Q96RF0
Gene name |
SNX18 |
Protein name |
Sorting nexin-18 |
Names |
SH3 and PX domain-containing protein 3B |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:112574 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q96RF0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q96RF0-F1 | Predicted | AlphaFoldDB |
536 variants for Q96RF0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA359722146 rs1355778996 |
2 | A>G | No |
ClinGen TOPMed |
|
|
COSM129346 CA359722154 rs1300981657 |
4 | R>C | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA359722166 rs1469688388 |
6 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1159260645 CA359722175 |
7 | A>V | No |
ClinGen gnomAD |
|
|
CA359722182 rs1408597146 |
9 | Y>H | No |
ClinGen gnomAD |
|
|
rs908877955 CA359722196 |
10 | D>E | No |
ClinGen TOPMed |
|
|
CA3264709 rs761895660 |
11 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA118897078 rs767797857 |
11 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264711 rs370346240 |
12 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1415229740 CA359722212 |
13 | S>* | No |
ClinGen gnomAD |
|
|
CA359722219 rs1237671087 |
14 | E>G | No |
ClinGen gnomAD |
|
|
rs1348281648 CA359722215 |
14 | E>K | No |
ClinGen gnomAD |
|
|
rs530216828 CA118897102 |
17 | G>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs530216828 CA3264714 |
17 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1213550661 CA359722248 |
18 | E>D | No |
ClinGen gnomAD |
|
|
rs1363080688 CA359722254 |
19 | I>S | No |
ClinGen TOPMed |
|
|
rs1391370884 CA359722256 |
20 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1437513913 CA359722267 |
22 | R>G | No |
ClinGen gnomAD |
|
|
rs867009376 CA118897108 |
22 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1024548693 CA118897113 |
24 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1378594507 CA359722294 |
26 | V>M | No |
ClinGen TOPMed |
|
|
CA118897114 rs867445771 |
28 | S>I | No |
ClinGen Ensembl |
|
|
CA3264717 rs375250474 |
28 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1390491895 CA359722325 |
31 | S>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1278171392 CA359722334 |
32 | E>* | No |
ClinGen TOPMed |
|
|
CA359722350 rs1337036256 |
33 | Q>R | No |
ClinGen gnomAD |
|
|
rs200508708 CA3264721 |
34 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs200508708 CA359722358 |
34 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359722393 rs957328977 |
36 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA359722384 rs1303313349 |
36 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1299341876 CA359722395 |
37 | G>S | No |
ClinGen gnomAD |
|
|
rs780111690 CA359722418 |
38 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs780111690 CA3264722 |
38 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA118897185 rs1022340011 |
39 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs112026794 CA359722439 |
40 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA118897187 rs913510307 |
41 | G>E | No |
ClinGen Ensembl |
|
|
CA359722443 rs1252995507 |
41 | G>R | No |
ClinGen gnomAD |
|
|
CA3264726 rs761731382 |
42 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA118897210 rs1047428978 |
42 | V>G | No |
ClinGen Ensembl |
|
|
rs761731382 CA3264727 |
42 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761731382 CA359722454 |
42 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1403269383 CA359722480 |
44 | S>N | No |
ClinGen TOPMed |
|
|
rs760711172 CA3264729 |
45 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1580087474 CA359722513 |
47 | D>N | No |
ClinGen Ensembl |
|
|
rs1195219099 CA359722526 |
48 | R>H | No |
ClinGen gnomAD |
|
|
CA359722528 rs1195219099 |
48 | R>P | No |
ClinGen gnomAD |
|
|
rs1168124250 CA359722613 |
53 | A>V | No |
ClinGen gnomAD |
|
|
rs753000521 CA3264734 |
55 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1443798310 CA359722673 |
57 | Q>R | No |
ClinGen gnomAD |
|
|
CA359722682 rs1442947971 |
58 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1193927533 CA359722696 |
59 | I>F | No |
ClinGen TOPMed |
|
|
CA359722716 rs1326193788 |
60 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1228693575 CA359722725 |
61 | A>P | No |
ClinGen gnomAD |
|
|
rs374095539 CA3264736 |
62 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1213095113 CA359722744 |
62 | P>R | No |
ClinGen gnomAD |
|
|
rs374095539 CA3264737 |
62 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA359722736 rs374095539 |
62 | P>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1468805942 CA359722783 |
64 | P>H | No |
ClinGen gnomAD |
|
|
CA3264739 rs779665216 |
65 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359722816 rs1259645822 |
66 | P>L | No |
ClinGen gnomAD |
|
|
CA359722875 rs1474036120 |
71 | G>D | No |
ClinGen gnomAD |
|
|
CA359722914 rs1163536198 |
73 | G>D | No |
ClinGen gnomAD |
|
|
rs866073066 CA118897314 |
73 | G>S | No |
ClinGen Ensembl |
|
|
CA359722931 rs1158941610 |
74 | A>S | No |
ClinGen gnomAD |
|
|
rs1282502129 CA359722964 |
76 | A>V | No |
ClinGen TOPMed |
|
|
CA118897318 rs886389790 |
80 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs748848429 CA3264740 |
80 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383104896 CA359723037 |
81 | V>M | No |
ClinGen gnomAD |
|
|
rs1353752520 CA359723069 |
83 | P>H | No |
ClinGen gnomAD |
|
|
CA3264741 rs768414360 |
84 | G>A | No |
ClinGen ExAC |
|
|
CA359723072 CA359723073 rs1293926311 |
84 | G>R | No |
ClinGen gnomAD |
|
|
CA359723089 rs1337025950 |
85 | G>C | No |
ClinGen gnomAD |
|
|
rs1226722245 CA359723107 |
86 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs970271877 CA359723109 |
87 | E>* | No |
ClinGen TOPMed |
|
|
rs1485533821 CA359723122 CA359723119 |
87 | E>D | No |
ClinGen gnomAD |
|
|
rs778964180 CA3264742 |
87 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs970271877 CA118897336 |
87 | E>K | No |
ClinGen TOPMed |
|
|
CA118897347 rs940382211 |
88 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs747869803 CA3264743 |
88 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs747869803 CA359723138 |
88 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA359723129 rs940382211 |
88 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359723126 rs940382211 |
88 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs773018918 CA3264745 |
89 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1418204180 CA359723148 |
89 | L>P | No |
ClinGen gnomAD |
|
|
rs1418204180 CA359723145 |
89 | L>Q | No |
ClinGen gnomAD |
|
|
rs1363678576 CA359723167 |
90 | P>H | No |
ClinGen gnomAD |
|
|
rs1363678576 CA359723172 |
90 | P>L | No |
ClinGen gnomAD |
|
|
rs771152867 CA3264747 |
90 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs771152867 CA359723155 |
90 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1410917384 CA359723181 |
91 | V>D | No |
ClinGen TOPMed |
|
|
rs1290931800 CA359723178 |
91 | V>I | No |
ClinGen gnomAD |
|
|
rs1313711976 CA359723206 |
92 | A>E | No |
ClinGen gnomAD |
|
|
CA359723201 rs765650574 |
92 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264750 rs765650574 |
92 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1313711976 CA359723215 |
92 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3264752 rs763198102 |
93 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763198102 CA359723227 |
93 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264751 rs753297212 |
93 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753297212 CA118897379 |
93 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1239689851 CA359723243 |
94 | P>R | No |
ClinGen gnomAD |
|
|
CA3264754 rs751996568 |
94 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751996568 CA359723233 |
94 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359723247 rs1262215068 |
95 | A>T | No |
ClinGen gnomAD |
|
|
CA118897394 rs938392920 |
96 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1486461331 CA359723298 |
98 | K>R | No |
ClinGen gnomAD |
|
|
rs1056674123 CA118897401 |
100 | P>A | No |
ClinGen TOPMed |
|
|
CA3264757 rs753270428 |
100 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1393877929 CA359723327 |
101 | P>R | No |
ClinGen gnomAD |
|
|
rs538587425 CA3264759 |
101 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA118897420 rs760780345 |
102 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA359723331 rs1223403051 |
102 | D>N | No |
ClinGen gnomAD |
|
|
rs748075878 CA3264760 |
103 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA359723369 rs1487881822 |
105 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA359723386 rs1322272612 |
107 | L>V | No |
ClinGen TOPMed |
|
|
rs1297618397 CA359723392 |
108 | L>M | No |
ClinGen gnomAD |
|
|
rs746811166 CA359723412 |
109 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA359723419 rs1311322735 |
110 | P>S | No |
ClinGen gnomAD |
|
|
rs1183481972 CA359723442 |
111 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs776971231 CA3264765 |
112 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1280821085 CA359723462 |
113 | A>V | No |
ClinGen gnomAD |
|
|
rs769958200 CA3264768 |
115 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264767 rs769958200 |
115 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1038526014 CA118897456 |
116 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs763471783 CA3264769 |
116 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA3264771 rs546984700 |
118 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA118897466 rs930384803 |
119 | F>V | No |
ClinGen TOPMed |
|
|
rs1408371034 CA359723543 |
120 | Q>* | No |
ClinGen gnomAD |
|
|
rs1408371034 CA359723542 |
120 | Q>E | No |
ClinGen gnomAD |
|
|
rs1169995160 CA359723550 |
120 | Q>H | No |
ClinGen gnomAD |
|
|
CA359723545 rs1373468574 |
120 | Q>P | No |
ClinGen TOPMed |
|
|
rs1355377115 CA359723561 |
121 | P>L | No |
ClinGen gnomAD |
|
|
CA3264774 rs565288645 |
122 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3264773 rs766104081 |
122 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359723575 rs1303798435 |
123 | G>S | No |
ClinGen gnomAD |
|
|
rs754616175 CA3264775 |
123 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA359723590 rs1365024594 |
125 | G>R | No |
ClinGen TOPMed |
|
|
CA359723589 rs1365024594 |
125 | G>S | No |
ClinGen TOPMed |
|
|
rs764752445 CA3264776 |
127 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264778 rs758262936 |
128 | Y>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264779 rs777754401 |
129 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359723675 rs1186347868 |
131 | G>D | No |
ClinGen gnomAD |
|
|
CA359723682 rs1162797905 |
132 | A>G | No |
ClinGen gnomAD |
|
|
CA3264781 rs536255107 |
132 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA359723693 rs1462083646 |
133 | L>P | No |
ClinGen gnomAD |
|
|
rs781240799 CA3264782 |
134 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA359723713 rs1351588163 |
135 | P>R | No |
ClinGen gnomAD |
|
|
rs1160199213 CA359723709 |
135 | P>S | No |
ClinGen TOPMed |
|
|
CA118897535 rs905766971 |
139 | Q>R | No |
ClinGen gnomAD |
|
|
rs769932602 CA3264784 |
140 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs143490328 CA3264786 |
141 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1333510773 CA359723811 |
142 | G>D | No |
ClinGen gnomAD |
|
|
rs368288748 CA3264787 |
143 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359723817 rs1292614786 |
143 | G>C | No |
ClinGen gnomAD |
|
|
CA3264788 rs368288748 |
143 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs868332723 CA118897550 |
145 | Q>P | No |
ClinGen Ensembl |
|
|
CA118897560 rs961904563 |
146 | A>G | No |
ClinGen TOPMed |
|
|
CA3264789 rs762233225 |
146 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA118897552 rs762233225 |
146 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3264790 rs767951209 |
147 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs971709082 CA118897566 |
150 | S>R | No |
ClinGen TOPMed |
|
|
rs1417493543 CA359723968 |
152 | D>G | No |
ClinGen gnomAD |
|
|
CA359723964 rs1186057298 |
152 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs867748072 CA118897567 |
153 | D>E | No |
ClinGen Ensembl |
|
|
rs537227406 CA3264794 |
155 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3264793 rs766578812 |
155 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359724017 rs766578812 |
155 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1287337908 CA359724061 |
157 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359724054 rs1317296225 |
157 | E>K | No |
ClinGen gnomAD |
|
|
rs1345585224 CA359724095 |
159 | D>Y | No |
ClinGen gnomAD |
|
|
rs763997720 CA3264798 |
160 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1358305114 CA359724142 |
161 | S>T | No |
ClinGen TOPMed |
|
|
rs1176599260 CA359724169 |
163 | T>A | No |
ClinGen TOPMed |
|
|
rs1415253372 CA359724187 |
164 | V>L | No |
ClinGen TOPMed |
|
|
CA3264803 rs750201994 |
168 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1223727139 CA359724252 |
168 | P>S | No |
ClinGen gnomAD |
|
|
rs1209228724 CA359724269 |
169 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359724267 rs1209228724 |
169 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1356286974 CA359724261 |
169 | G>S | No |
ClinGen gnomAD |
|
|
CA3264805 rs780211987 |
171 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780211987 CA359724301 |
171 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359724319 rs1238349353 |
173 | S>G | No |
ClinGen gnomAD |
|
|
CA359724334 rs1482569753 |
173 | S>R | No |
ClinGen TOPMed |
|
|
CA359724338 rs1473989212 |
174 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3264806 rs749370211 |
175 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs768893036 CA3264807 |
175 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359724387 rs1421259288 |
177 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA359724390 rs1171547544 |
178 | D>N | No |
ClinGen gnomAD |
|
|
CA359724389 rs1171547544 |
178 | D>Y | No |
ClinGen gnomAD |
|
|
CA359724399 rs1374431602 |
179 | L>V | No |
ClinGen gnomAD |
|
|
CA359724420 rs748613247 |
180 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs955534594 CA359724413 |
180 | D>N | No |
ClinGen TOPMed |
|
|
CA118897612 rs955534594 |
180 | D>Y | No |
ClinGen TOPMed |
|
|
CA359724425 rs1333463999 |
181 | G>S | No |
ClinGen gnomAD |
|
|
CA359724447 rs772468818 |
182 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA118897624 rs772468818 |
182 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772468818 CA3264810 |
182 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1379827672 CA359724464 |
183 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA359724469 rs1232489939 |
184 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3264811 rs773556595 |
185 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769472742 CA3264813 |
186 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs1397876496 CA359724486 |
186 | G>D | No |
ClinGen TOPMed |
|
|
CA359724489 rs1397876496 |
186 | G>V | No |
ClinGen TOPMed |
|
|
CA359724507 rs1437312991 |
189 | A>T | No |
ClinGen gnomAD |
|
|
CA359724529 rs1182676595 |
190 | A>V | No |
ClinGen gnomAD |
|
|
rs1441497177 CA359724532 |
191 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1052473199 CA118897649 |
192 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1394261218 CA359724573 |
194 | R>C | No |
ClinGen gnomAD |
|
|
rs1466410130 CA359724577 |
194 | R>H | No |
ClinGen gnomAD |
|
|
CA3264817 rs751093332 |
196 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs374567519 CA3264819 |
197 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750232266 CA3264820 |
198 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA3264821 rs542228619 |
198 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs964311384 CA118897667 |
199 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA359724620 rs1372169705 |
199 | S>T | No |
ClinGen gnomAD |
|
|
CA3264822 rs780288239 |
200 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1197558784 CA359724653 |
201 | L>P | No |
ClinGen TOPMed |
|
|
CA3264825 rs779075343 |
202 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359724707 rs1252369517 |
205 | S>F | No |
ClinGen gnomAD |
|
|
rs920057148 CA118897684 |
206 | R>C | No |
ClinGen Ensembl |
|
|
CA359724755 rs1321027142 |
208 | G>C | No |
ClinGen TOPMed |
|
|
rs1474896151 CA359724756 |
208 | G>D | No |
ClinGen gnomAD |
|
|
rs1474896151 CA359724758 |
208 | G>V | No |
ClinGen gnomAD |
|
|
rs1580088891 CA359724777 |
210 | V>A | No |
ClinGen Ensembl |
|
|
rs371334283 CA3264829 |
210 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371334283 CA359724772 |
210 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777012786 CA359724818 |
212 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777012786 CA359724815 |
212 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264833 rs777012786 |
212 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359724811 rs1392136670 |
212 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359724806 rs1392136670 |
212 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1456495688 CA359724827 |
213 | Q>* | No |
ClinGen TOPMed |
|
|
rs1228442388 CA359724884 |
216 | P>R | No |
ClinGen gnomAD |
|
|
CA3264835 rs201253342 |
216 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761300441 CA3264837 |
219 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264838 rs761300441 |
219 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359724957 rs1561110962 |
221 | S>N | No |
ClinGen Ensembl |
|
|
rs1488778817 CA359724989 |
223 | A>V | No |
ClinGen gnomAD |
|
|
CA3264840 rs199620482 |
224 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1178487419 CA359725004 |
225 | V>M | No |
ClinGen TOPMed |
|
|
CA118897767 rs905814644 |
227 | R>C | No |
ClinGen Ensembl |
|
|
CA359725042 rs1193917904 |
227 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA359725210 rs778312169 |
236 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs778312169 CA3264848 |
236 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA359725266 rs1308248292 |
239 | G>C | No |
ClinGen TOPMed |
|
|
CA3264852 rs746238651 |
242 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA359725350 rs1313571663 |
245 | L>V | No |
ClinGen gnomAD |
|
|
rs1322184420 CA359725360 |
246 | G>R | No |
ClinGen gnomAD |
|
|
CA3264856 rs771439275 |
247 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs141661757 CA3264855 |
247 | E>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
rs772796832 CA3264857 |
248 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM593093 rs760469131 CA3264858 COSM593094 |
248 | A>V | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1186518094 CA359725437 |
251 | F>V | No |
ClinGen gnomAD |
|
|
CA359725456 rs1256254995 |
252 | V>L | No |
ClinGen gnomAD |
|
|
CA359725511 rs749075689 |
254 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368335835 CA3264861 |
255 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368335835 CA359725524 |
255 | G>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359725650 rs1420639730 |
260 | V>M | No |
ClinGen TOPMed |
|
|
CA359725670 rs1580089211 |
261 | V>G | No |
ClinGen Ensembl |
|
|
CA3264864 rs758678192 |
261 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3264865 rs764031987 |
262 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs565653634 CA3264866 |
263 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA118897914 rs974255513 |
265 | Y>C | No |
ClinGen TOPMed |
|
|
CA3264868 rs781715622 |
266 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359725762 rs1285277509 |
266 | G>S | No |
ClinGen TOPMed |
|
|
CA359725777 rs781715622 |
266 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359725783 rs1209684573 |
267 | P>H | No |
ClinGen gnomAD |
|
|
rs756523700 CA359725827 |
268 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264870 rs756523700 |
268 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359725813 rs1237329672 |
268 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs778509796 CA3264871 |
271 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs747702403 CA3264872 |
272 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA3264873 rs771766727 |
272 | N>K | No |
ClinGen ExAC |
|
|
rs746594058 CA3264875 |
273 | P>H | No |
ClinGen ExAC gnomAD |
|
|
rs746594058 CA359725955 |
273 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs772527641 CA3264874 |
273 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA118897948 rs956127417 |
274 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA359725972 rs956127417 |
274 | Y>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1580089336 CA359725984 |
274 | Y>S | No |
ClinGen Ensembl |
|
|
rs1454155258 CA359726017 |
275 | P>L | No |
ClinGen gnomAD |
|
|
CA3264877 rs374497194 |
276 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs867519520 CA118897950 |
277 | Q>P | No |
ClinGen Ensembl |
|
|
CA359726130 rs1460512006 |
279 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs951519744 CA118897955 |
280 | I>V | No |
ClinGen Ensembl |
|
|
COSM1642756 rs548196245 CA3264881 COSM1642757 |
281 | D>N | stomach [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
CA3264884 rs751589442 |
284 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA3264885 rs761941472 |
285 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA3264888 rs756632021 |
287 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1465229274 CA359726337 |
287 | T>S | No |
ClinGen TOPMed |
|
|
rs1429600788 CA359726391 |
291 | G>S | No |
ClinGen TOPMed |
|
|
rs61999266 CA359726448 |
293 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs754231394 CA3264891 |
296 | I>N | No |
ClinGen ExAC |
|
|
rs1261872737 CA359726488 |
296 | I>V | No |
ClinGen TOPMed |
|
|
CA359726556 rs1192190201 |
299 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1169751081 CA359726569 |
300 | L>P | No |
ClinGen gnomAD |
|
|
rs777538472 CA118898008 |
300 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA118898040 rs889204069 |
301 | V>G | No |
ClinGen TOPMed |
|
|
rs770604470 CA3264895 |
301 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780880095 CA3264896 |
302 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA359726600 rs1435428634 |
303 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1006261399 CA118898052 |
304 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA359726629 rs1369199218 |
305 | T>A | No |
ClinGen gnomAD |
|
|
COSM1068741 CA3264899 COSM1068743 rs148273455 |
305 | T>M | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA3264900 rs775088034 |
306 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1219982888 CA359726661 |
307 | V>L | No |
ClinGen gnomAD |
|
|
rs762861892 CA3264901 |
308 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA118898080 rs141392594 |
308 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3264903 rs141392594 |
308 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762861892 CA3264902 |
308 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264905 rs559194532 |
310 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1422275602 CA359726723 |
311 | R>Q | No |
ClinGen TOPMed |
|
|
CA359726800 rs1168061518 |
316 | F>Y | No |
ClinGen TOPMed |
|
|
CA3264907 rs374767533 |
317 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA359726879 rs1186778819 |
320 | Y>* | No |
ClinGen TOPMed |
|
|
CA359726860 rs1162901508 |
320 | Y>D | No |
ClinGen gnomAD |
|
|
CA359726854 rs1162901508 |
320 | Y>H | No |
ClinGen gnomAD |
|
|
CA359726883 rs1415526498 |
321 | A>T | No |
ClinGen gnomAD |
|
|
CA359726889 rs1404698944 |
321 | A>V | No |
ClinGen gnomAD |
|
|
rs755413202 CA3264910 |
324 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA359726921 rs1580089683 |
325 | E>G | No |
ClinGen Ensembl |
|
|
rs1580089701 CA359726947 |
327 | F>V | No |
ClinGen Ensembl |
|
|
CA359726979 rs1257497501 |
329 | V>F | No |
ClinGen TOPMed |
|
|
CA359726975 rs1257497501 |
329 | V>I | No |
ClinGen TOPMed |
|
|
CA3264914 rs780781962 |
333 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs749002872 CA3264918 |
343 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1444122384 CA359727135 |
345 | E>Q | No |
ClinGen TOPMed |
|
|
rs765535897 CA118898171 |
349 | I>F | No |
ClinGen Ensembl |
|
|
rs370777622 CA118898174 |
350 | S>C | No |
ClinGen ESP TOPMed |
|
|
rs1473199958 CA359727215 |
352 | R>G | No |
ClinGen gnomAD |
|
|
rs1182370706 CA359727240 |
354 | K>N | No |
ClinGen gnomAD |
|
|
CA359727270 rs1580089833 |
357 | I>S | No |
ClinGen Ensembl |
|
|
rs1054351564 CA118898186 |
363 | M>T | No |
ClinGen Ensembl |
|
|
rs1415926919 CA359727358 |
364 | A>T | No |
ClinGen gnomAD |
|
|
rs1157853184 CA359727376 |
365 | S>I | No |
ClinGen gnomAD |
|
|
CA3264922 COSM1437820 rs772299231 COSM1437821 |
373 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA3264923 rs773270257 |
374 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359727475 rs1339357433 |
374 | V>I | No |
ClinGen gnomAD |
|
|
CA359727497 rs1371835473 |
376 | Q>* | No |
ClinGen gnomAD |
|
|
CA3264925 rs766767247 |
379 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA3264927 COSM1266394 rs759984674 COSM1266395 |
380 | T>M | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs150828236 CA3264926 |
380 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359727556 rs1205512653 |
381 | C>Y | No |
ClinGen TOPMed |
|
|
CA118898219 rs1041557054 |
382 | P>S | No |
ClinGen gnomAD |
|
|
CA359727573 rs1239084559 |
383 | S>R | No |
ClinGen gnomAD |
|
|
CA3264930 rs139290537 |
385 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs988301482 CA118898229 |
386 | D>H | No |
ClinGen TOPMed |
|
|
rs767335549 CA3264932 |
389 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs767335549 CA3264931 |
389 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs1380704079 CA359727649 |
389 | A>P | No |
ClinGen gnomAD |
|
|
CA359727705 rs1294367406 |
397 | A>T | No |
ClinGen TOPMed |
|
|
CA3264938 rs747998642 |
401 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA118898268 rs200786852 |
401 | E>V | No |
ClinGen Ensembl |
|
|
CA3264939 rs772280770 |
402 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA118898274 rs986577794 |
403 | V>L | No |
ClinGen TOPMed |
|
|
CA359727755 rs1580090044 |
404 | G>S | No |
ClinGen Ensembl |
|
|
rs199557419 CA3264940 |
405 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199557419 CA3264941 |
405 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776606069 CA3264943 |
410 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA118898302 rs988750079 |
410 | T>P | No |
ClinGen Ensembl |
|
|
CA359727818 rs1425217126 |
411 | L>F | No |
ClinGen TOPMed |
|
|
CA359727831 rs1220980444 |
412 | S>G | No |
ClinGen gnomAD |
|
|
CA3264944 rs760022478 |
412 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs772068237 CA118898310 |
413 | T>M | No |
ClinGen TOPMed |
|
|
rs1027222000 CA359727853 |
414 | P>A | No |
ClinGen TOPMed |
|
|
rs775983988 CA3264947 |
414 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA118898324 rs1027222000 |
414 | P>S | No |
ClinGen TOPMed |
|
|
CA118898336 rs868484252 |
415 | P>H | No |
ClinGen gnomAD |
|
|
rs763477325 CA3264948 |
415 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3264949 rs767245658 |
416 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs376291219 CA3264951 |
417 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359727885 rs1173759546 |
418 | A>T | No |
ClinGen gnomAD |
|
|
CA3264950 rs746143131 |
420 | D>G | No |
ClinGen ExAC |
|
|
rs1561111844 CA359727910 |
420 | D>V | No |
ClinGen Ensembl |
|
|
rs374196636 CA3264953 |
422 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753288583 CA3264954 |
423 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA359728546 rs1198842846 |
424 | V>G | No |
ClinGen TOPMed |
|
|
rs929145638 CA118898366 |
424 | V>M | No |
ClinGen TOPMed |
|
|
rs778891755 CA3264956 |
427 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA359728592 rs1323349285 |
428 | I>V | No |
ClinGen gnomAD |
|
|
CA359728613 CA359728611 rs1438899018 |
429 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs758240285 CA3264958 |
430 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA3264959 rs777568307 |
431 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA359728644 rs1258572136 |
432 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs747215822 CA3264960 |
433 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA3264963 rs745992116 |
436 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA359728775 rs1434866835 |
442 | A>T | No |
ClinGen gnomAD |
|
|
CA3264969 rs760304544 |
446 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA3264970 rs766009858 |
446 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA3264972 rs759011378 |
447 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs765139851 CA3264973 |
447 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs759011378 CA118898436 |
447 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1296574274 CA359728838 |
448 | T>A | No |
ClinGen gnomAD |
|
|
rs752584405 CA3264974 |
448 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs369102206 CA118898459 |
450 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359728860 rs1280212925 |
450 | N>S | No |
ClinGen gnomAD |
|
|
CA3264976 rs777478470 |
451 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA359728892 rs1264836696 |
453 | A>T | No |
ClinGen gnomAD |
|
|
CA359728900 rs1356782237 |
453 | A>V | No |
ClinGen gnomAD |
|
|
CA3264977 rs751325405 |
454 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
COSM3697261 COSM3697260 rs766025431 CA118898485 |
454 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA359728916 rs1487759734 |
455 | K>E | No |
ClinGen gnomAD |
|
|
rs1330195899 CA359728926 |
456 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA359728925 rs1330195899 |
456 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs757487264 CA3264978 |
456 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1264729931 CA359728943 |
457 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1421592383 CA359728961 |
458 | T>I | No |
ClinGen gnomAD |
|
|
rs745927905 CA3264980 |
459 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA359729021 rs1580090465 |
464 | Y>D | No |
ClinGen Ensembl |
|
|
rs550269444 CA118898495 |
465 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
CA359729062 rs1580090479 |
467 | V>G | No |
ClinGen Ensembl |
|
|
CA359729069 rs1480784257 |
468 | G>S | No |
ClinGen TOPMed |
|
|
RCV000964123 rs190203684 CA3264983 |
470 | S>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3264986 rs774715540 |
471 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1311904479 CA359729120 |
472 | R>C | No |
ClinGen gnomAD |
|
|
CA359729124 rs1341008247 |
472 | R>H | No |
ClinGen gnomAD |
|
|
CA359729129 rs1239499587 |
473 | G>S | No |
ClinGen Ensembl |
|
|
rs1561112082 CA359729138 |
473 | G>V | No |
ClinGen Ensembl |
|
|
rs759256710 CA3264990 |
476 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA118898544 rs1041609334 |
477 | A>S | No |
ClinGen Ensembl |
|
|
CA359729188 rs1352462356 |
477 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs764688470 CA3264991 |
479 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA359729237 rs1199405577 |
481 | D>H | No |
ClinGen gnomAD |
|
|
rs763326737 CA118898562 |
483 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
COSM4141996 rs1177111177 COSM4141995 CA359729304 |
485 | F>L | ovary [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3264995 rs751365648 |
488 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1561112154 CA359729341 |
490 | N>Y | No |
ClinGen Ensembl |
|
|
rs1402773980 CA359729357 |
492 | A>S | No |
ClinGen gnomAD |
|
|
CA118898585 rs769402714 |
493 | I>V | No |
ClinGen gnomAD |
|
|
CA118898600 rs752045486 |
496 | T>I | No |
ClinGen Ensembl |
|
|
rs1240684048 CA359729403 |
498 | D>G | No |
ClinGen gnomAD |
|
|
rs1240684048 CA359729405 |
498 | D>V | No |
ClinGen gnomAD |
|
|
rs376723402 CA3265002 |
499 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359729423 rs1310084422 |
500 | Y>C | No |
ClinGen gnomAD |
|
|
rs899901213 CA359729446 |
501 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3265003 rs779332439 |
502 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA359729449 rs142046953 |
502 | A>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs142046953 CA118898615 |
502 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1197271173 CA359729460 |
503 | I>T | No |
ClinGen gnomAD |
|
|
rs757834095 CA3265004 |
505 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1458485287 CA359729488 |
506 | L>F | No |
ClinGen gnomAD |
|
|
rs1423244826 CA359729510 |
508 | A>S | No |
ClinGen gnomAD |
|
|
CA3265007 rs745459385 |
513 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs774968424 CA3265010 |
516 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1447166642 CA359729605 |
517 | P>H | No |
ClinGen gnomAD |
|
|
CA359729609 rs1048379768 |
518 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA118898643 rs1048379768 |
518 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1428408506 CA359729640 |
520 | D>V | No |
ClinGen TOPMed |
|
|
CA3265012 rs371638046 |
523 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs761831451 CA3265014 |
525 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs767173190 CA3265015 |
525 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs1242920966 CA359729685 |
526 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA118898654 rs374514427 |
527 | G>R | No |
ClinGen ESP |
|
|
rs756342513 CA3265017 |
529 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1472907497 CA359729733 |
530 | A>V | No |
ClinGen gnomAD |
|
|
rs753941307 CA3265019 |
532 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359729765 rs1184067569 |
533 | P>L | No |
ClinGen gnomAD |
|
|
rs1193052566 CA359729786 |
535 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs779074773 CA3265021 |
536 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs372239672 CA3265022 |
537 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1172510265 CA359729814 |
537 | H>Q | No |
ClinGen gnomAD |
|
|
rs887394879 CA118898685 |
542 | K>R | No |
ClinGen Ensembl |
|
|
rs1397517105 CA359729898 |
544 | W>* | No |
ClinGen gnomAD |
|
|
rs199538676 CA3265025 |
544 | W>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200821247 CA3265024 |
544 | W>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA118898692 rs751092684 |
545 | P>L | No |
ClinGen gnomAD |
|
|
rs1226546516 CA359729919 |
546 | L>* | No |
ClinGen TOPMed |
|
|
CA3265026 rs769431195 |
547 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359729924 rs769431195 |
547 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359729936 rs1216807523 |
548 | Q>* | No |
ClinGen gnomAD |
|
|
CA3265028 rs748773217 |
550 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA359729962 rs1315542169 |
551 | W>C | No |
ClinGen TOPMed |
|
|
CA3265030 rs768001286 CA3265029 |
551 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA3265031 rs761586735 |
553 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1294146543 CA359729980 |
554 | L>S | No |
ClinGen gnomAD |
|
|
CA359729986 rs1487450920 |
555 | C>G | No |
ClinGen gnomAD |
|
|
rs1192985830 CA359729992 |
556 | R>G | No |
ClinGen gnomAD |
|
|
CA3265032 rs767499547 |
556 | R>K | No |
ClinGen ExAC |
|
|
rs1003050140 CA118898731 |
558 | K>R | No |
ClinGen Ensembl |
|
|
rs1478868527 CA359730013 |
559 | G>E | No |
ClinGen gnomAD |
|
|
rs1188200951 CA359730019 |
560 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1188200951 CA359730021 |
560 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs760591201 CA3265036 |
561 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1355219019 CA359730039 |
563 | T>I | No |
ClinGen TOPMed |
|
|
CA359730040 rs1403130771 |
564 | A>T | No |
ClinGen gnomAD |
|
|
CA3265039 rs755262355 |
566 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs754066996 CA3265038 |
566 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3265042 rs765164796 |
571 | E>* | No |
ClinGen ExAC gnomAD |
|
|
VAR_052480 CA3265043 rs2548612 |
571 | E>D | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3265040 rs765164796 |
571 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs765164796 CA3265041 |
571 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA359730086 rs1184664102 |
572 | S>A | No |
ClinGen TOPMed |
|
|
CA3265044 rs751889217 |
572 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757667838 CA3265045 |
573 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA359730099 rs1317641666 |
574 | S>P | No |
ClinGen gnomAD |
|
|
CA3265047 rs748898175 |
575 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs778226020 CA3265050 |
577 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA359730134 rs1044316604 |
579 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1044316604 CA118898841 |
579 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA3265051 rs367802950 |
580 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359730141 rs1183917896 |
580 | S>R | No |
ClinGen gnomAD |
|
|
rs114605253 CA3265052 |
581 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1580091218 CA359730150 |
582 | D>Y | No |
ClinGen Ensembl |
|
|
rs760714721 CA3265054 |
583 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs773334865 CA3265053 |
583 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs759621029 CA3265057 |
585 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA359730168 rs575870397 |
585 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3265056 rs575870397 |
585 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1449374837 CA359730208 |
591 | E>* | No |
ClinGen gnomAD |
|
|
VAR_052481 rs13162502 CA3265060 |
593 | K>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA359730238 rs1310191349 |
595 | D>Y | No |
ClinGen gnomAD |
|
|
CA118898865 rs754703699 |
599 | G>D | No |
ClinGen gnomAD |
|
|
CA118898871 rs943913214 |
600 | S>G | No |
ClinGen Ensembl |
|
|
rs752011336 CA3265062 |
600 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359730272 rs1456833827 |
600 | S>T | No |
ClinGen TOPMed |
|
|
CA118898890 rs778679293 |
603 | L>F | No |
ClinGen Ensembl |
|
|
CA3265065 rs750798298 |
604 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA3265066 rs747998734 |
605 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359730310 rs1177784684 |
606 | L>V | No |
ClinGen gnomAD |
|
|
CA3265067 rs778690497 |
608 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA118898923 rs931389786 |
609 | G>R | No |
ClinGen Ensembl |
|
|
rs1423824469 CA359730335 |
610 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs771566499 CA3265069 |
612 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
rs1580091408 CA359730357 |
613 | S>Y | No |
ClinGen Ensembl |
|
|
CA359730373 rs1398757332 |
615 | S>L | No |
ClinGen gnomAD |
|
|
CA359730371 rs1398757332 |
615 | S>W | No |
ClinGen gnomAD |
|
|
CA359730377 rs1354554453 |
616 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs771976401 CA3265071 |
617 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3265072 rs201770335 |
618 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA359730389 rs1332501037 |
618 | Q>K | No |
ClinGen gnomAD |
|
|
rs1224670876 CA359730403 |
620 | V>I | No |
ClinGen TOPMed |
|
|
CA118898999 rs1048389848 |
621 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA118899019 rs1017826751 |
623 | M>R | No |
ClinGen TOPMed |
|
|
CA3265075 rs138626050 |
624 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1264861331 CA359730494 |
627 | S>* | No |
ClinGen gnomAD |
|
|
CA3265078 rs769572647 |
628 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3265077 rs775829881 |
628 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA3265079 rs779733826 |
629 | F>K | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q96RF0
5 regional properties for Q96RF0
Functions
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| extrinsic component of cytoplasmic side of plasma membrane | The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| recycling endosome membrane | The lipid bilayer surrounding a recycling endosome. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| phosphatidylinositol binding | Binding to an inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives. |
| phosphatidylinositol-4,5-bisphosphate binding | Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions. |
8 GO annotations of biological process
| Name | Definition |
|---|---|
| cleavage furrow formation | Generation of the cleavage furrow, a shallow groove in the cell surface near the old metaphase plate that marks the site of cytokinesis. This process includes the recruitment and localized activation of signals such as RhoA at the site of the future furrow to ensure that furrowing initiates at the correct site in the cell. |
| endocytosis | A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. |
| endosomal transport | The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane. |
| mitotic cytokinesis | A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells. |
| plasma membrane tubulation | A membrane tubulation process occurring in a plasma membrane. |
| positive regulation of autophagosome assembly | Any process that activates or increases the frequency, rate or extent of autophagic vacuole assembly. |
| positive regulation of GTPase activity | Any process that activates or increases the activity of a GTPase. |
| protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9Y5X1 | SNX9 | Sorting nexin-9 | Homo sapiens (Human) | PR |
| Q8WV41 | SNX33 | Sorting nexin-33 | Homo sapiens (Human) | PR |
| Q91VH2 | Snx9 | Sorting nexin-9 | Mus musculus (Mouse) | PR |
| Q91ZR2 | Snx18 | Sorting nexin-18 | Mus musculus (Mouse) | PR |
| Q28GP7 | snx33 | Sorting nexin-33 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALRARALYD | FRSENPGEIS | LREHEVLSLC | SEQDIEGWLE | GVNSRGDRGL | FPASYVQVIR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| APEPGPAGDG | GPGAPARYAN | VPPGGFEPLP | VAPPASFKPP | PDAFQALLQP | QQAPPPSTFQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PPGAGFPYGG | GALQPSPQQL | YGGYQASQGS | DDDWDDEWDD | SSTVADEPGA | LGSGAYPDLD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| GSSSAGVGAA | GRYRLSTRSD | LSLGSRGGSV | PPQHHPSGPK | SSATVSRNLN | RFSTFVKSGG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EAFVLGEASG | FVKDGDKLCV | VLGPYGPEWQ | ENPYPFQCTI | DDPTKQTKFK | GMKSYISYKL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VPTHTQVPVH | RRYKHFDWLY | ARLAEKFPVI | SVPHLPEKQA | TGRFEEDFIS | KRRKGLIWWM |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NHMASHPVLA | QCDVFQHFLT | CPSSTDEKAW | KQGKRKAEKD | EMVGANFFLT | LSTPPAAALD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LQEVESKIDG | FKCFTKKMDD | SALQLNHTAN | EFARKQVTGF | KKEYQKVGQS | FRGLSQAFEL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| DQQAFSVGLN | QAIAFTGDAY | DAIGELFAEQ | PRQDLDPVMD | LLALYQGHLA | NFPDIIHVQK |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GKAWPLEQVI | WSVLCRLKGA | TLTAVPLWVS | ESYSTGEEAS | RDVDAWVFSL | ECKLDCSTGS |
| 610 | 620 | ||||
| FLLEYLALGN | EYSFSKVQRV | PLMTVLSF |