P34307
Gene name |
C06G4.1 |
Protein name |
KH domain-containing protein C06G4.1 |
Names |
|
Species |
Caenorhabditis elegans |
KEGG Pathway |
cel:CELE_C06G4.1 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P34307
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P34307-F1 | Predicted | AlphaFoldDB |
No variants for P34307
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P34307 | |||||
No associated diseases with P34307
1 regional properties for P34307
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Transcription factor CBF/NF-Y/archaeal histone domain | 10 - 74 | IPR003958 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| mRNA binding | Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| regulation of mRNA splicing, via spliceosome | Any process that modulates the frequency, rate or extent of mRNA splicing via a spliceosomal mechanism. |
| regulation of transcription by RNA polymerase II | Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P81021 | HDLBP | Vigilin | Gallus gallus (Chicken) | PR |
| Q24009 | BicC | Protein bicaudal C | Drosophila melanogaster (Fruit fly) | PR |
| Q00341 | HDLBP | Vigilin | Homo sapiens (Human) | PR |
| Q15365 | PCBP1 | Poly(rC)-binding protein 1 | Homo sapiens (Human) | PR |
| Q8VDJ3 | Hdlbp | Vigilin | Mus musculus (Mouse) | PR |
| P60335 | Pcbp1 | Poly(rC)-binding protein 1 | Mus musculus (Mouse) | PR |
| Q9Z1A6 | Hdlbp | Vigilin | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAKTKDKSIF | VSSVDSDSDI | EEIIMPPKPP | VEVIQLDDSD | DECQDICKPI | YNKKVHKDPI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VRVSYRQRIP | ESYFPGISTS | LINVQREHNN | RSKYDTWGSN | SCSEPRISIS | NIERLEKPSY |
| 130 | 140 | 150 | 160 | 170 | 180 |
| HEARRVPVFE | RLERSREISN | GRNNQNPIRF | NHKFVPPINR | QTPLFNNQQL | LVNVPFNEHH |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PTFLEPRPFY | RSNVNEYNAG | GLNRGSFRKM | GRLNMEIVRD | NDDFEEHFLA | PNFPAKSASI |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DRRVDDSLSS | NSYLRSGMIM | ASSERLEDPR | FSGRLPVFAR | QINNQEINND | NFYQNSICYN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| HNNYPSNLES | RVSFPFEARH | HDADGLNRGR | YQVMEHVNMG | IMRNSEDFED | YDITQTDQDN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| HFYNDKDSGK | HHRHRHRSKN | NKKHKKHYDR | NESGNSSECR | EEDDYEISNP | SEKRHERKKR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QRSSHRKESA | CVDEDNYILD | EDRFYQQESD | EYHNSLEMER | EYEHGMDVGV | KKEHSYKCDD |
| 490 | 500 | 510 | 520 | 530 | 540 |
| IARNARKRAR | LTDDDMARRE | ELFKEWSYSK | EIVDGVTQLF | GGPPRESERH | QKKQKELVFE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| ADRTAMHALS | IRSGALVKAR | LLEIHYATGC | HLIFLEEVKR | GGYTYVELKG | DPEHIKNAQK |
| 610 | 620 | 630 | 640 | 650 | 660 |
| MIDDMVIDEH | YIHDGRESIV | YFYNAPHELR | NTRGFDLNCR | SIEKYCGIII | EKMREVFGIG |
| 670 | 680 | 690 | 700 | 710 | 720 |
| GYVSTAPLKL | TGSVNSIHMA | RETMQSKTKR | FLDEEKFKET | VEHCTPISFY | RKIIGRCGEN |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LKTIEKVTRT | AIVFKRSFDN | NEACFSIRGR | TDNIKQAIEK | IEEITHENQP | ADDDPGIFQV |
| 790 | 800 | 810 | 820 | 830 | 840 |
| RVPENMVARL | IGRHGVEINR | IRSESKAKCY | LNAIRGNLDD | KFMVCSGGVE | EAAYAAYLTK |
| 850 | 860 | 870 | 880 | ||
| VKIGIIDPKV | IQFNSDDFNN | LSKVKPMEDP | RLVMLKKRYA | ERKECK |