Q4G0J3
Gene name |
LARP7 |
Protein name |
La-related protein 7 |
Names |
La ribonucleoprotein domain family member 7, hLARP7, P-TEFb-interaction protein for 7SK stability, PIP7S |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:51574 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
487 variants for Q4G0J3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1057519297 RCV000415594 |
72 | S>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
|
CA249063 RCV000202866 RCV000998258 RCV002280110 rs200393300 |
107 | T>I | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000723344 rs1560929898 |
143 | R>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1554011296 RCV000627072 |
169 | A>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002280102 RCV000964409 CA153524 rs141178932 RCV000117486 |
217 | E>D | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP TOPMed dbSNP gnomAD |
|
CA3049234 rs775430086 RCV000987466 |
227 | R>* | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs763929099 RCV000599079 RCV001262130 |
279 | R>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000032816 rs1057519017 |
344 | T>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001268018 RCV000824903 rs775657157 |
364 | K>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000991426 rs1578642104 |
510 | Y>missing | Microcephalic primordial dwarfism, Alazami type [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_083351 | 558 | I>KRLDWQRLNKRVNI | ALAZS; reduced 2'-O-methylation of U6 snRNAs and defects in mRNA splicing [UniProt] | Yes | UniProt |
|
RCV000117485 rs79383654 CA153522 RCV002055288 |
4 | E>K | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs757343808 CA3048915 |
5 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3048916 rs779049757 |
5 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs757343808 CA103800760 |
5 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3048917 rs750625621 |
6 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3048918 rs758503259 |
8 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs780413411 CA3048919 |
9 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA103800794 rs907105522 |
12 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1212808208 CA357919785 |
16 | S>N | No |
ClinGen TOPMed |
|
|
CA3048921 rs376550474 |
16 | S>R | No |
ClinGen ESP ExAC |
|
|
rs1335444372 CA357919801 |
17 | T>N | No |
ClinGen TOPMed |
|
|
CA357920567 rs1269618076 RCV000520554 |
22 | E>V | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
RCV000958538 rs570445594 |
22 | E>missing | No |
ClinVar dbSNP |
|
|
rs781656152 CA3048927 |
23 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3048930 rs770446408 |
24 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1216876285 CA357920685 |
27 | K>R | No |
ClinGen gnomAD |
|
|
CA357920706 rs1256714961 |
28 | R>W | No |
ClinGen gnomAD |
|
|
CA357920737 rs1457661638 |
30 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3048931 rs773692861 |
30 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA357920759 rs1449547335 |
31 | V>A | No |
ClinGen gnomAD |
|
|
rs759254399 CA3048932 |
31 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA357920797 rs1395944747 |
33 | Q>L | No |
ClinGen TOPMed |
|
|
rs199656560 CA3048933 |
34 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs775430171 CA3048934 |
36 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs369193429 CA3048935 |
37 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1294001569 CA357920894 |
43 | D>H | No |
ClinGen gnomAD |
|
|
rs1461842983 CA357920939 |
45 | W>* | No |
ClinGen gnomAD |
|
|
rs1327691390 CA357920958 |
46 | F>Y | No |
ClinGen gnomAD |
|
|
rs1167951129 CA357920982 |
48 | D>A | No |
ClinGen TOPMed |
|
|
rs761836331 CA357920979 |
48 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA3048938 rs761836331 |
48 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA357921020 rs1323112873 |
51 | L>R | No |
ClinGen gnomAD |
|
|
rs1392854355 CA357921044 |
53 | K>R | No |
ClinGen TOPMed |
|
|
rs1192846479 CA357921078 |
55 | R>S | No |
ClinGen TOPMed |
|
|
rs750414935 CA3048940 |
58 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357921120 rs1248178105 |
59 | E>G | No |
ClinGen TOPMed |
|
|
rs201841958 CA103802416 |
62 | E>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs758628046 CA357921196 |
64 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA103802425 rs758628046 |
64 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs758628046 CA3048942 |
64 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs780254262 CA3048943 |
65 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA3048945 rs755313987 |
66 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs764707281 CA3048993 |
68 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs1283445477 CA357921384 |
69 | V>I | No |
ClinGen TOPMed |
|
|
CA3048995 rs757795390 |
70 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA3048994 rs754363057 |
70 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA357921411 rs1364226698 |
71 | I>V | No |
ClinGen gnomAD |
|
|
CA357921433 rs1193660521 |
73 | L>V | No |
ClinGen gnomAD |
|
|
rs1258834841 CA357921457 |
75 | V>A | No |
ClinGen gnomAD |
|
|
rs1272277010 CA357921460 |
76 | S>P | No |
ClinGen gnomAD |
|
|
CA357921470 rs1180499031 |
77 | F>L | No |
ClinGen gnomAD |
|
|
CA103804534 rs908150942 |
80 | M>I | No |
ClinGen Ensembl |
|
|
CA3048996 rs779730827 |
80 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357921531 rs1205338787 |
81 | K>E | No |
ClinGen gnomAD |
|
|
rs746456423 CA3048997 |
81 | K>I | No |
ClinGen ExAC gnomAD |
|
|
CA357921579 rs1456600723 |
84 | T>I | No |
ClinGen TOPMed |
|
|
CA3049000 rs754729747 |
85 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA357921587 rs1360839073 |
85 | T>S | No |
ClinGen gnomAD |
|
|
rs748028917 CA3049002 |
86 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769446246 CA3049003 |
86 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs770799183 CA3049006 |
88 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA357921685 rs1411893627 |
93 | A>V | No |
ClinGen TOPMed |
|
|
CA3049009 rs759607066 |
95 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA3049010 rs767837318 |
96 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000489417 rs1085307744 |
100 | V>missing | No |
ClinVar dbSNP |
|
|
CA357921837 rs1317670018 |
102 | L>F | No |
ClinGen gnomAD |
|
|
rs1210135862 CA357921839 |
102 | L>H | No |
ClinGen TOPMed gnomAD |
|
|
CA3049041 rs775598872 |
103 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA103804814 rs554726477 |
104 | L>F | No |
ClinGen 1000Genomes gnomAD |
|
|
CA357921860 rs1560928633 |
104 | L>S | No |
ClinGen Ensembl |
|
|
CA3049042 rs760828030 |
105 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1478786721 CA357921890 |
107 | T>A | No |
ClinGen gnomAD |
|
|
CA357921897 rs200393300 |
107 | T>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs374971073 CA103804842 |
108 | R>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA357921922 rs540902339 |
109 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA357921933 rs1164711856 |
110 | R>Q | No |
ClinGen gnomAD |
|
|
CA16618023 RCV000479468 rs1064795626 |
110 | R>W | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA103804870 rs960482888 |
111 | R>G | No |
ClinGen TOPMed |
|
|
rs576858846 CA3049046 |
112 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750928970 CA3049047 |
117 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA357922029 rs1405683211 |
117 | E>K | No |
ClinGen Ensembl |
|
|
rs1340381514 CA357922088 |
121 | D>G | No |
ClinGen gnomAD |
|
|
rs766962342 CA3049049 |
125 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs983509124 CA3049050 |
125 | R>H | No |
ClinGen Ensembl |
|
|
rs1578583811 CA357922159 |
126 | T>A | No |
ClinGen Ensembl |
|
|
CA3049052 rs752197537 |
126 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs779393676 CA103804915 |
127 | V>A | No |
ClinGen TOPMed |
|
|
rs777396139 CA3049054 |
128 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1026406567 CA103804942 |
129 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1578585790 CA357923071 |
133 | P>A | No |
ClinGen Ensembl |
|
|
CA357923097 rs1560929668 |
134 | K>R | No |
ClinGen Ensembl |
|
|
rs748408446 CA3049085 |
135 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs201063875 CA3049087 |
136 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201063875 CA357923124 |
136 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049090 rs749662507 |
137 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357923141 rs1560929770 |
138 | H>D | No |
ClinGen Ensembl |
|
|
CA3049092 rs771396636 |
139 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs774897137 CA3049093 |
139 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1463470204 CA357923197 |
142 | E>K | No |
ClinGen TOPMed |
|
|
CA357923351 rs1402868011 |
150 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3049100 rs548535574 |
151 | V>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs750245131 CA3049102 |
152 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1330486673 CA357923400 |
153 | Y>C | No |
ClinGen gnomAD |
|
|
CA357923433 rs1455104318 |
154 | I>T | No |
ClinGen TOPMed |
|
|
CA3049103 rs758192482 |
154 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766268120 CA3049105 |
156 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs754922071 CA3049106 |
157 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1401301984 CA357923539 |
158 | H>P | No |
ClinGen TOPMed gnomAD |
|
|
CA357923561 rs1265308846 |
159 | Y>C | No |
ClinGen gnomAD |
|
|
rs1193010379 CA357923556 |
159 | Y>D | No |
ClinGen gnomAD |
|
|
rs1386427059 CA357923591 |
160 | K>T | No |
ClinGen TOPMed |
|
|
rs867964802 CA103805323 |
161 | S>F | No |
ClinGen Ensembl |
|
|
CA3049108 rs368554683 |
161 | S>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA103805316 rs867964802 |
161 | S>Y | No |
ClinGen Ensembl |
|
|
CA3049109 rs372844097 |
162 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs778040449 CA3049110 |
162 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA3049111 rs749660151 |
163 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3049112 rs375509442 |
165 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA357923741 rs1459086220 |
168 | F>Y | No |
ClinGen gnomAD |
|
|
rs746396308 CA3049114 |
169 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA103805351 rs1027484953 |
172 | E>K | No |
ClinGen TOPMed |
|
|
CA3049115 rs772509043 |
174 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA357923929 rs1313094875 |
180 | A>S | No |
ClinGen gnomAD |
|
|
CA357923936 rs1303748178 |
181 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1322584885 CA357923943 |
181 | K>I | No |
ClinGen gnomAD |
|
|
rs1224009316 CA357923946 |
181 | K>N | No |
ClinGen gnomAD |
|
|
CA357923957 rs951872139 |
183 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
CA357923963 rs1208331721 |
183 | I>M | No |
ClinGen TOPMed |
|
|
CA103805359 rs951872139 |
183 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA357923971 rs1217348030 |
184 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA357923977 rs1265993631 |
184 | E>A | No |
ClinGen gnomAD |
|
|
CA357923979 CA3049120 rs199621386 |
184 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA357923970 rs1217348030 |
184 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs772548477 CA3049165 |
186 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs764991008 RCV000998259 |
186 | L>missing | No |
ClinVar dbSNP |
|
|
rs1480161639 CA357924093 |
187 | N>D | No |
ClinGen TOPMed |
|
|
CA3049167 rs762683568 |
188 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1335783331 CA357924195 |
195 | R>I | No |
ClinGen gnomAD |
|
|
CA357924199 rs1382350150 |
195 | R>S | No |
ClinGen gnomAD |
|
|
rs368979221 CA103805660 |
199 | I>L | No |
ClinGen ExAC |
|
|
CA3049173 rs767609358 |
199 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049171 rs368979221 |
199 | I>V | No |
ClinGen ExAC |
|
|
rs1223785261 CA357924295 |
203 | T>I | No |
ClinGen gnomAD |
|
|
CA3049175 rs752648352 |
205 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs570520937 CA3049176 |
206 | N>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
RCV000627454 rs1554011503 |
207 | K>missing | No |
ClinVar dbSNP |
|
|
rs753801802 CA3049178 |
208 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357924373 rs1180099256 |
209 | I>L | No |
ClinGen gnomAD |
|
|
CA3049180 rs779100415 |
210 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1427210228 CA357924420 |
211 | A>S | No |
ClinGen gnomAD |
|
|
CA357924443 rs1412647447 |
212 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA3049182 rs750843501 |
213 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs961016089 CA103805736 |
214 | V>I | No |
ClinGen gnomAD |
|
|
CA3049224 rs756794031 |
217 | E>Q | No |
ClinGen ExAC |
|
|
rs1318379679 CA357924696 |
219 | K>N | No |
ClinGen TOPMed |
|
|
CA3049227 rs778523609 |
220 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA357924722 rs1268748282 |
221 | K>Q | No |
ClinGen gnomAD |
|
|
CA103805998 rs979615281 |
221 | K>R | No |
ClinGen Ensembl |
|
|
CA3049230 rs745533824 |
222 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3049233 rs771789749 |
223 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA103806040 rs935484466 |
224 | K>Q | No |
ClinGen Ensembl |
|
|
CA357924811 rs1383832147 |
226 | G>D | No |
ClinGen TOPMed |
|
|
CA3049236 rs768695672 |
227 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1263838315 CA357924837 |
229 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1263838315 CA357924833 |
229 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1478736655 CA357924856 |
230 | K>* | No |
ClinGen gnomAD |
|
|
rs1560932804 CA357924867 |
230 | K>N | No |
ClinGen Ensembl |
|
|
CA357924872 rs776408557 |
231 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049241 rs776408557 |
231 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049240 rs776408557 |
231 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357924888 rs1217556940 |
231 | E>V | No |
ClinGen TOPMed |
|
|
CA3049244 rs773219216 |
232 | D>E | No |
ClinGen ExAC TOPMed |
|
|
rs1164032252 RCV001268017 |
233 | N>missing | No |
ClinVar dbSNP |
|
|
rs1416134291 CA357924935 |
233 | N>S | No |
ClinGen gnomAD |
|
|
CA357924960 rs1159329324 |
234 | I>T | No |
ClinGen TOPMed |
|
|
CA357925002 rs1422825360 |
236 | A>S | No |
ClinGen gnomAD |
|
|
CA3049248 rs766587064 |
239 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357925073 rs1330670821 |
239 | E>K | No |
ClinGen gnomAD |
|
|
CA3049250 rs755277679 |
241 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752023817 CA3049249 |
241 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA357925126 rs1316747223 |
241 | M>V | No |
ClinGen gnomAD |
|
|
CA3049251 rs768113172 |
243 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs184953760 CA3049252 |
243 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA357925184 rs1363941598 |
244 | S>G | No |
ClinGen TOPMed |
|
|
CA357925207 rs756638578 |
244 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA103806211 rs202229270 |
244 | S>R | No |
ClinGen 1000Genomes |
|
|
rs756638578 CA3049254 |
244 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA357925211 rs1203287763 |
245 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs61602805 CA3049255 RCV001818648 RCV000888687 |
245 | N>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs61602805 CA357925217 |
245 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3049256 rs745306804 |
246 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA357925261 rs1428414992 |
247 | S>G | No |
ClinGen TOPMed |
|
|
rs746868176 CA3049259 |
247 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs186223016 CA103806255 |
248 | I>M | No |
ClinGen 1000Genomes |
|
|
CA357925301 rs1442955017 |
249 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA357925352 rs1267747731 |
251 | M>T | No |
ClinGen TOPMed |
|
|
rs1560933452 CA357925362 |
252 | K>Q | No |
ClinGen Ensembl |
|
|
rs1490788416 CA357925397 |
254 | S>Y | No |
ClinGen TOPMed |
|
|
rs1208393364 CA357925410 |
255 | R>T | No |
ClinGen gnomAD |
|
|
CA3049262 rs536947693 |
256 | P>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs536947693 CA103806281 |
256 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs373167325 CA3049263 |
257 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373167325 CA3049264 |
257 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA357925466 rs1396989691 |
258 | S>T | No |
ClinGen gnomAD |
|
|
rs1085307746 RCV000489724 |
260 | G>* | No |
ClinVar dbSNP |
|
|
CA3049266 rs771193812 |
261 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1309409695 CA357925580 |
264 | E>D | No |
ClinGen gnomAD |
|
|
CA3049267 rs774408363 |
264 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1027546928 CA103806309 |
265 | S>F | No |
ClinGen Ensembl |
|
|
rs900139242 CA103806334 |
266 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs900139242 CA357925603 |
266 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA357925625 rs1236585341 |
268 | P>A | No |
ClinGen gnomAD |
|
|
rs1260078099 CA357925635 |
269 | Q>K | No |
ClinGen gnomAD |
|
|
rs1446456403 CA357925643 |
269 | Q>R | No |
ClinGen gnomAD |
|
|
CA103806361 rs529243678 |
272 | C>F | No |
ClinGen Ensembl |
|
|
rs375829533 CA3049268 |
272 | C>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375829533 CA357925680 |
272 | C>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1554011775 CA3049271 CA3049270 |
273 | S>* | No |
ClinGen Ensembl |
|
|
CA3049269 rs767792487 |
273 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA103806408 rs201212143 |
276 | K>E | No |
ClinGen 1000Genomes |
|
|
CA3049279 rs764693485 |
276 | K>N | No |
ClinGen ExAC |
|
|
RCV000454270 rs1060499762 CA16609508 |
278 | K>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA357925778 rs757958464 |
278 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049280 rs757958464 |
278 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000117487 RCV001682816 CA153526 rs62317770 |
279 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3049282 rs201250325 |
279 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404330866 CA357925805 |
280 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs747933441 CA3049286 |
280 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA357925794 rs1560934176 |
280 | D>H | No |
ClinGen Ensembl |
|
|
CA357925815 rs1469018271 |
281 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
CA357925828 rs1331602086 |
282 | V>A | No |
ClinGen gnomAD |
|
|
rs1378570241 CA357925839 |
283 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3049288 rs201727777 |
284 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1023594873 CA103806509 |
285 | S>Y | No |
ClinGen Ensembl |
|
|
rs749413494 CA3049289 |
286 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1235297961 CA357925899 |
289 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs770950781 CA3049290 |
291 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357925931 rs774437783 |
291 | R>I | No |
ClinGen ExAC gnomAD |
|
|
rs774437783 CA3049291 |
291 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs577197566 CA3049292 |
292 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA357925940 rs1262562247 |
292 | T>K | No |
ClinGen TOPMed |
|
|
rs772265784 CA3049293 |
295 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA103806527 rs937970407 |
297 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA103806538 rs969327433 |
298 | S>N | No |
ClinGen Ensembl |
|
|
rs775781419 CA3049294 |
299 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs541057628 CA3049295 |
303 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA357926115 rs1171760413 |
305 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA357926117 rs1171760413 |
305 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs979666067 CA103806560 |
307 | A>G | No |
ClinGen Ensembl |
|
|
rs764744775 CA357926127 |
307 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA3049296 rs764744775 |
307 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA357926131 rs1390810521 |
308 | P>T | No |
ClinGen gnomAD |
|
|
CA103806580 rs866288154 |
309 | R>* | No |
ClinGen gnomAD |
|
|
rs371035787 CA3049298 |
309 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765820560 CA3049300 |
310 | S>* | No |
ClinGen ExAC |
|
|
CA3049301 rs751017218 |
312 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754655165 CA3049302 |
313 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1279819612 CA357926164 |
313 | K>R | No |
ClinGen gnomAD |
|
|
CA357926170 rs1225484345 |
314 | K>E | No |
ClinGen gnomAD |
|
|
rs767188889 CA3049303 |
314 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs777508785 CA3049306 |
317 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs375697987 CA3049304 |
317 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375697987 CA3049305 |
317 | Q>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1467322746 CA357926224 |
318 | K>Q | No |
ClinGen TOPMed |
|
|
CA3049310 rs757156044 |
320 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1422057182 CA357926260 |
320 | I>T | No |
ClinGen gnomAD |
|
|
rs1194886433 CA357926253 |
320 | I>V | No |
ClinGen gnomAD |
|
|
rs772240434 CA3049313 |
322 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1426020844 CA357926289 |
323 | E>K | No |
ClinGen gnomAD |
|
|
rs759582573 CA3049314 |
324 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049315 rs769173145 |
324 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs777079200 CA3049316 |
325 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA3049317 rs200072154 |
326 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA357926318 rs1181476610 |
326 | E>K | No |
ClinGen TOPMed |
|
|
CA3049318 rs765771089 |
328 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA103806685 rs900175358 |
328 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA357926353 rs1213096849 |
329 | K>R | No |
ClinGen gnomAD |
|
|
CA3049320 rs759067833 |
330 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA103806944 rs917902754 |
334 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
RCV000883471 CA3049363 rs200831675 |
334 | I>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs763729793 CA3049362 |
334 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049365 rs761645480 |
335 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1337864716 CA357926492 |
336 | I>F | No |
ClinGen TOPMed |
|
|
rs765125762 CA3049366 |
337 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs750405942 CA3049367 |
338 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049368 rs189806015 RCV000880134 |
338 | T>I | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA103806960 rs750405942 |
338 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs907718553 CA103806977 |
340 | E>G | No |
ClinGen TOPMed |
|
|
rs1479340992 CA357926533 |
340 | E>Q | No |
ClinGen gnomAD |
|
|
rs751686070 CA3049370 |
342 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA357926563 rs751686070 |
342 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs781544374 CA3049372 |
344 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA103806998 rs781544374 |
344 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1352821789 CA357926605 |
345 | G>E | No |
ClinGen gnomAD |
|
|
rs1033036917 CA103806999 |
345 | G>R | No |
ClinGen Ensembl |
|
|
rs1403834692 CA357926626 |
346 | D>E | No |
ClinGen TOPMed |
|
|
CA357926631 rs1442197288 |
347 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1395500200 CA357926675 |
349 | D>E | No |
ClinGen TOPMed |
|
|
CA3049375 rs770227975 |
349 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA357926683 rs1560936419 |
350 | S>N | No |
ClinGen Ensembl |
|
|
rs1560936419 CA357926686 |
350 | S>T | No |
ClinGen Ensembl |
|
|
rs1339709530 CA357926706 |
351 | S>C | No |
ClinGen gnomAD |
|
|
CA3049378 rs749819793 |
352 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771357243 CA3049380 |
353 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357926725 rs1560936538 |
353 | L>M | No |
ClinGen Ensembl |
|
|
rs1270344422 CA357926732 |
353 | L>S | No |
ClinGen gnomAD |
|
|
CA357926754 rs1276660431 |
354 | K>N | No |
ClinGen gnomAD |
|
|
rs1222510283 CA357926760 |
355 | T>P | No |
ClinGen gnomAD |
|
|
CA3049381 rs775043949 |
355 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs965500951 CA103807088 |
359 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA103807095 rs975850028 |
360 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs772451147 RCV001008338 |
363 | H>missing | No |
ClinVar dbSNP |
|
|
rs1578599298 CA357926973 |
367 | H>L | No |
ClinGen Ensembl |
|
|
rs768343315 CA3049387 |
372 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs931666699 CA103807166 |
373 | V>I | No |
ClinGen Ensembl |
|
|
rs1439916167 CA357927768 |
380 | S>P | No |
ClinGen TOPMed |
|
|
rs765102180 CA3049392 |
381 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA3049616 rs572590940 |
382 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs746681944 CA3049617 |
382 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs145790898 CA3049618 |
383 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769897611 CA103812325 |
387 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA103812332 rs950246805 |
391 | Y>C | No |
ClinGen Ensembl |
|
|
CA3049620 rs776549386 |
392 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA103812355 rs1045875182 |
393 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA357928733 rs1554012902 |
394 | L>I | No |
ClinGen Ensembl |
|
|
rs762926123 CA3049624 |
396 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA357928784 rs1205351474 |
398 | S>N | No |
ClinGen gnomAD |
|
|
rs766570275 CA357928794 |
399 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766570275 CA3049625 |
399 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1560943144 CA357928815 |
400 | A>V | No |
ClinGen Ensembl |
|
|
CA357928823 rs1187339699 |
401 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs751585535 CA3049626 |
401 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs755284502 CA3049629 |
403 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000442915 rs750946801 |
405 | T>missing | No |
ClinVar dbSNP |
|
|
rs767610310 CA3049630 |
405 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA357928886 rs1367669432 |
406 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs753142181 CA3049631 |
406 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1454058535 CA357928902 |
408 | Q>E | No |
ClinGen gnomAD |
|
|
CA357928982 rs1287998981 |
414 | E>Q | No |
ClinGen TOPMed |
|
|
CA357929004 rs1232976484 |
415 | M>T | No |
ClinGen TOPMed |
|
|
rs756461999 CA3049632 |
415 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs778066241 CA3049633 |
416 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs372796504 CA3049635 |
419 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1347079145 CA357929078 |
420 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1400515740 CA357929097 |
422 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1289765312 CA357929111 |
423 | Q>P | No |
ClinGen TOPMed |
|
|
CA357929130 rs1240137765 |
424 | N>K | No |
ClinGen gnomAD |
|
|
CA357929127 rs1321502751 |
424 | N>S | No |
ClinGen gnomAD |
|
|
CA357929122 rs1433339573 |
424 | N>Y | No |
ClinGen TOPMed |
|
|
rs192907075 CA3049636 |
425 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA103812490 rs906002669 |
425 | T>I | No |
ClinGen gnomAD |
|
|
rs192907075 CA357929133 |
425 | T>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA357929139 rs906002669 |
425 | T>S | No |
ClinGen gnomAD |
|
|
CA357929167 rs1243204754 |
427 | M>I | No |
ClinGen gnomAD |
|
|
CA357929160 rs534168966 |
427 | M>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3049637 rs534168966 |
427 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1484230924 CA357929182 |
429 | N>H | No |
ClinGen gnomAD |
|
|
CA357929194 rs1560943704 |
429 | N>K | No |
ClinGen Ensembl |
|
|
CA357929186 rs1484230924 |
429 | N>Y | No |
ClinGen gnomAD |
|
|
CA357929197 rs1180046429 |
430 | E>K | No |
ClinGen gnomAD |
|
|
CA357929336 rs751122588 |
433 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751122588 CA3049658 |
433 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA357929334 rs751122588 |
433 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049659 rs754477404 |
435 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1342856477 CA357929367 |
436 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3049661 rs368177589 |
437 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3049663 rs149590351 |
439 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs149590351 CA3049664 |
439 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3049665 rs771029477 |
439 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1328317325 CA357929445 |
441 | Q>P | No |
ClinGen TOPMed |
|
|
CA3049670 RCV000926266 rs566256110 |
446 | A>E | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
CA3049669 RCV000926265 rs550955686 |
446 | A>T | No |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
|
rs1429547228 CA357929522 |
447 | T>A | No |
ClinGen gnomAD |
|
|
rs760956381 CA3049671 |
448 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs754251488 CA3049674 |
449 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs759497392 CA103813329 |
450 | Q>P | No |
ClinGen TOPMed |
|
|
CA357929559 rs759497392 |
450 | Q>R | No |
ClinGen TOPMed |
|
|
CA3049679 rs202109173 |
452 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3049678 rs202109173 |
452 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs752239682 CA3049681 |
455 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA357929615 rs1578629482 |
455 | V>L | No |
ClinGen Ensembl |
|
|
rs1291740135 CA357929636 |
457 | V>E | No |
ClinGen gnomAD |
|
|
rs898290829 CA103813374 |
457 | V>L | No |
ClinGen Ensembl |
|
|
CA357929659 rs1219645038 |
459 | I>V | No |
ClinGen gnomAD |
|
|
CA3049684 rs376555622 |
463 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3049685 rs770868096 |
464 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs994278662 CA103813407 |
464 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs368562372 CA3049687 |
466 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3049686 rs778708751 |
466 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049689 rs144267849 |
467 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA554062777 rs1388859926 |
470 | Q>QFNT* | No |
ClinGen gnomAD |
|
|
rs1322495199 CA357929795 |
470 | Q>R | No |
ClinGen gnomAD |
|
|
CA357929818 rs1317929502 |
472 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs760724993 CA3049690 |
472 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1350063779 CA357931099 |
475 | L>S | No |
ClinGen gnomAD |
|
|
CA3049704 rs756863241 |
476 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA3049706 rs745664250 |
477 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs908063312 CA103815210 |
478 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1385033451 CA357931182 |
479 | S>* | No |
ClinGen TOPMed |
|
|
CA3049709 rs375611304 |
482 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776635993 CA3049711 |
483 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA3049710 rs768746321 |
483 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA103815235 rs939497545 |
489 | G>R | No |
ClinGen TOPMed |
|
|
rs148722939 CA3049713 |
490 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1291008973 CA357931514 |
492 | E>A | No |
ClinGen gnomAD |
|
|
rs1308482329 CA357931547 |
494 | H>Y | No |
ClinGen gnomAD |
|
|
CA357931562 rs1456703436 |
495 | A>T | No |
ClinGen TOPMed |
|
|
rs1352102849 CA357931574 |
496 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs773496610 CA3049714 |
499 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA357931629 rs1560950271 |
499 | T>S | No |
ClinGen Ensembl |
|
|
rs1451455809 CA357931692 |
503 | A>T | No |
ClinGen gnomAD |
|
|
rs763343337 CA3049715 |
505 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA357931730 rs1446100498 |
506 | V>A | No |
ClinGen TOPMed |
|
|
rs766609841 CA3049716 |
508 | N>T | No |
ClinGen ExAC gnomAD |
|
|
rs775018729 CA3049717 |
509 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775018729 CA3049718 |
509 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1187394815 CA357931784 |
510 | Y>D | No |
ClinGen TOPMed |
|
|
CA357931807 rs1263744187 |
511 | T>I | No |
ClinGen TOPMed |
|
|
CA357931873 rs764923565 |
515 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049722 rs764923565 |
515 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484251782 CA357931912 |
517 | H>Y | No |
ClinGen gnomAD |
|
|
rs1203406527 CA357931939 |
518 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA103815272 rs1044070452 |
519 | W>R | No |
ClinGen Ensembl |
|
|
rs1249430625 CA357931987 |
520 | K>E | No |
ClinGen gnomAD |
|
|
CA3049724 rs750228758 |
520 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1200442432 CA357932013 |
521 | L>P | No |
ClinGen gnomAD |
|
|
rs369220092 CA3049726 |
522 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA357932039 rs1169156956 |
523 | I>F | No |
ClinGen gnomAD |
|
|
rs746962163 CA3049727 |
525 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA357932265 rs1363037422 |
529 | E>K | No |
ClinGen TOPMed |
|
|
rs1422295652 CA357932311 |
532 | Y>C | No |
ClinGen TOPMed |
|
|
CA357932352 rs1322713718 |
535 | K>E | No |
ClinGen gnomAD |
|
|
rs1247378702 CA357932400 |
538 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
RCV000485984 rs755439936 |
542 | A>missing | No |
ClinVar dbSNP |
|
|
rs202188434 CA3049760 |
542 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3049761 rs202188434 |
542 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs202188434 CA3049762 |
542 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1169594830 CA357932471 |
544 | L>R | No |
ClinGen TOPMed |
|
|
rs769360149 CA3049763 |
545 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs183137563 CA103815889 |
546 | Q>* | No |
ClinGen 1000Genomes |
|
|
CA357932495 rs1463542627 |
546 | Q>L | No |
ClinGen gnomAD |
|
|
CA3049764 rs373823878 |
548 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1429060702 CA357932512 |
548 | R>W | No |
ClinGen TOPMed |
|
|
rs762734597 CA3049765 |
549 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1162393127 CA357932533 |
550 | K>E | No |
ClinGen gnomAD |
|
|
CA357932567 rs1578646740 |
552 | R>T | No |
ClinGen Ensembl |
|
|
rs1461105401 CA357932584 |
553 | G>D | No |
ClinGen gnomAD |
|
|
rs751393896 CA3049767 |
554 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1260190511 CA357932613 |
556 | K>E | No |
ClinGen gnomAD |
|
|
rs759357680 CA3049768 |
556 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1209716424 CA357933152 |
558 | I>T | No |
ClinGen TOPMed |
|
|
CA103817319 rs201586811 |
561 | A>D | No |
ClinGen 1000Genomes |
|
|
rs1560956820 CA357933212 |
563 | K>E | No |
ClinGen Ensembl |
|
|
CA357933227 rs1172596484 |
564 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3049798 rs767346027 |
566 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs767346027 CA3049799 |
566 | L>Q | No |
ClinGen ExAC gnomAD |
|
|
rs760720635 CA3049800 |
568 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA357933295 rs1353582035 |
570 | Q>* | No |
ClinGen TOPMed |
|
|
CA357933322 rs1206982758 |
572 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA357933317 rs1483273617 |
572 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1206982758 CA357933326 |
572 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1468779415 CA357933335 |
573 | S>N | No |
ClinGen gnomAD |
|
|
rs1283172356 CA357933340 |
574 | K>E | No |
ClinGen TOPMed |
|
|
rs368130427 CA3049803 |
575 | H>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs369296762 CA3049805 |
576 | I>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369296762 CA103817361 |
576 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA103817352 rs1021428530 |
576 | I>V | No |
ClinGen TOPMed |
|
|
rs374867509 CA3049806 |
577 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA357933413 rs1430842708 |
579 | S>F | No |
ClinGen gnomAD |
|
|
CA357933445 rs1310211815 |
581 | Y>* | No |
ClinGen gnomAD |
|
|
rs1293684793 CA357933458 |
582 | D>E | No |
ClinGen gnomAD |
|
|
CA357933453 rs1441017843 |
582 | D>G | No |
ClinGen gnomAD |
|
|
CA357933447 rs1352459272 |
582 | D>N | No |
ClinGen gnomAD |
|
|
CA554064885 rs1464759474 |
583 | D>= | No |
ClinGen gnomAD |
|
|
rs1560957160 CA357933460 |
583 | D>R | No |
ClinGen Ensembl |
|
|
rs1369117971 CA357933474 |
583 | D>W | No |
ClinGen gnomAD |
1 associated diseases with Q4G0J3
[MIM: 615071]: Alazami syndrome (ALAZS)
A syndromic form of primordial dwarfism, a condition characterized by severe growth restriction that has its onset in utero, and results in short stature and undersize. ALAZS patients manifest severe intellectual disability and distinct facial features including malar hypoplasia, deep-set eyes, broad nose, short philtrum, and macrostomia. Some patients have non-specific and inconsistent skeletal findings, for example, scoliosis and mild epiphyseal changes in the proximal phalanges, but no frank dysplasia. {ECO:0000269|PubMed:21937992, ECO:0000269|PubMed:22865833, ECO:0000269|PubMed:26374271, ECO:0000269|PubMed:27766953, ECO:0000269|PubMed:29576627, ECO:0000269|PubMed:29619239, ECO:0000269|PubMed:30006060, ECO:0000269|PubMed:32017898}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A syndromic form of primordial dwarfism, a condition characterized by severe growth restriction that has its onset in utero, and results in short stature and undersize. ALAZS patients manifest severe intellectual disability and distinct facial features including malar hypoplasia, deep-set eyes, broad nose, short philtrum, and macrostomia. Some patients have non-specific and inconsistent skeletal findings, for example, scoliosis and mild epiphyseal changes in the proximal phalanges, but no frank dysplasia. {ECO:0000269|PubMed:21937992, ECO:0000269|PubMed:22865833, ECO:0000269|PubMed:26374271, ECO:0000269|PubMed:27766953, ECO:0000269|PubMed:29576627, ECO:0000269|PubMed:29619239, ECO:0000269|PubMed:30006060, ECO:0000269|PubMed:32017898}. Note=The disease is caused by variants affecting the gene represented in this entry.
6 regional properties for Q4G0J3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RNA recognition motif domain | 125 - 202 | IPR000504 |
| domain | La-type HTH domain | 28 - 122 | IPR006630 |
| domain | La protein, xRRM domain | 450 - 563 | IPR014886 |
| domain | LARP7, RNA recognition motif 1 | 126 - 205 | IPR034887 |
| domain | LARP7, RNA recognition motif 2 | 454 - 535 | IPR034910 |
| domain | La-related protein 7, La domain | 30 - 111 | IPR034946 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| 7SK snRNP | A ribonucleoprotein complex that contains the 7SK snRNA. The 7SK snRNP plays a central role in RNA polymerase II elongation control by regulating the availability of active P-TEFb. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| ribonucleoprotein complex | A macromolecular complex that contains both RNA and protein molecules. |
| small nuclear ribonucleoprotein complex | A ribonucleoprotein complex that contains at least one RNA of the small nuclear RNA (snRNA) class and as well as its associated proteins. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP, U4/U6 snRNP, or 7SK snRNP. Many, of these complexes become part of the spliceosome involved in splicing of nuclear mRNAs. Others are involved in regulation of transcription elongation or 3'-end processing of replication-dependent histone pre-mRNAs. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| 7SK snRNA binding | Binding to a 7SK small nuclear RNA (7SK snRNA). |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| U6 snRNA binding | Binding to a U6 small nuclear RNA (U6 snRNA). |
12 GO annotations of biological process
| Name | Definition |
|---|---|
| box C/D RNA 3'-end processing | Any process involved in forming the mature 3' end of a box C/D RNA molecule. |
| cell differentiation | The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. |
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
| negative regulation of transcription elongation by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II. |
| negative regulation of viral transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of viral transcription. |
| positive regulation of protein localization to Cajal body | Any process that activates or increases the frequency, rate or extent of protein localization to Cajal body. |
| positive regulation of snRNA transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II. |
| regulation of mRNA splicing, via spliceosome | Any process that modulates the frequency, rate or extent of mRNA splicing via a spliceosomal mechanism. |
| RNA splicing | The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. |
| spermatogenesis | The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa. |
| U6 2'-O-snRNA methylation | The posttranscriptional addition a methyl group to the 2'-oxygen atom of a nucleotide residue in an U6 snRNA molecule. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P05455 | SSB | Lupus La protein | Homo sapiens (Human) | PR |
| Q71RC2 | LARP4 | La-related protein 4 | Homo sapiens (Human) | PR |
| Q6PKG0 | LARP1 | La-related protein 1 | Homo sapiens (Human) | PR |
| Q659C4 | LARP1B | La-related protein 1B | Homo sapiens (Human) | PR |
| Q05CL8 | Larp7 | La-related protein 7 | Mus musculus (Mouse) | PR |
| Q5XI01 | Larp7 | La-related protein 7 | Rattus norvegicus (Rat) | PR |
| Q93ZV7 | LA1 | La protein 1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| METESGNQEK | VMEEESTEKK | KEVEKKKRSR | VKQVLADIAK | QVDFWFGDAN | LHKDRFLREQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IEKSRDGYVD | ISLLVSFNKM | KKLTTDGKLI | ARALRSSAVV | ELDLEGTRIR | RKKPLGERPK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DEDERTVYVE | LLPKNVNHSW | IERVFGKCGN | VVYISIPHYK | STGDPKGFAF | VEFETKEQAA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KAIEFLNNPP | EEAPRKPGIF | PKTVKNKPIP | ALRVVEEKKK | KKKKKGRMKK | EDNIQAKEEN |
| 250 | 260 | 270 | 280 | 290 | 300 |
| MDTSNTSISK | MKRSRPTSEG | SDIESTEPQK | QCSKKKKKRD | RVEASSLPEV | RTGKRKRSSS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EDAESLAPRS | KVKKIIQKDI | IKEASEASKE | NRDIEISTEE | EKDTGDLKDS | SLLKTKRKHK |
| 370 | 380 | 390 | 400 | 410 | 420 |
| KKHKERHKMG | EEVIPLRVLS | KSEWMDLKKE | YLALQKASMA | SLKKTISQIK | SESEMETDSG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VPQNTGMKNE | KTANREECRT | QEKVNATGPQ | FVSGVIVKII | STEPLPGRKQ | VRDTLAAISE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VLYVDLLEGD | TECHARFKTP | EDAQAVINAY | TEINKKHCWK | LEILSGDHEQ | RYWQKILVDR |
| 550 | 560 | 570 | 580 | ||
| QAKLNQPREK | KRGTEKLITK | AEKIRLAKTQ | QASKHIRFSE | YD |