Q96CP6
Gene name |
GRAMD1A |
Protein name |
Protein Aster-A |
Names |
GRAM domain-containing protein 1A |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57655 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q96CP6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q96CP6-F1 | Predicted | AlphaFoldDB |
610 variants for Q96CP6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA405302032 rs1458325570 CA405302029 |
2 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA307696616 rs923270153 |
3 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1295131460 CA405302049 |
3 | D>G | No |
ClinGen TOPMed |
|
|
CA405304384 rs1257658016 |
4 | T>I | No |
ClinGen gnomAD |
|
|
rs754498083 CA9371016 |
7 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs764843073 CA405304455 |
7 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA405304447 rs754498083 |
7 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs764843073 CA9371017 |
7 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1378141364 CA405304484 |
8 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA9371018 rs538716547 |
9 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs375002487 CA9371020 |
10 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs758428360 CA9371019 |
10 | R>W | Variant assessed as Somatic; 4.64e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA405304571 rs924428128 |
12 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA307696624 rs924428128 |
12 | T>R | No |
ClinGen gnomAD |
|
|
CA405304616 rs1396715329 |
14 | S>N | No |
ClinGen gnomAD |
|
|
CA405304647 rs1308744637 |
15 | S>N | No |
ClinGen gnomAD |
|
|
rs1374980355 CA405304666 |
16 | S>P | No |
ClinGen gnomAD |
|
|
rs780284522 CA9371023 |
18 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs560717922 CA307696631 |
20 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9371025 rs768668618 |
20 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA9371027 rs748644887 |
22 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774467744 CA9371026 |
22 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1235928030 CA405304928 |
27 | P>S | No |
ClinGen gnomAD |
|
|
CA405304947 rs772131074 |
28 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA307696635 rs772131074 |
28 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA405304942 rs772131074 |
28 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs773423276 CA9371029 |
29 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA9371028 rs772671985 |
29 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs367650191 CA9371030 |
30 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs367650191 CA9371031 |
30 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1288040082 CA405305018 |
31 | P>T | No |
ClinGen gnomAD |
|
|
rs200713250 CA9371033 |
32 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA307696645 rs200713250 |
32 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 33 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405305085 rs1330776728 |
34 | E>Q | No |
ClinGen gnomAD |
|
|
CA405305184 rs1287437091 |
37 | P>R | No |
ClinGen TOPMed |
|
|
rs1045331360 CA307696648 |
37 | P>S | No |
ClinGen gnomAD |
|
|
CA405305200 rs1600290738 |
38 | G>D | No |
ClinGen Ensembl |
|
|
CA9371036 rs762779764 |
40 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1205247273 CA405305248 |
40 | M>T | No |
ClinGen gnomAD |
|
|
rs752296570 CA9371035 |
40 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA9371037 rs371587089 |
41 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371038 rs751484974 |
42 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1217307132 CA405305282 |
42 | E>Q | No |
ClinGen gnomAD |
|
|
CA405305326 rs1312727926 |
43 | K>N | No |
ClinGen gnomAD |
|
|
rs757014354 CA9371039 |
44 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 45 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405305413 rs1600290893 |
47 | S>C | No |
ClinGen Ensembl |
|
|
rs754042843 CA9371041 |
47 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1600290927 CA405305502 |
52 | G>S | No |
ClinGen Ensembl |
|
|
rs1198854509 CA405305553 |
55 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1600290946 CA405305545 |
55 | P>S | No |
ClinGen Ensembl |
|
|
CA405305583 rs1488335193 |
57 | T>I | No |
ClinGen gnomAD |
|
|
rs1189861455 CA405305594 |
58 | P>L | No |
ClinGen gnomAD |
|
|
CA9371043 rs778930595 |
59 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs562417464 CA9371044 |
61 | Q>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 64 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs952292412 CA307696672 |
65 | S>G | No |
ClinGen Ensembl |
|
|
rs1170680899 CA405305713 |
65 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs772065016 CA9371045 |
66 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1006427325 CA307696674 |
66 | R>W | No |
ClinGen Ensembl |
|
|
rs1332263654 CA405305806 |
69 | I>M | No |
ClinGen gnomAD |
|
|
CA9371046 rs374494022 |
70 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1253615 rs747475800 CA9371047 |
70 | R>H | Variant assessed as Somatic; 0.0 impact. oesophagus [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs747475800 CA405305843 |
70 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200055640 CA9371070 |
79 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs935823636 CA307696713 |
80 | S>N | No |
ClinGen gnomAD |
|
|
rs1243911788 CA405307641 |
83 | S>I | No |
ClinGen gnomAD |
|
| TCGA novel | 85 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9371094 rs747604471 |
89 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA9371095 rs368528631 |
90 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1369457587 CA405307920 |
91 | E>K | No |
ClinGen TOPMed |
|
|
CA405308031 rs371499583 |
93 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371099 rs776357005 |
94 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371098 rs766148365 |
94 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405308211 rs1329565811 |
97 | F>L | No |
ClinGen TOPMed |
|
|
rs763212765 CA9371100 |
98 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA405308234 rs1311079104 |
98 | S>N | No |
ClinGen gnomAD |
|
|
rs763212765 CA405308221 |
98 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs764173658 CA9371101 |
99 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA9371102 rs751840346 |
99 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs1032318880 CA307696838 |
100 | L>V | No |
ClinGen Ensembl |
|
|
rs767721865 CA9371104 |
101 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA405308345 rs1373777473 |
101 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
| TCGA novel | 102 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405308440 rs1263824679 |
104 | E>Q | No |
ClinGen gnomAD |
|
|
CA405308482 rs1568323066 |
105 | R>C | No |
ClinGen Ensembl |
|
|
rs750956865 CA9371105 |
105 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1196958888 CA405308528 |
107 | I>V | No |
ClinGen gnomAD |
|
|
CA9371106 rs756755493 |
108 | V>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 109 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405308847 rs1600293970 |
110 | Y>S | No |
ClinGen Ensembl |
|
|
rs1568323364 CA405308906 |
111 | S>C | No |
ClinGen Ensembl |
|
|
CA405308934 rs1487294780 |
112 | C>R | No |
ClinGen TOPMed |
|
|
CA405308979 rs1205459718 |
113 | A>T | No |
ClinGen TOPMed |
|
|
CA9371147 rs765579990 |
116 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371148 rs753099711 |
116 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371149 rs758785331 |
123 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA9371150 rs777364613 |
123 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA405309361 rs1242964507 |
127 | S>P | No |
ClinGen TOPMed |
|
|
rs1035459969 CA307696935 |
128 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1399909727 CA405309461 |
129 | N>K | No |
ClinGen TOPMed |
|
|
CA9371155 rs769814732 |
133 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs749038258 CA9371157 |
139 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1217832250 COSM1208810 CA405309816 |
139 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs201363094 CA9371159 |
143 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1170181204 CA405310072 |
145 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1170181204 CA405310069 |
145 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1421091306 CA405310060 |
145 | S>T | No |
ClinGen TOPMed |
|
|
CA405310107 rs1398416661 |
146 | I>M | No |
ClinGen gnomAD |
|
|
rs767144146 CA9371188 |
147 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371189 rs199663006 |
148 | L>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs974543130 CA307696992 |
150 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs755621608 CA9371190 |
154 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1568323871 CA405310394 |
156 | K>T | No |
ClinGen Ensembl |
|
|
CA9371192 rs753816402 |
157 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9371193 rs755034748 |
159 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1045022070 CA307696997 |
163 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1309282788 CA405310726 |
167 | I>T | No |
ClinGen gnomAD |
|
|
CA9371198 rs746090275 |
168 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA9371199 rs769848875 COSM1392777 |
171 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs749761264 CA9371201 |
173 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs538059805 CA307697003 |
173 | S>N | No |
ClinGen Ensembl |
|
|
CA405310944 COSM1392778 rs1411852504 |
174 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs774300269 CA9371257 |
177 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs761524689 CA9371258 |
179 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376477989 CA9371260 |
180 | S>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA405311990 rs1419457253 |
181 | F>C | No |
ClinGen TOPMed |
|
|
rs754049262 CA9371261 |
183 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA307697206 rs754049262 |
183 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1199512513 CA405312049 |
184 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs755226113 CA9371262 |
184 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs765331104 COSM1680886 CA9371263 |
186 | R>C | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM3712885 rs1169351041 CA405312097 |
186 | R>H | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs551820623 CA9371266 |
190 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA405312200 rs1568325550 |
191 | I>L | No |
ClinGen Ensembl |
|
|
CA9371267 rs747523503 |
193 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA405312262 rs1225479573 |
193 | R>H | No |
ClinGen gnomAD |
|
|
CA405312293 rs1339772190 |
195 | W>R | No |
ClinGen gnomAD |
|
|
rs757682786 CA9371268 |
197 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA405312339 rs1236239566 |
197 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9371269 rs781732325 |
200 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs745502312 CA9371270 |
201 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1246485875 CA405314176 |
203 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA9371292 rs201931870 |
205 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9371293 rs771563151 |
207 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768145018 CA9371294 |
207 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1391451271 CA405314263 |
208 | E>K | No |
ClinGen TOPMed |
|
|
rs1391451271 CA405314267 |
208 | E>Q | No |
ClinGen TOPMed |
|
|
rs1405105227 CA405314362 |
212 | L>Q | No |
ClinGen TOPMed |
|
|
CA405314384 rs1250357917 |
214 | H>R | No |
ClinGen gnomAD |
|
|
CA307697576 rs888154704 |
216 | C>R | No |
ClinGen gnomAD |
|
|
CA307697578 rs1006661420 |
217 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA405314421 rs1161993649 |
217 | Y>H | No |
ClinGen gnomAD |
|
|
rs773224886 CA405314429 |
218 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371298 rs773224886 |
218 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1297384300 CA405314459 |
223 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA405314471 rs1393033909 |
225 | S>G | No |
ClinGen gnomAD |
|
|
rs1242630285 CA405314494 |
227 | D>E | No |
ClinGen TOPMed |
|
|
rs1307680319 CA405314503 |
229 | D>N | No |
ClinGen gnomAD |
|
|
CA9371300 rs760348791 |
230 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1264539783 CA405314523 |
231 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
CA405314529 rs1323825707 |
232 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1013443874 CA405314531 |
233 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA307697583 rs1013443874 |
233 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs770765265 CA9371301 |
234 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405314536 rs1479883599 |
234 | L>V | No |
ClinGen gnomAD |
|
|
rs866679180 CA307697584 |
236 | L>M | No |
ClinGen Ensembl |
|
|
rs1197381489 CA405314555 |
237 | N>Y | No |
ClinGen gnomAD |
|
|
rs907248598 CA307697587 |
238 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA405314565 rs907248598 |
238 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1352524780 CA405314573 |
240 | G>R | No |
ClinGen gnomAD |
|
|
CA307697632 rs372009504 |
241 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA307697634 rs918479702 |
242 | P>L | No |
ClinGen TOPMed |
|
| TCGA novel | 244 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9371325 rs761916127 |
245 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs750877472 CA9371328 |
250 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750877472 CA9371327 |
250 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754280652 CA9371330 |
251 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1048232910 CA307697642 |
252 | S>R | No |
ClinGen gnomAD |
|
|
rs755360846 CA9371332 |
253 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371331 rs755360846 |
253 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755360846 CA405314662 |
253 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405314670 rs1360449232 |
254 | I>F | No |
ClinGen TOPMed |
|
|
rs1176539013 CA405314671 |
254 | I>N | No |
ClinGen TOPMed |
|
|
CA9371334 rs757845825 |
255 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA405314676 rs757845825 |
255 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA307697649 rs867628330 |
256 | S>F | No |
ClinGen TOPMed |
|
|
rs201944800 CA9371335 |
257 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA307697656 rs1039495738 |
258 | G>E | No |
ClinGen Ensembl |
|
|
rs1006630500 CA307697654 |
258 | G>R | No |
ClinGen gnomAD |
|
|
CA307697658 rs900830902 |
261 | D>E | No |
ClinGen gnomAD |
|
|
CA405314710 rs1251472121 |
261 | D>G | No |
ClinGen TOPMed |
|
|
rs781011646 CA9371340 |
262 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs182927749 CA9371341 |
262 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs781011646 CA9371339 |
262 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs774655097 CA9371342 |
264 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244979827 CA405314731 |
265 | E>K | No |
ClinGen TOPMed |
|
|
CA9371344 rs748435155 |
265 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371345 rs772036426 |
269 | V>G | No |
ClinGen ExAC gnomAD |
|
|
CA405314765 rs1318853694 |
270 | G>C | No |
ClinGen gnomAD |
|
|
CA9371347 rs374622037 |
271 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201394899 CA9371350 |
272 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs765599980 CA9371351 |
272 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765599980 CA405314776 |
272 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371352 rs371486274 |
273 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs758086727 CA9371353 |
273 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1409508416 CA405314793 |
274 | G>D | No |
ClinGen gnomAD |
|
|
rs760394231 CA307697679 |
275 | H>R | No |
ClinGen Ensembl |
|
|
rs751030324 CA9371355 |
277 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1392780 rs781114140 CA9371357 |
278 | P>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs372725667 CA9371358 |
279 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA405314899 rs1278342331 |
281 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1278342331 CA405314896 |
281 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA307697688 rs971898249 |
282 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA9371361 rs748353358 |
282 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs199949479 CA9371362 |
283 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs371740352 CA9371364 |
286 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs938797618 CA307697694 |
287 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA405314983 rs1243111224 |
287 | A>V | No |
ClinGen TOPMed |
|
|
rs1361092239 CA405315011 |
289 | H>R | No |
ClinGen TOPMed |
|
|
rs1234562427 CA405315020 COSM327441 |
290 | G>R | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1234562427 CA405315025 |
290 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
rs767102367 CA9371393 |
292 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA405316221 rs1245125855 |
293 | E>K | No |
ClinGen gnomAD |
|
|
CA9371394 rs750005184 |
295 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 297 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9371395 rs760286823 |
299 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405316378 rs1383698931 |
299 | V>I | No |
ClinGen TOPMed |
|
|
rs1209913629 CA405316422 |
301 | S>N | No |
ClinGen gnomAD |
|
|
CA405316433 rs202058211 COSM1208811 |
301 | S>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA405316451 rs1238224102 |
302 | Q>K | No |
ClinGen gnomAD |
|
|
CA405316573 rs201330906 |
304 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9371398 rs754745864 |
305 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371399 rs754745864 |
305 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751803764 CA9371400 |
305 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA307697846 rs866784674 |
307 | S>Y | No |
ClinGen gnomAD |
|
|
CA405316633 rs1363298639 |
308 | S>R | No |
ClinGen TOPMed |
|
|
rs1459457214 CA405316718 |
312 | T>S | No |
ClinGen gnomAD |
|
|
rs781414377 CA9371402 |
313 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1184259863 CA405316825 |
317 | P>H | No |
ClinGen TOPMed |
|
|
rs1017620935 CA307697854 |
317 | P>T | No |
ClinGen Ensembl |
|
|
CA9371405 rs371022002 |
318 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 318 | P>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405316841 rs371022002 |
318 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1242652835 CA405316849 |
319 | S>R | No |
ClinGen TOPMed |
|
|
rs749813438 CA9371406 |
320 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769055746 CA9371407 |
321 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774615869 CA9371408 |
323 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs200458965 CA9371409 |
323 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA405316965 rs1347989738 |
324 | Q>R | No |
ClinGen gnomAD |
|
|
CA9371411 rs773033458 |
325 | P>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 325 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760200791 CA9371412 |
326 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA405317099 rs1273964414 |
331 | L>V | No |
ClinGen TOPMed |
|
|
CA405317129 rs1364674539 |
333 | P>L | No |
ClinGen TOPMed |
|
|
rs1364674539 CA405317126 |
333 | P>R | No |
ClinGen TOPMed |
|
|
rs1212908500 CA405317119 |
333 | P>S | No |
ClinGen TOPMed |
|
|
CA405317145 rs1568329436 |
335 | D>N | No |
ClinGen Ensembl |
|
|
CA9371416 rs765051083 |
336 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371418 rs758219589 |
338 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA307697872 rs778469767 |
338 | P>S | No |
ClinGen Ensembl |
|
|
CA405317202 rs1415456878 |
339 | S>R | No |
ClinGen gnomAD |
|
|
CA405317219 rs1405599074 |
341 | E>K | No |
ClinGen gnomAD |
|
|
rs1600309415 CA405317326 |
348 | N>Y | No |
ClinGen Ensembl |
|
|
CA9371422 rs756170126 |
349 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs977189616 CA307697879 |
350 | S>C | No |
ClinGen Ensembl |
|
| TCGA novel | 351 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA307697882 rs924328261 |
354 | G>R | No |
ClinGen Ensembl |
|
|
CA307697885 rs935752573 |
357 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA9371445 rs368382914 |
357 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371447 rs375535357 |
358 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA307698100 rs201058243 |
360 | A>T | No |
ClinGen Ensembl |
|
|
CA9371448 rs770540006 |
361 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs770540006 TCGA novel CA405317822 |
361 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA ExAC gnomAD |
|
rs780927984 CA9371449 |
363 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA307698101 rs866275385 |
364 | P>S | No |
ClinGen Ensembl |
|
|
CA405317907 rs1600314566 |
365 | D>A | No |
ClinGen Ensembl |
|
|
rs368156191 CA9371452 |
365 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769359996 CA307698102 |
365 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769359996 CA9371451 |
365 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs762941010 CA9371453 |
367 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA405317968 rs1367884228 |
368 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
COSM1208813 CA9371455 rs774177933 |
368 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs761616229 CA9371456 |
369 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs766473562 CA9371457 |
369 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1231197695 CA405318003 |
370 | L>I | No |
ClinGen gnomAD |
|
|
rs1358737652 CA405318053 |
371 | L>R | No |
ClinGen gnomAD |
|
|
CA9371460 rs765420067 |
372 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs374797083 CA405318132 |
374 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371461 rs374797083 |
374 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA405318200 rs1245942769 |
377 | H>L | No |
ClinGen gnomAD |
|
|
rs1245942769 CA405318188 |
377 | H>P | No |
ClinGen gnomAD |
|
|
CA405318266 rs948089718 |
380 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
CA307698104 rs948089718 |
380 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA405318308 rs757644754 |
381 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9371464 rs373468606 |
381 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9371467 rs745592354 |
382 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780649596 CA9371466 |
382 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1476012828 CA405318323 |
383 | L>F | No |
ClinGen Ensembl |
|
|
CA9371468 rs769182680 |
385 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs898605651 CA307698105 |
386 | M>V | No |
ClinGen TOPMed |
|
|
rs200796879 CA9371469 |
389 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371471 rs768529688 |
391 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 394 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405318551 rs1227176649 |
394 | L>V | No |
ClinGen gnomAD |
|
|
rs373768365 CA9371473 |
395 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1568331528 CA405318582 |
396 | G>V | No |
ClinGen Ensembl |
|
|
CA405318646 rs1238409757 |
401 | C>Y | No |
ClinGen TOPMed |
|
|
rs1179230532 CA405319325 |
406 | V>M | No |
ClinGen TOPMed |
|
|
CA405319331 rs1483724757 |
407 | T>A | No |
ClinGen TOPMed |
|
|
rs1041857043 CA307699080 |
407 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA405319352 rs1229219054 |
410 | P>R | No |
ClinGen gnomAD |
|
|
CA9371504 rs756463809 |
411 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA307699103 rs773303390 |
412 | S>C | No |
ClinGen Ensembl |
|
|
CA405319372 rs1345690135 |
413 | G>E | No |
ClinGen TOPMed |
|
| TCGA novel | 414 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1282196187 CA405319377 |
414 | D>Y | No |
ClinGen TOPMed |
|
|
CA405319402 rs1219650586 |
417 | C>Y | No |
ClinGen TOPMed |
|
|
rs770233073 CA9371506 |
420 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754474256 CA9371507 |
420 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1035658758 CA307699110 |
421 | R>G | No |
ClinGen Ensembl |
|
|
rs538898774 CA307699113 |
421 | R>L | No |
ClinGen 1000Genomes gnomAD |
|
|
CA405319429 rs538898774 |
421 | R>Q | No |
ClinGen 1000Genomes gnomAD |
|
|
CA9371508 rs778464805 |
422 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778464805 CA9371509 |
422 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405319438 rs1352361143 |
423 | L>R | No |
ClinGen TOPMed |
|
|
CA9371510 rs368282539 |
424 | T>M | Variant assessed as Somatic; 4.643e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA405319450 rs371691581 |
425 | Y>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA307699119 rs866759273 |
425 | Y>H | No |
ClinGen Ensembl |
|
|
rs867485981 CA307699122 |
426 | T>A | No |
ClinGen Ensembl |
|
|
CA405319453 rs1477209980 |
426 | T>N | No |
ClinGen gnomAD |
|
|
rs1402616413 CA405319467 |
428 | P>L | No |
ClinGen gnomAD |
|
|
CA405319464 rs749587215 |
428 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371515 rs749587215 |
428 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9371516 rs768825500 |
429 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1372429370 CA405319475 |
430 | S>G | No |
ClinGen gnomAD |
|
|
CA307699127 rs1006954064 |
430 | S>R | No |
ClinGen TOPMed |
|
|
rs1410547514 CA405319484 |
431 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs866415611 CA307699130 |
432 | P>L | No |
ClinGen Ensembl |
|
|
CA9371518 rs761817768 |
434 | G>S | No |
ClinGen ExAC |
|
|
CA405319524 rs1438958127 |
435 | P>S | No |
ClinGen gnomAD |
|
|
CA307699136 rs1033476436 |
436 | K>N | No |
ClinGen Ensembl |
|
|
CA9371521 rs200028587 |
438 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA405319605 rs1298168550 |
440 | V>M | No |
ClinGen Ensembl |
|
|
rs762468942 CA9371545 |
445 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1041984894 CA307699210 |
447 | F>I | No |
ClinGen Ensembl |
|
|
rs532310369 CA9371548 CA9371547 |
447 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9371550 rs750199236 |
448 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371549 rs73038384 |
448 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9371551 rs755975236 |
449 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9371552 rs200063858 |
449 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA9371554 rs772191872 |
450 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777758932 CA9371555 |
451 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1244887311 CA405319701 |
452 | Q>H | No |
ClinGen gnomAD |
|
|
rs1341695685 CA405319695 |
452 | Q>K | No |
ClinGen gnomAD |
|
|
CA9371557 rs771379443 |
453 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs759830313 CA9371559 |
454 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs373799637 CA9371561 |
455 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs762551631 CA9371562 |
456 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs1600327851 CA405319724 |
456 | C>W | No |
ClinGen Ensembl |
|
|
CA405319730 rs1600327861 |
457 | V>G | No |
ClinGen Ensembl |
|
|
CA405319735 rs1600327883 |
458 | V>G | No |
ClinGen Ensembl |
|
|
CA9371566 rs201980615 |
461 | E>K | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA405319761 rs1600328000 |
462 | V>G | No |
ClinGen Ensembl |
|
|
rs1411410758 CA405319760 |
462 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA405319758 rs1411410758 |
462 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA9371569 rs766157442 |
464 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1252168380 CA405319779 |
465 | Q>R | No |
ClinGen TOPMed |
|
|
rs758601070 CA9371571 |
466 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA9371572 rs778083304 |
467 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs527324665 CA9371574 |
468 | P>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA405319793 rs1396605433 |
468 | P>T | No |
ClinGen gnomAD |
|
|
rs746434928 CA9371576 |
469 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA405319807 rs1317831688 |
470 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA405319806 rs1317831688 |
470 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs984337859 CA307699243 |
470 | Q>R | No |
ClinGen Ensembl |
|
|
CA405319814 rs1233006242 |
471 | D>Y | No |
ClinGen gnomAD |
|
|
rs770162176 CA9371577 |
472 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371578 rs775763103 |
474 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA405319843 rs1212271151 |
475 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA405319851 rs1231299670 |
476 | A>D | No |
ClinGen TOPMed |
|
|
CA405319862 rs1251138271 |
478 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA9371580 rs369279394 |
478 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371581 rs774151524 |
480 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs761348115 CA9371582 |
483 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA9371583 rs767192433 |
483 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405319910 rs1466469578 |
486 | R>Q | No |
ClinGen gnomAD |
|
|
rs373185819 CA9371585 |
486 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs539194619 CA307699258 |
489 | A>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs760215740 CA9371589 |
490 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs754837904 CA9371588 |
490 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757318037 CA9371591 |
492 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1314356906 CA405319944 |
492 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA405320568 rs1283799646 |
493 | V>A | No |
ClinGen TOPMed |
|
|
CA405320564 rs1346870043 |
493 | V>M | No |
ClinGen TOPMed |
|
|
rs746441779 CA9371621 |
494 | S>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 495 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9371622 rs770491592 |
498 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs776422595 CA9371623 |
498 | R>H | Variant assessed as Somatic; 4.639e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs776422595 CA405320626 |
498 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA307699945 rs756850258 |
500 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
rs756850258 CA405320649 |
500 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs367650806 CA9371625 |
500 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371628 rs762764540 |
503 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA307699954 rs542970681 |
504 | W>* | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs750672092 CA9371630 |
504 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA9371631 rs760657333 |
505 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA405320783 rs1410167578 |
507 | V>A | No |
ClinGen gnomAD |
|
|
CA405320774 rs1156534243 |
507 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs754266755 CA9371634 |
509 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9371636 rs201676567 |
510 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780594556 CA307699971 |
511 | I>F | No |
ClinGen TOPMed |
|
|
rs780594556 CA405320841 |
511 | I>L | No |
ClinGen TOPMed |
|
|
CA307699973 rs907625335 |
511 | I>T | No |
ClinGen gnomAD |
|
|
rs758839060 CA9371638 |
514 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777238052 CA405320919 |
515 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA9371639 rs777238052 |
515 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA307699978 rs940309926 |
516 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
CA9371641 rs770345885 |
517 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371642 rs780797330 |
517 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs745402036 CA9371643 |
517 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769675585 CA9371644 |
518 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405321017 rs1391711904 |
519 | I>N | No |
ClinGen TOPMed |
|
|
rs1378322918 CA405321064 |
521 | D>V | No |
ClinGen gnomAD |
|
|
rs1257546932 CA405321102 |
523 | F>L | No |
ClinGen gnomAD |
|
|
rs377171333 CA9371645 |
523 | F>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371646 rs762674637 |
524 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs200079015 CA9371647 |
525 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9371668 rs771145652 |
528 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371669 rs372802395 |
528 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA9371671 rs377034978 |
530 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
rs377034978 CA9371670 |
530 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs776139771 CA9371672 |
531 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA405321282 rs763597509 |
532 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371673 rs763597509 |
532 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371674 rs368898323 |
533 | A>P | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 534 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751908180 CA9371675 |
536 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 538 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405321379 rs1450172577 |
539 | E>K | No |
ClinGen gnomAD |
|
|
rs1215923698 CA405321411 |
540 | E>D | No |
ClinGen gnomAD |
|
|
rs750130929 CA9371678 |
542 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371679 rs755615740 |
545 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1374815957 CA405321508 |
546 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1374815957 CA405321503 |
546 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9371680 rs779578414 |
546 | R>W | No |
ClinGen ExAC TOPMed |
|
|
CA9371681 rs562077836 |
547 | G>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA405321522 rs562077836 |
547 | G>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9371682 rs373469052 |
550 | S>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774346091 CA307700047 |
550 | S>F | No |
ClinGen Ensembl |
|
|
CA9371685 rs190582427 |
551 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA9371687 rs746163845 |
553 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA9371686 rs371022525 |
553 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762971101 CA9371690 |
554 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371689 rs201039041 |
554 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405321632 rs1243445691 |
555 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA9371691 rs769137476 |
555 | R>W | Variant assessed as Somatic; 4.782e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM244788 CA9371692 rs200473202 |
557 | R>Q | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs564391202 CA307700057 |
557 | R>W | No |
ClinGen 1000Genomes gnomAD |
|
|
rs762221396 CA9371693 |
558 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1464746405 CA405321740 |
560 | S>G | No |
ClinGen gnomAD |
|
|
rs750261791 CA9371696 |
560 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766040255 CA9371697 |
560 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs754452685 CA9371699 |
562 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753306201 CA9371698 |
562 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371700 rs778852122 |
563 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371702 rs550154589 |
564 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs770095395 CA9371705 |
565 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371704 rs199583350 |
565 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA405321899 rs549285137 |
566 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs749329367 CA9371707 |
567 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA405321927 rs1479830872 |
568 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs774913699 CA9371709 |
570 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1287358038 CA405321975 |
570 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA405321963 rs774913699 |
570 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1568338910 CA405321980 |
571 | P>A | No |
ClinGen Ensembl |
|
|
rs1262937452 CA405322034 |
574 | D>E | No |
ClinGen gnomAD |
|
|
rs772403182 CA9371711 |
575 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371712 rs201640440 |
576 | C>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761060434 CA9371713 |
576 | C>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 577 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA9371714 rs765952057 |
577 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201696171 CA9371716 |
578 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201696171 CA405322090 |
578 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs201696171 CA307700104 |
578 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs753446139 CA9371715 |
578 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405322106 rs1161010328 |
579 | A>V | No |
ClinGen gnomAD |
|
|
CA307700111 rs865804408 |
580 | G>D | No |
ClinGen TOPMed |
|
|
CA9371718 rs557938407 |
580 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs865804408 CA405322121 |
580 | G>V | No |
ClinGen TOPMed |
|
|
rs758318975 CA9371719 |
583 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371722 rs573758124 |
584 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1034228511 CA307700119 |
584 | S>P | No |
ClinGen Ensembl |
|
|
rs905280597 CA307700172 |
585 | G>D | No |
ClinGen gnomAD |
|
|
rs993040691 CA307700122 |
585 | G>R | No |
ClinGen Ensembl |
|
|
CA307700174 rs866264275 |
588 | S>G | No |
ClinGen Ensembl |
|
|
CA405322296 rs866264275 |
588 | S>R | No |
ClinGen Ensembl |
|
|
CA405322321 rs1211584497 |
589 | S>F | No |
ClinGen gnomAD |
|
|
CA9371750 rs776913228 |
590 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs555755876 CA9371751 |
590 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs555755876 CA405322336 |
590 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA9371752 rs769293398 |
592 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs1600338136 CA405322370 |
592 | S>F | No |
ClinGen Ensembl |
|
|
rs1222601815 CA405322381 |
593 | E>A | No |
ClinGen TOPMed |
|
|
rs369166163 CA9371754 |
593 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA307700183 rs541225997 |
595 | S>C | No |
ClinGen 1000Genomes TOPMed |
|
|
CA307700186 rs1014196223 |
596 | V>M | No |
ClinGen Ensembl |
|
|
CA405322437 rs1170631492 |
597 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1053515910 CA307700189 |
599 | G>C | No |
ClinGen TOPMed |
|
|
CA405322481 rs1348930989 |
599 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 600 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374726600 CA9371757 CA9371756 |
601 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 604 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA405322573 rs1442221851 |
605 | P>S | No |
ClinGen gnomAD |
|
|
rs1320512256 CA405322585 |
606 | S>G | No |
ClinGen gnomAD |
|
|
CA9371759 rs564706756 |
606 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1600338429 CA405322597 |
606 | S>R | No |
ClinGen Ensembl |
|
|
rs557614059 CA9371760 |
607 | A>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1216415790 CA405322608 |
607 | A>S | No |
ClinGen gnomAD |
|
|
rs1600338474 CA405322636 |
608 | L>P | No |
ClinGen Ensembl |
|
|
CA9371761 rs765320250 |
611 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 611 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs369953090 CA9371762 |
613 | I>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369953090 CA405322749 |
613 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776364405 CA9371800 |
619 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs759359929 CA9371802 |
620 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA405323593 rs1205652973 |
620 | I>V | No |
ClinGen gnomAD |
|
|
rs557724457 CA307700651 |
621 | I>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA405323637 rs1196083016 |
622 | L>P | No |
ClinGen gnomAD |
|
|
CA9371805 rs761791093 |
624 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs368505221 CA307700658 |
626 | N>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs750870899 CA9371807 |
627 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371809 rs767022797 |
630 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405323777 rs1600343511 |
631 | Y>S | No |
ClinGen Ensembl |
|
|
rs751912479 CA9371810 |
632 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755406863 CA9371811 |
632 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs755406863 CA9371812 |
632 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405323805 rs1316583239 |
633 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs747901853 CA9371813 |
637 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9371814 rs757817976 |
639 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA405323904 rs757817976 |
639 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs200752248 CA9371815 |
640 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA9371817 rs770863701 |
641 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs746525769 CA9371816 |
641 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405323917 rs1378054436 |
642 | T>A | No |
ClinGen TOPMed |
|
|
rs776558473 CA9371818 |
644 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA9371819 rs371582697 |
645 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA307700684 rs200311339 |
647 | H>Q | No |
ClinGen 1000Genomes |
|
|
CA405323986 rs1243958001 |
650 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1164519549 CA405324005 |
652 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1415305953 CA405324043 |
654 | G>D | No |
ClinGen gnomAD |
|
|
CA405324119 rs1476346477 |
655 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs781098278 CA9371838 |
656 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1600344236 CA405324133 |
656 | F>S | No |
ClinGen Ensembl |
|
|
rs1363057731 CA405324143 |
657 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1160263506 CA405324172 |
658 | Q>H | No |
ClinGen gnomAD |
|
|
CA9371840 rs769550732 |
659 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA9371841 rs375746328 |
659 | T>M | Variant assessed as Somatic; 4.806e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA405324210 rs1287984184 |
661 | T>I | No |
ClinGen TOPMed |
|
|
CA307700752 rs949047209 |
663 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
CA9371844 rs773318704 |
664 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA9371846 rs766631594 |
665 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs777247074 CA9371847 |
668 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371849 rs765868120 |
672 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405324382 rs1278332624 |
673 | F>L | No |
ClinGen gnomAD |
|
|
rs1201265517 CA405324412 |
674 | H>R | No |
ClinGen gnomAD |
|
|
rs190169534 CA9371852 |
675 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA307700771 rs1048541704 |
676 | V>M | No |
ClinGen Ensembl |
|
|
rs1600344541 CA405324486 |
678 | V>G | No |
ClinGen Ensembl |
|
|
rs1448664284 CA405324505 |
679 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA307700774 rs888648528 |
680 | K>R | No |
ClinGen gnomAD |
|
|
CA405324534 rs1300363046 |
681 | W>* | No |
ClinGen TOPMed |
|
|
rs1401004384 CA405324544 |
681 | W>C | No |
ClinGen TOPMed |
|
|
rs1364299279 CA405324529 |
681 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
CA405324600 rs866834909 |
684 | I>M | No |
ClinGen gnomAD |
|
|
CA9371855 rs756726505 |
686 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA405324620 rs749955019 |
686 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA9371856 rs749955019 |
686 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
COSM1208814 CA9371854 rs756726505 |
686 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA405324625 rs1376801362 |
687 | A>P | No |
ClinGen gnomAD |
|
|
rs370077465 CA9371859 |
689 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1222339239 CA405324677 |
690 | E>D | No |
ClinGen gnomAD |
|
|
rs560884243 CA9371860 |
692 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778050841 CA9371861 |
693 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA405324714 rs1378252337 |
693 | D>V | No |
ClinGen gnomAD |
|
|
rs1234260994 CA405324722 |
694 | E>K | No |
ClinGen gnomAD |
|
|
rs1301274277 CA405324729 |
694 | E>V | No |
ClinGen gnomAD |
|
|
CA9371901 rs756191681 |
695 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs779944486 CA9371902 |
696 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA405325804 rs1334993631 |
697 | F>V | No |
ClinGen gnomAD |
|
|
rs1193863139 CA405325823 |
698 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA9371904 rs768974341 |
700 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA405325881 rs1370762276 |
703 | H>R | No |
ClinGen TOPMed |
|
|
CA9371906 rs748497384 |
704 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1406412438 CA405325902 |
704 | Q>R | No |
ClinGen gnomAD |
|
|
rs1159058837 CA405325936 |
705 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1343447980 CA405325950 |
706 | I>N | No |
ClinGen gnomAD |
|
|
CA9371907 rs772490598 |
707 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA9371910 rs766078482 |
713 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs759092464 CA9371912 |
715 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1057353058 CA307701363 |
717 | P>R | No |
ClinGen Ensembl |
|
|
rs1380212394 CA405326173 |
717 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA9371914 rs752742522 |
718 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA9371913 rs765210680 |
718 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA405326223 rs1252800164 |
720 | D>G | No |
ClinGen TOPMed |
|
|
rs749496815 CA307701370 |
720 | D>N | No |
ClinGen TOPMed |
|
| TCGA novel | 721 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1054899105 CA307701372 |
724 | S>A | No |
ClinGen TOPMed |
|
| rs1484816597 | 725 | S>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q96CP6
Functions
10 GO annotations of cellular component
| Name | Definition |
|---|---|
| autophagosome | A double-membrane-bounded compartment that engulfs endogenous cellular material as well as invading microorganisms to target them to the lytic vacuole/lysosome for degradation as part of macroautophagy. |
| cytoplasmic vesicle | A vesicle found in the cytoplasm of a cell. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| endoplasmic reticulum-plasma membrane contact site | A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes. |
| extrinsic component of cytoplasmic side of plasma membrane | The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| intrinsic component of endoplasmic reticulum membrane | The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane. |
| organelle membrane contact site | A zone of apposition between the membranes of an organelle with another membrane, either another membrane of the same organelle, a membrane of another organelle, or the plasma membrane. Membrane contact sites (MCSs) are structured by bridging complexes. They are specialized for communication, including the efficient traffic of small molecules such as Ca2+ ions and lipids, as well as enzyme-substrate interactions. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| cholesterol binding | Binding to cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. |
| cholesterol transfer activity | Removes cholesterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. |
| sterol binding | Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol. |
| sterol transfer activity | Removes a sterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| autophagy | The cellular catabolic process in which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation. |
| cellular response to cholesterol | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholesterol stimulus. |
| intracellular sterol transport | The directed movement of sterols within cells. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8IYS0 | GRAMD1C | Protein Aster-C | Homo sapiens (Human) | PR |
| Q3KR37 | GRAMD1B | Protein Aster-B | Homo sapiens (Human) | PR |
| Q80TI0 | Gramd1b | Protein Aster-B | Mus musculus (Mouse) | PR |
| Q9ZVT9 | At1g03370 | C2 and GRAM domain-containing protein At1g03370 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FGS8 | At5g50170 | C2 and GRAM domain-containing protein At5g50170 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MFDTTPHSGR | STPSSSPSLR | KRLQLLPPSR | PPPEPEPGTM | VEKGSDSSSE | KGGVPGTPST |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QSLGSRNFIR | NSKKMQSWYS | MLSPTYKQRN | EDFRKLFSKL | PEAERLIVDY | SCALQREILL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QGRLYLSENW | ICFYSNIFRW | ETTISIQLKE | VTCLKKEKTA | KLIPNAIQIC | TESEKHFFTS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FGARDRCFLL | IFRLWQNALL | EKTLSPRELW | HLVHQCYGSE | LGLTSEDEDY | VSPLQLNGLG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TPKEVGDVIA | LSDITSSGAA | DRSQEPSPVG | SRRGHVTPNL | SRASSDADHG | AEEDKEEQVD |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SQPDASSSQT | VTPVAEPPST | EPTQPDGPTT | LGPLDLLPSE | ELLTDTSNSS | SSTGEEADLA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ALLPDLSGRL | LINSVFHVGA | ERLQQMLFSD | SPFLQGFLQQ | CKFTDVTLSP | WSGDSKCHQR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| RVLTYTIPIS | NPLGPKSASV | VETQTLFRRG | PQAGGCVVDS | EVLTQGIPYQ | DYFYTAHRYC |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ILGLARNKAR | LRVSSEIRYR | KQPWSLVKSL | IEKNSWSGIE | DYFHHLEREL | AKAEKLSLEE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GGKDARGLLS | GLRRRKRPLS | WRAHGDGPQH | PDPDPCARAG | IHTSGSLSSR | FSEPSVDQGP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GAGIPSALVL | ISIVICVSLI | ILIALNVLLF | YRLWSLERTA | HTFESWHSLA | LAKGKFPQTA |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TEWAEILALQ | KQFHSVEVHK | WRQILRASVE | LLDEMKFSLE | KLHQGITVSD | PPFDTQPRPD |
| DSFS |