Q8WV41
Gene name |
SNX33 (SH3PX3, SH3PXD3C, SNX30) |
Protein name |
Sorting nexin-33 |
Names |
SH3 and PX domain-containing protein 3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:257364 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q8WV41
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4AKV | X-ray | 265 A | A/B | 212-574 | PDB |
| AF-Q8WV41-F1 | Predicted | AlphaFoldDB |
412 variants for Q8WV41
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| TCGA novel | 2 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759689830 CA7668998 |
4 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs765611816 CA7668999 |
6 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs866932557 CA272941492 |
6 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs776040564 CA7669000 |
7 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA7669001 rs763595271 |
9 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393471772 rs1227405250 |
9 | Y>N | No |
ClinGen TOPMed |
|
|
CA393471782 rs1191958442 |
10 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs751986272 CA7669003 |
12 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA7669004 rs755762188 |
15 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs1383358839 CA393471840 |
18 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA393471850 rs1339803148 |
19 | I>V | No |
ClinGen TOPMed |
|
|
rs766163162 CA7669005 |
20 | S>G | No |
ClinGen ExAC |
|
|
CA7669006 rs144747980 |
24 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669007 rs754491251 |
24 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs144747980 CA393471886 |
24 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1377409096 CA393471961 |
32 | E>D | No |
ClinGen gnomAD |
|
|
CA393471950 rs1302205408 |
32 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA393471964 rs1595997985 |
33 | T>P | No |
ClinGen Ensembl |
|
|
rs746807268 CA7669012 |
41 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 42 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393472151 rs771099361 |
42 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA393472147 rs771099361 |
42 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA7669013 rs771099361 |
42 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA7669014 rs200030831 |
43 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA7669015 rs746123425 |
45 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA7669016 rs751188113 |
45 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377212143 CA393472262 |
47 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1595998002 CA393472252 |
47 | E>G | No |
ClinGen Ensembl |
|
|
CA393472341 rs1471888140 |
53 | A>T | No |
ClinGen TOPMed |
|
|
CA7669019 rs769291515 |
53 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393472361 rs1362415798 |
54 | S>C | No |
ClinGen gnomAD |
|
|
rs1194529529 CA393472367 |
55 | Y>H | No |
ClinGen TOPMed |
|
| TCGA novel | 56 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 57 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs541061274 CA272941624 |
58 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs753499893 CA7669023 |
59 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367776246 COSM701837 CA7669022 |
59 | V>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs371622892 CA7669024 |
60 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371622892 CA393472429 |
60 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs190829588 CA7669025 |
60 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA272941675 rs752158302 |
61 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669026 rs752158302 |
61 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758262508 CA7669027 |
67 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669029 rs751304006 |
67 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA7669028 rs777717282 |
67 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA272941700 rs758262508 |
67 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669030 rs757022070 |
68 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201133101 CA7669031 |
69 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs376935129 CA7669033 |
70 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669032 rs376935129 |
70 | Y>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 71 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA7669034 rs780114828 |
73 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769238510 CA7669036 |
76 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769238510 CA393472673 |
76 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762452142 CA7669038 |
77 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774979843 CA7669037 |
77 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669039 rs766961204 |
79 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA393472720 rs1473947682 |
80 | A>P | No |
ClinGen gnomAD |
|
|
CA272941744 rs541973865 |
81 | Q>E | No |
ClinGen 1000Genomes |
|
|
rs1469237300 CA393472750 |
81 | Q>H | No |
ClinGen TOPMed |
|
|
CA7669040 rs773510877 |
82 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759174387 CA7669041 |
85 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs148674276 CA7669042 |
86 | N>S | No |
ClinGen ESP ExAC gnomAD |
|
|
rs752159207 CA7669043 |
87 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA7669046 rs751465424 |
89 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA7669047 rs757207380 |
89 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1292806517 CA393472922 |
90 | V>G | No |
ClinGen gnomAD |
|
|
rs767329867 CA7669048 |
90 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs756320313 CA7669050 |
92 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA393472945 rs1249799854 |
92 | S>N | No |
ClinGen gnomAD |
|
|
rs369471317 CA7669051 |
93 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393472994 rs1490204220 |
97 | G>C | No |
ClinGen TOPMed |
|
|
rs1369478680 CA393473020 |
99 | G>A | No |
ClinGen TOPMed |
|
|
CA7669052 rs749572563 |
99 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376544301 CA7669053 |
100 | S>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669054 rs779203982 |
100 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA272941853 rs924301562 |
103 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1349324362 CA393473094 |
104 | S>L | No |
ClinGen TOPMed |
|
|
CA393473106 rs1429731578 |
106 | Q>K | No |
ClinGen gnomAD |
|
|
CA393473120 rs1167906480 |
107 | G>C | No |
ClinGen gnomAD |
|
|
rs921019626 CA272941860 |
107 | G>V | No |
ClinGen TOPMed |
|
| TCGA novel | 110 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA272941864 rs953788186 |
111 | E>K | No |
ClinGen Ensembl |
|
|
CA7669058 CA7669057 rs371112191 |
112 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669059 rs373531151 |
114 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA272941883 rs376433115 |
115 | D>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs775099131 CA7669060 |
118 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669061 rs762631861 |
120 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA393473410 rs773908381 |
122 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA7669063 rs773908381 |
122 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs200632506 CA7669066 |
123 | G>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669065 rs200632506 |
123 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766319506 CA7669068 |
126 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1282987818 CA393473517 |
126 | V>L | No |
ClinGen gnomAD |
|
|
rs755312607 CA7669070 |
128 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA7669069 rs151223588 |
128 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393473570 rs1350775123 |
129 | E>K | No |
ClinGen gnomAD |
|
|
rs202135342 CA7669072 |
131 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA7669071 rs779081434 |
131 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA7669073 rs758895108 |
133 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs201961630 CA7669076 |
134 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs372555211 CA7669074 |
134 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201961630 CA7669075 |
134 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1595998155 CA393473703 |
135 | L>P | No |
ClinGen Ensembl |
|
|
rs748924668 CA7669078 |
137 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs748924668 CA393473730 |
137 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA393473748 rs1455419181 |
138 | N>S | No |
ClinGen gnomAD |
|
|
CA7669079 rs768310408 |
139 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs140066935 CA393473789 |
140 | H>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669080 rs140066935 |
140 | H>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1305863313 CA393473787 |
140 | H>Y | No |
ClinGen gnomAD |
|
|
CA393473807 rs1308344402 |
141 | P>T | No |
ClinGen gnomAD |
|
|
rs1319318603 CA393473841 |
142 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1319318603 CA393473836 |
142 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA272941978 rs199711200 |
143 | L>V | No |
ClinGen Ensembl |
|
|
rs767105040 CA7669082 |
144 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1016829514 CA272941985 |
144 | N>S | No |
ClinGen TOPMed |
|
|
rs760734892 CA7669084 |
145 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1215213127 CA393473928 |
146 | S>F | No |
ClinGen gnomAD |
|
|
CA7669085 rs766266501 |
147 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1471284538 CA393473943 |
148 | P>A | No |
ClinGen TOPMed |
|
|
rs1471284538 CA393473946 |
148 | P>S | No |
ClinGen TOPMed |
|
|
rs996682669 CA272942021 |
149 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs753703376 CA7669087 |
150 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA7669086 rs753703376 |
150 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs902526510 CA272942054 |
150 | A>V | No |
ClinGen Ensembl |
|
|
CA272942061 rs923023608 |
151 | Y>S | No |
ClinGen Ensembl |
|
|
CA7669088 rs79030022 |
152 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758382809 CA7669090 |
153 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752769880 CA7669089 |
153 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA393474124 rs1461984516 |
155 | H>Y | No |
ClinGen gnomAD |
|
|
rs752003123 CA7669092 |
156 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs750809910 CA7669091 |
156 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA272942081 rs750809910 |
156 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs138868218 CA272942103 |
157 | A>P | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs138868218 CA272942100 |
157 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA393474197 rs1595998205 |
158 | F>S | No |
ClinGen Ensembl |
|
|
CA7669094 rs781477737 |
159 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA7669093 rs757817318 |
159 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs201668627 CA7669096 |
160 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669098 rs747875360 |
164 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1348659234 CA393474315 |
165 | E>Q | No |
ClinGen TOPMed |
|
|
rs149404528 CA7669100 |
166 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771480251 CA7669099 |
166 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA272942165 rs989777038 |
167 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA393474376 rs1595998225 |
168 | D>G | No |
ClinGen Ensembl |
|
|
rs770992901 CA7669102 |
169 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA393474406 rs1595998230 |
170 | L>P | No |
ClinGen Ensembl |
|
|
rs776523272 CA7669103 |
171 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA7669104 rs759431642 |
171 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1167267877 CA393474434 |
174 | K>R | No |
ClinGen gnomAD |
|
|
CA7669105 rs765176187 |
175 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs200605367 CA272942183 |
177 | S>N | No |
ClinGen 1000Genomes |
|
|
CA7669107 rs535545886 |
177 | S>R | No |
ClinGen 1000Genomes ExAC |
|
|
rs751674874 CA7669109 |
178 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs781687758 CA7669111 |
179 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA7669112 rs750977657 |
180 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669114 rs780533477 |
181 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs747741043 COSM1227080 CA7669115 |
181 | R>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA7669116 rs373875066 |
185 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1164827288 CA393474572 |
185 | R>H | No |
ClinGen TOPMed |
|
|
rs1280771990 CA393474654 |
190 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs561996646 CA272942264 |
191 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1255543350 CA393474747 |
195 | E>D | No |
ClinGen gnomAD |
|
|
rs1185683285 CA393474738 |
195 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7669118 rs746544703 |
196 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393474835 rs1206643857 |
201 | D>V | No |
ClinGen TOPMed |
|
| TCGA novel | 203 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs143802641 CA7669123 |
204 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368502863 CA7669122 |
204 | M>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368502863 CA7669121 |
204 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1395988070 CA393474914 |
207 | K>E | No |
ClinGen TOPMed |
|
|
CA7669124 rs372586273 |
208 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669126 rs774255201 |
209 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA393474950 rs941303391 |
209 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA272942318 rs941303391 |
209 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs774255201 CA272942324 |
209 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 210 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 211 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1271571285 CA393475014 |
212 | Y>C | No |
ClinGen gnomAD |
|
|
rs527425529 CA7669127 |
212 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1055006956 CA272942331 |
213 | S>F | No |
ClinGen Ensembl |
|
|
rs767623354 CA393475062 |
214 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs767623354 CA7669128 |
214 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1280836931 CA393475118 |
216 | M>T | No |
ClinGen gnomAD |
|
|
CA393475149 rs1458940805 |
218 | P>T | No |
ClinGen TOPMed |
|
|
CA7669130 rs747196361 |
219 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA272942353 rs747196361 |
219 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1447888847 CA393475190 |
219 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 220 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768880962 CA7669131 |
224 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393475345 rs1216507310 |
225 | A>S | No |
ClinGen gnomAD |
|
|
rs1243916215 CA393475356 |
226 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA7669134 rs777499852 |
231 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA272942403 rs775834713 |
231 | A>V | No |
ClinGen TOPMed |
|
|
CA393475485 rs1172342494 |
233 | S>P | No |
ClinGen gnomAD |
|
|
CA7669136 rs756800184 |
241 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393476873 rs1300531408 |
250 | I>V | No |
ClinGen TOPMed |
|
|
rs775081813 CA7669140 |
253 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1303636417 CA393477010 |
255 | T>I | No |
ClinGen gnomAD |
|
|
CA7669141 rs749139889 |
256 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA393477034 rs1595998363 |
257 | T>P | No |
ClinGen Ensembl |
|
|
rs148170720 CA7669142 |
259 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7669143 COSM471078 rs774524839 |
263 | V>I | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs767570028 CA7669145 |
265 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393477211 rs1463579828 |
265 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1253814510 CA393477225 |
266 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA272942469 rs998705036 COSM265918 |
266 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA272942471 rs998705036 |
266 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1448582845 CA393477248 |
268 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 270 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs894088683 CA272942494 |
276 | R>C | No |
ClinGen Ensembl |
|
|
rs1435102212 CA393477439 |
276 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs573133731 CA7669149 |
279 | H>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA7669148 rs766937527 |
279 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1396138438 CA393477601 |
283 | V>I | No |
ClinGen gnomAD |
|
|
CA272942526 rs147239054 |
285 | S>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1241151033 CA393477740 |
290 | P>S | No |
ClinGen gnomAD |
|
|
rs1327196935 CA393477842 |
294 | A>T | No |
ClinGen gnomAD |
|
|
CA7669152 rs139083526 |
295 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669153 rs757031159 |
295 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA393477937 rs1187696758 |
297 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
COSM965038 rs980964644 CA272942556 |
299 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA7669156 rs745376955 |
303 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1595998465 CA393478122 |
304 | E>K | No |
ClinGen Ensembl |
|
|
CA7669157 rs780062680 COSM304649 |
306 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed |
|
CA393478237 rs1471980020 |
308 | R>Q | No |
ClinGen gnomAD |
|
|
rs749223606 CA7669158 |
308 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs372227567 CA7669160 |
311 | I>F | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1456112598 CA393478318 |
311 | I>S | No |
ClinGen gnomAD |
|
|
rs772283125 CA7669162 |
315 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 315 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393478514 rs1326790094 |
317 | M>V | No |
ClinGen gnomAD |
|
|
CA393478547 rs1595998484 |
318 | T>P | No |
ClinGen Ensembl |
|
|
rs1390568302 CA393478594 |
319 | S>N | No |
ClinGen gnomAD |
|
|
rs1349728323 CA393478643 |
321 | P>T | No |
ClinGen gnomAD |
|
|
CA393478694 rs1463151475 |
323 | L>R | No |
ClinGen gnomAD |
|
|
CA7669164 rs375208796 |
325 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA393478749 rs1402879811 |
326 | Y>H | No |
ClinGen TOPMed |
|
|
rs1242918081 CA393478774 |
327 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1242918081 CA393478778 |
327 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs777169497 CA7669166 |
333 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA393478964 rs1272930333 |
334 | S>G | No |
ClinGen gnomAD |
|
|
rs765623933 CA7669168 |
336 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393479072 rs369680927 CA7669171 |
338 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669170 rs761493110 |
338 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs773192088 CA272942621 |
338 | D>V | No |
ClinGen Ensembl |
|
|
CA393479129 rs373107501 |
339 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1408936209 CA393479146 |
340 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 342 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393479300 rs1186433657 |
346 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs534696993 CA7669173 |
347 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs762692244 CA272942628 |
347 | R>W | No |
ClinGen TOPMed |
|
|
rs779496466 CA7669174 |
348 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA272942640 rs868111329 |
356 | A>V | No |
ClinGen Ensembl |
|
|
CA7669180 rs777946764 |
367 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs990745856 CA272942676 |
368 | H>Q | No |
ClinGen Ensembl |
|
|
rs1312282888 CA393479991 |
374 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1038368899 CA272942678 |
375 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA393480015 rs1327314751 |
375 | E>K | No |
ClinGen gnomAD |
|
|
CA7669182 rs574554026 |
376 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA393480044 rs574554026 |
376 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 377 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393480084 rs1341858283 |
377 | R>G | No |
ClinGen gnomAD |
|
|
rs776636744 CA7669183 |
377 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA393480113 rs150854461 CA7669186 |
378 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150854461 CA7669185 |
378 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1429978805 CA393480222 |
383 | A>S | No |
ClinGen gnomAD |
|
|
CA393480235 rs1186243664 |
383 | A>V | No |
ClinGen gnomAD |
|
|
CA7669187 rs763434424 |
387 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1175453098 CA393480356 |
388 | M>V | No |
ClinGen gnomAD |
|
|
CA7669189 rs750085248 |
390 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1302396137 CA393480475 |
391 | S>G | No |
ClinGen gnomAD |
|
|
rs1441013363 CA393480488 |
391 | S>I | No |
ClinGen TOPMed |
|
|
CA393480518 rs1595998587 |
392 | V>A | No |
ClinGen Ensembl |
|
|
CA7669191 rs765854890 |
392 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393480635 rs1463440797 |
399 | A>T | No |
ClinGen gnomAD |
|
|
CA7669192 rs753290847 |
399 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs935427015 CA272942752 |
404 | R>C | No |
ClinGen gnomAD |
|
|
CA7669194 rs375078411 |
404 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669195 rs375078411 |
404 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777615395 CA7669197 |
406 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA7669198 rs747246404 |
407 | V>M | No |
ClinGen ExAC gnomAD |
|
| rs1382007793 | 409 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs564613054 CA7669200 |
409 | G>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs745967075 CA7669201 |
411 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669202 rs377018502 |
411 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs202134640 CA7669204 |
413 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA393481023 rs1432573726 |
415 | Q>* | No |
ClinGen gnomAD |
|
|
rs1376701769 CA393481025 |
415 | Q>L | No |
ClinGen gnomAD |
|
|
CA7669205 rs570314174 |
417 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1318804330 CA393481085 |
418 | G>S | No |
ClinGen TOPMed |
|
|
CA7669206 rs774591442 |
419 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1414669519 CA393481121 |
420 | A>G | No |
ClinGen TOPMed |
|
|
CA393481153 rs1165460339 |
421 | F>L | No |
ClinGen TOPMed |
|
|
CA7669208 rs765977253 |
422 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA272942840 rs1022688025 |
423 | A>V | No |
ClinGen TOPMed |
|
|
rs1441913589 CA393481241 |
426 | H>Y | No |
ClinGen gnomAD |
|
|
rs1295717616 CA393481334 |
430 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 431 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776154782 CA393481406 |
432 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA7669211 rs776154782 |
432 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776154782 CA393481411 |
432 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149725521 CA7669213 |
433 | P>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144583212 CA393481432 |
433 | P>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144583212 CA7669215 |
433 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144583212 CA7669214 |
433 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149725521 CA393481414 |
433 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA7669212 rs149725521 |
433 | P>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| rs747082791 | 435 | C>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1244805454 CA393481576 |
439 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 439 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA393481600 rs1214636471 |
440 | N>K | No |
ClinGen TOPMed |
|
|
rs751319113 CA7669217 |
440 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1451636892 CA393481616 |
441 | S>N | No |
ClinGen TOPMed |
|
|
CA393481654 rs1177735584 |
443 | I>V | No |
ClinGen gnomAD |
|
|
rs757462528 CA7669218 |
446 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA7669220 rs746150677 |
448 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139396216 CA7669221 |
448 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs780338453 CA7669222 |
449 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA7669223 rs749753791 |
450 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1362778122 CA393481797 |
451 | E>A | No |
ClinGen TOPMed |
|
|
rs769289489 CA7669224 |
454 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs774735984 CA393481900 |
455 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1015086590 CA272942935 |
456 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA7669226 rs748481488 |
456 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1287212568 CA393482025 |
461 | P>L | No |
ClinGen gnomAD |
|
|
CA393482024 rs1285211850 |
461 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA272942955 rs200809372 |
462 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA393482147 rs1229710365 |
468 | M>I | No |
ClinGen gnomAD |
|
|
rs772534733 CA7669227 |
468 | M>L | No |
ClinGen ExAC |
|
|
rs1482068543 CA393482297 |
479 | L>F | No |
ClinGen gnomAD |
|
|
CA7669231 rs764717244 |
480 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA393482384 rs1475545470 |
483 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1475545470 CA393482383 |
483 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs774999004 CA7669232 |
486 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs763972719 CA7669234 |
487 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA7669235 rs763972719 |
487 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA393482462 rs1423456817 |
487 | H>Y | No |
ClinGen gnomAD |
|
|
rs1566967951 CA393483059 |
491 | G>A | No |
ClinGen Ensembl |
|
|
rs767385255 CA7669237 |
491 | G>R | No |
ClinGen ExAC gnomAD |
|
|
COSM303266 rs760937042 CA7669258 |
492 | A>T | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA393483082 rs1166781223 |
493 | F>V | No |
ClinGen TOPMed |
|
|
rs144164710 CA7669260 |
494 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1187093316 CA393483127 |
495 | K>R | No |
ClinGen TOPMed |
|
|
CA7669262 rs779111603 |
501 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA7669263 rs146422729 |
501 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140843780 CA7669264 |
503 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1464803235 CA393483298 |
505 | E>K | No |
ClinGen TOPMed |
|
|
rs1400722136 CA393483326 |
507 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA7669266 rs375687634 |
507 | R>H | Variant assessed as Somatic; 4.628e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA272946650 rs375687634 |
507 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142089609 CA7669267 |
508 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779660626 CA7669268 |
509 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA272946661 rs896825447 |
510 | Q>R | No |
ClinGen Ensembl |
|
|
CA7669270 rs768048157 |
512 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1274128346 CA393483433 |
513 | A>T | No |
ClinGen gnomAD |
|
|
CA7669273 rs772077671 |
515 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393483505 rs1394638182 |
517 | R>C | No |
ClinGen TOPMed |
|
|
rs1270089517 CA393483519 |
518 | R>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 519 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM965043 rs1327418745 CA393483550 |
519 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA7669274 COSM363735 rs773090905 |
521 | R>C | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA393483585 rs1268551268 |
521 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA7669276 rs140532329 |
522 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA7669275 rs140532329 |
522 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1375025433 CA393483625 |
524 | G>D | No |
ClinGen TOPMed |
|
|
rs759856909 CA7669278 |
526 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393483660 rs1596000279 |
526 | A>V | No |
ClinGen Ensembl |
|
|
CA393483664 rs1348914858 |
527 | L>V | No |
ClinGen gnomAD |
|
|
CA393483693 rs1409099176 |
529 | A>S | No |
ClinGen gnomAD |
|
|
CA7669279 rs765168999 |
529 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA7669281 rs758795346 |
530 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA393483761 rs1409269448 |
533 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA7669282 rs140542401 |
536 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA272946766 rs151284301 |
536 | Q>R | No |
ClinGen 1000Genomes |
|
|
rs138286330 CA7669283 |
537 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs757588322 CA7669284 |
537 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393483851 rs1411576506 |
538 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs371398105 CA272946789 |
538 | R>H | No |
ClinGen ESP TOPMed |
|
|
CA393483910 rs1228052026 |
541 | D>E | No |
ClinGen gnomAD |
|
|
CA7669286 rs748880200 |
541 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA7669287 rs146914502 |
542 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1208494436 CA393483962 |
544 | H>Q | No |
ClinGen gnomAD |
|
|
rs1358908146 CA393483952 |
544 | H>Y | No |
ClinGen gnomAD |
|
|
rs1305081234 CA393483978 |
545 | M>I | No |
ClinGen TOPMed |
|
|
rs368062911 CA7669288 |
545 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747715743 CA7669289 |
547 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA7669290 rs771531183 |
548 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs1566968037 CA393484025 |
548 | N>I | No |
ClinGen Ensembl |
|
|
CA7669292 rs747006284 |
551 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747006284 CA7669293 |
551 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA393484055 COSM258963 rs1023883471 |
551 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA272946823 rs1023883471 |
551 | R>L | No |
ClinGen gnomAD |
|
|
CA393484099 rs756806594 |
554 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs765530961 CA7669296 |
555 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775387087 CA7669297 |
556 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs763070151 CA7669298 |
557 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200998546 COSM1374631 CA7669301 |
559 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA7669299 rs764200361 |
559 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA393484175 rs1313521978 |
561 | G>D | No |
ClinGen gnomAD |
|
|
CA393484220 rs1195582869 |
565 | E>G | No |
ClinGen TOPMed |
|
|
CA393484215 rs1356825476 |
565 | E>K | No |
ClinGen gnomAD |
|
|
CA393484239 rs1477299966 |
567 | T>P | No |
ClinGen TOPMed |
|
|
rs750829627 CA7669303 |
569 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754536439 CA7669304 |
569 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs750829627 CA272946865 |
569 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1203996056 CA393484268 |
570 | M>V | No |
ClinGen TOPMed |
|
|
CA7669305 rs375706718 |
572 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA272946878 rs1031022019 |
574 | L>H | No |
ClinGen TOPMed |
|
|
rs1031022019 CA393484329 |
574 | L>R | No |
ClinGen TOPMed |
No associated diseases with Q8WV41
Functions
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
| cytoplasmic vesicle membrane | The lipid bilayer surrounding a cytoplasmic vesicle. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extrinsic component of membrane | The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| identical protein binding | Binding to an identical protein or proteins. |
| phosphatidylinositol binding | Binding to an inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives. |
13 GO annotations of biological process
| Name | Definition |
|---|---|
| cleavage furrow formation | Generation of the cleavage furrow, a shallow groove in the cell surface near the old metaphase plate that marks the site of cytokinesis. This process includes the recruitment and localized activation of signals such as RhoA at the site of the future furrow to ensure that furrowing initiates at the correct site in the cell. |
| endocytosis | A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle. |
| endosomal transport | The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane. |
| endosome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes. |
| intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
| macropinocytosis | An endocytosis process that results in the uptake of liquid material by cells from their external environment by the 'ruffling' of the cell membrane to form heterogeneously sized intracellular vesicles called macropinosomes, which can be up to 5 micrometers in size. |
| mitotic cytokinesis | A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells. |
| negative regulation of endocytosis | Any process that stops, prevents, or reduces the frequency, rate or extent of endocytosis. |
| negative regulation of protein localization to cell surface | Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to the cell surface. |
| plasma membrane tubulation | A membrane tubulation process occurring in a plasma membrane. |
| positive regulation of membrane protein ectodomain proteolysis | Any process that activates or increases the frequency, rate or extent of membrane protein ectodomain peptidolysis. |
| positive regulation of protein localization to cell surface | Any process that activates or increases the frequency, rate or extent of protein localization to the cell surface. |
| protein import | The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9Y5X1 | SNX9 | Sorting nexin-9 | Homo sapiens (Human) | PR |
| Q96RF0 | SNX18 | Sorting nexin-18 | Homo sapiens (Human) | PR |
| Q91ZR2 | Snx18 | Sorting nexin-18 | Mus musculus (Mouse) | PR |
| Q91VH2 | Snx9 | Sorting nexin-9 | Mus musculus (Mouse) | PR |
| Q28GP7 | snx33 | Sorting nexin-33 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALKGRALYD | FHSENKEEIS | IQQDEDLVIF | SETSLDGWLQ | GQNSRGETGL | FPASYVEIVR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SGISTNHADY | SSSPAGSPGA | QVSLYNSPSV | ASPARSGGGS | GFLSNQGSFE | EDDDDDWDDW |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DDGCTVVEEP | RAGGLGTNGH | PPLNLSYPGA | YPSQHMAFRP | KPPLERQDSL | ASAKRGSVVG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RNLNRFSCFV | RSGVEAFILG | DVPMMAKIAE | TYSIEMGPRG | PQWKANPHPF | ACSVEDPTKQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TKFKGIKSYI | SYKLTPTHAA | SPVYRRYKHF | DWLYNRLLHK | FTVISVPHLP | EKQATGRFEE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DFIEKRKRRL | ILWMDHMTSH | PVLSQYEGFQ | HFLSCLDDKQ | WKMGKRRAEK | DEMVGASFLL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TFQIPTEHQD | LQDVEDRVDT | FKAFSKKMDD | SVLQLSTVAS | ELVRKHVGGF | RKEFQKLGSA |
| 430 | 440 | 450 | 460 | 470 | 480 |
| FQAISHSFQM | DPPFCSEALN | SAISHTGRTY | EAIGEMFAEQ | PKNDLFQMLD | TLSLYQGLLS |
| 490 | 500 | 510 | 520 | 530 | 540 |
| NFPDIIHLQK | GAFAKVKESQ | RMSDEGRMVQ | DEADGIRRRC | RVVGFALQAE | MNHFHQRREL |
| 550 | 560 | 570 | |||
| DFKHMMQNYL | RQQILFYQRV | GQQLEKTLRM | YDNL |