Q684P5
Gene name |
RAP1GAP2 (GARNL4, KIAA1039, RAP1GA2) |
Protein name |
Rap1 GTPase-activating protein 2 |
Names |
Rap1GAP2, GTPase-activating Rap/Ran-GAP domain-like protein 4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23108 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q684P5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q684P5-F1 | Predicted | AlphaFoldDB |
539 variants for Q684P5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs868571850 CA286625301 |
3 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs867183095 CA286625303 |
4 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA286625302 rs746923589 |
4 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA286625304 rs867376354 |
5 | K>N | No |
ClinGen Ensembl |
|
|
rs768476208 CA8285121 |
6 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs776282806 CA8285122 |
6 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1271891271 CA397711164 |
7 | S>G | No |
ClinGen gnomAD |
|
|
CA286625306 rs944652282 |
10 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs867726132 CA286625309 |
11 | G>V | No |
ClinGen Ensembl |
|
|
CA286625308 rs867215744 |
11 | G>W | No |
ClinGen Ensembl |
|
|
CA286625310 rs866408033 |
12 | G>V | No |
ClinGen Ensembl |
|
|
CA286625311 rs924460885 |
14 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs138309648 CA8285138 |
17 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1362329867 CA397711717 |
18 | K>E | No |
ClinGen gnomAD |
|
|
rs1471272367 CA397711723 |
18 | K>R | No |
ClinGen gnomAD |
|
|
CA8285139 rs781124588 |
19 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285140 rs747898728 |
20 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA397711797 rs1597332151 |
22 | A>S | No |
ClinGen Ensembl |
|
|
rs1174208640 CA397711815 |
22 | A>V | No |
ClinGen gnomAD |
|
|
rs771203376 CA8285144 |
26 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1461971606 CA397711904 |
26 | V>F | No |
ClinGen gnomAD |
|
|
CA8285145 rs771203376 |
26 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397712893 rs1376214711 |
28 | K>E | No |
ClinGen gnomAD |
|
|
CA397712905 rs1200231762 |
29 | Q>R | No |
ClinGen TOPMed |
|
|
CA8285174 rs766023650 |
31 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs1050902580 CA286686424 |
33 | N>D | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 34 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8285176 rs754468943 |
35 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs754468943 CA397712944 |
35 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1328671931 CA397712951 |
36 | D>V | No |
ClinGen gnomAD |
|
|
rs1052744144 CA286686439 |
37 | A>S | No |
ClinGen TOPMed |
|
|
rs543243963 CA8285178 |
37 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA397712961 rs1225025493 |
38 | T>N | No |
ClinGen gnomAD |
|
|
rs1597571829 CA397712959 |
38 | T>P | No |
ClinGen Ensembl |
|
|
CA286686482 rs1043357831 |
40 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA397712977 rs749102479 |
41 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA8285182 rs749102479 |
41 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA286686487 rs905744179 |
41 | D>N | No |
ClinGen TOPMed |
|
|
CA397712983 rs1193363094 |
42 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8285183 rs757081722 |
42 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779304079 CA8285184 |
43 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779304079 CA397712988 |
43 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285186 rs772081049 |
44 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285187 rs775631659 |
45 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA397713008 rs1401627800 |
47 | P>A | No |
ClinGen TOPMed |
|
|
CA8285189 rs368651287 |
49 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 50 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200197822 CA8285191 |
51 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1421925645 CA397713042 |
53 | T>S | No |
ClinGen TOPMed |
|
|
rs1479671895 CA397713050 |
54 | M>T | No |
ClinGen gnomAD |
|
|
CA8285192 rs765537023 |
54 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs753861727 | 56 | S>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8285221 rs763671212 |
56 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs761842562 CA8285223 |
57 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750248839 CA8285225 |
58 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397645512 rs750248839 |
58 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780356057 CA8285227 |
61 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397645588 rs1177702356 |
62 | M>V | No |
ClinGen gnomAD |
|
|
rs751685393 CA8285228 |
67 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs768439917 CA8285257 |
68 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746720452 CA397646322 |
68 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs746720452 CA8285256 |
68 | G>W | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 70 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397646360 rs1479972630 |
71 | L>F | No |
ClinGen TOPMed |
|
|
CA397646388 rs1407725043 |
74 | Q>* | No |
ClinGen gnomAD |
|
|
rs776359668 CA8285259 |
76 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397646405 rs776359668 |
76 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1161940887 CA397646409 |
77 | G>E | No |
ClinGen gnomAD |
|
|
CA8285260 rs761442664 |
77 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 79 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769139751 CA8285261 |
79 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA8285262 rs773251575 |
80 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762769682 CA8285263 |
81 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1366805938 CA397646436 |
81 | N>S | No |
ClinGen gnomAD |
|
|
CA8285281 rs748773199 |
84 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs960952607 CA286939889 |
85 | Y>C | No |
ClinGen gnomAD |
|
|
rs770777215 CA8285282 |
86 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA397646498 rs1597734630 |
88 | Y>S | No |
ClinGen Ensembl |
|
|
rs1181392941 CA397646504 |
89 | P>H | No |
ClinGen gnomAD |
|
|
CA286939909 rs972277990 |
92 | D>N | No |
ClinGen gnomAD |
|
|
CA8285286 COSM977290 COSM977291 rs775727034 |
93 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs751009551 CA8285311 |
94 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA8285312 rs763550871 |
96 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs372935345 CA286940372 |
97 | K>M | No |
ClinGen ESP |
|
|
CA8285313 rs369230671 |
97 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1249339568 CA397646817 |
98 | G>R | No |
ClinGen TOPMed |
|
|
CA8285314 rs376892200 |
100 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA286940382 rs916245973 |
101 | Y>S | No |
ClinGen Ensembl |
|
|
CA8285316 rs777311706 |
102 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA397646851 rs1597736360 |
103 | Q>R | No |
ClinGen Ensembl |
|
|
rs1597736403 CA397646863 |
105 | I>T | No |
ClinGen Ensembl |
|
|
CA8285317 rs753505788 |
105 | I>V | No |
ClinGen ExAC |
|
|
rs778387132 CA8285319 |
112 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA8285321 rs567313018 |
113 | W>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746815636 CA8285323 |
115 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285324 rs768450726 |
116 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA8285325 COSM241351 rs776769717 |
117 | P>L | prostate [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA397646960 rs369295361 |
119 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285327 rs770068623 |
120 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM4129816 rs199980639 CA8285328 COSM4129817 |
121 | G>D | thyroid [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs1266997630 CA397646969 |
121 | G>S | No |
ClinGen gnomAD |
|
|
rs1597736582 CA397646976 |
122 | T>P | No |
ClinGen Ensembl |
|
|
CA397646989 rs1465896974 |
123 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs759866014 CA8285332 |
124 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1055821861 CA286940471 |
125 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA397647007 rs1242207097 |
125 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA397647018 rs1166384334 |
126 | L>P | No |
ClinGen gnomAD |
|
|
CA8285333 rs767890623 |
127 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1416559126 CA397647048 |
129 | S>N | No |
ClinGen TOPMed |
|
|
CA397647064 rs1157229211 |
130 | I>T | No |
ClinGen TOPMed |
|
|
CA8285334 rs753499042 |
131 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA397647169 rs1457879991 |
138 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1457879991 CA397647167 |
138 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
rs778476656 CA8285336 |
139 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs749944494 CA8285337 |
140 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA8285338 rs376239849 |
141 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1320689646 CA397647226 |
143 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 152 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8285341 rs768377488 |
156 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA397647369 rs1473332158 |
156 | A>V | No |
ClinGen TOPMed |
|
|
rs748439297 CA8285343 |
158 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8285342 rs781038438 |
158 | R>W | No |
ClinGen ExAC |
|
|
rs201871372 CA8285344 |
163 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA397647570 rs1460661830 |
170 | Y>C | No |
ClinGen gnomAD |
|
|
rs1181203871 CA397647595 |
172 | T>I | No |
ClinGen gnomAD |
|
|
rs1181203871 CA397647598 |
172 | T>N | No |
ClinGen gnomAD |
|
|
rs754931216 CA8285359 |
173 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs145636425 CA8285362 |
183 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA286941784 rs372306044 |
184 | K>E | No |
ClinGen ESP gnomAD |
|
|
rs749488788 CA8285364 |
186 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1222192261 CA397647781 |
188 | A>V | No |
ClinGen gnomAD |
|
|
CA397647822 rs1192211526 |
192 | E>K | No |
ClinGen gnomAD |
|
|
CA8285369 rs775939699 |
195 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772633231 CA8285368 |
195 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1390984507 CA397647873 |
196 | V>D | No |
ClinGen gnomAD |
|
|
rs190039938 CA286941856 |
197 | I>N | No |
ClinGen 1000Genomes gnomAD |
|
|
CA286941872 rs889818497 |
198 | L>F | No |
ClinGen TOPMed |
|
|
CA8285394 rs17762452 VAR_037553 |
202 | L>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs375908639 CA286908717 |
204 | T>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1460890060 CA397644308 |
205 | V>I | No |
ClinGen gnomAD |
|
|
rs767102582 CA8285397 |
206 | H>R | No |
ClinGen ExAC gnomAD |
|
|
RCV000947752 CA8285398 rs75798518 |
208 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA286908719 rs891194386 |
208 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1411244014 CA397644340 |
210 | P>A | No |
ClinGen gnomAD |
|
|
rs1411244014 CA397644341 |
210 | P>S | No |
ClinGen gnomAD |
|
|
CA8285400 rs764061946 |
211 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA8285401 rs554959728 |
215 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs756960027 CA8285402 |
216 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1001078849 CA286908736 |
217 | L>F | No |
ClinGen Ensembl |
|
|
rs371114680 CA286908738 |
223 | I>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA397644597 rs1393147663 |
227 | F>L | No |
ClinGen gnomAD |
|
|
CA397644616 rs1345422092 |
228 | C>S | No |
ClinGen gnomAD |
|
|
rs1231244658 CA397644670 |
232 | V>A | No |
ClinGen gnomAD |
|
|
rs1276697617 CA397644697 |
235 | R>K | No |
ClinGen gnomAD |
|
|
rs367931879 CA8285423 |
237 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285425 rs751643640 |
240 | L>M | No |
ClinGen ExAC TOPMed |
|
|
rs1348546975 CA397644744 |
242 | P>H | No |
ClinGen gnomAD |
|
|
rs201656017 CA8285427 |
243 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285446 rs751733599 |
244 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 246 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397645387 rs1457466266 |
252 | D>H | No |
ClinGen TOPMed |
|
|
CA8285448 rs367849340 |
256 | V>I | No |
ClinGen ESP ExAC TOPMed |
|
|
rs756590946 CA8285450 |
257 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs778271684 CA8285451 |
257 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs778271684 CA397645446 |
257 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA397645461 rs1436104249 |
258 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs371274877 CA8285452 |
258 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs779898521 CA8285454 |
263 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs768350118 CA8285456 |
264 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA286912195 rs944207789 |
264 | V>I | No |
ClinGen TOPMed |
|
|
CA8285457 rs775995917 |
266 | Y>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 269 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397645686 rs1200648150 |
270 | R>S | No |
ClinGen gnomAD |
|
|
rs995630102 CA286916615 |
279 | G>W | No |
ClinGen Ensembl |
|
|
rs1318781498 CA397646609 |
281 | N>D | No |
ClinGen TOPMed |
|
|
rs1437148230 CA397646612 |
281 | N>T | No |
ClinGen TOPMed |
|
|
rs1482905005 CA397646623 |
282 | E>D | No |
ClinGen gnomAD |
|
|
CA8285479 rs770768535 |
284 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377707656 CA8285480 |
286 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759259612 CA8285481 |
292 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA286916668 rs552834765 |
292 | D>V | No |
ClinGen 1000Genomes |
|
|
CA397646716 rs1375875709 |
296 | D>G | No |
ClinGen gnomAD |
|
|
CA397646714 rs1303597525 |
296 | D>H | No |
ClinGen gnomAD |
|
|
rs144985620 CA8285484 |
297 | T>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1391528681 CA397646728 |
298 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1309871189 CA397646735 |
299 | T>I | No |
ClinGen gnomAD |
|
|
rs1373969875 CA397646753 |
302 | D>H | No |
ClinGen TOPMed |
|
|
CA397646771 rs1190982792 |
304 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 307 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1387976639 CA397647952 |
307 | R>Q | No |
ClinGen gnomAD |
|
|
CA8285494 rs755620999 |
308 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA8285495 rs777249908 |
309 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1423706108 CA397647998 |
312 | V>M | No |
ClinGen TOPMed |
|
|
CA8285497 rs770858446 |
314 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA8285499 rs370929572 |
315 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA397648051 rs1489537126 |
316 | Q>P | No |
ClinGen gnomAD |
|
|
CA397648058 rs1194322220 |
317 | T>A | No |
ClinGen gnomAD |
|
|
rs1597824184 TCGA novel CA397648121 |
322 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA Ensembl |
|
CA8285505 rs761922333 |
327 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285504 rs776868511 |
327 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397648182 rs1389656726 |
328 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA286919134 rs919908533 |
332 | M>V | No |
ClinGen TOPMed |
|
|
CA8285508 rs567932623 |
335 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1432480071 CA397648358 |
343 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs775038809 CA286919144 |
344 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs376964895 CA8285512 |
346 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1285288695 CA397648923 |
352 | K>N | No |
ClinGen gnomAD |
|
| TCGA novel | 356 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA286920981 rs773498545 |
356 | G>R | No |
ClinGen Ensembl |
|
|
rs1235547167 CA397649001 |
357 | N>K | No |
ClinGen gnomAD |
|
|
rs758372483 CA8285536 |
358 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1411122753 CA397649030 |
360 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA397649034 rs1435535253 |
361 | A>T | No |
ClinGen TOPMed |
|
|
rs939584625 CA286920991 |
362 | I>V | No |
ClinGen Ensembl |
|
|
rs754771938 CA8285539 |
363 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397649049 rs1159795719 |
363 | I>T | No |
ClinGen gnomAD |
|
|
rs746855867 CA8285538 |
363 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397649079 rs1173455253 |
367 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8285541 rs748351260 |
369 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs773353846 CA8285543 |
370 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771499244 CA8285545 |
374 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 375 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397649132 rs1260592197 |
375 | M>T | No |
ClinGen TOPMed |
|
|
CA8285546 rs774671102 |
377 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397649173 rs1466485391 |
381 | L>* | No |
ClinGen TOPMed |
|
|
rs759938375 CA8285547 |
382 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA397649180 rs1217720742 |
382 | H>Y | No |
ClinGen gnomAD |
|
|
CA286921010 rs367580507 |
384 | Y>C | No |
ClinGen ESP |
|
|
rs1241709326 CA397649199 |
385 | I>V | No |
ClinGen TOPMed |
|
|
rs182035422 CA8285548 |
386 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs761439874 CA8285551 |
387 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761439874 CA8285550 |
387 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749956509 CA8285552 |
389 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA397649222 rs749956509 |
389 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs763486056 CA8285555 |
390 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs937660096 CA286921016 |
391 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs751429826 CA8285556 |
392 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA397649241 rs1189141103 |
392 | P>S | No |
ClinGen gnomAD |
|
| TCGA novel | 393 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs781131595 CA8285558 |
395 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA397649266 rs753028462 |
396 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285559 rs753028462 |
396 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397649269 rs369688833 |
397 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285561 rs777816358 |
397 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8285560 rs369688833 |
397 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373588451 CA286921023 |
400 | K>N | No |
ClinGen ESP gnomAD |
|
|
CA286925760 rs1021454285 |
401 | V>A | No |
ClinGen Ensembl |
|
|
rs757421497 CA8285581 |
403 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA397649907 rs1468506110 |
403 | V>F | No |
ClinGen gnomAD |
|
|
CA286925767 rs778841447 |
405 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA8285582 rs778841447 |
405 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs376115625 CA397649941 |
406 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376115625 CA8285584 |
406 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1520793 COSM1520792 CA286925776 rs959378939 |
406 | R>W | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA8285585 rs780499632 |
411 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs772961362 CA8285588 |
415 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8285587 rs557635021 |
415 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA397650076 rs1324529247 |
417 | P>S | No |
ClinGen gnomAD |
|
|
CA8285589 rs748892438 |
418 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA397650103 rs371060005 |
419 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285590 rs371060005 |
419 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 421 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767581023 CA8285593 |
421 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA397650269 rs1374938975 |
425 | G>D | No |
ClinGen gnomAD |
|
|
CA8285621 rs199628910 |
426 | P>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1235956182 CA397650295 |
427 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 434 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA397650390 rs1597854569 |
434 | T>S | No |
ClinGen Ensembl |
|
|
CA397650446 rs1304644379 |
438 | N>S | No |
ClinGen gnomAD |
|
|
CA286926121 rs756575370 |
439 | A>T | No |
ClinGen Ensembl |
|
|
CA397650467 rs1344992476 |
440 | E>K | No |
ClinGen TOPMed |
|
|
rs748481508 CA397650500 |
442 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1382327 CA8285625 COSM1382328 rs748481508 |
442 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA286926123 rs917099267 |
443 | C>S | No |
ClinGen TOPMed |
|
|
CA8285626 rs756475782 |
445 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285627 rs778744234 |
446 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1194445663 CA397650567 |
447 | D>H | No |
ClinGen gnomAD |
|
|
rs1395487718 CA397650589 |
448 | K>R | No |
ClinGen gnomAD |
|
|
CA397650597 rs1161097851 |
449 | F>L | No |
ClinGen TOPMed |
|
|
CA8285629 rs771765452 |
450 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285645 rs754195913 |
454 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs372912230 CA8285646 |
455 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1057191693 CA286927252 |
455 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA8285647 rs779810626 |
459 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1344661221 CA397650692 |
460 | L>R | No |
ClinGen TOPMed |
|
|
rs748112661 CA8285651 CA397650711 |
463 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs761039408 CA8285650 |
463 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397650714 rs1315358604 |
464 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA8285653 rs773008500 |
466 | D>G | Variant assessed as Somatic; 0.0001857 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1483978320 CA397650726 |
466 | D>N | No |
ClinGen gnomAD |
|
|
rs762672653 CA8285654 |
467 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA286927274 rs36016465 |
469 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA286927277 rs563503874 |
470 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8285657 rs563503874 |
470 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8285658 rs199942375 |
470 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397650757 rs761276794 |
471 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs761276794 CA8285660 |
471 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs758784494 CA286927288 |
476 | L>V | No |
ClinGen Ensembl |
|
|
rs1484881594 CA397650803 |
478 | L>V | No |
ClinGen TOPMed |
|
|
rs764628288 CA8285661 |
480 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA397650814 rs1346197626 |
480 | P>S | No |
ClinGen gnomAD |
|
|
CA8285663 rs757645781 |
483 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 483 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1415867480 CA397650846 |
484 | K>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1415867480 CA397650845 |
484 | K>R | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 486 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA286927292 rs1005692064 |
486 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs779624863 CA8285664 |
487 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs1225716063 CA397650898 |
492 | G>R | No |
ClinGen gnomAD |
|
|
rs376312444 CA8285668 |
493 | F>L | No |
ClinGen ESP ExAC gnomAD |
|
| rs779171787 | 493 | F>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs376312444 CA397650904 |
493 | F>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA397650921 rs964630173 |
495 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs778201396 CA286927320 |
495 | E>V | No |
ClinGen Ensembl |
|
| TCGA novel | 497 | F>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA286937008 rs868395003 |
500 | A>T | No |
ClinGen Ensembl |
|
|
rs1370917017 CA397652460 |
500 | A>V | No |
ClinGen TOPMed |
|
|
CA397652462 rs1187573004 |
501 | I>V | No |
ClinGen TOPMed |
|
|
CA397652470 rs1394960926 |
502 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA397652471 rs1412068087 |
502 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8285690 rs757054651 |
503 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757054651 CA397652475 |
503 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397652481 rs1442413773 |
504 | R>C | No |
ClinGen TOPMed |
|
|
COSM1382334 rs771141288 COSM1382333 CA286937013 |
504 | R>H | ovary Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1372972760 CA397652494 |
506 | H>Y | No |
ClinGen gnomAD |
|
|
CA397652511 rs1269594454 |
508 | M>R | No |
ClinGen gnomAD |
|
|
CA397652507 rs1367167592 |
508 | M>V | No |
ClinGen gnomAD |
|
|
CA8285692 rs569151472 |
510 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8285693 rs569151472 |
510 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs960146538 CA286937038 |
512 | V>L | No |
ClinGen TOPMed |
|
|
CA397652547 rs1215284716 |
514 | G>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 516 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8285695 rs374406416 |
518 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA286937049 rs994818571 |
519 | H>Y | No |
ClinGen gnomAD |
|
|
rs1597885656 CA397652596 |
520 | S>R | No |
ClinGen Ensembl |
|
| TCGA novel | 521 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1049212624 CA286937053 |
521 | G>R | No |
ClinGen gnomAD |
|
|
rs61755902 CA286937055 |
522 | G>C | No |
ClinGen Ensembl |
|
|
CA397652613 rs1476687059 |
523 | I>M | No |
ClinGen gnomAD |
|
|
CA286937073 rs889214737 |
524 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1334747410 CA397652617 |
524 | P>L | No |
ClinGen TOPMed |
|
|
CA397652614 rs889214737 |
524 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs889214737 CA286937070 |
524 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1417293276 CA397652618 |
525 | G>S | No |
ClinGen gnomAD |
|
|
CA286937075 rs984640552 |
526 | S>G | No |
ClinGen TOPMed |
|
|
CA397652633 rs1459918575 |
527 | L>F | No |
ClinGen gnomAD |
|
|
rs1395491431 CA397652645 |
529 | G>R | No |
ClinGen gnomAD |
|
|
rs1381800943 CA397652653 |
530 | G>C | No |
ClinGen gnomAD |
|
|
rs1317397226 CA397652659 |
531 | I>L | No |
ClinGen gnomAD |
|
|
rs1317397226 CA397652658 |
531 | I>V | No |
ClinGen gnomAD |
|
|
CA8285700 rs367545939 |
532 | S>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA397652673 rs1392406631 |
533 | H>P | No |
ClinGen TOPMed |
|
|
CA397652674 rs1392406631 |
533 | H>R | No |
ClinGen TOPMed |
|
|
CA397652680 rs1597885851 |
534 | N>D | No |
ClinGen Ensembl |
|
|
rs763191794 CA8285701 |
534 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA397652697 rs1230910727 |
535 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1274430088 CA397652704 |
535 | S>N | No |
ClinGen gnomAD |
|
|
rs1335088862 CA397652713 |
536 | M>V | No |
ClinGen gnomAD |
|
|
rs1204135884 CA397652806 |
542 | T>I | No |
ClinGen gnomAD |
|
|
rs375234077 CA397652833 |
544 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375234077 CA8285703 |
544 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA286938476 rs544129149 |
545 | P>A | No |
ClinGen 1000Genomes gnomAD |
|
|
rs200375904 CA286938477 |
546 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs372158286 CA8285731 |
546 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397653443 rs1213697095 |
547 | V>G | No |
ClinGen gnomAD |
|
|
CA286938522 rs913762435 |
548 | V>A | No |
ClinGen TOPMed |
|
|
rs913762435 CA397653447 |
548 | V>G | No |
ClinGen TOPMed |
|
|
CA286938513 rs1052160276 |
548 | V>M | No |
ClinGen Ensembl |
|
|
CA8285733 rs375879137 |
549 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs748286381 CA8285735 |
550 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA8285736 rs769743620 |
551 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1597891867 CA397653494 |
552 | V>G | No |
ClinGen Ensembl |
|
|
CA8285738 rs372980490 |
552 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA397653526 rs1597891879 |
554 | N>T | No |
ClinGen Ensembl |
|
|
rs771365418 CA8285739 |
555 | Q>* | No |
ClinGen ExAC TOPMed |
|
|
rs771365418 CA397653533 |
555 | Q>K | No |
ClinGen ExAC TOPMed |
|
|
rs1175499235 CA397653566 |
557 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA397653564 rs1175499235 |
557 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA8285740 rs376172279 |
557 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1597891922 CA397653583 |
558 | S>R | No |
ClinGen Ensembl |
|
|
rs1378126465 CA397653584 |
559 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8285741 rs775012055 |
561 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA8285742 rs768318872 |
562 | R>* | No |
ClinGen ExAC gnomAD |
|
|
rs776122879 CA8285743 |
562 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs549183815 CA8285745 |
563 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA8285746 rs750434688 |
563 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA397653641 rs750434688 |
563 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397653652 rs1236941338 |
564 | S>L | No |
ClinGen gnomAD |
|
|
rs867704226 CA286938596 |
567 | F>S | No |
ClinGen Ensembl |
|
|
rs751434439 CA397653700 |
568 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs751434439 CA8285749 |
568 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA397653698 rs1597892076 |
568 | P>S | No |
ClinGen Ensembl |
|
|
rs1056218446 CA286938602 |
569 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1056218446 CA397653709 |
569 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8285750 rs375913923 |
569 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285751 rs200335176 |
571 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs781454135 CA8285752 |
572 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285754 rs373169664 |
573 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs749319184 CA8285755 |
576 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA397653798 rs1427874725 |
576 | G>C | No |
ClinGen gnomAD |
|
|
rs749319184 CA8285756 |
576 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1014784593 CA286938644 |
577 | Q>E | No |
ClinGen gnomAD |
|
|
CA8285757 rs779343807 |
577 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA8285759 rs772392945 |
579 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285758 rs746279901 |
579 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1294505148 CA397653848 |
580 | S>G | No |
ClinGen gnomAD |
|
|
rs1361646468 CA397653856 |
580 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs747743511 CA8285761 COSM230326 |
581 | R>Q | NS [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs376677490 CA8285760 |
581 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8285762 rs769431801 |
583 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285763 rs772603181 |
583 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1361513297 CA397654514 |
586 | S>N | No |
ClinGen gnomAD |
|
|
CA397654540 rs1311564176 |
588 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA286942522 rs898752398 |
588 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA397654537 rs1311564176 |
588 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8285795 rs780572360 |
593 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs375851472 CA8285796 |
595 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA397654628 rs1371463084 |
596 | G>D | No |
ClinGen gnomAD |
|
|
CA397654649 rs1225625644 |
598 | H>L | No |
ClinGen gnomAD |
|
|
rs755350248 CA8285797 |
599 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA397654653 rs1227754346 |
599 | S>P | No |
ClinGen TOPMed |
|
|
rs777334043 CA8285798 |
600 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1278083634 CA397654702 |
603 | I>T | No |
ClinGen gnomAD |
|
|
CA397654741 rs1443707756 |
607 | T>N | No |
ClinGen gnomAD |
|
|
rs367794177 CA397654747 |
608 | S>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285800 rs367794177 |
608 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778566471 CA8285801 |
609 | S>C | No |
ClinGen ExAC |
|
|
TCGA novel CA8285803 rs771923569 |
610 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
CA397654776 rs1180079675 |
612 | S>I | No |
ClinGen gnomAD |
|
|
CA397654774 rs1180079675 |
612 | S>T | No |
ClinGen gnomAD |
|
|
CA8285804 rs775474346 |
613 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1306038833 CA397654779 |
613 | S>T | No |
ClinGen TOPMed |
|
|
rs768493495 COSM86108 CA8285806 |
614 | P>L | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA8285805 rs760426134 |
614 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8285808 COSM1172396 COSM1172397 rs762037360 |
615 | E>D | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1597904429 CA397654804 |
615 | E>V | No |
ClinGen Ensembl |
|
|
CA397654828 rs1328290885 |
617 | C>F | No |
ClinGen gnomAD |
|
|
CA397654850 rs1352791361 |
619 | N>K | No |
ClinGen gnomAD |
|
|
rs369289812 CA8285811 |
621 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA397654964 rs1452521321 |
624 | F>S | No |
ClinGen gnomAD |
|
|
rs146149547 CA8285828 |
625 | M>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs146149547 CA8285827 |
625 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1240857890 CA397654984 |
626 | K>Q | No |
ClinGen gnomAD |
|
|
rs773401819 CA8285829 |
629 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1194489607 CA397655040 |
630 | N>D | No |
ClinGen gnomAD |
|
|
CA397655056 rs1460099083 |
631 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
CA397655053 rs1460099083 |
631 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs766479387 CA286942819 |
632 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774783201 CA397655067 |
632 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA8285832 rs774783201 |
632 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA8285831 rs766479387 |
632 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1401708341 CA397655078 |
633 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs768094326 CA397655074 |
633 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285834 rs768094326 |
633 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1401708341 CA397655079 |
633 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA397655096 rs1242211572 |
635 | S>Y | No |
ClinGen gnomAD |
|
|
rs373316733 CA8285836 |
636 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs955138969 CA286942837 |
636 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA397655101 rs373316733 |
636 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1489569483 CA397655115 |
637 | S>Y | No |
ClinGen gnomAD |
|
|
CA397655124 rs765020702 |
638 | S>F | No |
ClinGen ExAC TOPMed |
|
|
CA8285837 rs765020702 |
638 | S>Y | No |
ClinGen ExAC TOPMed |
|
|
CA397655135 rs1256948897 |
639 | S>C | No |
ClinGen gnomAD |
|
|
CA8285840 rs377324035 |
644 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285839 rs377324035 |
644 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8285841 rs746437903 |
647 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397655227 rs746437903 |
647 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397655234 rs1411969921 |
648 | A>T | No |
ClinGen TOPMed |
|
|
CA397655274 rs1348343363 |
651 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA397655277 rs1348343363 |
651 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs971435063 CA286942904 |
652 | E>K | No |
ClinGen TOPMed |
|
|
CA397655302 rs1340707769 |
654 | M>V | No |
ClinGen gnomAD |
|
|
rs535243979 CA397655325 |
655 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8285847 rs749516545 |
658 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397655380 rs1484771563 |
660 | G>E | No |
ClinGen gnomAD |
|
|
rs774517119 CA8285849 |
660 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA286943391 rs986897531 |
662 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA286943395 rs912819099 |
662 | S>I | No |
ClinGen Ensembl |
|
|
CA8285869 COSM1382337 rs776195452 COSM1382338 |
664 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs535215181 CA286943405 |
665 | S>P | No |
ClinGen 1000Genomes |
|
|
CA397655467 rs1302564091 |
666 | T>A | No |
ClinGen gnomAD |
|
|
rs769218293 CA8285871 |
666 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs777085909 CA8285872 |
670 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA286943425 rs190111838 |
671 | K>Q | No |
ClinGen 1000Genomes |
|
|
CA397655512 rs1318897969 |
673 | E>K | No |
ClinGen gnomAD |
|
|
rs1597907094 CA397655523 |
674 | V>G | No |
ClinGen Ensembl |
|
|
CA286943432 rs989518287 |
676 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1192908859 CA397655550 |
678 | S>G | No |
ClinGen gnomAD |
|
|
rs1267966816 CA397655570 |
679 | P>L | No |
ClinGen gnomAD |
|
|
CA397655567 rs1267966816 |
679 | P>Q | No |
ClinGen gnomAD |
|
|
rs766105287 CA8285874 |
680 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA8285875 rs369926973 |
681 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA286943434 rs369926973 |
681 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 681 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1332464039 CA397655596 |
682 | S>N | No |
ClinGen gnomAD |
|
|
rs767004022 CA8285877 |
683 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs767004022 CA286943445 |
683 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1294700773 CA397655617 |
684 | E>K | No |
ClinGen gnomAD |
|
|
rs1384884430 CA397655649 |
686 | P>R | No |
ClinGen gnomAD |
|
|
rs1273713650 CA397655680 |
689 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA8285880 rs777517969 |
689 | G>R | No |
ClinGen ExAC |
|
|
rs1280203063 CA397655702 |
691 | A>V | No |
ClinGen gnomAD |
|
|
rs1232952097 CA397655705 |
692 | A>T | No |
ClinGen gnomAD |
|
|
CA397655714 rs1310831555 |
692 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs746073237 CA8285884 |
694 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs779259683 CA8285883 |
694 | P>T | No |
ClinGen ExAC |
|
|
CA397655736 rs1214308561 |
695 | I>V | No |
ClinGen gnomAD |
|
|
CA397655764 rs1264754372 |
697 | M>T | No |
ClinGen gnomAD |
|
|
rs747045279 CA8285887 |
699 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs780285132 CA397655786 |
699 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1411179181 CA397655796 |
700 | S>N | No |
ClinGen gnomAD |
|
|
rs937506534 CA286947009 |
704 | A>D | No |
ClinGen Ensembl |
|
|
CA397656123 rs1433333972 |
705 | K>R | No |
ClinGen TOPMed |
|
|
CA397656138 rs531382074 |
707 | R>I | No |
ClinGen gnomAD |
|
|
CA286947011 rs531382074 |
707 | R>K | No |
ClinGen gnomAD |
|
|
rs1038362742 CA286947017 |
709 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA8285905 rs754983165 |
710 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA397656157 rs754983165 |
710 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285906 rs754983165 |
710 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770280991 CA8285908 |
712 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1055941723 CA286947045 |
713 | N>S | No |
ClinGen Ensembl |
|
|
rs749616295 CA8285910 |
714 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775089025 CA8285912 |
715 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775089025 CA397656182 |
715 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8285914 rs201869060 |
717 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776146779 CA8285915 |
717 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776146779 CA397656198 |
717 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs576727576 CA286947113 |
718 | F>C | No |
ClinGen 1000Genomes gnomAD |
|
|
CA8285916 rs761658523 |
720 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA397656223 rs1415100307 |
721 | L>V | No |
ClinGen gnomAD |
|
|
rs370636290 CA8285918 |
722 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA8285919 rs758246702 |
723 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374346245 CA397656235 |
723 | H>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA397656238 rs758246702 |
723 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374346245 CA286947153 |
723 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1435729817 CA397656246 |
724 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
COSM1223129 COSM1223130 CA8285922 rs200075336 |
728 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8285943 rs752746826 |
729 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA397656623 rs1297481886 |
730 | H>P | No |
ClinGen gnomAD |
No associated diseases with Q684P5
1 regional properties for Q684P5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Rap/Ran-GAP domain | 248 - 464 | IPR000331 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| centrosome | A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nuclear membrane | Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. |
| perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| activation of GTPase activity | Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP. |
| adaptive immune response | An immune response mediated by cells expressing specific receptors for antigen produced through a somatic diversification process, and allowing for an enhanced secondary response to subsequent exposures to the same antigen (immunological memory). |
| regulation of cell size | Any process that modulates the size of a cell. |
| regulation of small GTPase mediated signal transduction | Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5ZMV8 | RAP1GAP2 | Rap1 GTPase-activating protein 2 | Gallus gallus (Chicken) | PR |
| Q6GYQ0 | RALGAPA1 | Ral GTPase-activating protein subunit alpha-1 | Homo sapiens (Human) | PR |
| Q6GYP7 | Ralgapa1 | Ral GTPase-activating protein subunit alpha-1 | Mus musculus (Mouse) | PR |
| Q5SVL6 | Rap1gap2 | Rap1 GTPase-activating protein 2 | Mus musculus (Mouse) | PR |
| P86409 | RALGAPA1 | Ral GTPase-activating protein subunit alpha-1 | Sus scrofa (Pig) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MFGRKRSVSF | GGFGWIDKTM | LASLKVKKQE | LANSSDATLP | DRPLSPPLTA | PPTMKSSEFF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EMLEKMQGIK | LEEQKPGPQK | NKDDYIPYPS | IDEVVEKGGP | YPQVILPQFG | GYWIEDPENV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GTPTSLGSSI | CEEEEEDNLS | PNTFGYKLEC | KGEARAYRRH | FLGKDHLNFY | CTGSSLGNLI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LSVKCEEAEG | IEYLRVILRS | KLKTVHERIP | LAGLSKLPSV | PQIAKAFCDD | AVGLRFNPVL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| YPKASQMIVS | YDEHEVNNTF | KFGVIYQKAR | QTLEEELFGN | NEESPAFKEF | LDLLGDTITL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QDFKGFRGGL | DVTHGQTGVE | SVYTTFRDRE | IMFHVSTKLP | FTDGDAQQLQ | RKRHIGNDIV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AIIFQEENTP | FVPDMIASNF | LHAYIVVQVE | TPGTETPSYK | VSVTAREDVP | TFGPPLPSPP |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VFQKGPEFRE | FLLTKLTNAE | NACCKSDKFA | KLEDRTRAAL | LDNLHDELHA | HTQAMLGLGP |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EEDKFENGGH | GGFLESFKRA | IRVRSHSMET | MVGGQKKSHS | GGIPGSLSGG | ISHNSMEVTK |
| 550 | 560 | 570 | 580 | 590 | 600 |
| TTFSPPVVAA | TVKNQSRSPI | KRRSGLFPRL | HTGSEGQGDS | RARCDSTSST | PKTPDGGHSS |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QEIKSETSSN | PSSPEICPNK | EKPFMKLKEN | GRAISRSSSS | TSSVSSTAGE | GEAMEEGDSG |
| 670 | 680 | 690 | 700 | 710 | 720 |
| GSQPSTTSPF | KQEVFVYSPS | PSSESPSLGA | AATPIIMSRS | PTDAKSRNSP | RSNLKFRFDK |
| LSHASSGAGH |