Q3KR37
Gene name |
GRAMD1B (KIAA1201, UNQ3032/PRO9834) |
Protein name |
Protein Aster-B |
Names |
GRAM domain-containing protein 1B |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57476 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q3KR37
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q3KR37-F1 | Predicted | AlphaFoldDB |
519 variants for Q3KR37
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1951071576 RCV001291084 |
128 | R>* | Intellectual disability [ClinVar] | Yes |
ClinVar dbSNP |
| TCGA novel | 2 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6333282 rs752907684 |
3 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 5 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1320100913 CA383057087 |
8 | C>G | No |
ClinGen TOPMed gnomAD |
|
|
rs76580869 CA229966074 |
9 | T>P | No |
ClinGen Ensembl |
|
|
rs1359906796 CA383063495 |
10 | A>P | No |
ClinGen gnomAD |
|
|
CA383063497 rs1359906796 |
10 | A>T | No |
ClinGen gnomAD |
|
|
rs1041615418 CA229966094 |
11 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs993277025 CA229966096 |
14 | N>K | No |
ClinGen Ensembl |
|
|
rs760249355 CA6333321 |
15 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA229966119 rs903048868 |
15 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA6333322 rs748868785 |
17 | T>A | No |
ClinGen ExAC gnomAD |
|
|
COSM3808626 rs999972541 CA229966150 |
19 | A>T | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1343316648 CA383063605 |
20 | C>Y | No |
ClinGen gnomAD |
|
|
CA229966159 rs868505983 |
21 | S>* | No |
ClinGen gnomAD |
|
|
CA383063649 rs1161546642 |
24 | L>P | No |
ClinGen TOPMed |
|
|
rs894577598 CA229966185 |
25 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs1179255945 CA383063676 |
27 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA383063675 rs1456920849 |
27 | R>W | No |
ClinGen gnomAD |
|
|
CA6333325 rs760044799 |
28 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA383063690 rs537927876 |
29 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA383063695 rs1425565204 |
29 | R>L | No |
ClinGen gnomAD |
|
|
CA6333326 rs537927876 |
29 | R>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1168774150 CA383063711 |
31 | P>S | No |
ClinGen gnomAD |
|
|
rs760901686 CA6333328 |
32 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs753980128 CA6333330 |
33 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA6333331 rs757482018 |
33 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750472988 CA6333333 |
34 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA383063740 rs1370156270 |
34 | Q>R | No |
ClinGen gnomAD |
|
|
CA229966220 rs1024315807 |
35 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA229966225 rs1004505378 |
36 | Q>E | No |
ClinGen TOPMed |
|
|
rs1183236305 CA383063763 |
36 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1183236305 CA383063765 |
36 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs368078644 CA6333334 |
37 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1198666415 CA383063784 |
38 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1026084418 CA383063865 |
45 | G>D | No |
ClinGen TOPMed |
|
|
rs1026084418 CA229966234 |
45 | G>V | No |
ClinGen TOPMed |
|
|
CA229966235 rs748022861 |
47 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748022861 CA6333336 |
47 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383063891 rs1592094492 |
48 | H>D | No |
ClinGen Ensembl |
|
|
CA383063894 rs1247125379 |
48 | H>P | No |
ClinGen gnomAD |
|
|
CA383063908 rs1478882645 |
49 | S>C | No |
ClinGen gnomAD |
|
|
rs1435538267 CA383063919 |
50 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA6333338 rs777548798 |
50 | S>T | No |
ClinGen ExAC |
|
|
CA6333340 rs770509019 |
51 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1466228954 CA383063930 |
51 | D>V | No |
ClinGen gnomAD |
|
|
rs1592094665 CA383063941 |
52 | K>R | No |
ClinGen Ensembl |
|
|
rs773851458 CA6333341 |
53 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1592094714 CA383063950 |
53 | S>P | No |
ClinGen Ensembl |
|
|
CA6333343 rs2276409 |
54 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA383063981 rs1275930227 |
56 | T>K | No |
ClinGen gnomAD |
|
|
CA383063993 rs761144627 COSM1208819 |
57 | P>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
CA6333345 rs761144627 |
57 | P>Q | No |
ClinGen ExAC |
|
| TCGA novel | 58 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1271474946 CA383064019 |
60 | G>D | No |
ClinGen gnomAD |
|
|
CA383064016 rs1218824523 |
60 | G>S | No |
ClinGen gnomAD |
|
|
rs921395364 CA383064023 |
61 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
COSM1475131 CA229966261 rs921395364 |
61 | V>M | Variant assessed as Somatic; impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1209232507 CA383064029 |
62 | Q>K | No |
ClinGen gnomAD |
|
|
CA383064031 rs1290422654 |
62 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA383064038 rs764365722 |
63 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333346 rs764365722 |
63 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1214117874 CA383064057 |
66 | S>P | No |
ClinGen gnomAD |
|
|
COSM1208823 CA383064082 rs1163864464 |
70 | G>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1416519760 CA383064091 |
71 | R>L | No |
ClinGen gnomAD |
|
|
CA383064089 rs1416519760 |
71 | R>Q | No |
ClinGen gnomAD |
|
|
rs750564920 CA6333350 |
71 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1297932736 CA383064102 |
73 | G>D | No |
ClinGen gnomAD |
|
|
rs763079105 CA6333351 |
73 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA229966304 rs868846413 |
74 | G>D | No |
ClinGen Ensembl |
|
|
CA6333352 rs767530052 |
74 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383064109 rs1592095229 |
75 | K>Q | No |
ClinGen Ensembl |
|
|
rs1592095252 CA383064124 |
76 | N>K | No |
ClinGen Ensembl |
|
|
CA383064130 rs1592095284 |
77 | S>F | No |
ClinGen Ensembl |
|
|
CA6333375 rs377168373 |
80 | S>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs369716573 CA6333376 |
85 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763984941 CA6333400 |
90 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA229978867 rs570959026 |
95 | N>S | No |
ClinGen 1000Genomes |
|
|
CA383066371 rs1322809783 |
97 | D>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 102 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs765007012 CA6333403 |
106 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs531490633 CA6333404 |
108 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 113 | V>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA229979313 rs375080947 |
122 | D>H | No |
ClinGen ESP |
|
|
CA383066821 rs1264166646 |
133 | E>A | No |
ClinGen gnomAD |
|
| TCGA novel | 135 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383066859 rs1443514559 |
136 | I>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6333432 rs749660161 |
141 | N>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 142 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 146 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383067548 rs1170206716 |
152 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA229980211 rs1021191097 |
152 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA383067552 rs1021191097 |
152 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1405181132 CA383067574 |
154 | K>E | No |
ClinGen gnomAD |
|
|
rs1480759321 CA383067582 |
154 | K>R | No |
ClinGen TOPMed |
|
|
CA6333457 rs758654739 |
156 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA383067655 rs1340791303 |
158 | S>A | No |
ClinGen TOPMed |
|
|
CA383067658 rs1304116416 |
158 | S>F | No |
ClinGen TOPMed |
|
|
CA383067673 rs1565436059 |
159 | M>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1406405547 CA383067668 |
159 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 164 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6333458 rs780201409 |
166 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs1430801211 CA383067787 |
167 | L>I | No |
ClinGen gnomAD |
|
|
rs1013518328 CA229980229 |
172 | I>L | No |
ClinGen Ensembl |
|
|
rs1592193958 CA383067975 |
179 | E>Q | No |
ClinGen Ensembl |
|
|
CA229980230 rs1033800528 |
180 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
CA229982679 rs1047450644 |
184 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA383068523 rs1233169320 COSM1146599 |
185 | S>L | lung large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA6333472 rs753231387 |
188 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs753231387 CA6333471 |
188 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA383068546 rs1207068677 |
189 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1351709340 CA383068545 |
189 | R>W | No |
ClinGen gnomAD |
|
|
CA383068565 rs1444981884 |
192 | T>A | No |
ClinGen TOPMed |
|
|
rs900414573 CA229982706 |
206 | E>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 207 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383068701 rs1397025441 |
209 | L>V | No |
ClinGen gnomAD |
|
|
rs763377469 CA6333492 |
210 | C>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 211 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 213 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 215 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766719644 CA383068756 |
216 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA383068788 rs1227430707 |
221 | C>R | No |
ClinGen gnomAD |
|
|
CA6333498 rs756116420 |
225 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6333500 rs564971872 |
233 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1373547245 CA383068903 |
237 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
| TCGA novel | 238 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771458771 CA6333505 |
239 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769186696 CA383068925 CA6333508 |
240 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747738090 CA6333506 |
240 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333509 rs374293269 |
241 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA229984716 rs895281458 |
241 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs774716927 CA6333511 |
242 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA6333510 rs766828280 |
242 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs759793942 CA6333512 |
243 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA6333513 rs767820521 |
244 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383068947 rs1565448169 |
244 | T>I | No |
ClinGen Ensembl |
|
|
rs756273514 CA6333515 |
245 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs752857335 CA383068951 |
245 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA229984751 rs1045479840 |
245 | M>R | No |
ClinGen TOPMed |
|
|
CA6333514 rs752857335 |
245 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1286717396 CA383068982 |
248 | C>S | No |
ClinGen TOPMed |
|
|
rs1049273508 CA229985753 |
250 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA6333536 rs766462983 |
251 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383069009 rs766462983 |
251 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs994687856 CA229985754 |
253 | V>E | No |
ClinGen Ensembl |
|
|
rs754862708 CA6333538 |
258 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA229985763 rs889307024 |
265 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6333540 rs752494131 |
266 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1455008458 CA383069122 |
267 | I>V | No |
ClinGen gnomAD |
|
|
CA6333542 rs114589175 RCV000974314 |
272 | D>E | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1349732962 CA383069245 |
278 | P>L | No |
ClinGen gnomAD |
|
|
rs1307248266 CA383069240 |
278 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs770423087 CA6333544 |
282 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs779453804 CA6333545 |
283 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1472430563 CA383069307 |
284 | N>I | No |
ClinGen TOPMed |
|
|
CA383069332 rs1205423823 |
286 | T>I | No |
ClinGen gnomAD |
|
| TCGA novel | 287 | L>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383069335 rs1480183400 |
287 | L>V | No |
ClinGen gnomAD |
|
|
CA6333548 rs140366389 |
289 | S>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA383069361 rs1479518380 |
290 | T>P | No |
ClinGen gnomAD |
|
|
CA383069376 rs1592240842 |
291 | G>E | No |
ClinGen Ensembl |
|
|
CA6333550 rs769050280 |
292 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA383069403 rs1354383551 |
294 | E>K | No |
ClinGen gnomAD |
|
|
rs1443363619 CA383069416 |
295 | A>T | No |
ClinGen gnomAD |
|
|
CA383069443 rs1282107937 |
297 | V>A | No |
ClinGen gnomAD |
|
|
rs113672412 CA6333554 |
297 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs1565451689 | 298 | S>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA229985891 rs759398423 |
298 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA6333555 rs759398423 |
298 | S>W | No |
ClinGen ExAC gnomAD |
|
|
CA6333571 rs748398230 |
301 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1453444317 CA383069568 |
302 | L>P | No |
ClinGen gnomAD |
|
|
CA383069573 rs1476036305 |
303 | P>L | No |
ClinGen gnomAD |
|
|
rs373808855 CA229986543 |
303 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs373808855 CA6333573 |
303 | P>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1030348550 CA229986547 |
304 | L>P | No |
ClinGen TOPMed |
|
|
rs1383849253 CA383069579 |
305 | E>K | No |
ClinGen gnomAD |
|
|
CA383069600 rs1424407150 |
307 | E>D | No |
ClinGen gnomAD |
|
|
CA6333574 rs771946953 |
308 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333575 rs532856454 |
308 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA383069611 rs1325291798 |
310 | E>K | No |
ClinGen gnomAD |
|
|
CA6333579 rs753560680 |
311 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333580 rs756933883 |
312 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383069626 rs1380375088 |
312 | D>Y | No |
ClinGen gnomAD |
|
|
CA6333583 rs757894340 |
313 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs749953166 CA6333582 |
313 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs757894340 CA383069633 |
313 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1592246731 CA383069636 |
314 | S>A | No |
ClinGen Ensembl |
|
|
CA383069639 rs747509131 |
314 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333585 rs747509131 |
314 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1447653328 CA383069643 |
315 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs149488546 CA6333586 |
317 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs267602745 CA229986641 |
318 | E>K | No |
ClinGen Ensembl |
|
|
rs1046775434 CA383069671 |
319 | L>P | No |
ClinGen gnomAD |
|
|
rs1046775434 CA229986645 |
319 | L>R | No |
ClinGen gnomAD |
|
|
CA6333587 rs375511617 |
320 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
COSM4145426 rs191981781 CA6333588 |
321 | I>V | thyroid [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA6333589 rs114469707 |
323 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs114469707 CA383069694 |
323 | N>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs376872587 CA229986655 |
324 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376872587 CA6333590 |
324 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA383069710 rs1322519595 |
325 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs371265661 CA6333591 |
325 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA383069711 rs1403860607 |
326 | G>R | No |
ClinGen gnomAD |
|
|
CA383069719 rs1451766272 |
327 | E>K | No |
ClinGen gnomAD |
|
|
rs774236612 CA6333593 |
329 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA229986686 rs370508125 |
330 | E>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA229986691 rs76756402 |
331 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA6333594 rs76756402 |
331 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA383069755 rs1279173737 |
332 | I>F | No |
ClinGen gnomAD |
|
|
rs776432140 CA6333596 |
333 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 334 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1432159441 CA383069767 |
334 | P>S | No |
ClinGen TOPMed |
|
|
CA383069773 rs1261292885 |
335 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 337 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs761575476 CA6333597 |
338 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs764839388 CA6333598 |
339 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1258706185 CA383069817 |
342 | F>Y | No |
ClinGen gnomAD |
|
|
rs1029451265 CA229986713 |
343 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA383069825 rs377539345 |
343 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6333599 rs377539345 |
343 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1362832679 CA383069831 |
344 | D>A | No |
ClinGen gnomAD |
|
|
CA383069835 rs1472693993 |
344 | D>E | No |
ClinGen gnomAD |
|
|
rs1160778334 CA383069837 |
345 | N>D | No |
ClinGen gnomAD |
|
|
rs1426518441 CA383069840 |
345 | N>S | No |
ClinGen gnomAD |
|
|
rs866068201 CA229986720 |
347 | D>G | No |
ClinGen Ensembl |
|
|
rs1317231120 CA383069865 |
348 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA383069895 rs1389438565 |
353 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6333602 rs751049869 |
357 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs867480430 CA229986747 |
359 | H>N | No |
ClinGen Ensembl |
|
|
CA6333603 rs755577223 |
360 | D>N | Variant assessed as Somatic; 4.675e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA383062747 rs1183869073 |
363 | E>K | No |
ClinGen gnomAD |
|
|
CA6333642 rs200540342 |
364 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1160028716 CA383062761 |
365 | Q>* | No |
ClinGen gnomAD |
|
|
CA383062763 rs1339548414 |
365 | Q>P | No |
ClinGen TOPMed |
|
|
rs373699394 CA6333643 |
368 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA229948535 rs373699394 |
368 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1468703173 CA383062789 |
369 | E>K | No |
ClinGen gnomAD |
|
|
CA383062824 rs1450603005 |
374 | R>Q | No |
ClinGen gnomAD |
|
|
rs748832223 CA229948539 |
374 | R>W | No |
ClinGen gnomAD |
|
|
CA383062833 rs1304266955 |
375 | Q>H | No |
ClinGen gnomAD |
|
|
CA6333646 rs750631307 |
377 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333647 rs758559482 |
381 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA229948580 rs770386203 |
382 | N>S | No |
ClinGen Ensembl |
|
|
CA383062904 rs1385913574 |
385 | V>A | No |
ClinGen TOPMed |
|
| TCGA novel | 385 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383062900 COSM1352170 rs1262409324 |
385 | V>M | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs367844387 CA6333649 |
389 | Y>C | No |
ClinGen ESP ExAC gnomAD |
|
|
rs777552496 CA6333651 |
390 | D>E | No |
ClinGen ExAC gnomAD |
|
|
COSM1352172 rs1183079679 CA383062942 |
391 | L>I | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA229948621 rs554684318 |
391 | L>R | No |
ClinGen 1000Genomes |
|
|
CA383062954 rs1176395644 |
393 | F>L | No |
ClinGen gnomAD |
|
|
rs1426446805 CA383062962 |
394 | T>A | No |
ClinGen gnomAD |
|
|
CA383062968 rs1416610584 |
395 | N>D | No |
ClinGen gnomAD |
|
|
rs374919881 CA6333652 |
396 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1000145974 CA229948665 |
397 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs774227885 CA6333654 |
400 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745517263 CA383063006 |
401 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745517263 CA6333655 |
401 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383063013 rs1402522933 |
402 | F>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 404 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs958828726 CA229948718 |
404 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs760013778 CA229948730 |
405 | Q>E | No |
ClinGen Ensembl |
|
|
rs1368239562 CA383063043 |
405 | Q>H | No |
ClinGen gnomAD |
|
|
CA229948739 rs1012745976 |
406 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1024525756 CA229948746 |
407 | R>C | No |
ClinGen TOPMed |
|
|
CA229948749 rs371994802 |
407 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs771808457 CA6333656 |
408 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383063089 rs1450598849 |
411 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs772568357 CA229950026 |
412 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA229950022 rs760097861 |
412 | I>N | No |
ClinGen TOPMed |
|
|
rs1383706222 CA383063094 |
412 | I>V | No |
ClinGen gnomAD |
|
|
CA383063110 rs1162276287 |
414 | H>L | No |
ClinGen TOPMed gnomAD |
|
|
CA383063109 rs1162276287 |
414 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA383063116 rs1316181066 |
415 | P>Q | No |
ClinGen gnomAD |
|
|
CA383063114 rs1406577746 |
415 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA383063125 rs1435660703 |
416 | W>* | No |
ClinGen gnomAD |
|
|
CA383063129 rs1204307633 |
417 | K>* | No |
ClinGen TOPMed |
|
|
rs918117659 CA229950042 |
417 | K>R | No |
ClinGen Ensembl |
|
|
rs776005482 CA229950069 |
419 | E>K | No |
ClinGen TOPMed |
|
|
rs757192032 CA6333671 |
420 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 421 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1284979934 CA383063165 |
422 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs778881141 CA6333672 |
429 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA383063229 rs1465758519 |
431 | T>I | No |
ClinGen gnomAD |
|
|
rs1211051190 CA383063232 |
432 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs771900117 CA383063243 |
433 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771900117 CA6333674 |
433 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383063239 rs1592264224 |
433 | T>P | No |
ClinGen Ensembl |
|
|
rs774973587 CA6333675 |
434 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1592264296 CA383063259 |
436 | N>T | No |
ClinGen Ensembl |
|
|
rs760967017 CA229950118 |
437 | P>L | No |
ClinGen gnomAD |
|
|
rs746597994 CA6333676 |
439 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs201009984 CA6333679 |
442 | T>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 443 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383063298 rs1457769586 |
443 | A>T | No |
ClinGen gnomAD |
|
|
CA383063307 rs1161268135 |
444 | T>S | No |
ClinGen gnomAD |
|
|
CA6333681 rs764491640 |
445 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383063316 rs1334522808 |
446 | R>K | No |
ClinGen gnomAD |
|
|
CA383063332 rs1297351943 |
448 | T>K | No |
ClinGen TOPMed |
|
|
rs774707387 CA6333702 |
454 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383063411 rs1452688501 |
457 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 457 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383063420 rs1329911488 |
458 | S>N | No |
ClinGen Ensembl |
|
| TCGA novel | 462 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1379208489 CA383063448 |
462 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 466 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383063477 rs1261074275 |
466 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA383063496 rs1191880391 |
467 | V>I | No |
ClinGen TOPMed |
|
|
rs1592266396 CA383063524 |
469 | T>P | No |
ClinGen Ensembl |
|
|
rs752871193 CA383063554 |
470 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs542866239 CA6333706 |
471 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA6333707 rs765331397 |
472 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA383063638 rs10893053 |
475 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA383063631 rs1387920256 |
475 | H>R | No |
ClinGen gnomAD |
|
|
rs758353236 CA6333709 |
478 | F>S | No |
ClinGen ExAC |
|
|
rs1325090049 CA383063704 |
479 | Y>D | No |
ClinGen gnomAD |
|
|
CA383063735 rs1230075351 |
481 | I>V | No |
ClinGen gnomAD |
|
|
CA6333710 rs779719653 |
485 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333711 rs751330868 |
486 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1318330456 CA383063851 |
487 | T>I | No |
ClinGen TOPMed |
|
|
CA383063858 rs1216696944 |
488 | R>C | No |
ClinGen TOPMed |
|
|
rs573181030 CA6333712 |
488 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA383063892 rs1301307776 |
490 | A>V | No |
ClinGen TOPMed |
|
|
COSM3687139 CA6333713 rs780877280 |
491 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA383063898 rs1390495624 |
491 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1368020418 CA383063926 |
493 | K>E | No |
ClinGen gnomAD |
|
|
rs755934019 CA229950670 |
494 | S>T | No |
ClinGen Ensembl |
|
|
rs747701660 CA6333714 |
495 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA383064215 rs1592278576 |
498 | V>G | No |
ClinGen Ensembl |
|
|
rs1348079401 CA383064210 |
498 | V>I | No |
ClinGen gnomAD |
|
|
rs1565465448 CA383064223 |
500 | T>S | No |
ClinGen Ensembl |
|
|
CA383064243 rs1331085646 |
503 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6333736 rs748744678 |
503 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6333737 rs748744678 |
503 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs969160143 CA383064253 |
505 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs969160143 CA229953522 |
505 | R>G | No |
ClinGen gnomAD |
|
|
rs779442588 CA6333738 |
505 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1249789698 CA383064269 |
507 | Q>R | No |
ClinGen gnomAD |
|
|
CA383064291 rs1272715913 |
510 | G>E | No |
ClinGen TOPMed |
|
| TCGA novel | 511 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1247803361 CA383064320 |
514 | T>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA6333742 rs747239385 |
517 | E>K | No |
ClinGen ExAC |
|
|
CA6333744 rs776874803 |
518 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs761933797 CA6333745 |
526 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA6333746 rs766270069 |
527 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1329532401 CA383064410 |
527 | Y>H | No |
ClinGen TOPMed |
|
|
rs774345801 CA6333747 |
529 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs538509009 COSM1352174 CA6333748 |
529 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs773095404 CA6333764 |
532 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA383064467 rs1350417509 |
533 | S>N | No |
ClinGen gnomAD |
|
|
CA6333766 rs374304588 COSM1585458 |
534 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
rs62641672 CA6333769 |
536 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs371958694 CA6333768 |
536 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6333770 rs369825461 |
538 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 545 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373054264 CA6333772 |
546 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1247862121 CA383064595 |
547 | H>N | No |
ClinGen gnomAD |
|
| TCGA novel | 548 | R>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 548 | R>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749861438 CA6333773 |
549 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA6333774 rs758997685 |
550 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA383064661 rs1434749828 |
552 | K>T | No |
ClinGen TOPMed |
|
|
rs780686154 CA6333776 |
553 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383064699 rs1190590583 |
557 | K>R | No |
ClinGen TOPMed |
|
|
rs946321091 CA383064710 |
559 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA383064713 rs1202535829 |
559 | T>I | No |
ClinGen TOPMed |
|
|
rs946321091 CA229954239 |
559 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6333780 rs769863986 |
560 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199604534 CA6333781 |
560 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368784935 CA6333785 COSM1352176 |
562 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA gnomAD |
|
rs772035485 CA6333784 |
562 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA383064729 rs1314374755 |
563 | R>K | No |
ClinGen TOPMed |
|
|
COSM1585457 rs1357437283 CA383064751 |
566 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs768451724 COSM3415621 CA6333786 |
566 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs768451724 CA383064753 |
566 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs894915963 CA229954327 |
568 | H>R | No |
ClinGen TOPMed |
|
|
rs776221454 CA6333787 |
569 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA6333790 rs749999499 |
570 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333789 rs764749144 |
570 | H>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 572 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6333791 rs762523319 |
572 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA383064799 rs1257670898 |
575 | H>N | No |
ClinGen gnomAD |
|
|
CA383064808 rs1179975438 |
576 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA383064829 rs755488531 |
579 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333794 rs755488531 |
579 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA383064836 rs1399794477 |
580 | M>R | No |
ClinGen gnomAD |
|
|
CA383064834 rs1160090336 |
580 | M>V | No |
ClinGen gnomAD |
|
|
CA229954361 rs373889123 |
581 | S>G | No |
ClinGen ESP TOPMed |
|
|
CA383064853 rs1414178795 |
582 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA383064854 rs1414178795 |
582 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs557839467 CA6333798 |
583 | V>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6333797 rs557839467 |
583 | V>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1452676344 CA383064860 |
584 | T>A | No |
ClinGen Ensembl |
|
|
rs757313912 CA6333800 |
585 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs912435884 CA229954400 |
588 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA383064883 rs912435884 |
588 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA6333801 rs778905988 |
590 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484430156 CA383064906 |
590 | D>Y | No |
ClinGen TOPMed |
|
|
CA6333802 rs575823580 |
591 | V>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1280558584 CA383064932 |
592 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA383064927 rs1199568658 |
592 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 592 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6333803 rs373969484 |
597 | H>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1202425504 COSM3728086 CA383065012 |
598 | V>M | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs377530501 CA6333821 |
600 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs773086921 CA6333824 |
605 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA6333823 COSM1208817 rs769465102 |
605 | R>W | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs748956557 CA6333825 |
606 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6333826 rs370988688 |
608 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA383065597 rs1214237041 |
609 | E>D | No |
ClinGen gnomAD |
|
|
rs200711609 CA6333828 |
609 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1565470137 CA383065605 |
610 | D>G | No |
ClinGen Ensembl |
|
|
CA6333830 rs375570291 |
610 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6333829 rs375570291 |
610 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6333831 rs761185461 |
611 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA6333833 rs754161430 |
612 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs754161430 CA383065631 |
612 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1592288801 CA383065627 |
612 | P>S | No |
ClinGen Ensembl |
|
|
rs757493522 CA6333834 |
613 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 613 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs534553453 CA383065647 |
614 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 614 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6333836 rs534553453 |
614 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6333837 rs534553453 |
614 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6333838 rs781251456 |
616 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs201812830 CA6333839 |
618 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA383065717 rs374118769 |
619 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA229955689 rs770363124 |
620 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA383065773 rs1163327613 |
624 | L>P | No |
ClinGen TOPMed |
|
|
rs1310036362 CA383065799 |
627 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs778697361 CA6333844 |
629 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA6333845 rs745453238 |
630 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1211941355 CA383067323 |
634 | S>G | No |
ClinGen TOPMed |
|
|
rs1443449023 CA383067451 |
636 | V>M | No |
ClinGen gnomAD |
|
|
rs375428225 CA6333883 |
639 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA383067475 rs375428225 |
639 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6333884 rs746558109 |
640 | I>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 640 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383067543 rs1213612735 |
642 | N>K | No |
ClinGen gnomAD |
|
|
CA6333886 rs780611834 |
643 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1311437280 CA383067596 |
644 | M>I | No |
ClinGen TOPMed |
|
|
rs1006465006 CA229959464 |
647 | Y>H | No |
ClinGen TOPMed |
|
| TCGA novel | 647 | Y>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs770234763 CA6333888 |
648 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1291145842 CA383067686 |
649 | L>F | No |
ClinGen TOPMed |
|
|
rs773476425 CA6333889 |
651 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1186594571 CA383067731 |
651 | M>V | No |
ClinGen gnomAD |
|
|
CA383067836 rs1592310591 |
655 | T>A | No |
ClinGen Ensembl |
|
|
rs775623707 CA229959503 |
655 | T>I | No |
ClinGen TOPMed |
|
|
rs775623707 CA383067840 |
655 | T>N | No |
ClinGen TOPMed |
|
|
rs775623707 CA229959496 |
655 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA6333890 rs549560391 |
656 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA229959543 rs760937431 |
657 | Q>* | No |
ClinGen Ensembl |
|
|
CA383067887 rs1395001592 |
657 | Q>H | No |
ClinGen gnomAD |
|
|
CA383067903 rs1462850443 |
658 | T>S | No |
ClinGen gnomAD |
|
|
rs1326089661 CA383067937 |
660 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1431670868 CA383067987 |
662 | W>* | No |
ClinGen gnomAD |
|
|
CA383068025 rs1377048609 |
664 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1272069804 CA383068016 |
664 | G>S | No |
ClinGen gnomAD |
|
|
CA383068045 rs1478030113 |
666 | R>K | No |
ClinGen TOPMed |
|
|
rs947730358 CA229959563 |
666 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA383068078 rs752169349 |
668 | Q>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 669 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383068099 rs774631746 |
670 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs774631746 CA6333892 |
670 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs766011731 CA6333900 |
672 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1377336512 CA383068221 |
675 | Q>H | No |
ClinGen gnomAD |
|
|
rs1408586274 CA383068230 |
676 | T>K | No |
ClinGen gnomAD |
|
|
rs1328730446 CA383068254 |
678 | W>* | No |
ClinGen gnomAD |
|
| TCGA novel | 678 | W>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1336833794 CA383068257 |
679 | A>T | No |
ClinGen gnomAD |
|
|
CA229959926 rs867595369 |
680 | Q>K | No |
ClinGen Ensembl |
|
| TCGA novel | 680 | Q>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs148264959 CA6333903 |
684 | S>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 685 | Q>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747612717 CA383068308 |
686 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747612717 CA6333904 |
686 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 687 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA383068323 rs1193530640 |
688 | Y>C | No |
ClinGen gnomAD |
|
|
rs1565477915 CA383068329 |
689 | H>N | No |
ClinGen Ensembl |
|
|
CA6333906 rs370259530 |
690 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 696 | W>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1565478028 CA383068435 |
703 | S>L | No |
ClinGen Ensembl |
|
|
CA229960005 rs969001195 |
705 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1365651947 CA383069144 |
710 | M>I | No |
ClinGen TOPMed |
|
|
rs1452238751 CA383069131 |
710 | M>V | No |
ClinGen TOPMed |
|
|
CA229963397 rs981266512 |
711 | K>R | No |
ClinGen TOPMed |
|
|
rs1451461778 CA383069183 |
712 | D>G | No |
ClinGen TOPMed |
|
|
rs538908520 CA383069203 |
713 | S>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs538908520 CA6333927 |
713 | S>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs780652358 CA229963418 |
715 | I>V | No |
ClinGen gnomAD |
|
|
rs1160222847 CA383069258 |
716 | N>I | No |
ClinGen gnomAD |
|
|
rs1382909997 CA383069261 |
716 | N>K | No |
ClinGen TOPMed |
|
|
CA229963426 rs4083122 |
717 | L>F | No |
ClinGen Ensembl |
|
|
CA229963431 rs866062141 |
718 | Q>K | No |
ClinGen Ensembl |
|
|
rs1162502089 CA383069289 |
718 | Q>R | No |
ClinGen TOPMed |
|
|
rs772471280 CA6333930 |
720 | G>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA383069321 rs1179974608 |
720 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA383069348 rs1374311060 |
721 | I>M | No |
ClinGen gnomAD |
|
|
rs1415377499 CA383069379 |
723 | S>F | No |
ClinGen gnomAD |
|
|
CA383069387 rs780409933 |
724 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs780409933 CA6333931 |
724 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs747151599 CA6333932 |
724 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA383069444 rs368223750 |
727 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6333934 rs368223750 |
727 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6333933 rs368223750 |
727 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6333935 rs370949646 |
728 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1026118502 CA229963487 |
730 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA229963490 rs986113458 |
730 | S>N | No |
ClinGen TOPMed |
|
|
CA229963495 rs911438812 |
730 | S>R | No |
ClinGen TOPMed |
|
|
CA6333937 rs774167637 |
731 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA383069500 rs1480557545 |
734 | R>M | No |
ClinGen gnomAD |
|
|
CA229963507 rs545662974 |
735 | N>S | No |
ClinGen Ensembl |
|
|
CA383069512 rs1253101591 |
736 | R>C | No |
ClinGen gnomAD |
|
|
CA229963522 rs901617580 |
736 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA383069514 rs901617580 |
736 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs951873344 CA229963526 |
737 | Y>C | No |
ClinGen Ensembl |
|
|
CA383069535 rs1434836714 |
739 | H>C | No |
ClinGen gnomAD |
No associated diseases with Q3KR37
Functions
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| endoplasmic reticulum-plasma membrane contact site | A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| cholesterol binding | Binding to cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. |
| cholesterol transfer activity | Removes cholesterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. |
| phosphatidic acid binding | Binding to phosphatidic acid, any of a class of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids. |
| phosphatidylserine binding | Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine. |
| sterol binding | Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol. |
| sterol transfer activity | Removes a sterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cellular response to cholesterol | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholesterol stimulus. |
| cholesterol homeostasis | Any process involved in the maintenance of an internal steady state of cholesterol within an organism or cell. |
| intracellular sterol transport | The directed movement of sterols within cells. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q8IYS0 | GRAMD1C | Protein Aster-C | Homo sapiens (Human) | PR |
| Q96CP6 | GRAMD1A | Protein Aster-A | Homo sapiens (Human) | PR |
| Q80TI0 | Gramd1b | Protein Aster-B | Mus musculus (Mouse) | PR |
| Q9ZVT9 | At1g03370 | C2 and GRAM domain-containing protein At1g03370 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FGS8 | At5g50170 | C2 and GRAM domain-containing protein At5g50170 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKGFKLSCTA | SNSNRSTPAC | SPILRKRSRS | PTPQNQDGDT | MVEKGSDHSS | DKSPSTPEQG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VQRSCSSQSG | RSGGKNSKKS | QSWYNVLSPT | YKQRNEDFRK | LFKQLPDTER | LIVDYSCALQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RDILLQGRLY | LSENWICFYS | NIFRWETLLT | VRLKDICSMT | KEKTARLIPN | AIQVCTDSEK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| HFFTSFGARD | RTYMMMFRLW | QNALLEKPLC | PKELWHFVHQ | CYGNELGLTS | DDEDYVPPDD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DFNTMGYCEE | IPVEENEVND | SSSKSSIETK | PDASPQLPKK | SITNSTLTST | GSSEAPVSFD |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GLPLEEEALE | GDGSLEKELA | IDNIMGEKIE | MIAPVNSPSL | DFNDNEDIPT | ELSDSSDTHD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EGEVQAFYED | LSGRQYVNEV | FNFSVDKLYD | LLFTNSPFQR | DFMEQRRFSD | IIFHPWKKEE |
| 430 | 440 | 450 | 460 | 470 | 480 |
| NGNQSRVILY | TITLTNPLAP | KTATVRETQT | MYKASQESEC | YVIDAEVLTH | DVPYHDYFYT |
| 490 | 500 | 510 | 520 | 530 | 540 |
| INRYTLTRVA | RNKSRLRVST | ELRYRKQPWG | LVKTFIEKNF | WSGLEDYFRH | LESELAKTES |
| 550 | 560 | 570 | 580 | 590 | 600 |
| TYLAEMHRQS | PKEKASKTTT | VRRRKRPHAH | LRVPHLEEVM | SPVTTPTDED | VGHRIKHVAG |
| 610 | 620 | 630 | 640 | 650 | 660 |
| STQTRHIPED | TPNGFHLQSV | SKLLLVISCV | ICFSLVLLVI | LNMMLFYKLW | MLEYTTQTLT |
| 670 | 680 | 690 | 700 | 710 | 720 |
| AWQGLRLQER | LPQSQTEWAQ | LLESQQKYHD | TELQKWREII | KSSVMLLDQM | KDSLINLQNG |
| 730 | |||||
| IRSRDYTSES | EEKRNRYH |