O94868
Gene name |
FCHSD2 (KIAA0769, SH3MD3) |
Protein name |
F-BAR and double SH3 domains protein 2 |
Names |
Carom, Protein nervous wreck 1, NWK1, SH3 multiple domains protein 3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9873 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for O94868
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2DL5 | NMR | - | A | 466-530 | PDB |
| 2DL7 | NMR | - | A | 569-628 | PDB |
| 6GBU | X-ray | 344 A | A/C/E/G | 567-629 | PDB |
| AF-O94868-F1 | Predicted | AlphaFoldDB |
489 variants for O94868
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs764999746 CA6176109 |
2 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381967859 rs1406057401 |
3 | P>L | No |
ClinGen TOPMed |
|
|
rs1012704475 CA224744834 |
4 | P>L | No |
ClinGen TOPMed |
|
|
CA381967844 rs1381193033 |
5 | P>L | No |
ClinGen gnomAD |
|
|
rs1245512923 CA381967567 |
9 | K>* | No |
ClinGen TOPMed |
|
|
rs1445835820 CA381967565 |
9 | K>T | No |
ClinGen TOPMed |
|
|
rs1591587779 CA381967559 |
10 | V>F | No |
ClinGen Ensembl |
|
|
rs753650296 CA224743506 |
11 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA224743503 rs925130690 |
13 | E>D | No |
ClinGen Ensembl |
|
|
rs1395747250 CA381967511 |
15 | K>E | No |
ClinGen gnomAD |
|
|
rs1565110053 CA381967499 |
16 | N>S | No |
ClinGen Ensembl |
|
|
rs774404890 CA224743496 |
21 | Q>R | No |
ClinGen Ensembl |
|
|
CA381967435 rs1170563386 |
22 | M>V | No |
ClinGen gnomAD |
|
|
rs1391489459 CA381967423 |
23 | T>A | No |
ClinGen gnomAD |
|
|
CA381967361 rs1477152190 |
28 | K>R | No |
ClinGen gnomAD |
|
|
rs1426451027 CA381967327 |
31 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6176097 rs774420498 |
33 | C>Y | No |
ClinGen ExAC TOPMed |
|
|
rs1428609468 CA381967295 |
34 | D>A | No |
ClinGen gnomAD |
|
|
COSM219206 rs768861504 CA6176096 |
36 | L>F | breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA381967272 rs1443952210 |
36 | L>P | No |
ClinGen TOPMed |
|
|
CA381967251 rs1591587699 |
38 | D>V | No |
ClinGen Ensembl |
|
|
CA381967239 rs1189171072 |
39 | M>L | No |
ClinGen gnomAD |
|
|
CA224743490 rs191350191 |
39 | M>T | No |
ClinGen 1000Genomes |
|
| TCGA novel | 41 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA224706635 rs867193410 |
46 | K>R | No |
ClinGen Ensembl |
|
|
rs1456278990 CA381967001 |
49 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1344461939 CA381966946 |
53 | Y>C | No |
ClinGen gnomAD |
|
|
CA381966951 rs1157549175 |
53 | Y>H | No |
ClinGen TOPMed |
|
|
rs763185978 CA6176073 |
56 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6176071 rs770680422 |
62 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA6176070 rs746866405 |
63 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1280562098 CA381966887 |
65 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1202261592 CA381966867 |
68 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA6176067 rs748068558 |
68 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs778441137 CA6176066 |
72 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs374746074 CA6176065 |
75 | D>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA6176063 rs569167163 |
77 | R>Q | Variant assessed as Somatic; 4.636e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs536621200 CA6176064 |
77 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs756530486 CA6176062 |
79 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs971977909 CA224681879 |
80 | Y>N | No |
ClinGen Ensembl |
|
| TCGA novel | 82 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 83 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1341367344 CA381966753 |
83 | M>V | No |
ClinGen TOPMed |
|
|
rs1411715659 CA381966739 |
84 | Y>* | No |
ClinGen gnomAD |
|
|
CA6176050 rs771880379 |
85 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6176051 rs771880379 |
85 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774197870 CA6176048 |
86 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774197870 CA381966732 |
86 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 87 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 87 | W>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6176047 rs768211303 |
89 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA6176045 rs779720891 |
92 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA6176044 rs755756437 |
95 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs868773192 CA224656872 |
96 | Q>* | No |
ClinGen Ensembl |
|
|
CA381966641 rs1431239847 |
99 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1591472620 CA381966630 |
101 | R>Q | No |
ClinGen Ensembl |
|
|
CA6176042 rs781648537 |
101 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs867922056 CA224656862 |
103 | N>S | No |
ClinGen gnomAD |
|
|
CA6176041 rs757611645 |
104 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA381966605 rs1591472608 |
105 | C>R | No |
ClinGen Ensembl |
|
|
CA6176038 rs758959599 |
110 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA6176037 rs368880489 |
110 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6176036 rs368880489 |
110 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 110 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759707087 CA6176035 |
111 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA224656807 rs752348294 |
113 | S>T | No |
ClinGen Ensembl |
|
|
rs1444341067 CA381966528 |
116 | A>S | No |
ClinGen gnomAD |
|
|
CA381966517 rs1355071534 |
117 | R>S | No |
ClinGen gnomAD |
|
|
CA381966509 rs1333533975 |
119 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 120 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776890422 CA6176034 |
121 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs879217231 CA224656761 |
122 | L>* | No |
ClinGen Ensembl |
|
|
CA381966488 rs1441542217 |
122 | L>V | No |
ClinGen TOPMed |
|
|
CA224656735 rs563132107 |
127 | L>Q | No |
ClinGen 1000Genomes gnomAD |
|
|
rs761582611 CA6176032 |
128 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA381966437 rs1179433546 |
129 | R>K | No |
ClinGen gnomAD |
|
|
CA6176030 rs768416463 |
129 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs773948336 CA6176014 |
130 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1357415883 CA381966387 |
134 | L>F | No |
ClinGen gnomAD |
|
|
CA6176013 rs763975906 |
136 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA381966373 rs1399505255 |
136 | K>N | No |
ClinGen gnomAD |
|
|
rs775616333 CA6176011 |
140 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA381966335 rs1463436033 |
142 | Q>* | No |
ClinGen gnomAD |
|
|
CA224647358 rs964678928 |
143 | E>G | No |
ClinGen Ensembl |
|
|
rs371294708 CA224647357 |
146 | K>R | No |
ClinGen ESP TOPMed |
|
|
COSM931779 CA381966301 rs1187975439 |
147 | D>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1427414707 CA381966295 |
148 | L>I | No |
ClinGen gnomAD |
|
|
rs1259227950 CA381966292 |
148 | L>S | No |
ClinGen gnomAD |
|
|
CA224647356 rs1011265026 |
149 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs145068964 CA224647351 |
150 | K>E | No |
ClinGen ESP gnomAD |
|
|
CA6176009 rs184438309 |
151 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1211625843 CA381966274 |
151 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA381966272 rs1211625843 |
151 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1591461860 CA381966267 |
152 | K>R | No |
ClinGen Ensembl |
|
|
CA381966254 rs1273756488 |
154 | K>E | No |
ClinGen gnomAD |
|
|
rs1305893399 CA381966238 |
156 | F>L | No |
ClinGen gnomAD |
|
|
rs1297964215 CA381966232 |
156 | F>L | No |
ClinGen gnomAD |
|
|
rs770425427 CA6176007 |
160 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA224647328 rs111288078 |
161 | M>V | No |
ClinGen Ensembl |
|
|
rs1367205405 CA381966192 |
162 | A>S | No |
ClinGen gnomAD |
|
|
rs141289190 CA224647313 |
162 | A>V | No |
ClinGen ESP |
|
|
CA6176005 rs777951527 |
163 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381966166 rs1395770621 |
164 | A>E | No |
ClinGen gnomAD |
|
|
rs1461032422 CA381966146 |
166 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA381966144 rs1370891890 |
166 | R>Q | No |
ClinGen gnomAD |
|
|
CA381966114 rs1172050567 |
168 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 170 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1376378652 CA381966062 |
171 | I>M | No |
ClinGen TOPMed |
|
|
CA6176003 rs748626464 |
171 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1455400225 CA381965800 |
175 | S>P | No |
ClinGen gnomAD |
|
|
rs1395497646 CA381965777 |
178 | S>T | No |
ClinGen gnomAD |
|
|
rs1010615317 CA224644052 |
181 | Q>R | No |
ClinGen Ensembl |
|
|
rs750676450 CA6175994 |
183 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381965734 rs1378496269 |
184 | I>M | No |
ClinGen TOPMed |
|
|
rs1201240011 CA381965739 |
184 | I>V | No |
ClinGen TOPMed |
|
|
rs1435954776 CA381965728 |
185 | S>I | No |
ClinGen gnomAD |
|
|
CA381965695 rs1196385581 |
190 | S>G | No |
ClinGen gnomAD |
|
|
rs148410888 CA6175993 |
191 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381965679 rs1477568165 |
192 | K>R | No |
ClinGen TOPMed |
|
|
CA381965640 rs1386918196 |
196 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381965641 rs1398736297 |
196 | R>W | No |
ClinGen gnomAD |
|
|
CA224643275 rs921663371 |
197 | R>Q | No |
ClinGen gnomAD |
|
|
rs933691043 CA224643262 |
198 | S>F | No |
ClinGen TOPMed |
|
|
rs776251987 CA224643232 |
202 | S>F | No |
ClinGen Ensembl |
|
|
rs1432017650 CA381965576 |
206 | H>R | No |
ClinGen TOPMed |
|
|
rs146618245 CA6175973 |
206 | H>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
CA224643194 rs963539344 |
207 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs753862703 CA6175971 |
213 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA6175970 rs377537934 |
216 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377537934 CA6175969 |
216 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175967 rs767103870 |
218 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs774655376 CA6175965 |
222 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA224643115 rs983372592 |
224 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs769026499 CA6175964 |
224 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA381965454 rs1229718360 |
225 | Y>C | No |
ClinGen gnomAD |
|
|
CA381965457 rs1289461926 |
225 | Y>H | No |
ClinGen gnomAD |
|
|
rs201284616 CA224643108 |
226 | Y>C | No |
ClinGen 1000Genomes |
|
|
CA381965404 rs1428273887 |
232 | N>S | No |
ClinGen gnomAD |
|
|
rs749733650 CA6175963 |
234 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs373410364 CA6175962 |
235 | K>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA381966154 rs1433041677 |
238 | D>N | No |
ClinGen gnomAD |
|
|
rs185931366 CA381966133 |
239 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA gnomAD |
|
rs1377534175 CA381966141 |
239 | G>R | No |
ClinGen gnomAD |
|
|
rs185931366 CA224603112 |
239 | G>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA381966121 rs1400503361 |
240 | N>S | No |
ClinGen gnomAD |
|
|
rs1406405272 CA381966113 |
241 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs775846547 CA6175940 |
242 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA381966083 rs1473267759 |
243 | D>G | No |
ClinGen gnomAD |
|
|
CA381966071 rs1186628639 |
244 | H>P | No |
ClinGen gnomAD |
|
|
CA381966073 rs1251964830 |
244 | H>Y | No |
ClinGen gnomAD |
|
|
rs746365924 CA6175938 |
251 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA224603094 rs770278647 |
251 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770278647 CA6175939 |
251 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM281123 rs776804802 CA6175937 |
254 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1225444368 CA381965971 |
254 | R>W | No |
ClinGen gnomAD |
|
|
rs771184875 CA6175936 |
259 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs778208705 CA6175934 |
260 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs369295273 CA6175933 |
260 | C>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749056876 CA6175932 |
262 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1343840182 CA381965915 |
263 | V>L | No |
ClinGen gnomAD |
|
|
rs1464689774 CA381965884 |
267 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs756041954 CA6175930 |
267 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1565324042 CA381965875 |
268 | Q>H | No |
ClinGen Ensembl |
|
|
rs1161370969 CA381965878 |
268 | Q>R | No |
ClinGen TOPMed |
|
|
CA6175929 rs750378599 |
269 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA6175928 rs143760818 |
271 | L>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761438486 CA224603018 |
276 | K>T | No |
ClinGen Ensembl |
|
|
rs148968336 CA6175909 |
279 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs745771397 CA6175910 |
279 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs777152337 CA6175906 |
280 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751010690 CA6175907 |
280 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA6175905 rs758027410 |
281 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6175903 rs765605002 |
282 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA6175904 rs765605002 |
282 | N>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 283 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760045838 CA6175902 |
284 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA224585637 rs1010470181 |
286 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA224585635 rs1031605261 |
287 | L>F | No |
ClinGen Ensembl |
|
|
CA6175899 rs766938793 COSM931773 |
291 | A>T | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs761270727 CA6175898 |
291 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1170161141 CA381965012 |
292 | V>A | No |
ClinGen gnomAD |
|
|
CA224585600 rs149843295 |
294 | H>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA6175897 rs773389977 |
296 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA381964982 rs1267973954 |
297 | Q>K | No |
ClinGen gnomAD |
|
|
CA381964979 rs1195293655 |
297 | Q>R | No |
ClinGen gnomAD |
|
|
CA381964961 rs201315056 |
299 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381964954 CA6175893 rs139052840 |
300 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381964943 rs1301655406 |
302 | Q>* | No |
ClinGen gnomAD |
|
|
rs76555174 CA381964939 |
302 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381964945 rs1301655406 |
302 | Q>K | No |
ClinGen gnomAD |
|
|
rs745718172 CA6175892 |
302 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1306986639 CA381964938 |
303 | P>A | No |
ClinGen gnomAD |
|
|
COSM1356857 CA381964933 rs1390308788 |
303 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
| TCGA novel | 303 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381964929 rs1370588845 |
304 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs144344315 CA6175890 |
306 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1374505092 CA381964906 |
307 | D>G | No |
ClinGen gnomAD |
|
|
CA381964909 rs1429936223 |
307 | D>N | No |
ClinGen gnomAD |
|
|
CA381964900 rs1171446122 |
308 | T>A | No |
ClinGen gnomAD |
|
|
CA6175865 rs754641064 |
309 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367639909 CA6175864 |
310 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs578179442 CA6175863 |
314 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1477091005 CA381964439 |
320 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA381964429 rs1406036098 |
321 | E>K | No |
ClinGen gnomAD |
|
|
rs1429337757 CA381964416 |
322 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381964415 rs1396021964 |
323 | S>G | No |
ClinGen gnomAD |
|
|
CA381964398 rs1451696338 |
325 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA224576404 rs1020198544 |
329 | R>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 330 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6175859 rs776167806 COSM400463 |
334 | R>C | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1008373651 CA224576402 |
334 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 334 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381964321 rs1451745664 |
337 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6175858 rs757793948 |
337 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381964319 rs757793948 |
337 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs1202645619 CA381964314 |
338 | E>G | No |
ClinGen gnomAD |
|
|
rs61753292 CA381964267 |
344 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175857 rs140393712 |
344 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381964249 rs1283419020 |
347 | R>Q | No |
ClinGen TOPMed |
|
|
CA6175855 rs763111268 |
347 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381964111 rs779970508 |
348 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
CA224574951 rs779970508 |
348 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA224574938 rs368407877 |
350 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175838 rs368407877 |
350 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1313610827 CA381964086 |
352 | L>Q | No |
ClinGen TOPMed |
|
|
rs752903498 CA224574905 |
354 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs142618697 CA6175836 |
354 | C>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224574914 rs142618697 |
354 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175835 rs752903498 |
354 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381964071 rs1565306579 |
355 | H>D | No |
ClinGen Ensembl |
|
|
CA381964068 rs1203584500 |
355 | H>R | No |
ClinGen TOPMed |
|
|
CA6175834 rs148444805 |
357 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1473318125 CA381964055 |
357 | A>V | No |
ClinGen gnomAD |
|
|
rs1252080202 CA381964047 |
358 | A>V | No |
ClinGen gnomAD |
|
|
CA381964022 rs1482085364 |
362 | Q>R | No |
ClinGen gnomAD |
|
|
CA381964009 rs1238950831 |
364 | R>* | No |
ClinGen gnomAD |
|
|
rs999723456 CA224574891 |
364 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1266225768 CA381963997 |
366 | E>G | No |
ClinGen gnomAD |
|
|
CA6175832 rs750147178 COSM3703679 |
366 | E>K | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs568144352 CA6175828 |
371 | I>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 376 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 376 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1303719342 CA381963908 |
378 | I>T | No |
ClinGen gnomAD |
|
|
CA6175827 rs762606612 |
379 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775149903 CA6175826 |
379 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6175824 rs745563864 |
382 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs144631789 CA6175810 |
383 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 385 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA224459852 rs767989113 |
390 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA6175808 rs775098553 |
391 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1207667561 CA381787371 |
391 | R>W | No |
ClinGen gnomAD |
|
|
CA381787352 rs1163398532 |
393 | D>N | No |
ClinGen TOPMed |
|
|
rs759087153 CA6175806 |
396 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs372956797 CA6175805 |
397 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771186144 CA6175804 |
398 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175803 rs747317511 |
400 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs773571494 CA6175802 |
402 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA381787232 rs1489542783 |
403 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA381787240 rs1189534694 |
403 | D>G | No |
ClinGen gnomAD |
|
|
rs1266225015 CA381787230 |
404 | T>P | No |
ClinGen gnomAD |
|
|
rs1340329610 CA381787213 |
405 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
rs772529496 CA6175801 |
408 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1299907243 CA381787135 |
410 | M>T | No |
ClinGen gnomAD |
|
|
rs745363284 CA6175800 |
410 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175798 rs755129334 |
414 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA6175797 rs749471907 |
415 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs146056703 CA6175795 |
417 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs751329980 CA6175794 |
418 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA381786980 rs1482710902 |
419 | N>K | No |
ClinGen TOPMed |
|
|
rs764009065 CA6175793 |
420 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs142899648 CA6175792 |
421 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6175790 rs764621173 |
424 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA6175789 rs759152034 |
424 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA381786911 rs759152034 |
424 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs138320954 CA224459796 |
425 | P>L | No |
ClinGen ESP gnomAD |
|
|
CA381786879 rs1483347992 |
427 | A>S | No |
ClinGen TOPMed |
|
|
rs147085844 CA224459791 |
429 | T>N | No |
ClinGen 1000Genomes |
|
|
CA6175787 rs765990301 |
430 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1450791981 CA381786811 |
432 | G>A | No |
ClinGen TOPMed |
|
| TCGA novel | 433 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6175786 rs150417770 |
434 | L>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA6175785 rs773518304 |
435 | H>D | No |
ClinGen ExAC gnomAD |
|
|
CA381786780 rs773518304 |
435 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs140557765 CA6175783 |
436 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA381786767 rs1294491034 |
436 | S>P | No |
ClinGen gnomAD |
|
|
rs140557765 CA6175784 |
436 | S>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6175759 rs781628927 |
439 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175756 rs778603874 |
442 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754893363 CA6175755 |
443 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA6175753 COSM931771 rs779505143 |
445 | E>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6175754 rs753766433 |
445 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381784550 rs1447409185 |
447 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 448 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1192006860 CA381784470 |
450 | E>D | No |
ClinGen TOPMed |
|
|
CA381784456 rs755685122 |
451 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175751 rs755685122 |
451 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175750 rs750060498 |
453 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224451991 rs368659761 |
453 | M>T | No |
ClinGen gnomAD |
|
|
rs767103922 CA6175749 |
456 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA381784336 rs576568698 |
457 | D>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6175748 rs576568698 |
457 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs1246677075 CA381784321 |
458 | D>Y | No |
ClinGen gnomAD |
|
|
CA381784303 rs1430562407 |
459 | S>R | No |
ClinGen TOPMed |
|
|
rs1383320156 CA381784294 |
459 | S>T | No |
ClinGen gnomAD |
|
|
COSM1193326 rs201865960 CA6175747 |
463 | P>R | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1465954944 CA381784247 |
463 | P>T | No |
ClinGen TOPMed |
|
|
rs948619493 CA224451986 |
464 | S>F | No |
ClinGen Ensembl |
|
|
rs1432763862 CA381784227 |
465 | G>D | No |
ClinGen gnomAD |
|
| TCGA novel | 468 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1367276143 CA381784177 |
470 | Y>D | No |
ClinGen gnomAD |
|
|
rs1591339055 CA381784142 |
473 | T>I | No |
ClinGen Ensembl |
|
|
CA6175745 rs763496451 |
477 | V>D | No |
ClinGen ExAC gnomAD |
|
|
rs1297753580 CA381784108 |
477 | V>F | No |
ClinGen TOPMed |
|
|
CA6175744 rs775903756 |
478 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA381784102 rs1338733704 |
478 | Y>N | No |
ClinGen TOPMed |
|
|
rs769990320 CA6175743 |
480 | Y>C | No |
ClinGen ExAC |
|
|
CA381784069 rs1165257049 |
481 | K>E | No |
ClinGen gnomAD |
|
|
rs1250694445 CA381783835 |
482 | A>P | No |
ClinGen gnomAD |
|
|
rs1250694445 CA381783836 |
482 | A>T | No |
ClinGen gnomAD |
|
|
CA6175727 rs763295534 |
484 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs143408886 CA6175724 |
488 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381783747 rs1224216560 |
490 | I>T | No |
ClinGen gnomAD |
|
|
CA381783754 rs1418643963 |
490 | I>V | No |
ClinGen TOPMed |
|
|
rs1350099454 CA381783732 |
491 | E>D | No |
ClinGen gnomAD |
|
|
rs760918779 CA6175721 |
492 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs766613200 CA6175722 |
492 | E>K | No |
ClinGen ExAC |
|
|
CA381783711 rs1408152166 |
493 | H>Q | No |
ClinGen TOPMed |
|
|
rs1565283207 CA381783713 |
493 | H>R | No |
ClinGen Ensembl |
|
|
rs1335864063 CA381783706 |
494 | E>Q | No |
ClinGen TOPMed |
|
|
CA381783675 rs1412040828 |
497 | E>K | No |
ClinGen gnomAD |
|
|
rs1333963278 CA381783590 |
504 | M>T | No |
ClinGen gnomAD |
|
|
rs374946704 CA6175704 |
511 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763139458 CA224450889 |
513 | K>Q | No |
ClinGen Ensembl |
|
|
rs754434724 CA6175703 |
513 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381783429 rs1408282822 |
516 | Q>R | No |
ClinGen gnomAD |
|
|
CA381783411 rs1181054734 |
518 | G>D | No |
ClinGen gnomAD |
|
|
CA6175702 rs766473899 |
526 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175701 rs760721519 |
527 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA6175697 rs750274468 |
530 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1226930320 CA381783247 |
534 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6175694 rs369975719 |
537 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224450875 rs918639119 |
540 | L>P | No |
ClinGen Ensembl |
|
|
rs1434955529 CA381783206 |
541 | A>P | No |
ClinGen gnomAD |
|
|
rs1317887135 CA381783199 |
542 | A>T | No |
ClinGen gnomAD |
|
|
rs200902127 CA224450872 |
545 | S>N | No |
ClinGen gnomAD |
|
|
rs770462860 CA6175692 |
545 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs777341564 CA6175690 |
546 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746447753 CA6175691 |
546 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175689 rs528290577 |
549 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6175686 rs755459693 |
550 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs958273250 CA224450866 |
553 | S>C | No |
ClinGen Ensembl |
|
|
rs200023715 CA224450864 |
554 | T>M | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs756645906 CA6175683 |
556 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA6175684 rs756645906 |
556 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA6175682 rs549243569 |
558 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA224450858 rs549243569 |
558 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6175679 rs530741137 |
559 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6175680 rs762002880 |
559 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs563621415 CA6175678 |
562 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1383394081 CA381783065 |
564 | N>S | No |
ClinGen gnomAD |
|
|
CA381783060 rs1292466689 |
565 | G>R | No |
ClinGen gnomAD |
|
|
rs770707766 CA6175675 |
566 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1247171291 CA381783046 |
567 | A>T | No |
ClinGen TOPMed |
|
|
CA381783035 rs1163971431 |
568 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA381783032 rs772574751 |
568 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA6175655 rs760497980 |
570 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs771693765 CA6175654 |
572 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771693765 CA6175653 |
572 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381782922 rs1462954187 |
579 | E>K | No |
ClinGen TOPMed |
|
|
CA6175651 rs774000414 |
579 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs768378654 CA6175650 |
584 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381782849 rs1565282339 |
589 | P>L | No |
ClinGen Ensembl |
|
|
CA381782826 rs1565282328 |
593 | I>V | No |
ClinGen Ensembl |
|
|
rs895684977 CA224450795 |
594 | I>V | No |
ClinGen TOPMed |
|
|
rs770238136 CA6175647 |
595 | R>C | No |
ClinGen ExAC |
|
|
CA6175646 rs748017056 |
595 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381782812 rs748017056 |
595 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175645 rs781752775 |
596 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs949487223 CA224450791 |
599 | K>E | No |
ClinGen Ensembl |
|
| TCGA novel | 600 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs990779969 CA224450788 |
603 | D>V | No |
ClinGen Ensembl |
|
|
CA6175643 rs751572265 |
610 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381782690 rs758595614 |
612 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758595614 CA6175641 |
612 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766081890 CA6175640 |
613 | N>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381782680 rs1365825253 |
613 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs766081890 CA6175639 |
613 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755994711 CA6175638 |
615 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs147782509 CA6175636 |
615 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs147782509 CA6175637 |
615 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1254664191 CA381782666 |
616 | I>T | No |
ClinGen gnomAD |
|
|
CA381782633 rs773945981 |
621 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA6175634 rs773945981 |
621 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA381782635 rs1462176552 |
621 | S>P | No |
ClinGen gnomAD |
|
|
CA381782616 rs1207569365 |
624 | V>A | No |
ClinGen gnomAD |
|
|
rs1348080286 CA381782614 |
625 | E>K | No |
ClinGen gnomAD |
|
|
CA6175632 rs762486252 |
628 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175630 rs373737720 |
638 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1312689686 CA381782516 |
639 | R>G | No |
ClinGen gnomAD |
|
|
CA224450776 rs570031472 |
640 | E>Q | No |
ClinGen Ensembl |
|
|
CA6175629 rs746187247 |
641 | I>N | No |
ClinGen ExAC TOPMed |
|
|
rs1165845178 CA381782355 |
645 | P>L | No |
ClinGen gnomAD |
|
|
CA381782338 rs772469113 |
647 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs772469113 CA6175607 |
647 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs778888175 CA6175605 |
648 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA6175604 rs755174406 |
650 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224450600 rs879129590 |
650 | H>P | No |
ClinGen Ensembl |
|
|
rs757189973 CA6175602 |
651 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175601 rs757189973 |
651 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224450598 rs76079323 |
652 | S>P | No |
ClinGen Ensembl |
|
|
rs777798669 CA6175599 |
653 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA6175598 rs141914231 |
654 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381782274 rs1224404011 |
654 | P>S | No |
ClinGen gnomAD |
|
|
CA224450594 rs909235479 |
655 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs144952535 CA381782259 |
656 | L>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
RCV000969610 rs114942058 CA6175597 |
657 | P>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA6175595 rs759205526 |
659 | Y>C | No |
ClinGen ExAC TOPMed |
|
|
CA381782231 rs759205526 |
659 | Y>S | No |
ClinGen ExAC TOPMed |
|
|
rs1591329541 CA381782218 |
660 | D>A | No |
ClinGen Ensembl |
|
| TCGA novel | 660 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1270390793 CA381782206 |
661 | Q>R | No |
ClinGen TOPMed |
|
|
rs1305228636 CA381782187 |
663 | P>S | No |
ClinGen gnomAD |
|
|
rs1045315 CA224450588 |
665 | S>T | No |
ClinGen Ensembl |
|
|
rs748678642 CA224450587 |
666 | P>S | No |
ClinGen gnomAD |
|
|
CA6175593 rs766715895 |
667 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373494327 CA6175594 |
667 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772588181 CA6175590 |
668 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs773569322 CA6175591 |
668 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426747958 CA381782126 |
669 | S>G | No |
ClinGen gnomAD |
|
|
CA6175587 CA381782097 rs369315223 |
671 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224450580 rs928395165 |
671 | D>G | No |
ClinGen TOPMed |
|
|
CA6175588 rs150767189 |
671 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175585 rs780485692 |
673 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA381782067 rs1462778550 |
674 | S>I | No |
ClinGen TOPMed |
|
|
rs1167719243 CA381782047 |
676 | L>P | No |
ClinGen TOPMed |
|
|
rs1199908300 CA381782021 |
678 | F>L | No |
ClinGen gnomAD |
|
|
CA224450573 rs1032843545 |
678 | F>L | No |
ClinGen Ensembl |
|
|
rs555444484 CA381782002 |
680 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs555444484 CA6175582 |
680 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6175583 rs746736841 |
680 | R>W | Variant assessed as Somatic; 4.684e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA224450569 rs766720051 |
681 | S>P | No |
ClinGen TOPMed |
|
|
CA381781980 rs1278133133 |
683 | S>A | No |
ClinGen gnomAD |
|
|
rs199623106 CA6175579 |
683 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1278133133 CA381781983 |
683 | S>T | No |
ClinGen gnomAD |
|
|
CA6175577 rs753359718 |
685 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs903906046 CA224450564 |
685 | N>S | No |
ClinGen Ensembl |
|
|
rs1218167332 CA381781901 |
686 | E>G | No |
ClinGen gnomAD |
|
|
rs760347351 CA6175575 |
686 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA381781878 rs1455802756 |
688 | S>T | No |
ClinGen gnomAD |
|
|
CA6175547 rs759802802 |
689 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs776775518 CA6175546 |
690 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381781850 rs1201339654 |
691 | A>S | No |
ClinGen TOPMed |
|
| TCGA novel | 691 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381781819 rs1477493896 |
694 | P>A | No |
ClinGen TOPMed |
|
|
rs1170293565 CA381781804 |
695 | G>V | No |
ClinGen TOPMed |
|
|
rs774231672 CA6175543 |
697 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768527873 CA6175542 |
698 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1360601398 COSM1356848 CA381781749 |
701 | R>G | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA6175539 rs201682261 |
702 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6175540 rs779505229 |
702 | H>Y | No |
ClinGen ExAC |
|
|
rs780653733 CA6175537 |
705 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA6175538 rs745524855 |
705 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1422559933 CA381781677 |
707 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA6175535 rs751834736 |
708 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs202178689 CA224450422 |
709 | G>D | No |
ClinGen 1000Genomes |
|
|
rs146015778 CA6175534 |
710 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753298581 CA6175532 |
711 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA6175531 rs765405062 |
712 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1268529129 CA381781630 |
712 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1273781772 CA381781147 |
715 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1210493218 CA381781148 |
715 | R>W | No |
ClinGen TOPMed |
|
|
rs760772829 CA6175509 |
719 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224449894 rs779305377 |
719 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224449892 rs779305377 |
719 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779305377 CA6175508 |
719 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760772829 CA381781126 |
719 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381781111 rs1262001030 |
722 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA381781104 rs1221237766 |
723 | Q>* | No |
ClinGen gnomAD |
|
|
rs769335561 CA6175506 |
724 | N>* | No |
ClinGen ExAC |
|
|
rs200337344 CA6175507 |
724 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381781082 rs1591325329 |
726 | R>* | No |
ClinGen Ensembl |
|
|
CA224449884 rs757495469 |
726 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA381781073 rs1369836611 |
727 | R>S | No |
ClinGen TOPMed |
|
|
CA381781038 rs1299861945 |
732 | I>M | No |
ClinGen gnomAD |
|
|
CA6175503 rs181961231 |
732 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 735 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1405386501 CA381781016 |
735 | V>G | No |
ClinGen gnomAD |
|
|
rs551040655 CA6175500 |
738 | T>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381780977 rs1430315662 |
741 | V>C | No |
ClinGen gnomAD |
No associated diseases with O94868
7 regional properties for O94868
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | FCH domain | 12 - 108 | IPR001060 |
| domain | SH3 domain | 469 - 530 | IPR001452-1 |
| domain | SH3 domain | 567 - 629 | IPR001452-2 |
| domain | F-BAR domain | 8 - 282 | IPR031160 |
| domain | F-BAR and double SH3 domains protein 2, F-BAR domain | 16 - 275 | IPR034934 |
| domain | FCHSD, SH3 domain 1 | 471 - 527 | IPR035460 |
| domain | FCHSD2, SH3 domain 2 | 571 - 626 | IPR035556 |
Functions
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| anchoring junction | A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. |
| clathrin-coated pit | A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes. |
| neuromuscular junction | The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| recycling endosome | An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane. |
| stereocilium shaft | The shaft comprises the majority of the length of the stereocilium. This region is notable for the extreme stability of actin filaments, which are highly crosslinked into a parallel bundle. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| phosphatidylinositol-3,4,5-trisphosphate binding | Binding to phosphatidylinositol-3,4,5-trisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3', 4' and 5' positions. |
| phosphatidylinositol-3,4-bisphosphate binding | Binding to phosphatidylinositol-3,4-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' and 4' positions. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| clathrin-dependent endocytosis | An endocytosis process that begins when material is taken up into clathrin-coated pits, which then pinch off to form clathrin-coated endocytic vesicles. |
| membrane organization | A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. |
| neuromuscular synaptic transmission | The process of synaptic transmission from a neuron to a muscle, across a synapse. |
| positive regulation of actin filament polymerization | Any process that activates or increases the frequency, rate or extent of actin polymerization. |
| positive regulation of Arp2/3 complex-mediated actin nucleation | Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation. |
| protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| regulation of actin filament polymerization | Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament. |
15 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q7Z6B7 | SRGAP1 | SLIT-ROBO Rho GTPase-activating protein 1 | Homo sapiens (Human) | PR |
| O75044 | SRGAP2 | SLIT-ROBO Rho GTPase-activating protein 2 | Homo sapiens (Human) | PR |
| Q96RU3 | FNBP1 | Formin-binding protein 1 | Homo sapiens (Human) | PR |
| Q5T0N5 | FNBP1L | Formin-binding protein 1-like | Homo sapiens (Human) | PR |
| Q8CJ53 | Trip10 | Cdc42-interacting protein 4 | Mus musculus (Mouse) | PR |
| Q91Z69 | Srgap1 | SLIT-ROBO Rho GTPase-activating protein 1 | Mus musculus (Mouse) | PR |
| Q812A2 | Srgap3 | SLIT-ROBO Rho GTPase-activating protein 3 | Mus musculus (Mouse) | PR |
| Q91Z67 | Srgap2 | SLIT-ROBO Rho GTPase-activating protein 2 | Mus musculus (Mouse) | PR |
| Q80TY0 | Fnbp1 | Formin-binding protein 1 | Mus musculus (Mouse) | PR |
| Q8K012 | Fnbp1l | Formin-binding protein 1-like | Mus musculus (Mouse) | PR |
| Q6PFY1 | Fchsd1 | F-BAR and double SH3 domains protein 1 | Mus musculus (Mouse) | PR |
| Q3USJ8 | Fchsd2 | F-BAR and double SH3 domains protein 2 | Mus musculus (Mouse) | PR |
| D4A208 | Srgap2 | SLIT-ROBO Rho GTPase-activating protein 2 | Rattus norvegicus (Rat) | PR |
| Q8R511 | Fnbp1 | Formin-binding protein 1 | Rattus norvegicus (Rat) | PR |
| Q2HWF0 | Fnbp1l | Formin-binding protein 1-like | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MQPPPRKVKV | TQELKNIQVE | QMTKLQAKHQ | AECDLLEDMR | TFSQKKAAIE | REYAQGMQKL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ASQYLKRDWP | GVKADDRNDY | RSMYPVWKSF | LEGTMQVAQS | RMNICENYKN | FISEPARTVR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SLKEQQLKRC | VDQLTKIQTE | LQETVKDLAK | GKKKYFETEQ | MAHAVREKAD | IEAKSKLSLF |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QSRISLQKAS | VKLKARRSEC | NSKATHARND | YLLTLAAANA | HQDRYYQTDL | VNIMKALDGN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VYDHLKDYLI | AFSRTELETC | QAVQNTFQFL | LENSSKVVRD | YNLQLFLQEN | AVFHKPQPFQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FQPCDSDTSR | QLESETGTTE | EHSLNKEARK | WATRVAREHK | NIVHQQRVLN | DLECHGAAVS |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EQSRAELEQK | IDEARENIRK | AEIIKLKAEA | RLDLLKQIGV | SVDTWLKSAM | NQVMEELENE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| RWARPPAVTS | NGTLHSLNAD | TEREEGEEFE | DNMDVFDDSS | SSPSGTLRNY | PLTCKVVYSY |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KASQPDELTI | EEHEVLEVIE | DGDMEDWVKA | RNKVGQVGYV | PEKYLQFPTS | NSLLSMLQSL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| AALDSRSHTS | SNSTEAELVS | GSLNGDASVC | FVKALYDYEG | QTDDELSFPE | GAIIRILNKE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| NQDDDGFWEG | EFNGRIGVFP | SVLVEELSAS | ENGDTPWMRE | IQISPSPKPH | ASLPPLPLYD |
| 670 | 680 | 690 | 700 | 710 | 720 |
| QPPSSPYPSP | DKRSSLYFPR | SPSANEKSLH | AESPGFSQAS | RHTPETSYGK | LRPVRAAPPP |
| 730 | |||||
| PTQNHRRPAE | KIEDVEITLV |