Q8N884
Gene name |
CGAS |
Protein name |
Cyclic GMP-AMP synthase |
Names |
cGAMP synthase, cGAS, h-cGAS, 2'3'-cGAMP synthase, Mab-21 domain-containing protein 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:115004 |
EC number |
2.7.7.86: Nucleotidyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
95 structures for Q8N884
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4KM5 | X-ray | 250 A | A | 157-522 | PDB |
| 4LEV | X-ray | 195 A | A/B | 157-522 | PDB |
| 4LEW | X-ray | 204 A | A/B | 157-522 | PDB |
| 4MKP | X-ray | 195 A | A | 161-522 | PDB |
| 4O67 | X-ray | 244 A | A/B | 161-522 | PDB |
| 4O68 | X-ray | 244 A | A | 147-522 | PDB |
| 4O69 | X-ray | 225 A | A | 161-522 | PDB |
| 5V8O | X-ray | 310 A | A/B | 161-522 | PDB |
| 5VDO | X-ray | 322 A | A/B | 161-522 | PDB |
| 5VDP | X-ray | 230 A | A/B | 161-522 | PDB |
| 5VDQ | X-ray | 325 A | A/B | 161-522 | PDB |
| 5VDR | X-ray | 304 A | A/B | 161-522 | PDB |
| 5VDS | X-ray | 277 A | A/B | 161-522 | PDB |
| 5VDT | X-ray | 258 A | A/B | 161-522 | PDB |
| 5VDU | X-ray | 273 A | A/B | 161-522 | PDB |
| 5VDV | X-ray | 300 A | A/B | 161-522 | PDB |
| 5VDW | X-ray | 271 A | A/B | 161-522 | PDB |
| 6CT9 | X-ray | 226 A | A | 157-522 | PDB |
| 6CTA | X-ray | 278 A | A | 157-522 | PDB |
| 6EDB | X-ray | 321 A | A/B | 157-522 | PDB |
| 6EDC | X-ray | 271 A | A | 157-522 | PDB |
| 6LRC | X-ray | 183 A | A/B | 157-522 | PDB |
| 6LRE | X-ray | 265 A | A/B | 157-522 | PDB |
| 6LRI | X-ray | 250 A | A/B | 157-522 | PDB |
| 6LRJ | X-ray | 300 A | A/B | 157-522 | PDB |
| 6LRK | X-ray | 225 A | A/B | 157-522 | PDB |
| 6LRL | X-ray | 265 A | A/B | 157-522 | PDB |
| 6MJU | X-ray | 245 A | A | 152-522 | PDB |
| 6MJW | X-ray | 240 A | A | 152-522 | PDB |
| 6MJX | X-ray | 260 A | A | 152-522 | PDB |
| 6NAO | X-ray | 323 A | A/B | 161-522 | PDB |
| 6NFG | X-ray | 276 A | A/B | 161-522 | PDB |
| 6NFO | X-ray | 293 A | A/B | 161-522 | PDB |
| 6O47 | X-ray | 220 A | A | 152-522 | PDB |
| 6Y5D | EM | 410 A | K/L | 161-522 | PDB |
| 6Y5E | EM | 315 A | K | 161-522 | PDB |
| 7C0M | EM | 390 A | K/k | 151-522 | PDB |
| 7CCQ | EM | 380 A | K | 157-522 | PDB |
| 7CCR | EM | 490 A | K/V | 157-522 | PDB |
| 7FTF | X-ray | 151 A | A | 161-522 | PDB |
| 7FTG | X-ray | 173 A | A/B | 161-522 | PDB |
| 7FTH | X-ray | 255 A | A | 161-522 | PDB |
| 7FTI | X-ray | 200 A | A | 161-522 | PDB |
| 7FTJ | X-ray | 146 A | A | 161-522 | PDB |
| 7FTK | X-ray | 212 A | A/B | 161-522 | PDB |
| 7FTL | X-ray | 220 A | A | 161-522 | PDB |
| 7FTM | X-ray | 170 A | A | 161-522 | PDB |
| 7FTN | X-ray | 200 A | A | 161-522 | PDB |
| 7FTO | X-ray | 240 A | A | 161-522 | PDB |
| 7FTP | X-ray | 248 A | A | 161-522 | PDB |
| 7FTQ | X-ray | 208 A | A | 161-522 | PDB |
| 7FTR | X-ray | 164 A | A | 161-522 | PDB |
| 7FTS | X-ray | 221 A | A | 161-522 | PDB |
| 7FTT | X-ray | 223 A | A/B | 161-522 | PDB |
| 7FTU | X-ray | 165 A | A | 161-522 | PDB |
| 7FTV | X-ray | 188 A | A | 161-522 | PDB |
| 7FTW | X-ray | 221 A | A | 161-522 | PDB |
| 7FTX | X-ray | 283 A | A | 161-522 | PDB |
| 7FTY | X-ray | 230 A | A | 161-522 | PDB |
| 7FTZ | X-ray | 250 A | A/B | 161-522 | PDB |
| 7FU0 | X-ray | 197 A | A | 161-522 | PDB |
| 7FU1 | X-ray | 207 A | A | 161-522 | PDB |
| 7FU2 | X-ray | 230 A | A | 161-522 | PDB |
| 7FU3 | X-ray | 182 A | A | 161-522 | PDB |
| 7FU4 | X-ray | 193 A | A | 161-522 | PDB |
| 7FU5 | X-ray | 218 A | A/B | 161-522 | PDB |
| 7FU6 | X-ray | 237 A | A | 161-522 | PDB |
| 7FU7 | X-ray | 224 A | A | 161-522 | PDB |
| 7FU8 | X-ray | 172 A | A | 161-522 | PDB |
| 7FU9 | X-ray | 167 A | A | 161-522 | PDB |
| 7FUA | X-ray | 144 A | A | 161-522 | PDB |
| 7FUB | X-ray | 198 A | A | 161-522 | PDB |
| 7FUC | X-ray | 252 A | A | 161-522 | PDB |
| 7FUD | X-ray | 203 A | A/B | 161-522 | PDB |
| 7FUE | X-ray | 217 A | A | 161-522 | PDB |
| 7FUF | X-ray | 192 A | A | 161-522 | PDB |
| 7FUG | X-ray | 211 A | A/B | 161-522 | PDB |
| 7FUH | X-ray | 194 A | A | 161-522 | PDB |
| 7FUI | X-ray | 174 A | A | 161-522 | PDB |
| 7FUJ | X-ray | 179 A | A | 161-522 | PDB |
| 7FUK | X-ray | 161 A | A | 161-522 | PDB |
| 7FUL | X-ray | 230 A | A | 161-522 | PDB |
| 7FUM | X-ray | 206 A | A | 161-522 | PDB |
| 7FUN | X-ray | 207 A | A | 161-522 | PDB |
| 7FUO | X-ray | 181 A | A | 161-522 | PDB |
| 7FUP | X-ray | 241 A | A | 161-522 | PDB |
| 7FUQ | X-ray | 176 A | A | 161-522 | PDB |
| 7FUR | X-ray | 170 A | A | 161-522 | PDB |
| 8IME | X-ray | 263 A | A/B | 157-522 | PDB |
| 8IMF | X-ray | 240 A | A/B | 157-522 | PDB |
| 8IMG | X-ray | 180 A | A/B | 157-522 | PDB |
| 8OKX | EM | 351 A | A | 156-522 | PDB |
| 8OL1 | EM | 350 A | K | 161-522 | PDB |
| 8WR8 | X-ray | 310 A | A/B | 161-522 | PDB |
| AF-Q8N884-F1 | Predicted | AlphaFoldDB |
453 variants for Q8N884
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA364711663 rs774733961 |
3 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889179 rs774733961 |
3 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711665 rs1406989312 |
3 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3889178 rs770727137 |
5 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1582660495 CA364711632 |
8 | A>P | No |
ClinGen Ensembl |
|
|
CA364711621 rs1484111485 |
9 | M>I | No |
ClinGen gnomAD |
|
|
CA364711623 rs1167718559 |
9 | M>T | No |
ClinGen TOPMed |
|
|
CA3889177 rs34605178 |
9 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1255208821 CA364711613 |
10 | Q>L | No |
ClinGen gnomAD |
|
|
CA364711601 rs1306771526 |
12 | A>D | No |
ClinGen gnomAD |
|
|
CA3889176 rs777423092 |
12 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs926391717 CA140941514 |
13 | S>Y | No |
ClinGen Ensembl |
|
|
rs1405966339 CA364711593 |
14 | E>K | No |
ClinGen TOPMed |
|
|
CA3889172 rs754846031 |
15 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA364711585 rs754846031 |
15 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs751343807 CA3889171 |
16 | G>* | No |
ClinGen ExAC gnomAD |
|
|
CA364711578 rs1451941695 |
16 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs147035222 RCV000953228 CA3889170 |
17 | A>G | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1344337430 CA364711575 |
17 | A>T | No |
ClinGen gnomAD |
|
|
rs753993852 CA3889168 |
21 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1307042642 CA364711544 |
22 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA140941488 rs966509155 |
22 | A>V | No |
ClinGen TOPMed |
|
|
rs1444650325 CA364711536 |
23 | S>F | No |
ClinGen gnomAD |
|
|
CA3889166 rs760649119 |
24 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711530 rs1314022859 |
24 | A>V | No |
ClinGen gnomAD |
|
|
CA3889164 rs767939944 |
25 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767939944 CA364711527 |
25 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711528 rs767939944 |
25 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889165 rs372417314 |
25 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774867546 CA364711512 |
28 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774867546 CA3889162 |
28 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711503 rs1245895147 |
29 | G>D | No |
ClinGen gnomAD |
|
|
CA364711504 rs1290150050 |
29 | G>S | No |
ClinGen gnomAD |
|
|
rs1314973747 CA364711499 |
30 | A>P | No |
ClinGen gnomAD |
|
|
CA364711495 rs1380722770 |
30 | A>V | No |
ClinGen gnomAD |
|
|
CA364711490 rs1361576360 |
31 | P>Q | No |
ClinGen gnomAD |
|
|
CA3889160 rs762757889 |
32 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA3889159 rs772990516 |
33 | D>V | No |
ClinGen ExAC |
|
|
CA3889158 rs769481836 |
34 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1192658709 CA364711467 |
35 | T>A | No |
ClinGen TOPMed |
|
|
rs9352000 CA3889156 VAR_050811 |
35 | T>N | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3889157 rs9352000 |
35 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364711462 rs1369636757 |
36 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA364711457 rs1561933242 |
36 | E>D | No |
ClinGen Ensembl |
|
|
rs1369636757 CA364711464 |
36 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA364711453 rs746906830 |
37 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889154 rs746906830 |
37 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779830325 CA364711451 |
38 | P>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs758174938 CA3889152 |
38 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs779830325 CA3889153 |
38 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA3889150 rs777938732 |
39 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756318362 CA3889149 |
40 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1357735901 CA364711433 |
41 | P>L | No |
ClinGen gnomAD |
|
|
rs1357735901 CA364711434 |
41 | P>R | No |
ClinGen gnomAD |
|
|
CA3889147 rs767573211 |
41 | P>S | No |
ClinGen ExAC TOPMed |
|
|
CA140941362 rs901219481 |
42 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA364711432 rs901219481 |
42 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA364711431 rs901219481 |
42 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs752104616 CA3889145 |
43 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889146 rs755440893 |
43 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752104616 CA364711422 |
43 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711400 rs1561933207 |
47 | K>R | No |
ClinGen Ensembl |
|
|
CA3889143 rs35629782 |
48 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3889144 rs766912294 |
48 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1448918635 CA364711389 |
49 | G>E | No |
ClinGen TOPMed |
|
|
rs761478616 CA3889140 CA3889141 |
50 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA140941291 rs1048612855 |
53 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1048612855 CA140941289 |
53 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3889139 rs769976348 |
54 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769976348 CA364711362 |
54 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889138 rs768147921 |
55 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA364711354 rs1172325497 |
55 | R>M | No |
ClinGen gnomAD |
|
|
CA364711352 rs34985291 |
55 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA140941266 rs539927816 |
56 | K>N | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1452688603 CA364711329 |
59 | S>Y | No |
ClinGen gnomAD |
|
|
rs1194601988 CA364711326 |
60 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA140941257 rs943315453 |
62 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
rs572861541 CA3889135 |
63 | K>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1200706493 CA364711293 |
64 | S>R | No |
ClinGen gnomAD |
|
|
CA364711289 rs1582660295 |
65 | A>S | No |
ClinGen Ensembl |
|
|
CA140941247 rs370645038 |
66 | P>R | No |
ClinGen gnomAD |
|
|
CA364711283 rs1282360336 |
66 | P>S | No |
ClinGen gnomAD |
|
|
rs1561933159 CA364711268 |
68 | T>S | No |
ClinGen Ensembl |
|
|
rs1390782804 CA364711261 |
69 | Q>L | No |
ClinGen gnomAD |
|
|
rs913614476 CA140941219 |
70 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA364711247 rs1400336397 |
71 | R>M | No |
ClinGen gnomAD |
|
| TCGA novel | 72 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364711234 rs1467874488 |
73 | P>R | No |
ClinGen gnomAD |
|
|
rs1332853713 CA364711236 |
73 | P>S | No |
ClinGen gnomAD |
|
|
rs375723811 CA140941175 |
74 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs375723811 CA140941177 |
74 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1478528698 CA364711228 |
75 | R>C | No |
ClinGen gnomAD |
|
|
CA364711220 rs1291310244 |
76 | A>G | No |
ClinGen TOPMed |
|
|
rs987846250 CA364711222 |
76 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs987846250 CA140941169 |
76 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs987846250 CA140941173 |
76 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1419025132 CA364711217 |
77 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs980310855 CA364711215 |
77 | T>N | No |
ClinGen TOPMed |
|
|
rs1419025132 CA364711218 |
77 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs980310855 CA140941150 |
77 | T>S | No |
ClinGen TOPMed |
|
|
CA364711199 rs1460144649 |
80 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA140941149 rs866696488 |
80 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA364711197 rs866696488 |
80 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1460144649 CA364711201 |
80 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA364711196 rs200213844 |
81 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3889131 rs200213844 |
81 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 81 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1346816677 CA364711189 |
82 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs748331365 CA3889130 |
82 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711173 rs1377613168 |
84 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA364711171 rs1377613168 |
84 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA140941132 rs953388880 |
86 | Q>* | No |
ClinGen gnomAD |
|
|
CA3889127 rs752163963 |
86 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364711154 rs1415849924 |
87 | R>P | No |
ClinGen gnomAD |
|
|
rs1024891888 CA140941124 |
88 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA364711152 rs1024891888 |
88 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
RCV000709898 rs749545076 |
89 | Q>missing | No |
ClinVar dbSNP |
|
|
CA364711142 rs1304962186 |
89 | Q>R | No |
ClinGen TOPMed |
|
|
CA3889124 rs758938193 |
93 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs758938193 CA364711117 |
93 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1026365134 CA140941119 |
94 | S>F | No |
ClinGen TOPMed |
|
|
CA364711107 rs1407535069 |
95 | D>N | No |
ClinGen Ensembl |
|
|
rs750841042 CA3889123 |
97 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889122 rs141133909 |
101 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364711064 rs1259366551 |
101 | G>V | No |
ClinGen gnomAD |
|
|
CA140941098 rs943276786 |
102 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA364711055 rs776344260 |
103 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA3889120 rs776344260 |
103 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA364711051 rs1358053788 |
104 | G>R | No |
ClinGen gnomAD |
|
|
CA140941048 rs1015622683 |
106 | E>K | No |
ClinGen TOPMed |
|
|
rs200136243 CA3889118 |
107 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA364711028 rs769416693 |
108 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889117 rs769416693 |
108 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889116 rs774941526 |
109 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1423321373 CA364711011 |
111 | R>W | No |
ClinGen gnomAD |
|
|
rs866098353 CA140941036 |
112 | E>Q | No |
ClinGen Ensembl |
|
|
rs1188740658 CA364711003 |
112 | E>V | No |
ClinGen TOPMed |
|
|
rs1163950892 CA364710995 |
113 | P>L | No |
ClinGen gnomAD |
|
|
rs1447658649 CA364710986 |
115 | L>F | No |
ClinGen TOPMed |
|
|
rs1582660138 CA364710982 |
116 | S>A | No |
ClinGen Ensembl |
|
|
rs772019128 CA3889115 |
116 | S>F | No |
ClinGen ExAC |
|
|
CA3889114 rs745744660 |
117 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3889113 rs774017782 |
117 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA364710969 rs1220094691 |
118 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1265107098 CA364710972 |
118 | A>T | No |
ClinGen gnomAD |
|
|
CA364710963 rs1225685356 |
119 | G>A | No |
ClinGen TOPMed |
|
|
rs545433028 CA364710966 |
119 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs545433028 CA140941006 |
119 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1225685356 CA364710962 |
119 | G>V | No |
ClinGen TOPMed |
|
|
CA364710950 rs1289928785 |
121 | C>Y | No |
ClinGen gnomAD |
|
|
COSM4161347 rs1337026332 CA364710945 |
122 | R>C | thyroid [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs770753111 CA3889112 |
122 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748373505 CA3889111 |
123 | Q>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 123 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781457078 CA3889110 |
124 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs755056462 CA3889109 |
125 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755056462 CA364710925 |
125 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349878419 CA364710920 |
126 | A>E | No |
ClinGen gnomAD |
|
|
rs1403605966 CA364710924 |
126 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA364710907 rs1324272884 |
128 | C>F | No |
ClinGen gnomAD |
|
|
CA3889108 rs552671009 |
129 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1407101416 CA364710902 |
129 | S>P | No |
ClinGen gnomAD |
|
|
CA364710903 rs1407101416 |
129 | S>T | No |
ClinGen gnomAD |
|
|
rs1414049930 CA364710896 |
130 | T>K | No |
ClinGen TOPMed |
|
|
CA3889107 rs527795978 |
132 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 133 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA140940938 rs1003713332 |
133 | R>S | No |
ClinGen Ensembl |
|
|
CA364710878 rs1168016799 |
133 | R>T | No |
ClinGen TOPMed |
|
|
CA364710869 rs1478282750 |
134 | P>L | No |
ClinGen gnomAD |
|
|
CA3889104 rs1554146180 |
135 | P>A | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA364710866 rs1403918612 |
135 | P>Q | No |
ClinGen TOPMed |
|
|
rs1477651842 CA364710863 |
136 | P>A | No |
ClinGen gnomAD |
|
|
rs757628777 CA3889102 |
137 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1247278348 CA364710855 |
137 | G>R | No |
ClinGen gnomAD |
|
|
rs757628777 CA3889101 |
137 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753472477 CA3889100 |
138 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs763836802 CA3889099 |
139 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA364710847 rs763836802 |
139 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA364710834 rs1319608405 |
140 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs760271451 CA3889098 |
142 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1319229471 CA364710817 |
143 | S>N | No |
ClinGen TOPMed |
|
|
rs926274545 CA140940903 |
144 | P>L | No |
ClinGen TOPMed |
|
|
CA140940904 rs113374767 |
144 | P>S | No |
ClinGen gnomAD |
|
|
CA364710806 rs1330820242 |
145 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA364710809 rs373045600 |
145 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3889095 rs373045600 |
145 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3889093 rs770677150 |
146 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs770677150 CA3889094 |
146 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA3889090 rs747174108 |
147 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889089 rs747174108 |
147 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772844829 CA3889091 |
147 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 150 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772276292 CA3889087 |
151 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889085 rs779442760 |
152 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364710769 rs1561932931 |
153 | L>F | No |
ClinGen Ensembl |
|
|
rs754251787 CA3889083 |
155 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364710756 rs1451835720 |
155 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs755764815 CA3889081 |
156 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs752337338 CA3889080 |
156 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 157 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767069356 CA3889079 |
158 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1371855931 CA364710735 |
159 | A>T | No |
ClinGen gnomAD |
|
|
CA140940834 rs1052171026 |
160 | P>S | No |
ClinGen Ensembl |
|
|
rs751494908 CA3889077 |
161 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA364710719 rs1378402145 |
162 | A>T | No |
ClinGen gnomAD |
|
|
CA364710709 rs1370319039 |
163 | S>W | No |
ClinGen TOPMed |
|
|
rs754837044 CA140940827 |
165 | L>P | No |
ClinGen Ensembl |
|
|
CA3889076 rs370001875 |
166 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364710693 rs556099079 |
166 | R>W | No |
ClinGen TOPMed |
|
|
CA364710689 rs141016543 |
167 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889074 rs150220319 |
167 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889075 rs150220319 |
167 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3889073 rs141016543 |
167 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364710677 rs1379678806 |
169 | L>S | No |
ClinGen TOPMed gnomAD |
|
|
CA364710679 rs1379678806 |
169 | L>W | No |
ClinGen TOPMed gnomAD |
|
|
CA3889072 rs761045584 |
171 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs775843385 CA3889071 |
171 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3889069 rs745990535 |
174 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA364710641 rs1478946136 |
174 | L>P | No |
ClinGen TOPMed |
|
|
CA3889068 rs774244760 |
177 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1191871186 CA364710608 |
179 | I>S | No |
ClinGen TOPMed |
|
|
rs985758497 CA140940775 |
179 | I>V | No |
ClinGen Ensembl |
|
|
CA3889066 rs373171892 |
181 | T>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1582659898 CA364710562 |
186 | V>G | No |
ClinGen Ensembl |
|
|
rs1160737827 CA364710565 |
186 | V>L | No |
ClinGen TOPMed |
|
|
rs778174215 CA364710553 |
188 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3889064 rs369665603 |
188 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778174215 CA3889065 |
188 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs1582659888 CA364710544 |
189 | V>G | No |
ClinGen Ensembl |
|
|
CA364710531 rs1561932857 |
191 | D>E | No |
ClinGen Ensembl |
|
|
CA3889063 rs747844982 |
192 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1304355753 CA364710500 |
196 | R>S | No |
ClinGen gnomAD |
|
|
CA3889060 rs751105985 |
197 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs372917212 CA3889058 |
198 | K>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs750324744 CA364710487 |
199 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs750324744 CA3889057 |
199 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA3889056 rs765184085 |
199 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1582659862 CA364710481 |
200 | D>N | No |
ClinGen Ensembl |
|
|
CA3889055 rs761679403 |
201 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA140940684 rs761679403 |
201 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA140940686 rs761679403 |
201 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1415579925 CA364710469 |
202 | A>S | No |
ClinGen gnomAD |
|
|
rs1311066436 CA364710463 |
203 | F>V | No |
ClinGen TOPMed |
|
|
rs1353936037 CA364710457 |
204 | R>G | No |
ClinGen TOPMed |
|
|
rs776525430 CA3889054 |
204 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA140940652 rs952772345 |
206 | V>A | No |
ClinGen TOPMed |
|
|
CA3889052 rs759618920 |
206 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA3889050 rs369422354 CA364710411 |
212 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1453270785 CA364710404 |
213 | S>R | No |
ClinGen TOPMed |
|
|
CA364710394 rs1345101857 |
214 | Y>C | No |
ClinGen gnomAD |
|
|
CA140940618 rs936422794 |
215 | Y>H | No |
ClinGen TOPMed |
|
|
CA3889047 rs773683850 |
217 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364710364 rs1298634797 |
218 | V>A | No |
ClinGen gnomAD |
|
|
rs375046828 CA3889046 |
218 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs926410228 CA140940607 |
219 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA3889025 rs549985083 |
222 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1033054939 CA140934462 |
223 | P>A | No |
ClinGen Ensembl |
|
|
CA364709495 rs1325265402 |
225 | E>V | No |
ClinGen TOPMed |
|
|
CA364709466 rs1424582665 |
227 | D>V | No |
ClinGen Ensembl |
|
|
CA364709468 rs1451822934 |
227 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1371821155 CA364709432 |
229 | M>I | No |
ClinGen gnomAD |
|
|
CA364709416 rs1200759497 |
230 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1342559470 CA364709388 |
232 | L>Q | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 236 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145259959 CA3889022 |
239 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3889021 rs778507101 |
241 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757263892 CA3889020 |
241 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs753822606 CA140934373 |
244 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369172604 CA3889018 |
246 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3889017 rs755839580 |
246 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751844640 CA3889016 |
247 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA3889015 rs766538455 |
248 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs763188406 CA3889014 |
249 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs750518997 CA3889013 |
250 | F>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 256 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3889012 rs186630766 |
257 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364709050 rs1258767367 |
257 | P>T | No |
ClinGen gnomAD |
|
|
rs610913 CA3889007 VAR_033677 |
261 | P>H | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs610913 CA3889008 |
261 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1440957546 CA364708988 |
261 | P>T | No |
ClinGen gnomAD |
|
|
rs771633800 CA3889005 |
264 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1158421245 CA364708892 |
267 | E>D | No |
ClinGen TOPMed |
|
|
rs371707799 CA3889004 |
267 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770551313 CA3889002 |
268 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs778631758 CA3889003 |
268 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA364708871 rs1340916064 |
269 | E>G | No |
ClinGen gnomAD |
|
|
rs1333911244 CA364708828 |
272 | S>P | No |
ClinGen gnomAD |
|
|
rs1403006912 CA364708791 |
275 | K>* | No |
ClinGen TOPMed |
|
|
rs1377654649 CA364708731 |
279 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs780985384 CA3888997 |
280 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA3888996 rs758627851 |
281 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1347065196 CA364708703 |
281 | R>K | No |
ClinGen TOPMed |
|
|
rs750643153 CA3888994 |
284 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs765362734 CA3888993 |
285 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1278779578 CA364708652 |
285 | K>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 287 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs955664376 CA140934223 |
289 | N>D | No |
ClinGen TOPMed |
|
|
CA3888990 rs764541437 |
290 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754409437 CA3888991 |
290 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1220431139 CA364708533 |
293 | D>H | No |
ClinGen TOPMed |
|
|
CA3888965 rs774812567 |
294 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3888964 rs183690204 |
294 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3888963 rs183690204 |
294 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA364707854 rs1256552652 |
295 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA3888962 rs772605312 |
297 | I>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 298 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1365945469 CA364707826 |
299 | K>E | No |
ClinGen TOPMed |
|
| VAR_085524 | 303 | G>E | found in patients with tumors; dominant mutation; reduced nucleotidyltransferase activity [UniProt] | No | UniProt |
|
CA3888961 rs78578389 |
305 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA364707762 rs1301606288 |
308 | V>A | No |
ClinGen TOPMed |
|
|
rs1186282832 CA364707748 |
311 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs748096559 CA3888960 |
311 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776612878 CA3888959 |
313 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs768480244 CA3888958 |
314 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1463209696 CA364707721 |
315 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 315 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs984054493 CA140930961 |
316 | I>M | No |
ClinGen TOPMed |
|
|
rs1398456420 CA364707710 |
316 | I>T | No |
ClinGen gnomAD |
|
|
rs1170257317 CA364707704 |
317 | S>C | No |
ClinGen gnomAD |
|
|
rs1465882305 CA364707702 |
318 | V>M | No |
ClinGen gnomAD |
|
|
CA3888956 rs779777358 |
319 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA140930956 rs368392294 |
319 | D>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs757485722 CA3888955 |
320 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs749520405 CA3888954 |
321 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1192464729 CA364707645 |
327 | K>E | No |
ClinGen TOPMed |
|
|
rs909191382 CA140930949 |
327 | K>T | No |
ClinGen Ensembl |
|
| TCGA novel | 328 | S>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1244665826 CA364707637 |
328 | S>N | No |
ClinGen TOPMed |
|
|
rs142038538 CA3888950 |
329 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs142038538 CA3888951 |
329 | S>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1562293160 CA364707623 |
330 | W>* | No |
ClinGen Ensembl |
|
|
rs375604720 CA3888947 |
336 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs781222574 CA140930943 |
336 | E>K | No |
ClinGen Ensembl |
|
|
CA3888945 rs750077245 |
339 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs190867294 CA3888944 COSM1081549 |
339 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs190867294 CA364707563 |
339 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs372107956 CA364707562 |
340 | I>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3888943 rs372107956 |
340 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA140930892 rs965574214 |
340 | I>S | No |
ClinGen TOPMed |
|
|
CA3888942 rs372107956 |
340 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364707529 rs1279343949 |
344 | L>P | No |
ClinGen TOPMed |
|
|
CA364707517 rs1443125731 |
346 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
rs143905398 CA3888941 |
347 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749518819 CA3888935 |
353 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs772235312 CA3888934 |
353 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1425856937 CA364707463 |
355 | K>R | No |
ClinGen gnomAD |
|
|
CA3888933 rs186480105 |
356 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1237057806 CA364707424 |
361 | P>A | No |
ClinGen gnomAD |
|
|
rs781362319 CA3888931 |
362 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs982007004 CA140930847 |
363 | H>D | No |
ClinGen Ensembl |
|
|
CA364707404 rs1287076884 |
364 | A>T | No |
ClinGen TOPMed |
|
|
CA140930838 rs764731227 |
367 | G>E | No |
ClinGen Ensembl |
|
|
CA140930831 rs748195437 |
368 | N>S | No |
ClinGen gnomAD |
|
|
rs1208539248 CA364707355 |
371 | Q>* | No |
ClinGen gnomAD |
|
|
CA140922830 rs200205008 |
375 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
COSM196016 CA3888917 rs531954415 |
376 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA3888918 rs149902826 |
376 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1582649217 CA364705215 |
381 | H>P | No |
ClinGen Ensembl |
|
|
CA3888912 rs73754628 |
382 | I>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3888913 rs781491185 |
382 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs750825685 CA3888907 |
383 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370272118 CA3888909 |
383 | E>K | Variant assessed as Somatic; 4.624e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3888905 rs756941004 |
386 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA364705162 rs753473978 |
389 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763640060 CA3888903 |
389 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753473978 CA3888904 |
389 | N>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3888902 rs755586918 |
390 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs970823535 CA140922684 |
391 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs146116825 CA3888900 |
393 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376147946 CA3888899 |
395 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1027932064 CA140922616 |
396 | C>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3888897 rs766081918 |
397 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA3888896 rs762186167 |
399 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs138458631 CA3888895 |
400 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs138458631 CA140922614 |
400 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1478641579 CA364705070 |
401 | E>G | No |
ClinGen TOPMed |
|
|
CA3888891 rs747116940 |
402 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1054075213 CA140922586 |
404 | C>F | No |
ClinGen Ensembl |
|
|
CA364705027 rs1430850836 |
404 | C>S | No |
ClinGen gnomAD |
|
|
CA3888869 rs746434360 |
407 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774687084 CA3888868 |
408 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs774687084 CA364704257 |
408 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs771383709 CA3888867 |
409 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA364704197 rs1306517577 |
416 | L>F | No |
ClinGen gnomAD |
|
|
CA364704199 rs1306517577 |
416 | L>I | No |
ClinGen gnomAD |
|
|
CA3888865 rs536055666 |
420 | L>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3888864 rs114473784 |
422 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1421515911 CA364704151 |
423 | R>G | No |
ClinGen TOPMed |
|
|
rs1166539932 CA364704130 |
425 | K>N | No |
ClinGen TOPMed |
|
|
CA140919620 rs919029936 |
426 | D>H | No |
ClinGen TOPMed |
|
|
CA364704128 rs919029936 |
426 | D>N | No |
ClinGen TOPMed |
|
|
CA364704107 rs1330494068 |
428 | K>N | No |
ClinGen gnomAD |
|
|
rs1393435454 CA364704098 |
429 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA364704087 rs1324457133 |
431 | D>E | No |
ClinGen gnomAD |
|
|
rs774342634 CA3888862 |
431 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs774342634 CA140919615 |
431 | D>Y | No |
ClinGen ExAC gnomAD |
|
| VAR_085525 | 432 | K>T | found in patients with uterine endometrioid carcinoma, reduced nucleotidyltransferase activity [UniProt] | No | UniProt |
|
CA364704078 rs1312755765 |
433 | F>I | No |
ClinGen TOPMed gnomAD |
|
|
COSM451777 rs141390590 CA3888861 |
433 | F>L | breast [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA3888860 rs377097470 |
436 | Y>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364704048 rs148298509 |
437 | H>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3888859 rs148298509 |
437 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1255242854 CA364704024 |
441 | A>S | No |
ClinGen gnomAD |
|
|
CA3888857 rs372631572 |
442 | F>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364704018 rs1486650584 |
442 | F>L | No |
ClinGen gnomAD |
|
|
CA140919566 rs1056714207 |
444 | H>N | No |
ClinGen Ensembl |
|
|
CA3888854 rs570427952 |
445 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3888855 rs570427952 |
445 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA364703973 rs1562289640 |
448 | Q>H | No |
ClinGen Ensembl |
|
|
rs976907040 CA140919537 |
450 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs924697459 CA140919544 |
450 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3888851 rs200818241 |
452 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3888850 rs759563628 |
454 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3888849 rs774436118 |
456 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1031745357 CA140919520 |
457 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA140919518 rs968744350 |
457 | R>L | No |
ClinGen Ensembl |
|
|
CA140919517 rs975717163 |
458 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
CA364703908 rs975717163 |
458 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA3888846 rs746885325 |
462 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1582647332 CA364703868 |
464 | F>L | No |
ClinGen Ensembl |
|
|
CA3888844 rs747885400 |
464 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1192897199 CA364703843 |
467 | C>F | No |
ClinGen gnomAD |
|
|
CA3888842 rs551846495 |
467 | C>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1192897199 CA364703844 |
467 | C>Y | No |
ClinGen gnomAD |
|
|
CA364703840 rs779657218 |
468 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3888840 rs779657218 |
468 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1467655080 CA364703780 |
472 | L>H | No |
ClinGen TOPMed |
|
|
CA3888835 rs756968288 |
474 | C>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778913574 CA3888836 |
474 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1276816495 CA364703697 |
477 | T>I | No |
ClinGen gnomAD |
|
|
rs1327079970 CA364703685 |
478 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 479 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364703608 rs1234011055 |
483 | Y>D | No |
ClinGen TOPMed |
|
|
rs138984002 CA3888834 |
483 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA140919392 rs895735379 |
485 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA3888833 rs767651417 |
486 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA364703555 rs1211647911 |
486 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA364703500 rs1462781567 |
489 | N>S | No |
ClinGen gnomAD |
|
|
CA364703505 rs1165928919 |
489 | N>Y | No |
ClinGen gnomAD |
|
|
rs766441481 CA3888830 |
493 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA364703434 rs1475721740 |
493 | S>I | No |
ClinGen gnomAD |
|
|
rs763507557 CA3888829 |
495 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs773685659 CA3888828 |
497 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
COSM3430862 rs1206488804 CA364703368 |
499 | R>I | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA364703351 rs311678 CA364703350 |
501 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1449920881 CA364703340 |
503 | F>L | No |
ClinGen TOPMed |
|
|
rs1215213174 CA364703314 |
505 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs974303140 CA140919330 |
507 | Q>* | No |
ClinGen Ensembl |
|
|
CA827927299 rs1434791944 |
509 | E>D | No |
ClinGen TOPMed |
|
|
CA140919328 rs777006094 |
509 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1429018382 CA364703218 |
511 | E>A | No |
ClinGen gnomAD |
|
|
rs768207867 CA3888824 |
512 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs529824524 CA3888822 |
514 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
No associated diseases with Q8N884
Functions
| Description | ||
|---|---|---|
| EC Number | 2.7.7.86 | Nucleotidyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| site of double-strand break | A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix. |
12 GO annotations of molecular function
| Name | Definition |
|---|---|
| 2',3'-cyclic GMP-AMP synthase activity | Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(2'-5')A-P(3'-5') (cyclic 2',3' GAMP). |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| double-stranded DNA binding | Binding to double-stranded DNA. |
| GTP binding | Binding to GTP, guanosine triphosphate. |
| metal ion binding | Binding to a metal ion. |
| molecular condensate scaffold activity | Binding and bringing together two or more macromolecules in contact, permitting those molecules to organize as a molecular condensate. |
| nucleosome binding | Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. |
| phosphatidylinositol-4,5-bisphosphate binding | Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions. |
| poly-ADP-D-ribose modification-dependent protein binding | Binding to a protein upon poly-ADP-ribosylation of the target protein. |
| protein homodimerization activity | Binding to an identical protein to form a homodimer. |
16 GO annotations of biological process
| Name | Definition |
|---|---|
| activation of innate immune response | Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species. |
| cAMP-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via cyclic AMP (cAMP). Includes production of cAMP, and downstream effectors that further transmit the signal within the cell. |
| cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. |
| cellular response to exogenous dsRNA | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus. |
| cGMP-mediated signaling | Any intracellular signal transduction in which the signal is passed on within the cell via cyclic GMP (cGMP). Includes production of cGMP, and downstream effectors that further transmit the signal within the cell. |
| defense response to virus | Reactions triggered in response to the presence of a virus that act to protect the cell or organism. |
| determination of adult lifespan | The pathways that regulate the duration of the adult phase of the life-cycle of an animal. |
| DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
| innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
| negative regulation of double-strand break repair via homologous recombination | Any process that stops, prevents, or reduces the frequency, rate or extent of double-strand break repair via homologous recombination. |
| paracrine signaling | The transfer of information from one cell to another, where the signal travels from the signal-producing cell to the receiving cell by passive diffusion or bulk flow in intercellular fluid. The signaling cell and the receiving cell are usually in the vicinity of each other. |
| positive regulation of cellular senescence | Any process that activates or increases the frequency, rate or extent of cellular senescence. |
| positive regulation of defense response to virus by host | Any host process that results in the promotion of antiviral immune response mechanisms, thereby limiting viral replication. |
| positive regulation of type I interferon production | Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families. |
| regulation of immunoglobulin production | Any process that modulates the frequency, rate, or extent of immunoglobulin production. |
| regulation of T cell activation | Any process that modulates the frequency, rate or extent of T cell activation. |
4 homologous proteins in AiPD
| 10 | 20 | 30 | 40 | 50 | 60 |
| MQPWHGKAMQ | RASEAGATAP | KASARNARGA | PMDPTESPAA | PEAALPKAGK | FGPARKSGSR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QKKSAPDTQE | RPPVRATGAR | AKKAPQRAQD | TQPSDATSAP | GAEGLEPPAA | REPALSRAGS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| CRQRGARCST | KPRPPPGPWD | VPSPGLPVSA | PILVRRDAAP | GASKLRAVLE | KLKLSRDDIS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TAAGMVKGVV | DHLLLRLKCD | SAFRGVGLLN | TGSYYEHVKI | SAPNEFDVMF | KLEVPRIQLE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EYSNTRAYYF | VKFKRNPKEN | PLSQFLEGEI | LSASKMLSKF | RKIIKEEIND | IKDTDVIMKR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KRGGSPAVTL | LISEKISVDI | TLALESKSSW | PASTQEGLRI | QNWLSAKVRK | QLRLKPFYLV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| PKHAKEGNGF | QEETWRLSFS | HIEKEILNNH | GKSKTCCENK | EEKCCRKDCL | KLMKYLLEQL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KERFKDKKHL | DKFSSYHVKT | AFFHVCTQNP | QDSQWDRKDL | GLCFDNCVTY | FLQCLRTEKL |
| 490 | 500 | 510 | 520 | ||
| ENYFIPEFNL | FSSNLIDKRS | KEFLTKQIEY | ERNNEFPVFD | EF |