Q3SZ25
Gene name |
EED |
Protein name |
Polycomb protein EED |
Names |
|
Species |
Bos taurus (Bovine) |
KEGG Pathway |
bta:404183 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q3SZ25
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q3SZ25-F1 | Predicted | AlphaFoldDB |
39 variants for Q3SZ25
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs469292650 | 4 | R>S | No | EVA | |
| rs446047049 | 6 | V>G | No | EVA | |
| rs481486201 | 15 | M>I | No | EVA | |
| rs446981904 | 15 | M>K | No | EVA | |
| rs461570316 | 16 | P>A | No | EVA | |
| rs461570316 | 16 | P>T | No | EVA | |
| rs459250095 | 27 | E>G | No | EVA | |
| rs439042201 | 28 | N>I | No | EVA | |
| rs470622562 | 28 | N>K | No | EVA | |
| rs459947421 | 30 | N>I | No | EVA | |
| rs474490946 | 36 | D>Y | No | EVA | |
| rs454617020 | 38 | N>T | No | EVA | |
| rs438438853 | 48 | T>S | No | EVA | |
| rs479622326 | 49 | N>D | No | EVA | |
| rs468487897 | 116 | V>L | No | EVA | |
| rs446057224 | 142 | D>G | No | EVA | |
| rs463063907 | 142 | D>N | No | EVA | |
| rs798136478 | 151 | A>V | No | EVA | |
| rs462588505 | 177 | P>T | No | EVA | |
| rs440658859 | 243 | D>G | No | EVA | |
| rs472253133 | 247 | L>F | No | EVA | |
| rs476106478 | 258 | H>L | No | EVA | |
| rs441742275 | 258 | H>Y | No | EVA | |
| rs456223928 | 261 | K>R | No | EVA | |
| rs461221241 | 288 | P>T | No | EVA | |
| rs452511588 | 300 | S>A | No | EVA | |
| rs456904194 | 378 | A>T | No | EVA | |
| rs443216581 | 381 | N>I | No | EVA | |
| rs443216581 | 381 | N>S | No | EVA | |
| rs471669910 | 383 | V>G | No | EVA | |
| rs465791759 | 384 | G>A | No | EVA | |
| rs434727951 | 384 | G>C | No | EVA | |
| rs435632653 | 385 | K>Q | No | EVA | |
| rs450033761 | 386 | L>P | No | EVA | |
| rs478262070 | 390 | D>A | No | EVA | |
| rs464817600 | 395 | D>Y | No | EVA | |
| rs468889309 | 414 | R>P | No | EVA | |
| rs483213820 | 421 | D>Y | No | EVA | |
| rs464660462 | 433 | S>G | No | EVA |
No associated diseases with Q3SZ25
6 regional properties for Q3SZ25
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | WD40 repeat | 81 - 125 | IPR001680-1 |
| repeat | WD40 repeat | 131 - 176 | IPR001680-2 |
| repeat | WD40 repeat | 179 - 273 | IPR001680-3 |
| repeat | WD40 repeat | 295 - 332 | IPR001680-4 |
| repeat | WD40 repeat | 397 - 438 | IPR001680-5 |
| conserved_site | WD40 repeat, conserved site | 206 - 220 | IPR019775 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| ESC/E(Z) complex | A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12. In mammals the core subunits of the complex include EED, EZH2, SUZ12 and RBBP4. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| enzyme activator activity | Binds to and increases the activity of an enzyme. |
| histone methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + histone = S-adenosyl-L-homocysteine + methyl-histone. Histone methylation generally occurs on either an arginine or lysine residue. |
| identical protein binding | Binding to an identical protein or proteins. |
| transcription corepressor binding | Binding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions between repressing transcription factors and the basal transcription machinery. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| chromatin organization | The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA. |
| negative regulation of transcription by RNA polymerase II | Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5ZKH3 | EED | Polycomb protein EED | Gallus gallus (Chicken) | PR |
| O75530 | EED | Polycomb protein EED | Homo sapiens (Human) | PR |
| Q921E6 | Eed | Polycomb protein EED | Mus musculus (Mouse) | PR |
| Q28DT7 | eed | Polycomb protein eed | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| Q566T0 | eed | Polycomb protein eed | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSEREVSTVP | AGTDMPAAKK | QKLSSDENSN | PDLSGDENDD | AVSIESGTNT | ERPDTPTNTP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NAPGRKSWGK | GKWKSKKCKY | SFKCVNSLKE | DHNQPLFGVQ | FNWHSKEGDP | LVFATVGSNR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VTLYECHSQG | EIRLLQSYVD | ADADENFYTC | AWTYDSNTSH | PLLAVAGSRG | IIRIINPITM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QCIKHYVGHG | NAINELKFHP | RDPNLLLSVS | KDHALRLWNI | QTDTLVAIFG | GVEGHRDEVL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SADYDLLGEK | IMSCGMDHSL | KLWRINSKRM | MNAIKESYDY | NPNKTNRPFI | SQKIHFPDFS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TRDIHRNYVD | CVRWLGDLIL | SKSCENAIVC | WKPGKMEDDI | DKIKPSESNV | TILGRFDYSQ |
| 370 | 380 | 390 | 400 | 410 | 420 |
| CDIWYMRFSM | DFWQKMLALG | NQVGKLYVWD | LEVEDPHKAK | CTTLTHHKCG | AAIRQTSFSR |
| 430 | 440 | ||||
| DSSILIAVCD | DASIWRWDRL | R |