P06396
Gene name |
GSN |
Protein name |
Gelsolin |
Names |
AGEL, Actin-depolymerizing factor, ADF, Brevin |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:2934 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
59 structures for P06396
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1C0F | X-ray | 240 A | S | 53-176 | PDB |
| 1C0G | X-ray | 200 A | S | 53-176 | PDB |
| 1D4X | X-ray | 175 A | G | 52-177 | PDB |
| 1DEJ | X-ray | 240 A | S | 53-176 | PDB |
| 1EQY | X-ray | 230 A | S | 52-176 | PDB |
| 1ESV | X-ray | 200 A | S | 52-176 | PDB |
| 1H1V | X-ray | 300 A | G | 439-769 | PDB |
| 1KCQ | X-ray | 165 A | A | 185-288 | PDB |
| 1MDU | X-ray | 220 A | A/D | 52-176 | PDB |
| 1NLV | X-ray | 180 A | G | 52-176 | PDB |
| 1NM1 | X-ray | 180 A | G | 52-176 | PDB |
| 1NMD | X-ray | 190 A | G | 52-176 | PDB |
| 1P8X | X-ray | 200 A | A/B/C | 439-782 | PDB |
| 1P8Z | X-ray | 260 A | G | 52-187 | PDB |
| 1SOL | NMR | - | A | 177-196 | PDB |
| 1T44 | X-ray | 200 A | G | 55-179 | PDB |
| 1YAG | X-ray | 190 A | G | 52-176 | PDB |
| 1YVN | X-ray | 210 A | G | 52-176 | PDB |
| 2FF3 | X-ray | 200 A | A | 52-179 | PDB |
| 2FF6 | X-ray | 205 A | G | 52-179 | PDB |
| 2FH1 | X-ray | 155 A | A/B/C | 439-782 | PDB |
| 2FH2 | X-ray | 250 A | A/B/C | 439-782 | PDB |
| 2FH3 | X-ray | 287 A | A/B/C | 439-782 | PDB |
| 2FH4 | X-ray | 300 A | A/B/C | 439-782 | PDB |
| 3A5L | X-ray | 240 A | S | 53-176 | PDB |
| 3A5M | X-ray | 240 A | S | 53-176 | PDB |
| 3A5N | X-ray | 236 A | S | 53-176 | PDB |
| 3A5O | X-ray | 240 A | S | 53-176 | PDB |
| 3CI5 | X-ray | 170 A | G | 52-176 | PDB |
| 3CIP | X-ray | 160 A | G | 52-176 | PDB |
| 3CJB | X-ray | 321 A | G | 52-176 | PDB |
| 3CJC | X-ray | 390 A | G | 52-176 | PDB |
| 3FFK | X-ray | 300 A | A/D | 52-426 | PDB |
| 3FFN | X-ray | 300 A | A/B | 1-782 | PDB |
| 3TU5 | X-ray | 300 A | B | 53-174 | PDB |
| 4PKG | X-ray | 180 A | G | 52-176 | PDB |
| 4PKH | X-ray | 215 A | PDB | ||
| 4PKI | X-ray | 230 A | G | 52-176 | PDB |
| 4S10 | X-ray | 261 A | C/D | 186-288 | PDB |
| 4Z94 | X-ray | 240 A | G | 52-176 | PDB |
| 5FAE | X-ray | 170 A | A | 178-293 | PDB |
| 5FAF | X-ray | 105 A | A | 178-293 | PDB |
| 5H3M | NMR | - | A | 55-187 | PDB |
| 5H3N | NMR | - | A | 55-187 | PDB |
| 5O2Z | X-ray | 170 A | A/B | 178-293 | PDB |
| 5UBO | X-ray | 239 A | S | 52-178 | PDB |
| 5ZZ0 | X-ray | 263 A | A/G | 55-188 | PDB |
| 6H1F | X-ray | 190 A | B | 178-293 | PDB |
| 6JCO | X-ray | 288 A | A/B | 56-782 | PDB |
| 6JEG | X-ray | 298 A | A/B | 54-782 | PDB |
| 6JEH | X-ray | 295 A | A/B | 56-782 | PDB |
| 6LJE | X-ray | 140 A | A/B | 297-397 | PDB |
| 6LJF | X-ray | 150 A | A/B | 297-397 | PDB |
| 6Q9R | X-ray | 273 A | A/B | 28-782 | PDB |
| 6Q9Z | X-ray | 380 A | A/B | 28-782 | PDB |
| 6QBF | X-ray | 350 A | A/B | 28-782 | PDB |
| 6QW3 | X-ray | 130 A | A | 178-293 | PDB |
| 7P2B | X-ray | 300 A | A/B | 28-782 | PDB |
| AF-P06396-F1 | Predicted | AlphaFoldDB |
724 variants for P06396
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000723091 rs764841269 RCV002424740 |
4 | H>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001567670 RCV000779569 rs1564468965 |
13 | A>missing | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1048849212 RCV001859097 CA199406388 RCV001169573 |
26 | R>C | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV001169575 rs2059919681 |
50 | N>K | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001859065 RCV001165599 CA5220738 rs138068754 |
54 | V>L | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000365448 CA5220744 RCV000956748 rs115224458 |
61 | K>R | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000330487 CA5220778 rs556563870 |
106 | G>R | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
CA5220812 rs2230287 RCV000276675 VAR_024690 RCV001692064 |
129 | A>T | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA5220824 rs146956976 RCV002328888 RCV000372173 RCV001865245 |
142 | R>W | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001821111 RCV000957620 rs41305623 CA5220873 RCV000282194 |
179 | V>M | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001873548 rs750132751 RCV001167187 CA5220887 |
194 | G>R | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001167188 rs2061027102 |
198 | V>A | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000489240 rs121909715 CA250652 VAR_007718 RCV002362587 COSM1459755 RCV000017564 COSM1459756 |
214 | D>N | large_intestine Variant assessed as Somatic; 4.62e-05 impact. Meretoja syndrome Inborn genetic diseases AMYL5; does not result in actin depolymerization in absence of calcium [Cosmic, NCI-TCGA, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt NCI-TCGA dbSNP gnomAD |
|
CA250654 VAR_007719 rs121909715 RCV000017565 |
214 | D>Y | Meretoja syndrome AMYL5 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt dbSNP gnomAD |
|
RCV001167189 rs2061035565 |
221 | G>A | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001167190 rs11550199 RCV000961960 CA5220933 VAR_061982 |
231 | N>D | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000318498 RCV002523731 CA5220934 rs752698745 |
233 | N>K | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA5220935 rs371175865 RCV001167762 RCV002558654 RCV002365818 |
234 | R>W | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA5221046 RCV000283584 rs745588757 RCV002523732 RCV002481255 |
312 | V>I | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2061970047 RCV001167766 |
356 | K>R | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001167767 CA199411994 rs1014328091 |
384 | G>V | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV002523733 rs372681751 CA5221125 RCV002348120 RCV000343155 |
397 | R>Q | Variant assessed as Somatic; 0.0 impact. Meretoja syndrome Inborn genetic diseases [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA5221158 RCV001879877 RCV002379957 RCV001254007 rs142034230 |
442 | D>N | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA5221194 RCV000390100 rs140042418 RCV002379253 RCV003151049 RCV001729569 |
460 | V>M | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA5221203 RCV002392924 RCV001821112 RCV000398476 rs116185403 RCV000882012 |
481 | R>C | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs2062427908 RCV001265608 |
493 | W>R | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs142828669 RCV002402079 CA5221247 RCV001850932 RCV000314461 |
525 | R>H | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002559587 rs766945413 RCV002393377 RCV001165663 CA5221248 |
526 | V>L | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs139832048 RCV002402080 RCV002061312 RCV000369097 CA5221261 |
547 | Y>C | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV003151050 rs58750568 RCV002061313 RCV000260878 CA5221273 RCV002402081 |
556 | G>R | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs77681311 RCV000297409 CA5221281 RCV002058767 |
563 | T>S | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs780840732 CA5221284 RCV001167255 |
567 | Q>R | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs769400986 CA5221286 RCV000356817 |
569 | R>H | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA5221288 RCV001531107 RCV002402082 RCV000262080 rs147554026 |
570 | A>T | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000376344 RCV002523734 CA5221290 RCV002402084 rs528604896 |
577 | R>Q | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs2063220897 RCV001196370 |
580 | E>K | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001167256 CA5221372 RCV001873550 rs777955781 |
602 | A>T | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs2063344146 RCV001167257 |
604 | L>V | Meretoja syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001821113 rs151208452 RCV000267836 RCV000908629 RCV002411261 CA5221375 |
606 | V>M | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001683444 rs76463933 CA5221385 RCV000322979 |
616 | T>M | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001167841 RCV002067824 CA5221390 rs567372749 RCV002411660 |
627 | A>G | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000890782 RCV001167842 CA5221429 rs9696578 VAR_033958 |
668 | R>L | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs777767455 RCV001167843 CA5221438 |
676 | I>T | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs144434647 RCV000291668 RCV000891402 CA5221470 RCV002418218 |
695 | T>M | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs886063406 RCV000346533 CA10632240 |
699 | M>V | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA10632241 rs886063407 RCV000387049 |
719 | E>K | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs142854368 RCV002068044 COSM1209125 COSM1209126 CA5221528 RCV002418599 RCV001169717 |
733 | T>M | large_intestine Variant assessed as Somatic; 4.62e-05 impact. Meretoja syndrome Inborn genetic diseases [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA5221533 RCV001169718 rs770023727 RCV002558691 |
738 | R>Q | Meretoja syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA5221537 RCV001169719 RCV002559627 rs141510612 RCV001859099 |
741 | R>Q | Meretoja syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA374751228 rs1235742549 |
2 | A>T | No |
ClinGen gnomAD |
|
|
rs1184835172 CA374751299 |
3 | P>L | No |
ClinGen TOPMed |
|
|
rs1184835172 CA374751306 |
3 | P>R | No |
ClinGen TOPMed |
|
|
rs1463497694 CA374751325 |
4 | H>P | No |
ClinGen TOPMed |
|
| TCGA novel | 5 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749593959 CA374751369 |
5 | R>H | No |
ClinGen ExAC |
|
|
rs749593959 CA5220647 |
5 | R>L | No |
ClinGen ExAC |
|
|
rs1318468205 CA374751394 |
7 | A>T | No |
ClinGen TOPMed |
|
|
CA374751408 rs1245547667 |
7 | A>V | No |
ClinGen TOPMed |
|
|
rs564685016 CA199406379 |
8 | P>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA199406378 rs945394105 |
8 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA374751448 rs935992317 |
9 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA199406380 rs935992317 |
9 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1490726666 CA374751453 |
9 | A>V | No |
ClinGen gnomAD |
|
|
CA374751530 rs1199158051 |
12 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
rs939586966 CA199406382 |
13 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA374751627 rs1474343090 |
15 | S>F | No |
ClinGen gnomAD |
|
|
CA374751611 rs1285468090 |
15 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1474343090 CA374751624 |
15 | S>Y | No |
ClinGen gnomAD |
|
|
rs1169568400 CA374751638 |
16 | L>P | No |
ClinGen gnomAD |
|
|
rs1055331867 CA199406383 |
17 | A>V | No |
ClinGen TOPMed |
|
|
rs1323274867 CA374751699 |
19 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1306972736 CA374751700 |
19 | C>Y | No |
ClinGen TOPMed |
|
|
CA374751738 rs1202263036 |
20 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs772098788 CA5220652 |
20 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1202263036 CA374751733 |
20 | A>V | No |
ClinGen TOPMed gnomAD |
|
| VAR_036337 | 22 | S>L | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
rs1462234420 CA374751942 |
26 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs900305697 CA199406389 |
29 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA199406391 rs1048939391 |
30 | A>V | No |
ClinGen TOPMed |
|
|
CA199406392 rs528919299 |
32 | R>W | No |
ClinGen 1000Genomes |
|
|
CA374752116 rs1203309936 |
35 | S>F | No |
ClinGen TOPMed |
|
|
rs1210058398 CA374752224 |
38 | G>R | No |
ClinGen gnomAD |
|
|
rs761582266 CA5220659 |
39 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1445044902 CA374752268 |
39 | A>V | No |
ClinGen gnomAD |
|
|
CA5220660 rs764629393 |
40 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749989175 CA5220661 |
41 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757935497 CA5220662 |
42 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5220664 rs781621950 |
44 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA5220665 rs753207938 |
45 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1384582534 CA374752446 |
45 | P>L | No |
ClinGen gnomAD |
|
|
rs376281622 CA5220667 |
47 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5220668 rs376281622 |
47 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5220669 rs771227467 |
48 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374752520 rs771227467 |
48 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374752512 rs1366403896 |
48 | R>W | No |
ClinGen gnomAD |
|
|
rs781185807 CA5220734 |
49 | P>R | No |
ClinGen ExAC |
|
|
rs1429627213 CA374730619 |
49 | P>S | No |
ClinGen gnomAD |
|
|
rs1367109054 CA374730634 |
50 | N>S | No |
ClinGen gnomAD |
|
|
CA5220737 rs777717306 |
51 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA374730660 rs1314373375 |
51 | S>R | No |
ClinGen gnomAD |
|
|
rs770721652 CA5220739 |
56 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5220740 rs778466648 CA374730791 |
56 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs770721652 CA374730767 |
56 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745577813 CA5220741 |
57 | P>H | No |
ClinGen ExAC gnomAD |
|
|
COSM1597937 CA5220743 rs143781307 COSM1104764 |
58 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed |
|
CA374730892 rs1381677178 |
60 | L>P | No |
ClinGen TOPMed |
|
| TCGA novel | 69 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5220748 rs773880178 |
70 | I>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 71 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5220749 rs373791435 |
72 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5220750 rs766916675 |
72 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1270868915 CA374731375 |
74 | E>G | No |
ClinGen gnomAD |
|
|
RCV000880984 CA5220752 rs149415778 |
76 | F>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5220751 rs751817104 |
76 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs752677417 CA374731491 |
77 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752677417 CA5220754 |
77 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752677417 CA5220755 |
77 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777625727 COSM3721993 CA5220756 COSM3721991 |
78 | L>M | upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1487723595 CA374731551 |
78 | L>P | No |
ClinGen TOPMed |
|
|
rs149556868 CA199406939 |
80 | P>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA5220759 rs778740783 |
81 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374731676 rs778740783 |
81 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199406941 rs376961112 |
81 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP NCI-TCGA TOPMed gnomAD |
|
CA374731713 rs1588955024 |
83 | T>P | No |
ClinGen Ensembl |
|
|
rs758028847 CA5220761 |
84 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746456127 CA5220763 |
85 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA5220764 rs144219139 |
88 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144219139 CA374731853 |
88 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5220766 rs749868096 |
91 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1164365786 CA374732104 |
93 | D>G | No |
ClinGen TOPMed |
|
|
rs759975420 CA5220769 |
93 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148748121 CA5220771 |
94 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA374732125 rs148748121 |
94 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1472775852 CA374732152 |
94 | A>V | No |
ClinGen gnomAD |
|
|
rs1175400045 CA374732155 |
95 | Y>H | No |
ClinGen gnomAD |
|
|
rs1399829665 CA374732159 |
95 | Y>S | No |
ClinGen gnomAD |
|
|
CA5220773 rs142305374 |
96 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1359811866 CA374732198 |
97 | I>V | No |
ClinGen gnomAD |
|
|
rs1409351649 CA374732236 |
98 | L>Q | No |
ClinGen gnomAD |
|
|
rs1409351649 CA374732240 |
98 | L>R | No |
ClinGen gnomAD |
|
|
CA5220774 rs753766003 |
99 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1229267148 CA374732298 |
102 | Q>* | No |
ClinGen gnomAD |
|
|
CA5220776 rs764988664 |
104 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1358284064 CA374732398 |
107 | N>S | No |
ClinGen gnomAD |
|
|
rs1202456111 CA374732430 |
109 | Q>* | No |
ClinGen gnomAD |
|
|
CA374732454 rs1483153444 |
110 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs779516701 CA5220779 |
110 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA5220781 rs754531071 |
113 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA374732690 rs1564481095 |
116 | L>R | No |
ClinGen Ensembl |
|
|
CA374733169 rs373229223 |
118 | N>K | No |
ClinGen ESP TOPMed |
|
|
CA5220801 rs755696871 |
119 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
rs779217957 CA5220802 |
119 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 120 | C>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374733372 rs1352951650 |
122 | Q>R | No |
ClinGen TOPMed |
|
|
CA5220805 rs369305328 |
126 | G>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs369305328 CA374733623 |
126 | G>W | No |
ClinGen ESP ExAC gnomAD |
|
|
RCV000969559 CA5220808 RCV000610660 rs79630438 |
127 | A>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1588966254 CA374733740 |
129 | A>V | No |
ClinGen Ensembl |
|
|
rs766055612 CA5220813 |
130 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5220814 rs145441439 |
132 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374733842 rs1291179077 |
132 | T>I | No |
ClinGen TOPMed |
|
|
CA5220817 rs752400851 |
133 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA374733923 rs1190417217 |
135 | L>P | No |
ClinGen gnomAD |
|
|
rs1418730040 CA374733927 |
136 | D>N | No |
ClinGen Ensembl |
|
|
CA5220818 rs755676763 |
136 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199407154 rs965919012 |
140 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA5220819 rs777396943 |
140 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs750877079 CA5220822 |
141 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5220823 rs758988443 |
141 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5220826 rs138153246 |
142 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5220825 rs138153246 |
142 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374734070 rs1487454769 |
143 | A>T | No |
ClinGen TOPMed |
|
|
rs760357425 CA5220829 |
144 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760357425 CA5220828 |
144 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1330955642 CA374734187 |
146 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs201920706 CA5220831 |
147 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs866179533 CA199407163 |
147 | R>S | No |
ClinGen Ensembl |
|
|
CA374734253 rs1327109872 |
148 | E>A | No |
ClinGen TOPMed |
|
|
CA5220832 rs770851113 |
148 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1341747390 CA374734299 |
149 | V>A | No |
ClinGen gnomAD |
|
|
CA374734343 rs1564486321 |
151 | G>A | No |
ClinGen Ensembl |
|
|
rs1245060312 CA374734324 |
151 | G>S | No |
ClinGen gnomAD |
|
|
rs759334030 CA5220834 |
153 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs895304313 CA199407167 |
153 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA5220835 rs767484600 |
154 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA374734465 rs865879074 |
155 | A>S | No |
ClinGen Ensembl |
|
|
CA199407171 rs865879074 |
155 | A>T | No |
ClinGen Ensembl |
|
|
rs1482856276 CA374734475 |
156 | T>P | No |
ClinGen gnomAD |
|
|
CA374734565 rs1588968072 |
158 | L>Q | No |
ClinGen Ensembl |
|
|
rs367933536 CA5220837 |
159 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs903705821 CA199407174 |
161 | F>L | No |
ClinGen TOPMed |
|
|
rs1254094633 CA374734757 |
163 | S>F | No |
ClinGen gnomAD |
|
|
CA5220838 rs763484567 |
164 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 165 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753352592 CA374734785 |
165 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5220839 rs753352592 |
165 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199407177 rs1000625882 |
168 | K>E | No |
ClinGen TOPMed |
|
|
CA374738633 rs1255341820 |
171 | G>D | No |
ClinGen TOPMed |
|
|
CA374738630 rs1273939404 |
171 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 173 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs951335049 CA199408663 |
173 | A>V | No |
ClinGen Ensembl |
|
|
CA374738695 rs1211363476 |
175 | G>E | No |
ClinGen TOPMed |
|
|
rs1589047561 CA374738741 |
177 | K>N | No |
ClinGen Ensembl |
|
|
CA374738755 rs1404581758 |
178 | H>L | No |
ClinGen gnomAD |
|
|
rs772098646 CA5220871 |
178 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA199408668 rs41305623 |
179 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5220876 rs761433282 |
181 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs186654124 CA5220878 |
182 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1188488372 CA374738811 |
182 | N>S | No |
ClinGen gnomAD |
|
|
CA5220879 rs762471492 |
183 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs368197143 CA5220881 |
184 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM4148855 rs368197143 CA5220880 COSM4148853 |
184 | V>M | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1348987724 CA374738865 |
185 | V>G | No |
ClinGen gnomAD |
|
|
rs1479110297 CA374738855 |
185 | V>L | No |
ClinGen Ensembl |
|
|
CA374738867 rs1456094623 |
186 | V>L | No |
ClinGen gnomAD |
|
|
rs761093581 CA5220882 |
188 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1035757795 CA199408677 |
189 | L>I | No |
ClinGen Ensembl |
|
|
CA374738937 rs1338898955 |
190 | F>L | No |
ClinGen TOPMed |
|
|
rs764421030 CA5220883 |
190 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs754064038 CA5220884 |
191 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs144099356 CA5220890 |
195 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA199408687 rs138951454 |
195 | R>W | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1246783224 CA374739038 |
196 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA5220891 rs141314418 |
196 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA374739044 rs141314418 |
196 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5220892 rs141314418 |
196 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs958814554 CA199408691 |
197 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA5220893 rs747805751 |
199 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs150617780 CA5220894 |
199 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| VAR_036338 | 201 | T>I | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
CA374739141 rs772864569 |
202 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374739128 rs1260779243 |
202 | E>K | No |
ClinGen TOPMed |
|
|
rs1321392168 CA374739150 |
203 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA374739176 rs1564516294 |
205 | V>M | No |
ClinGen Ensembl |
|
|
rs770494341 CA374739225 |
211 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770494341 CA5220897 |
211 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1355688870 CA374739236 |
213 | G>S | No |
ClinGen TOPMed |
|
|
rs764485751 CA5220900 |
218 | L>P | No |
ClinGen ExAC |
|
|
CA5220901 rs754109131 |
219 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA5220902 rs762294366 |
222 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1309900188 CA374740141 |
224 | I>F | No |
ClinGen gnomAD |
|
|
CA374740136 rs1309900188 |
224 | I>V | No |
ClinGen gnomAD |
|
|
CA5220931 rs751554478 |
225 | H>D | No |
ClinGen ExAC gnomAD |
|
|
CA199409038 rs1016283058 |
226 | Q>R | No |
ClinGen Ensembl |
|
|
CA199409040 rs772654323 |
227 | W>* | No |
ClinGen Ensembl |
|
|
rs1426401845 CA374740471 |
231 | N>S | No |
ClinGen TOPMed |
|
|
rs375589943 CA374740551 |
234 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375589943 CA5220936 |
234 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1423027604 CA374740567 |
235 | Y>C | No |
ClinGen gnomAD |
|
|
CA374740667 rs1416138918 |
240 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA374740693 rs1175548472 |
241 | T>R | No |
ClinGen gnomAD |
|
|
CA5220938 rs756817108 |
243 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs533077767 CA5220939 |
245 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA374740815 rs1443435223 |
247 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA5220940 rs745312507 |
248 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5220942 rs777277538 |
251 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs774085705 CA5220943 |
252 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1014829124 CA199409052 |
252 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1202569303 CA374740945 |
253 | S>G | No |
ClinGen gnomAD |
|
|
rs770261155 CA5220944 |
253 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs766464271 CA5220947 |
255 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763444610 CA5220946 |
255 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA5220948 rs774635796 |
256 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs376060588 CA5220949 |
257 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5220950 rs767693759 |
257 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs752607226 CA5220951 |
259 | H>Y | No |
ClinGen ExAC |
|
|
CA5220954 rs753578683 |
260 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA5220953 rs570834330 |
260 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA374740995 rs1261678254 |
262 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs369788495 CA5220955 RCV000903292 |
262 | E>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs371320840 CA5220957 |
264 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA374741055 rs1304879848 |
265 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA374741053 rs1304879848 |
265 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA374741076 rs1564524204 |
267 | P>S | No |
ClinGen Ensembl |
|
|
CA5220959 rs779759717 |
268 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA5220958 rs757836648 |
268 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs748635328 CA5220960 |
269 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs923896672 CA199409073 |
270 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA5220962 rs773878610 |
271 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA5220963 rs374011467 |
271 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374742439 rs1351451024 |
275 | G>D | No |
ClinGen gnomAD |
|
|
rs1486745626 CA374742457 |
276 | P>L | No |
ClinGen gnomAD |
|
|
rs766073307 CA5220993 |
276 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199409352 rs202067009 |
278 | P>L | No |
ClinGen 1000Genomes gnomAD |
|
|
CA374742483 rs1390359509 |
278 | P>T | No |
ClinGen TOPMed |
|
|
rs1161887525 CA374742501 |
279 | A>T | No |
ClinGen gnomAD |
|
|
rs139723535 CA199409359 |
281 | P>L | No |
ClinGen ESP TOPMed |
|
|
CA5220996 rs780898402 |
282 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA5220997 rs754268709 |
282 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1376747926 CA374742529 |
284 | T>A | No |
ClinGen gnomAD |
|
|
CA374742533 rs1434943560 |
284 | T>I | No |
ClinGen gnomAD |
|
|
COSM1554044 rs779305948 COSM1554043 CA5220999 |
285 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1197270565 CA374742541 |
286 | D>N | No |
ClinGen TOPMed |
|
|
rs376744130 CA5221001 |
288 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221002 rs780252276 |
288 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221003 rs747292895 |
289 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs1490724180 CA374742570 |
290 | E>G | No |
ClinGen TOPMed |
|
|
rs768703573 CA5221004 |
291 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs144375242 CA5221007 |
292 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221005 rs150568054 |
292 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs150568054 CA374742581 |
292 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs144375242 CA5221006 |
292 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1459758 rs1479845895 COSM1459757 CA374742588 |
293 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA5221009 rs188214536 |
295 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs766602997 CA5221011 |
295 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766602997 CA5221010 |
295 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374742614 rs752197819 |
298 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA5221014 rs752197819 |
298 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1167536004 CA374742620 |
299 | K>E | No |
ClinGen gnomAD |
|
|
rs765705498 CA5221016 |
299 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA374742623 rs1368917811 |
299 | K>R | No |
ClinGen TOPMed |
|
|
rs758752620 CA5221018 |
301 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA5221017 rs750961577 |
301 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA5221019 rs780450190 |
302 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221020 rs148800857 |
302 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs148800857 CA374742640 |
302 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs113759985 CA199409909 |
303 | V>I | No |
ClinGen Ensembl |
|
|
CA5221039 rs781410046 |
304 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs756193920 CA5221041 |
305 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748387609 CA5221040 |
305 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs777753023 CA5221042 |
306 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs867786838 CA199409915 |
307 | A>G | No |
ClinGen TOPMed |
|
|
CA374742933 rs1418309924 |
307 | A>T | No |
ClinGen gnomAD |
|
|
rs770943559 CA5221044 |
310 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374743045 rs1156902746 |
310 | M>V | No |
ClinGen gnomAD |
|
|
rs1433029387 CA374743100 |
311 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA374743156 rs1381551968 |
313 | S>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 313 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1336006305 CA374743184 |
315 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA5221049 rs760297403 |
316 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs768184900 CA5221050 |
320 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA5221052 rs761334580 |
322 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1589117317 CA374743528 |
324 | G>A | No |
ClinGen Ensembl |
|
|
rs766813999 CA5221053 |
324 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs766813999 CA374743523 |
324 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs1189708434 CA374743534 |
325 | A>S | No |
ClinGen gnomAD |
|
|
CA374743531 rs1189708434 |
325 | A>T | No |
ClinGen gnomAD |
|
|
CA374743609 rs1211183624 |
327 | K>N | No |
ClinGen gnomAD |
|
|
CA374743598 rs1315500359 |
327 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA5221054 rs752067290 |
328 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA5221056 rs767818971 |
329 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA5221057 rs752931457 |
330 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs142435036 CA199409930 |
332 | F>L | No |
ClinGen ESP TOPMed |
|
|
CA5221058 rs756249390 |
333 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1257832427 CA374743793 |
335 | D>Y | No |
ClinGen TOPMed |
|
|
rs1053679845 CA199409933 |
336 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs151155909 CA5221061 |
337 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA374743901 rs1589118051 |
338 | K>R | No |
ClinGen Ensembl |
|
|
CA374743918 rs1464985912 |
339 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA374743921 rs1464985912 |
339 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA374744039 rs1357160738 |
343 | F>S | No |
ClinGen TOPMed |
|
|
rs745847678 CA5221063 |
345 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs771881247 CA5221064 |
345 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs779756580 CA374744234 |
346 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 347 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1210206008 CA374745347 |
348 | K>N | No |
ClinGen TOPMed |
|
|
rs1469592806 CA374745448 |
352 | T>M | No |
ClinGen TOPMed |
|
| TCGA novel | 354 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374745495 rs1193720408 |
354 | E>K | No |
ClinGen gnomAD |
|
|
rs1318739041 CA374745648 |
359 | L>V | No |
ClinGen TOPMed |
|
|
CA374745673 rs1589128597 |
360 | K>* | No |
ClinGen Ensembl |
|
|
CA374745719 rs1280142330 |
361 | T>I | No |
ClinGen TOPMed |
|
|
CA5221091 rs776069055 |
361 | T>P | No |
ClinGen ExAC gnomAD |
|
|
rs760942439 CA5221092 |
362 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1195531709 CA374745731 |
362 | A>V | No |
ClinGen gnomAD |
|
|
rs1475171830 CA374745752 |
363 | S>C | No |
ClinGen gnomAD |
|
|
CA199411940 rs139028645 |
367 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221093 rs139028645 |
367 | T>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1589128937 CA374745856 |
367 | T>S | No |
ClinGen Ensembl |
|
|
CA374745889 rs1302495551 |
368 | K>N | No |
ClinGen TOPMed |
|
|
rs1589129073 CA374745959 |
370 | D>E | No |
ClinGen Ensembl |
|
|
rs776968977 CA5221094 |
373 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA5221095 rs762168001 |
373 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs925879761 CA374746088 |
374 | Q>P | No |
ClinGen TOPMed |
|
|
rs925879761 CA199411943 |
374 | Q>R | No |
ClinGen TOPMed |
|
|
CA199411983 rs922617464 |
378 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA374746368 rs922617464 |
378 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA374746393 rs1413806267 |
379 | V>L | No |
ClinGen gnomAD |
|
|
rs1157815026 CA374746482 |
381 | P>L | No |
ClinGen TOPMed |
|
|
CA199411988 rs897244135 |
381 | P>S | No |
ClinGen TOPMed |
|
|
CA5221116 rs773492890 |
382 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA374746556 rs1233798637 |
383 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs751431867 CA374746591 |
384 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751431867 CA5221119 |
384 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374746619 rs1286444385 |
385 | E>A | No |
ClinGen gnomAD |
|
|
CA5221120 rs759427135 |
386 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199411996 rs866780606 |
388 | L>P | No |
ClinGen Ensembl |
|
|
CA374746891 rs1564550129 |
394 | K>E | No |
ClinGen Ensembl |
|
|
CA374746928 rs1213702142 |
394 | K>N | No |
ClinGen TOPMed |
|
|
CA374746953 rs1476420188 |
395 | N>I | No |
ClinGen gnomAD |
|
|
CA374746948 rs1476420188 |
395 | N>S | No |
ClinGen gnomAD |
|
|
rs372681751 CA5221124 |
397 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221123 rs755904287 COSM3745808 COSM3745810 |
397 | R>W | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs756698562 CA374747050 |
398 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs756698562 CA5221126 |
398 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA374747040 rs1159740643 |
398 | D>N | No |
ClinGen gnomAD |
|
|
CA5221128 rs367632035 |
400 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs769238518 CA5221129 |
401 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 402 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5221130 rs781768258 |
402 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748457545 CA5221131 |
403 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA5221132 rs770264538 |
404 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA374747367 rs1589132408 |
405 | L>P | No |
ClinGen Ensembl |
|
|
rs1170736480 CA374747390 |
406 | G>D | No |
ClinGen gnomAD |
|
|
CA5221133 rs773296433 |
407 | L>F | No |
ClinGen ExAC |
|
|
CA374747434 rs1589132580 |
408 | S>A | No |
ClinGen Ensembl |
|
|
CA374747449 rs1589132623 |
408 | S>C | No |
ClinGen Ensembl |
|
|
CA374747436 rs1589132580 |
408 | S>T | No |
ClinGen Ensembl |
|
|
rs763288677 CA5221134 |
409 | Y>S | No |
ClinGen ExAC |
|
|
CA5221135 rs770887416 |
410 | L>F | No |
ClinGen ExAC |
|
|
CA5221136 rs75508371 |
411 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA199412018 rs370764119 |
412 | S>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA374747620 rs1032894158 |
413 | H>L | No |
ClinGen TOPMed |
|
|
CA199412021 rs1032894158 |
413 | H>R | No |
ClinGen TOPMed |
|
|
CA5221140 rs747287341 |
414 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1278510076 CA374747636 |
414 | I>S | No |
ClinGen gnomAD |
|
|
rs1415084790 CA374747627 |
414 | I>V | No |
ClinGen gnomAD |
|
|
CA374747646 rs1368901887 |
415 | A>G | No |
ClinGen gnomAD |
|
|
rs763998109 CA5221142 |
415 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs753400828 CA199412026 |
416 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375323203 CA5221144 |
417 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221148 rs781764487 |
419 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757987371 CA5221147 |
419 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374747689 rs1376840693 |
421 | P>L | No |
ClinGen gnomAD |
|
|
CA5221149 rs200018246 |
423 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1377703104 CA374747708 |
424 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
COSM1209124 CA374747705 rs1307675236 COSM1209123 |
424 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA374747712 rs1301367568 |
425 | A>T | No |
ClinGen gnomAD |
|
|
rs1589133701 CA374747717 |
426 | T>P | No |
ClinGen Ensembl |
|
|
rs1589133789 CA374747736 |
429 | T>P | No |
ClinGen Ensembl |
|
|
CA374747747 rs1234250509 |
430 | S>F | No |
ClinGen gnomAD |
|
|
rs376180600 CA5221152 |
433 | M>V | No |
ClinGen ESP ExAC |
|
| TCGA novel | 435 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774557384 CA5221154 |
436 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA199412042 rs910097928 |
436 | Q>H | No |
ClinGen Ensembl |
|
|
rs1263115622 CA374747833 |
437 | H>R | No |
ClinGen TOPMed |
|
| TCGA novel | 438 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372218880 CA5221156 |
438 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374747931 rs1239273199 |
439 | M>I | No |
ClinGen gnomAD |
|
|
rs147583697 CA374748019 |
441 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1564552641 CA374748043 |
442 | D>G | No |
ClinGen Ensembl |
|
|
CA5221159 rs142034230 |
442 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221160 rs376488491 |
445 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1169376046 CA374748131 |
446 | Q>H | No |
ClinGen gnomAD |
|
|
rs368537807 CA5221162 |
448 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221188 rs754356800 |
449 | I>V | No |
ClinGen ExAC |
|
|
CA374749343 rs1355287098 |
450 | W>* | No |
ClinGen gnomAD |
|
|
rs1231970638 CA374749396 |
452 | I>T | No |
ClinGen gnomAD |
|
|
rs1167869287 CA374749387 |
452 | I>V | No |
ClinGen TOPMed |
|
|
rs368079865 CA5221190 |
453 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221191 rs746261304 |
456 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs891734906 CA199412789 |
458 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1256527346 CA374749556 |
459 | P>L | No |
ClinGen gnomAD |
|
|
COSM1193481 COSM1193482 CA374749553 rs1256527346 |
459 | P>R | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA374749545 rs1564563931 |
459 | P>S | No |
ClinGen Ensembl |
|
|
rs140042418 CA5221195 |
460 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1589156673 CA374749615 |
461 | D>A | No |
ClinGen Ensembl |
|
|
rs1400051321 CA374749651 |
462 | P>L | No |
ClinGen gnomAD |
|
|
rs776618806 CA5221196 |
462 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs914956728 CA199412800 |
463 | A>D | No |
ClinGen Ensembl |
|
|
rs1249750610 CA374749707 |
465 | Y>H | No |
ClinGen TOPMed |
|
|
rs1421738271 CA374749745 |
467 | Q>* | No |
ClinGen gnomAD |
|
|
CA374749772 COSM368230 rs1299082302 CA374749773 |
468 | F>L | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA5221198 rs375227932 |
469 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221201 rs762866677 |
472 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA5221202 rs770637286 |
473 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA374749896 rs1318264424 |
474 | Y>C | No |
ClinGen gnomAD |
|
|
rs1564564688 CA374749888 |
474 | Y>H | No |
ClinGen Ensembl |
|
|
rs1368620778 CA374749957 |
479 | N>D | No |
ClinGen TOPMed |
|
|
rs759068282 CA5221204 |
481 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA374749987 rs116185403 |
481 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148309276 CA374750019 |
483 | G>A | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5221205 rs148309276 |
483 | G>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA199412816 rs368923816 |
485 | R>C | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA374750050 rs1469557211 |
485 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1469557211 CA374750047 |
485 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1428666233 CA374750076 |
487 | G>R | No |
ClinGen TOPMed |
|
|
rs1405855644 CA374750094 |
488 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
CA374750114 rs1433255271 |
489 | I>V | No |
ClinGen TOPMed |
|
|
rs1051993391 CA199412825 |
491 | Y>C | No |
ClinGen Ensembl |
|
|
CA374750184 rs1377489093 |
492 | N>K | No |
ClinGen TOPMed |
|
|
rs1554821138 RCV000585506 |
493 | W>missing | No |
ClinVar dbSNP |
|
|
CA199413719 rs897058765 |
493 | W>* | No |
ClinGen gnomAD |
|
|
rs1403028783 CA374751808 |
496 | A>V | No |
ClinGen gnomAD |
|
|
CA199413721 rs759150461 |
497 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374751854 rs1360884907 |
497 | Q>R | No |
ClinGen TOPMed |
|
|
CA5221223 rs576601788 |
499 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs141406100 CA5221224 |
501 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753446615 CA199413727 |
501 | D>G | No |
ClinGen Ensembl |
|
| TCGA novel | 502 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1597934 rs760189867 COSM1104769 CA5221225 |
504 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA374752152 rs1212537433 |
506 | S>F | No |
ClinGen gnomAD |
|
|
CA199413735 rs1024248414 |
509 | L>V | No |
ClinGen gnomAD |
|
|
CA374752194 rs1252438083 |
510 | T>A | No |
ClinGen gnomAD |
|
|
CA374752219 rs1467236913 |
510 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA374752240 rs1201243869 |
511 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1242355446 CA374752252 |
512 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1475224120 CA374752306 |
514 | D>G | No |
ClinGen gnomAD |
|
|
rs1247472167 CA374752298 |
514 | D>Y | No |
ClinGen gnomAD |
|
|
rs1185072507 CA374752353 |
515 | E>D | No |
ClinGen gnomAD |
|
|
CA891862808 RCV000723078 rs1564578803 |
515 | E>Y | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs145721476 CA199413740 |
518 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs866830834 CA199413743 |
519 | G>S | No |
ClinGen Ensembl |
|
|
rs1164890169 CA374752441 |
520 | T>P | No |
ClinGen gnomAD |
|
|
CA374752522 rs868596277 |
523 | Q>L | No |
ClinGen TOPMed |
|
|
CA199413744 rs868596277 |
523 | Q>R | No |
ClinGen TOPMed |
|
|
rs370997492 CA5221245 |
524 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138341672 CA5221246 |
525 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374753776 COSM607488 rs1255853000 COSM1145200 |
526 | V>A | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs766945413 CA374753764 |
526 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1444630911 CA374753806 |
528 | Q>P | No |
ClinGen gnomAD |
|
|
rs774534165 CA5221249 |
529 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221250 rs774534165 |
529 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs539994421 CA199414351 |
530 | K>R | No |
ClinGen 1000Genomes |
|
|
rs1468193571 CA374753904 |
532 | P>T | No |
ClinGen gnomAD |
|
|
CA5221253 rs375902120 |
533 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221254 rs764305490 |
536 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA374754142 rs1404151409 |
538 | L>R | No |
ClinGen gnomAD |
|
|
CA5221255 rs754001558 |
540 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs146125870 CA199414357 |
540 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA374754189 rs146125870 |
540 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1564588065 CA374754289 |
543 | P>S | No |
ClinGen Ensembl |
|
|
CA5221258 rs757093131 |
544 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221259 rs778921459 |
546 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs779561679 CA5221262 |
549 | G>C | No |
ClinGen ExAC gnomAD |
|
|
COSM1104770 COSM1155063 CA374754501 rs776082855 |
550 | G>D | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs768124486 CA5221264 |
550 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776082855 CA5221265 |
550 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA374754516 rs1589217752 COSM4152026 COSM4152024 |
551 | T>P | ovary [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA5221267 rs544227689 |
553 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5221269 rs771287868 |
553 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs771287868 CA5221268 |
553 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs544227689 CA374754546 |
553 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1331062884 CA374754584 |
554 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs998869731 CA199414377 |
554 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA5221271 rs767972089 |
555 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs890249849 CA199414384 |
557 | Q>R | No |
ClinGen Ensembl |
|
|
CA374754641 rs1475977136 |
558 | T>I | No |
ClinGen TOPMed |
|
|
CA374754644 rs1375261642 |
559 | A>P | No |
ClinGen TOPMed |
|
|
rs1375261642 CA374754643 |
559 | A>T | No |
ClinGen TOPMed |
|
|
rs1564589327 CA374754657 |
560 | P>L | No |
ClinGen Ensembl |
|
|
rs1432630136 CA374754653 |
560 | P>S | No |
ClinGen TOPMed |
|
|
CA5221277 rs757360429 |
561 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA5221278 rs765080819 |
562 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA5221279 rs750434657 |
563 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA5221280 rs750434657 |
563 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA5221282 rs746839611 |
564 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221283 rs148410442 |
564 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA374754798 rs1268976636 |
567 | Q>* | No |
ClinGen gnomAD |
|
|
rs747549477 CA5221285 |
567 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1371185672 CA374754851 |
569 | R>C | No |
ClinGen gnomAD |
|
|
CA374754909 rs1460940265 |
570 | A>V | No |
ClinGen gnomAD |
|
|
rs1291889856 CA374754921 |
571 | N>S | No |
ClinGen gnomAD |
|
|
CA374754942 rs1170483452 |
572 | S>G | No |
ClinGen Ensembl |
|
|
rs1387577221 CA374755000 |
573 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1387577221 CA374754995 |
573 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA199414411 rs950375539 |
574 | G>A | No |
ClinGen TOPMed |
|
|
rs1295283907 CA374755025 |
574 | G>R | No |
ClinGen gnomAD |
|
|
CA5221291 rs528604896 |
577 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1220983184 CA374755115 |
577 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1334804023 CA374755131 |
578 | A>T | No |
ClinGen gnomAD |
|
|
rs1564590725 CA374755193 |
579 | V>D | No |
ClinGen Ensembl |
|
|
rs768932104 CA5221292 |
579 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1299811917 CA374755538 |
581 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA374755547 rs1589226696 |
582 | L>M | No |
ClinGen Ensembl |
|
|
CA5221362 rs371993530 |
583 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374755595 rs1283666554 |
585 | A>V | No |
ClinGen gnomAD |
|
|
rs1230214570 CA374755604 |
586 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA5221366 rs761517749 |
591 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs776392493 CA5221364 |
591 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs749896585 CA5221367 |
592 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374755697 rs1488902911 |
593 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA374755699 rs1488902911 |
593 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1187511879 CA374755730 |
596 | L>V | No |
ClinGen gnomAD |
|
|
rs1473465931 CA374755741 |
597 | K>E | No |
ClinGen gnomAD |
|
|
rs184844415 CA5221368 |
597 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5221369 rs376326631 |
598 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1589227248 CA374755753 |
598 | T>P | No |
ClinGen Ensembl |
|
|
CA374755771 rs1417499787 |
599 | P>H | No |
ClinGen gnomAD |
|
|
rs201307081 CA5221370 |
600 | S>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 600 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA199414681 rs1003206299 |
601 | A>V | No |
ClinGen Ensembl |
|
|
CA374755826 rs1564595242 |
604 | L>Q | No |
ClinGen Ensembl |
|
|
rs144259173 CA5221374 |
605 | W>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221373 rs754218870 |
605 | W>L | No |
ClinGen ExAC gnomAD |
|
|
rs1589227679 CA374755854 |
606 | V>G | No |
ClinGen Ensembl |
|
|
rs772099624 CA5221377 |
609 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1022049924 CA199414698 |
610 | A>T | No |
ClinGen Ensembl |
|
|
CA374755902 rs1260330171 |
611 | S>G | No |
ClinGen TOPMed |
|
| VAR_036339 | 611 | S>N | a breast cancer sample; somatic mutation [UniProt] | No | UniProt |
|
rs746958954 CA374755931 CA374755934 |
612 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA374755920 rs1288565137 |
612 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs368207411 CA5221382 |
615 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221383 rs761716107 |
615 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221384 rs533621038 |
616 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs535229743 CA199414718 |
618 | A>P | No |
ClinGen Ensembl |
|
|
rs535229743 CA199414716 |
618 | A>T | No |
ClinGen Ensembl |
|
|
rs1589228278 CA374755997 |
619 | Q>L | No |
ClinGen Ensembl |
|
|
CA5221388 rs753221509 |
623 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199414725 rs1054334677 |
624 | V>L | No |
ClinGen TOPMed |
|
|
rs1170622927 CA374756033 |
625 | L>P | No |
ClinGen gnomAD |
|
|
rs572579017 CA5221389 |
626 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404195872 CA374756036 |
626 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1337468572 CA374756039 |
627 | A>T | No |
ClinGen gnomAD |
|
|
rs1232909780 CA374756083 |
633 | A>T | No |
ClinGen gnomAD |
|
|
CA5221391 rs754132863 |
634 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs930463647 CA199414743 |
637 | E>K | No |
ClinGen Ensembl |
|
|
rs779678517 CA199414745 |
638 | P>L | No |
ClinGen Ensembl |
|
| TCGA novel | 639 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374757385 rs1564602892 |
639 | D>V | No |
ClinGen Ensembl |
|
|
CA5221393 rs757684181 |
639 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374757397 rs1262489917 |
640 | G>D | No |
ClinGen gnomAD |
|
|
rs1589242701 CA374757404 |
641 | F>L | No |
ClinGen Ensembl |
|
|
CA5221416 rs755154034 |
641 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA5221420 rs531299160 |
646 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs141082919 CA5221422 |
647 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA374757511 rs1589243053 |
649 | A>T | No |
ClinGen Ensembl |
|
|
CA5221423 rs770419491 |
650 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374757536 rs1314268647 |
651 | Y>H | No |
ClinGen gnomAD |
|
|
CA5221424 rs765486168 |
652 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA199415182 rs894352373 |
652 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA374757578 rs1472143900 |
654 | S>F | No |
ClinGen TOPMed |
|
|
rs1237553449 CA374757589 |
655 | P>L | No |
ClinGen TOPMed |
|
|
rs200319453 CA199415187 |
656 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs745355314 CA5221425 |
656 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA374757615 rs1455727437 |
658 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
CA5221427 rs536159272 |
659 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA374757640 rs1564603859 |
660 | K>E | No |
ClinGen Ensembl |
|
|
CA5221428 rs762267106 |
663 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374757696 rs762267106 |
663 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 667 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374757755 rs1180128559 |
668 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs9696578 CA199415199 |
668 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5221431 rs763381957 |
669 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA374757767 rs766507787 |
669 | L>H | No |
ClinGen ExAC gnomAD |
|
|
rs766507787 CA5221432 |
669 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA5221434 rs755089827 |
671 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5221435 rs767748615 |
672 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA374757805 rs767748615 |
672 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA374757814 rs1465036469 |
673 | S>T | No |
ClinGen gnomAD |
|
|
rs1382934200 CA374757839 |
674 | N>K | No |
ClinGen gnomAD |
|
|
rs752859095 CA5221436 |
674 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs756053203 CA5221437 |
675 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374757848 rs1589244342 |
675 | K>R | No |
ClinGen Ensembl |
|
|
CA374757869 rs1364708265 |
677 | G>R | No |
ClinGen TOPMed |
|
|
rs371328761 CA5221439 |
678 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5221440 rs896776181 |
678 | R>H | No |
ClinGen TOPMed gnomAD |
|
| rs763056885 | 679 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5221442 rs757131212 |
680 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs908298803 CA199415326 |
681 | I>V | No |
ClinGen Ensembl |
|
| TCGA novel | 682 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749844499 CA5221468 COSM1743459 COSM1743458 |
682 | E>K | biliary_tract Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751212668 CA199415333 |
686 | G>R | No |
ClinGen Ensembl |
|
|
rs962198207 CA199415339 |
688 | L>I | No |
ClinGen Ensembl |
|
|
CA374758157 rs1357027431 |
692 | D>G | No |
ClinGen TOPMed |
|
|
CA199415343 rs754692493 |
694 | A>T | No |
ClinGen gnomAD |
|
|
rs1406476188 CA374758235 |
696 | D>G | No |
ClinGen gnomAD |
|
|
CA374758266 rs1303548812 |
697 | D>V | No |
ClinGen gnomAD |
|
|
CA5221473 rs752572521 |
698 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374758385 rs1341619905 |
702 | D>V | No |
ClinGen gnomAD |
|
|
rs1184411739 CA374758401 |
703 | T>A | No |
ClinGen TOPMed |
|
|
CA5221474 rs186351262 |
704 | W>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs753893776 CA5221476 |
705 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs377710586 CA5221475 |
705 | D>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA374758489 rs1482330536 |
706 | Q>E | No |
ClinGen TOPMed |
|
|
rs201752493 CA199415973 |
710 | W>C | No |
ClinGen TOPMed |
|
|
CA374759687 rs1446053943 |
714 | D>N | No |
ClinGen gnomAD |
|
|
rs945772493 CA199415976 |
716 | Q>* | No |
ClinGen Ensembl |
|
|
CA374759773 rs775835058 |
718 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1244129728 CA374759767 |
718 | E>K | No |
ClinGen TOPMed |
|
|
CA5221491 rs775835058 |
718 | E>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 720 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1385507807 CA374759858 |
723 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1160089195 CA374759855 |
723 | A>T | No |
ClinGen gnomAD |
|
|
rs1333582820 CA374759905 |
727 | A>T | No |
ClinGen gnomAD |
|
|
CA374760340 rs1419362134 |
728 | K>T | No |
ClinGen TOPMed |
|
|
rs767519230 CA5221525 |
729 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755630687 CA5221524 |
729 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1457643057 CA374760352 |
730 | Y>F | No |
ClinGen gnomAD |
|
|
CA5221526 rs753432646 |
730 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA199416440 rs545428148 |
732 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1367894068 CA374760369 |
733 | T>P | No |
ClinGen gnomAD |
|
|
CA374760371 rs1367894068 |
733 | T>S | No |
ClinGen gnomAD |
|
|
rs1383358460 CA374760379 |
734 | D>A | No |
ClinGen gnomAD |
|
|
rs1360526921 CA374760375 |
734 | D>N | No |
ClinGen gnomAD |
|
|
RCV000498026 rs1554828093 CA374760393 |
736 | A>G | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs375881478 CA199416454 |
737 | N>D | No |
ClinGen ESP TOPMed |
|
|
rs143285592 CA5221530 |
737 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5221531 rs528764941 |
738 | R>W | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA374760405 rs1273641948 |
739 | D>Y | No |
ClinGen gnomAD |
|
|
rs749370822 CA5221535 |
740 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs148360076 CA5221534 |
740 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5221536 rs546941257 |
741 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1486813242 CA374760418 |
742 | T>A | No |
ClinGen gnomAD |
|
|
rs759348434 CA5221538 |
742 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1334747086 CA374760428 |
744 | I>F | No |
ClinGen TOPMed |
|
|
CA374760438 rs1444199254 |
745 | T>N | No |
ClinGen gnomAD |
|
|
rs775380124 CA5221540 |
746 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1158855311 CA374760448 |
747 | V>A | No |
ClinGen gnomAD |
|
|
rs760207436 CA5221541 |
747 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA374760455 rs1589274666 |
748 | K>R | No |
ClinGen Ensembl |
|
|
CA374760472 rs1157552078 |
750 | G>V | No |
ClinGen TOPMed |
|
|
rs1453967949 CA374760477 |
751 | F>S | No |
ClinGen TOPMed |
|
|
rs1381805508 CA374760506 |
755 | S>F | No |
ClinGen TOPMed |
|
|
rs1343937772 CA374760503 |
755 | S>T | No |
ClinGen gnomAD |
|
|
rs139420096 CA374760515 |
757 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139420096 CA5221543 |
757 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761467289 CA5221545 |
764 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 764 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA199416527 rs572648532 |
765 | D>N | No |
ClinGen gnomAD |
|
|
CA374760589 rs1383080178 |
767 | Y>C | No |
ClinGen gnomAD |
|
|
rs938702801 CA374760597 |
768 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA199416533 rs938702801 |
768 | W>L | No |
ClinGen TOPMed gnomAD |
|
|
CA199416536 rs868375413 |
772 | P>H | No |
ClinGen Ensembl |
|
|
rs1304671346 CA374760624 |
772 | P>S | No |
ClinGen gnomAD |
|
|
rs1216456531 CA374760630 |
773 | L>S | No |
ClinGen gnomAD |
|
| TCGA novel | 775 | R>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1261361909 CA374760654 |
776 | A>V | No |
ClinGen gnomAD |
|
|
rs1460889014 CA374760657 |
777 | M>L | No |
ClinGen gnomAD |
|
|
CA374760659 rs1289902736 |
777 | M>T | No |
ClinGen TOPMed |
|
|
rs1460889014 CA374760656 |
777 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA374760677 rs1201886299 |
779 | E>D | No |
ClinGen gnomAD |
|
|
COSM4163293 COSM4163291 CA374760671 rs1589275636 |
779 | E>Q | thyroid [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1245123716 CA374760683 |
781 | A>T | No |
ClinGen gnomAD |
1 associated diseases with P06396
[MIM: 105120]: Amyloidosis 5 (AMYL5)
A hereditary generalized amyloidosis due to gelsolin amyloid deposition. It is typically characterized by cranial neuropathy and lattice corneal dystrophy. Most patients have modest involvement of internal organs, but severe systemic disease can develop in some individuals causing peripheral polyneuropathy, amyloid cardiomyopathy, and nephrotic syndrome leading to renal failure. {ECO:0000269|PubMed:1338910, ECO:0000269|PubMed:19666512, ECO:0000269|PubMed:2176481}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A hereditary generalized amyloidosis due to gelsolin amyloid deposition. It is typically characterized by cranial neuropathy and lattice corneal dystrophy. Most patients have modest involvement of internal organs, but severe systemic disease can develop in some individuals causing peripheral polyneuropathy, amyloid cardiomyopathy, and nephrotic syndrome leading to renal failure. {ECO:0000269|PubMed:1338910, ECO:0000269|PubMed:19666512, ECO:0000269|PubMed:2176481}. Note=The disease is caused by variants affecting the gene represented in this entry.
6 regional properties for P06396
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Gelsolin-like domain | 76 - 158 | IPR007123-1 |
| domain | Gelsolin-like domain | 198 - 270 | IPR007123-2 |
| domain | Gelsolin-like domain | 317 - 389 | IPR007123-3 |
| domain | Gelsolin-like domain | 455 - 536 | IPR007123-4 |
| domain | Gelsolin-like domain | 576 - 642 | IPR007123-5 |
| domain | Gelsolin-like domain | 681 - 756 | IPR007123-6 |
17 GO annotations of cellular component
| Name | Definition |
|---|---|
| actin cap | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae. |
| actin cytoskeleton | The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. |
| blood microparticle | A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids. |
| cortical actin cytoskeleton | The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
| ficolin-1-rich granule lumen | Any membrane-enclosed lumen that is part of a ficolin-1-rich granule. |
| focal adhesion | A cell-substrate junction that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments. In insects focal adhesion has also been referred to as hemi-adherens junction (HAJ). |
| lamellipodium | A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments. |
| phagocytic vesicle | A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| podosome | An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm. |
| sarcoplasm | The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum. |
| secretory granule lumen | The volume enclosed by the membrane of a secretory granule. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| actin binding | Binding to monomeric or multimeric forms of actin, including actin filaments. |
| actin filament binding | Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
| calcium ion binding | Binding to a calcium ion (Ca2+). |
| myosin II binding | Binding to a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin. |
| phosphatidylinositol 3-kinase catalytic subunit binding | Binding to the catalytic subunit of a phosphatidylinositol 3-kinase. The catalytic subunit catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring. |
| phosphatidylinositol-4,5-bisphosphate binding | Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions. |
32 GO annotations of biological process
| Name | Definition |
|---|---|
| actin filament capping | The binding of a protein or protein complex to the end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits. |
| actin filament depolymerization | Disassembly of actin filaments by the removal of actin monomers from a filament. |
| actin filament polymerization | Assembly of actin filaments by the addition of actin monomers to a filament. |
| actin filament reorganization | A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments. |
| actin filament severing | The process in which an actin filament is broken down into smaller filaments. |
| actin nucleation | The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament. |
| actin polymerization or depolymerization | Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament. |
| amyloid fibril formation | The generation of amyloid fibrils, insoluble fibrous protein aggregates exhibiting beta sheet structure, from proteins. |
| barbed-end actin filament capping | The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits. |
| cardiac muscle cell contraction | The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a cardiac muscle cell. |
| cell projection assembly | Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon. |
| cellular response to interferon-gamma | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far. |
| central nervous system development | The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. |
| cilium assembly | The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. |
| hepatocyte apoptotic process | Any apoptotic process in a hepatocyte, the main structural component of the liver. |
| negative regulation of viral entry into host cell | Any process that stops, prevents, or reduces the frequency, rate or extent of the entry of viral entry into a host cell. |
| phagocytosis, engulfment | The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis. |
| positive regulation of actin nucleation | Any process that activates or increases the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament. |
| positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway | Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway. |
| positive regulation of gene expression | Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). |
| positive regulation of keratinocyte apoptotic process | Any process that activates or increases the frequency, rate or extent of keratinocyte apoptotic process. |
| positive regulation of protein processing in phagocytic vesicle | Any process that activates or increases the frequency, rate or extent of protein processing in phagocytic vesicle. |
| protein destabilization | Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation. |
| regulation of establishment of T cell polarity | Any process that modulates the frequency, rate or extent of establishment of T cell polarity. |
| regulation of plasma membrane raft polarization | Any process that modulates the frequency, rate or extent of plasma membrane raft polarization. |
| regulation of podosome assembly | Any process that modulates the frequency, rate or extent of podosome assembly. |
| regulation of receptor clustering | Any process that modulates the frequency, rate or extent of receptor clustering. |
| relaxation of cardiac muscle | The process in which the extent of cardiac muscle contraction is reduced. |
| renal protein absorption | A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686). |
| response to muscle stretch | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length. |
| sequestering of actin monomers | The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers. |
| striated muscle atrophy | A process, occurring in striated muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse. |
6 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q3SX14 | GSN | Gelsolin | Bos taurus (Bovine) | PR |
| Q24020 | fliI | Protein flightless-1 | Drosophila melanogaster (Fruit fly) | PR |
| O75366 | AVIL | Advillin | Homo sapiens (Human) | PR |
| P13020 | Gsn | Gelsolin | Mus musculus (Mouse) | PR |
| Q68FP1 | Gsn | Gelsolin | Rattus norvegicus (Rat) | PR |
| O65570 | VLN4 | Villin-4 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAPHRPAPAL | LCALSLALCA | LSLPVRAATA | SRGASQAGAP | QGRVPEARPN | SMVVEHPEFL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KAGKEPGLQI | WRVEKFDLVP | VPTNLYGDFF | TGDAYVILKT | VQLRNGNLQY | DLHYWLGNEC |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SQDESGAAAI | FTVQLDDYLN | GRAVQHREVQ | GFESATFLGY | FKSGLKYKKG | GVASGFKHVV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PNEVVVQRLF | QVKGRRVVRA | TEVPVSWESF | NNGDCFILDL | GNNIHQWCGS | NSNRYERLKA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TQVSKGIRDN | ERSGRARVHV | SEEGTEPEAM | LQVLGPKPAL | PAGTEDTAKE | DAANRKLAKL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| YKVSNGAGTM | SVSLVADENP | FAQGALKSED | CFILDHGKDG | KIFVWKGKQA | NTEERKAALK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TASDFITKMD | YPKQTQVSVL | PEGGETPLFK | QFFKNWRDPD | QTDGLGLSYL | SSHIANVERV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| PFDAATLHTS | TAMAAQHGMD | DDGTGQKQIW | RIEGSNKVPV | DPATYGQFYG | GDSYIILYNY |
| 490 | 500 | 510 | 520 | 530 | 540 |
| RHGGRQGQII | YNWQGAQSTQ | DEVAASAILT | AQLDEELGGT | PVQSRVVQGK | EPAHLMSLFG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GKPMIIYKGG | TSREGGQTAP | ASTRLFQVRA | NSAGATRAVE | VLPKAGALNS | NDAFVLKTPS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| AAYLWVGTGA | SEAEKTGAQE | LLRVLRAQPV | QVAEGSEPDG | FWEALGGKAA | YRTSPRLKDK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| KMDAHPPRLF | ACSNKIGRFV | IEEVPGELMQ | EDLATDDVML | LDTWDQVFVW | VGKDSQEEEK |
| 730 | 740 | 750 | 760 | 770 | 780 |
| TEALTSAKRY | IETDPANRDR | RTPITVVKQG | FEPPSFVGWF | LGWDDDYWSV | DPLDRAMAEL |
| AA |