R | No |
ClinGen Ensembl |
3 associated diseases with P51798
[MIM: 611490]: Osteopetrosis, autosomal recessive 4 (OPTB4)
A rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. Osteopetrosis occurs in two forms
[MIM: 166600]: Osteopetrosis, autosomal dominant 2 (OPTA2)
A rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. Osteopetrosis occurs in two forms
[MIM: 618541]: Hypopigmentation, organomegaly, and delayed myelination and development (HOD)
An autosomal dominant pleiotropic syndrome characterized by skin and hair hypopigmentation, growth and developmental delay, organomegaly including enlarged liver, spleen and kidneys, delayed brain myelination and developmental deficit in motor skills. Skin and liver biopsies show cellular accumulation of large intracellular vacuoles. {ECO:0000269|PubMed:31155284}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. Osteopetrosis occurs in two forms
- A rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. Osteopetrosis occurs in two forms
- An autosomal dominant pleiotropic syndrome characterized by skin and hair hypopigmentation, growth and developmental delay, organomegaly including enlarged liver, spleen and kidneys, delayed brain myelination and developmental deficit in motor skills. Skin and liver biopsies show cellular accumulation of large intracellular vacuoles. {ECO:0000269|PubMed:31155284}. Note=The disease is caused by variants affecting the gene represented in this entry.
No regional properties for P51798
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for P51798 | |||
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloride channel complex | An ion channel complex through which chloride ions pass. |
| cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
| intracellular membrane-bounded organelle | Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. |
| lysosomal membrane | The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| chloride channel activity | Enables the facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. |
| chloride transmembrane transporter activity | Enables the transfer of chloride ions from one side of a membrane to the other. |
| voltage-gated chloride channel activity | Enables the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| response to pH | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution. |
| transepithelial chloride transport | The directed movement of chloride ions from one side of an epithelium to the other. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P51790 | CLCN3 | H(+)/Cl(-) exchange transporter 3 | Homo sapiens (Human) | PR |
| P51797 | CLCN6 | H(+)/Cl(-) exchange transporter 6 | Homo sapiens (Human) | PR |
| O35454 | Clcn6 | H(+)/Cl(-) exchange transporter 6 | Mus musculus (Mouse) | PR |
| Q61418 | Clcn4 | H(+)/Cl(-) exchange transporter 4 | Mus musculus (Mouse) | PR |
| O70496 | Clcn7 | H(+)/Cl(-) exchange transporter 7 | Mus musculus (Mouse) | PR |
| P51799 | Clcn7 | H(+)/Cl(-) exchange transporter 7 | Rattus norvegicus (Rat) | PR |
| P60300 | CLC-G | Putative chloride channel-like protein CLC-g | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MANVSKKVSW | SGRDRDDEEA | APLLRRTARP | GGGTPLLNGA | GPGAARQSPR | SALFRVGHMS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SVELDDELLD | PDMDPPHPFP | KEIPHNEKLL | SLKYESLDYD | NSENQLFLEE | ERRINHTAFR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TVEIKRWVIC | ALIGILTGLV | ACFIDIVVEN | LAGLKYRVIK | GNIDKFTEKG | GLSFSLLLWA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TLNAAFVLVG | SVIVAFIEPV | AAGSGIPQIK | CFLNGVKIPH | VVRLKTLVIK | VSGVILSVVG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GLAVGKEGPM | IHSGSVIAAG | ISQGRSTSLK | RDFKIFEYFR | RDTEKRDFVS | AGAAAGVSAA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FGAPVGGVLF | SLEEGASFWN | QFLTWRIFFA | SMISTFTLNF | VLSIYHGNMW | DLSSPGLINF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GRFDSEKMAY | TIHEIPVFIA | MGVVGGVLGA | VFNALNYWLT | MFRIRYIHRP | CLQVIEAVLV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| AAVTATVAFV | LIYSSRDCQP | LQGGSMSYPL | QLFCADGEYN | SMAAAFFNTP | EKSVVSLFHD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| PPGSYNPLTL | GLFTLVYFFL | ACWTYGLTVS | AGVFIPSLLI | GAAWGRLFGI | SLSYLTGAAI |
| 550 | 560 | 570 | 580 | 590 | 600 |
| WADPGKYALM | GAAAQLGGIV | RMTLSLTVIM | MEATSNVTYG | FPIMLVLMTA | KIVGDVFIEG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| LYDMHIQLQS | VPFLHWEAPV | TSHSLTAREV | MSTPVTCLRR | REKVGVIVDV | LSDTASNHNG |
| 670 | 680 | 690 | 700 | 710 | 720 |
| FPVVEHADDT | QPARLQGLIL | RSQLIVLLKH | KVFVERSNLG | LVQRRLRLKD | FRDAYPRFPP |
| 730 | 740 | 750 | 760 | 770 | 780 |
| IQSIHVSQDE | RECTMDLSEF | MNPSPYTVPQ | EASLPRVFKL | FRALGLRHLV | VVDNRNQVVG |
| 790 | 800 | ||||
| LVTRKDLARY | RLGKRGLEEL | SLAQT |