Q9Y2C4
Gene name |
EXOG (ENDOGL1, ENDOGL2, ENGL) |
Protein name |
Nuclease EXOG, mitochondrial |
Names |
Endonuclease G-like 1, Endo G-like 1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:9941 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
11 structures for Q9Y2C4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4A1N | X-ray | 280 A | A | 42-368 | PDB |
| 5T3V | X-ray | 260 A | A/B | 59-368 | PDB |
| 5T40 | X-ray | 181 A | A/B | 59-368 | PDB |
| 5T4I | X-ray | 239 A | A/B | 59-368 | PDB |
| 5T5C | X-ray | 185 A | A/B | 59-368 | PDB |
| 5ZKI | X-ray | 232 A | A/B | 42-368 | PDB |
| 5ZKJ | X-ray | 280 A | A/B | 42-368 | PDB |
| 6IID | X-ray | 299 A | A/B/C/D | 42-368 | PDB |
| 7R6T | X-ray | 290 A | C/D/L | 58-368 | PDB |
| 7R6V | X-ray | 216 A | D/E/G/I | 58-368 | PDB |
| AF-Q9Y2C4-F1 | Predicted | AlphaFoldDB |
313 variants for Q9Y2C4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA352135782 rs766723778 |
2 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766723778 CA2319136 |
2 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319139 rs767742733 |
3 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA2319140 rs767742733 |
3 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs916982789 CA72934915 |
3 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA2319143 rs765146335 |
4 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
TCGA novel rs750383065 CA352135796 |
4 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen ExAC TOPMed gnomAD |
|
CA72934931 rs1025061181 |
4 | K>R | No |
ClinGen TOPMed |
|
|
CA352135803 rs1262508909 |
5 | S>R | No |
ClinGen gnomAD |
|
|
rs371857709 CA2319145 |
6 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201317819 CA2319146 |
7 | A>G | No |
ClinGen ESP ExAC TOPMed |
|
|
CA352135820 rs1262545431 |
8 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1206767077 CA352135817 |
8 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs751348639 CA2319148 |
9 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs751348639 CA2319149 |
9 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA2319150 rs780830129 |
9 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA2319152 rs371730440 |
10 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA352135828 rs1270360933 |
10 | L>R | No |
ClinGen TOPMed |
|
|
rs1222043396 CA352135832 |
11 | R>P | No |
ClinGen TOPMed |
|
|
rs778315577 CA2319153 |
11 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs938305955 CA72934944 |
12 | G>D | No |
ClinGen Ensembl |
|
|
CA352135835 rs1344802518 |
12 | G>R | No |
ClinGen TOPMed |
|
|
CA2319154 rs142607341 |
13 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs989147841 CA72934950 |
14 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs989147841 CA352135845 |
14 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA352135847 rs1317734651 |
14 | R>P | No |
ClinGen TOPMed |
|
|
rs989147841 CA352135844 |
14 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs140624245 CA72934957 |
15 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140624245 CA2319155 |
15 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA352135849 rs1559668450 |
15 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs140624245 CA2319156 |
15 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1189997032 CA352135863 |
17 | L>P | No |
ClinGen gnomAD |
|
|
CA352135861 rs1391072627 |
17 | L>V | No |
ClinGen TOPMed |
|
|
CA2319158 rs759832007 |
18 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368855859 CA352135872 |
19 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA72934964 rs368855859 |
19 | G>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA352135882 rs200468418 |
20 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138226578 CA2319159 |
20 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA352135886 rs1575599513 |
21 | V>L | No |
ClinGen Ensembl |
|
|
rs760734069 CA2319161 |
22 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1241137686 CA352135894 |
22 | A>V | No |
ClinGen gnomAD |
|
|
rs764205454 CA2319162 |
23 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1388687695 CA352135898 |
23 | G>V | No |
ClinGen gnomAD |
|
|
CA72934978 rs138933023 |
24 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1450846128 CA352135904 |
24 | A>V | No |
ClinGen TOPMed |
|
|
COSM1537967 CA2319165 rs766378816 |
25 | V>A | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2319164 rs763005298 |
25 | V>I | No |
ClinGen ExAC |
|
|
rs149413458 CA2319166 CA72934981 |
26 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1342069512 CA352135916 |
27 | G>D | No |
ClinGen TOPMed |
|
|
CA352135924 rs1421214786 |
28 | A>V | No |
ClinGen gnomAD |
|
|
CA352135930 rs1183224498 |
29 | A>V | No |
ClinGen gnomAD |
|
|
CA352135942 rs1363711473 |
31 | A>G | No |
ClinGen gnomAD |
|
|
rs754739929 CA2319168 |
32 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319169 rs370106287 |
33 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1313168955 CA352135958 |
34 | A>G | No |
ClinGen TOPMed |
|
|
rs1452204884 CA352135964 |
35 | A>V | No |
ClinGen TOPMed |
|
|
CA2319170 rs752387567 |
36 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352135972 rs1365282024 |
37 | Q>P | No |
ClinGen gnomAD |
|
|
rs1392899983 CA352135986 |
39 | F>L | No |
ClinGen gnomAD |
|
|
rs755617306 CA2319171 |
40 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs777288999 CA352136000 |
41 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777288999 CA2319172 |
41 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352136004 rs1559668831 |
42 | Q>K | No |
ClinGen Ensembl |
|
|
CA352136008 rs1351651239 |
42 | Q>R | No |
ClinGen TOPMed |
|
|
CA352136015 rs748759280 |
43 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA2319173 rs748759280 |
43 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs779339742 CA2319175 |
47 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779339742 CA72935002 |
47 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319176 rs746276326 |
47 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1196743207 CA352136044 |
48 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA2319178 rs775615944 |
48 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA352136050 rs373135233 |
49 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373135233 CA2319179 |
49 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2319181 rs377680068 |
52 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA352136075 rs766432267 |
53 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs766432267 CA2319183 |
53 | P>Q | No |
ClinGen ExAC gnomAD |
|
|
CA2319185 rs759312453 |
54 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751524406 CA352136077 |
54 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759312453 CA352136080 |
54 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319184 rs751524406 |
54 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767309530 CA2319186 |
55 | G>* | No |
ClinGen ExAC gnomAD |
|
|
rs1284600920 CA352136290 |
56 | S>F | No |
ClinGen gnomAD |
|
|
CA352136295 rs1575603506 |
57 | A>S | No |
ClinGen Ensembl |
|
| TCGA novel | 58 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2319244 rs776317117 |
58 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA72935593 rs140622584 |
58 | E>K | No |
ClinGen Ensembl |
|
|
CA2319245 rs761478168 |
59 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs764753657 CA2319246 |
60 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA352136328 rs1189457031 |
60 | A>V | No |
ClinGen gnomAD |
|
|
rs143230353 CA2319249 |
61 | V>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2319248 rs560667106 |
61 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA72935613 rs199775427 |
65 | F>L | No |
ClinGen Ensembl |
|
|
CA352136375 rs1349344410 |
65 | F>Y | No |
ClinGen TOPMed |
|
|
rs755433361 CA2319251 |
67 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1426820462 CA352136397 |
67 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1345325526 CA352136420 |
69 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 70 | T>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352136431 rs1434747971 |
71 | G>R | No |
ClinGen gnomAD |
|
|
rs1281846602 CA352136439 |
71 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 72 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1374695700 CA352136473 |
75 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA2319253 rs546390344 |
76 | C>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs756411847 CA2319254 |
76 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138059665 CA2319255 |
77 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA72935631 rs995294003 |
79 | N>Y | No |
ClinGen TOPMed |
|
|
CA352136526 rs1456612831 |
80 | H>D | No |
ClinGen gnomAD |
|
|
CA2319259 rs770911980 |
81 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319258 rs770911980 |
81 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352136542 rs1234330759 |
81 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 83 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352136573 rs746929875 |
84 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs566505876 CA2319261 |
85 | D>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs566505876 CA352136581 |
85 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374345917 CA2319262 |
86 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374345917 CA72935650 |
86 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA352136597 rs1446493827 |
87 | A>T | No |
ClinGen gnomAD |
|
|
rs376947496 CA2319263 |
87 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2319265 rs371616022 |
89 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs182008971 CA2319266 |
89 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2319264 rs371616022 COSM730982 |
89 | R>W | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1412818124 CA352136621 |
90 | V>M | No |
ClinGen TOPMed |
|
|
CA2319268 rs200431618 |
93 | W>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs760141544 CA2319269 |
93 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1329868810 CA352136660 |
94 | V>I | No |
ClinGen gnomAD |
|
|
rs368410145 CA2319270 |
95 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 95 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352136694 rs1315392303 |
97 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1247520617 CA352136691 |
97 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA72935671 COSM730981 rs866211020 |
99 | S>F | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA2319271 rs753128477 |
100 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1226205382 CA352136739 |
101 | S>R | No |
ClinGen gnomAD |
|
|
rs756422989 CA2319272 |
104 | M>K | No |
ClinGen ExAC gnomAD |
|
|
CA2319308 rs774135514 |
108 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA352137249 rs1298985572 |
109 | R>S | No |
ClinGen TOPMed |
|
|
CA72937840 rs1044836985 |
110 | K>Q | No |
ClinGen gnomAD |
|
|
CA352137268 rs1244271354 |
111 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1249075021 CA352137285 |
112 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs866655619 CA72937841 |
116 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs200655025 CA2319310 |
117 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319311 rs771677731 |
118 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319312 rs776188991 |
122 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319315 rs746023160 |
123 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs746023160 CA72937849 |
123 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs764626582 CA2319314 |
123 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs202058731 TCGA novel CA2319316 |
125 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC gnomAD NCI-TCGA |
|
CA2319317 rs765498225 |
126 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs200753937 COSM3392376 CA2319318 |
128 | N>S | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1171374442 CA352137484 |
131 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA2319319 rs758510435 |
132 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766423067 CA2319320 |
135 | G>E | No |
ClinGen ExAC gnomAD |
|
|
COSM2986323 CA2319322 rs756034502 |
138 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs777698117 CA2319323 |
138 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1281281168 CA352137555 |
139 | G>R | No |
ClinGen TOPMed |
|
|
rs1166874238 CA352137584 |
141 | M>I | No |
ClinGen gnomAD |
|
|
rs1310818500 CA352137605 |
144 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 147 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 149 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM350865 rs955544107 CA72937861 |
150 | S>* | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs955544107 CA352137672 |
150 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA2319324 rs749096148 |
151 | S>N | No |
ClinGen ExAC |
|
|
CA352131693 rs750207184 |
154 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs750207184 CA2319347 |
154 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs758132416 CA2319348 |
155 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs758132416 CA2319349 |
155 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA352131766 rs1409438450 |
157 | T>A | No |
ClinGen Ensembl |
|
|
CA2319351 rs768205374 |
157 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1271972213 CA352131790 |
158 | F>S | No |
ClinGen gnomAD |
|
|
rs1425781368 CA352131786 |
158 | F>V | No |
ClinGen gnomAD |
|
|
rs1174063660 CA352131842 |
159 | Y>* | No |
ClinGen gnomAD |
|
|
CA2319353 rs748628365 |
159 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs770236852 CA2319354 |
160 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA2319355 rs369327477 |
162 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2319357 rs560692717 |
163 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA2319356 rs763234816 |
163 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352131959 rs1559678719 |
164 | V>M | No |
ClinGen Ensembl |
|
|
rs774629674 CA2319358 |
165 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138712791 CA2319359 |
175 | W>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs113164971 CA72917100 |
176 | N>S | No |
ClinGen Ensembl |
|
|
rs1290369952 CA352132673 |
178 | I>K | No |
ClinGen gnomAD |
|
|
rs1470696418 CA352132655 |
178 | I>L | No |
ClinGen TOPMed |
|
|
rs200057424 CA2319376 |
180 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs201551336 CA2319377 |
181 | Y>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs532343012 CA2319380 |
182 | C>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2319378 rs771296937 |
182 | C>G | No |
ClinGen ExAC |
|
|
CA2319379 rs532343012 |
182 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs758597013 CA72918055 |
183 | R>* | No |
ClinGen gnomAD |
|
|
CA72918059 rs1050050130 |
183 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1433122064 CA352133828 |
190 | E>K | No |
ClinGen TOPMed |
|
|
CA2319381 rs772146422 |
191 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA2319382 rs775647946 |
192 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1215699412 CA352133903 |
193 | W>S | No |
ClinGen TOPMed |
|
|
CA2319383 rs760783454 |
195 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA72918066 rs545271948 |
197 | G>R | No |
ClinGen gnomAD |
|
|
CA72918074 rs889305417 |
198 | P>S | No |
ClinGen TOPMed |
|
|
COSM1537966 rs773281511 CA2319387 |
203 | Q>* | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1401668022 CA352134125 |
204 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs942189583 CA72918079 |
205 | R>T | No |
ClinGen TOPMed |
|
|
CA352134189 rs367875999 |
207 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1044223 CA72918081 rs367875999 |
207 | D>N | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2319389 rs367875999 |
207 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319390 rs546115446 |
209 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA352134270 rs1559682668 |
211 | I>V | No |
ClinGen Ensembl |
|
|
CA352134296 rs1318520499 |
213 | S>G | No |
ClinGen TOPMed |
|
| rs771911750 | 213 | S>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2319392 rs754690589 |
214 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352136099 rs1575682317 |
216 | V>G | No |
ClinGen Ensembl |
|
|
rs775217576 CA2319431 |
216 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA2319434 rs753405481 |
219 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319435 rs141793543 |
222 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs376463901 CA2319436 |
223 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2319437 rs750867206 |
225 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA352136154 rs1449088173 |
225 | P>S | No |
ClinGen gnomAD |
|
|
rs1267643669 CA352136186 |
230 | K>E | No |
ClinGen gnomAD |
|
|
rs965069728 CA72924909 |
231 | V>E | No |
ClinGen TOPMed |
|
|
rs1237099969 CA542615515 |
232 | I>* | No |
ClinGen gnomAD |
|
|
rs755253280 CA2319441 |
234 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA2319442 rs781505556 |
235 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748315238 CA2319443 |
235 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319444 rs748315238 |
235 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352136241 rs781505556 |
235 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319445 rs139945103 |
237 | S>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs745816605 CA2319446 |
239 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1319815888 CA352136292 |
241 | T>A | No |
ClinGen gnomAD |
|
|
rs1319815888 CA352136294 |
241 | T>P | No |
ClinGen gnomAD |
|
|
rs1156354152 CA352136301 |
241 | T>S | No |
ClinGen gnomAD |
|
|
COSM256883 rs368056983 CA2319448 |
242 | E>K | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1270425603 CA352136333 |
243 | P>L | No |
ClinGen TOPMed |
|
|
CA72924927 rs760406268 |
245 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1162359848 CA352136354 |
245 | A>P | No |
ClinGen gnomAD |
|
|
CA2319449 rs760406268 |
245 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1437488810 CA352136374 |
246 | L>P | No |
ClinGen Ensembl |
|
|
CA2319450 rs768357746 |
247 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1414769082 CA352136398 |
248 | A>P | No |
ClinGen TOPMed |
|
|
CA2319451 rs776145416 |
248 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA72924935 rs771208231 |
252 | P>R | No |
ClinGen gnomAD |
|
|
CA2319452 rs761430825 |
252 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319453 rs140085659 COSM2986330 |
253 | N>S | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA352136560 rs1320422127 |
257 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1476246520 CA352136574 |
258 | F>L | No |
ClinGen TOPMed |
|
|
rs1575682924 CA352136602 |
259 | Q>P | No |
ClinGen Ensembl |
|
|
rs766922825 CA2319456 |
260 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319457 rs751984250 |
261 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751984250 CA352136638 |
261 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352136640 rs751984250 |
261 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA72924961 rs748104607 |
262 | L>* | No |
ClinGen Ensembl |
|
|
CA352136653 rs1575683012 |
262 | L>V | No |
ClinGen Ensembl |
|
|
CA352136678 rs1486034583 |
263 | T>S | No |
ClinGen gnomAD |
|
|
CA2319458 rs148926505 |
264 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA352136783 rs200547739 |
268 | S>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2319461 rs200547739 |
268 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA72924981 rs760168047 |
269 | L>F | No |
ClinGen Ensembl |
|
|
rs1482447113 CA352136798 |
270 | Q>R | No |
ClinGen TOPMed |
|
|
rs756312122 CA2319463 |
271 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA72924988 rs1027842320 |
272 | L>I | No |
ClinGen gnomAD |
|
|
rs1402987888 CA352136814 |
273 | E>Q | No |
ClinGen gnomAD |
|
|
CA2319465 VAR_044320 rs1141223 |
277 | G>V | abolishes catalytic activity [UniProt] | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA352136862 rs1306488810 |
280 | F>C | No |
ClinGen gnomAD |
|
|
CA2319468 rs746874812 |
280 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA352136883 rs1257449218 |
283 | H>R | No |
ClinGen gnomAD |
|
|
CA2319470 rs768412763 |
285 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs768412763 CA352136898 TCGA novel |
285 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA ExAC gnomAD |
|
CA352136901 rs1209574386 |
286 | R>G | No |
ClinGen gnomAD |
|
|
rs1233204604 CA352136915 |
288 | S>G | No |
ClinGen TOPMed |
|
|
CA2319471 rs186221013 |
290 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs117281323 CA2319473 |
291 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs141204185 CA2319472 |
291 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377188439 CA2319475 |
292 | N>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs767049492 CA2319476 |
296 | V>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs774992455 CA2319477 |
298 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs200166949 CA2319478 |
298 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2319479 rs767751233 |
299 | C>G | No |
ClinGen ExAC gnomAD |
|
|
CA352136986 rs1373279118 |
299 | C>Y | No |
ClinGen gnomAD |
|
|
rs1559703501 CA352136997 |
300 | K>N | No |
ClinGen Ensembl |
|
|
CA352136995 rs1401147850 |
300 | K>R | No |
ClinGen gnomAD |
|
|
rs1360293530 CA352137027 |
305 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA352137028 rs1360293530 |
305 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1419860903 CA352137031 |
305 | Q>R | No |
ClinGen TOPMed |
|
| TCGA novel | 306 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753978794 CA2319483 |
309 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA2319484 rs757328029 |
316 | I>S | No |
ClinGen ExAC gnomAD |
|
|
CA352137128 rs754865006 |
319 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA2319487 rs754865006 |
319 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs746931625 CA2319486 |
319 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs575712682 COSM302160 CA2319488 |
320 | R>* | central_nervous_system urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs570781004 CA352137132 |
320 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2319489 rs570781004 COSM3427551 |
320 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA72925041 rs915324349 |
321 | S>L | No |
ClinGen Ensembl |
|
|
rs1171768593 CA352137180 |
328 | I>F | No |
ClinGen gnomAD |
|
|
CA2319492 rs377143401 |
329 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1753191 rs1382241022 CA352137190 |
329 | M>V | urinary_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA352137216 rs1158547811 |
330 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA72925048 rs551844651 |
331 | N>D | No |
ClinGen 1000Genomes |
|
|
CA72925049 rs945456711 |
334 | N>Y | No |
ClinGen gnomAD |
|
|
rs770533057 CA2319493 |
335 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA2319494 rs146039478 |
336 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs760151983 CA2319495 |
337 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA2319496 rs768000987 |
339 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs775732431 CA2319497 |
340 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2319498 rs761089379 |
341 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA2319499 rs764292229 |
344 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146249751 CA2319500 |
346 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA352137515 rs142372068 |
346 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA2319501 rs142372068 |
346 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2319502 rs765327566 |
347 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs373624784 CA2319503 |
348 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 350 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs139267817 CA2319505 |
351 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA72925054 rs756891934 |
353 | E>D | No |
ClinGen Ensembl |
|
| TCGA novel | 353 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352137716 rs1240311024 |
358 | E>K | No |
ClinGen gnomAD |
|
|
CA352137770 rs1440357312 |
365 | R>S | No |
ClinGen gnomAD |
|
| TCGA novel | 367 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2319508 rs755931634 |
369 | S>W | No |
ClinGen ExAC gnomAD |
No associated diseases with Q9Y2C4
6 regional properties for Q9Y2C4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | SH3 domain | 477 - 536 | IPR001452 |
| domain | PTB/PI domain | 31 - 168 | IPR006020 |
| domain | Tensin/EPS8 phosphotyrosine-binding domain | 35 - 164 | IPR013625 |
| domain | Epidermal growth factor receptor kinase substrate, phosphotyrosine-binding domain | 32 - 162 | IPR033928 |
| domain | Eps8, SH3 domain | 481 - 533 | IPR035462 |
| domain | SAM domain | 619 - 680 | IPR041418 |
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrial inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| protein-containing complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| 5'-3' exonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end. |
| endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. |
| endoribonuclease activity | Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks. |
| metal ion binding | Binding to a metal ion. |
| nucleic acid binding | Binding to a nucleic acid. |
| single-stranded DNA endodeoxyribonuclease activity | Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| apoptotic DNA fragmentation | The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments. |
3 homologous proteins in AiPD
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAIKSIASRL | RGSRRFLSGF | VAGAVVGAAG | AGLAALQFFR | SQGAEGALTG | KQPDGSAEKA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VLEQFGFPLT | GTEARCYTNH | ALSYDQAKRV | PRWVLEHISK | SKIMGDADRK | HCKFKPDPNI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PPTFSAFNED | YVGSGWSRGH | MAPAGNNKFS | SKAMAETFYL | SNIVPQDFDN | NSGYWNRIEM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| YCRELTERFE | DVWVVSGPLT | LPQTRGDGKK | IVSYQVIGED | NVAVPSHLYK | VILARRSSVS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TEPLALGAFV | VPNEAIGFQP | QLTEFQVSLQ | DLEKLSGLVF | FPHLDRTSDI | RNICSVDTCK |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LLDFQEFTLY | LSTRKIEGAR | SVLRLEKIME | NLKNAEIEPD | DYFMSRYEKK | LEELKAKEQS |
| GTQIRKPS |