Q92643
Gene name |
PIGK (GPI8) |
Protein name |
GPI-anchor transamidase |
Names |
GPI transamidase, GPI8 homolog, hGPI8, Phosphatidylinositol-glycan biosynthesis class K protein, PIG-K |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10026 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for Q92643
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 7W72 | EM | 310 A | K | 1-395 | PDB |
| 7WLD | EM | 253 A | K | 2-395 | PDB |
| 8IMX | EM | 285 A | K | 2-395 | PDB |
| 8IMY | EM | 322 A | K | 2-395 | PDB |
| AF-Q92643-F1 | Predicted | AlphaFoldDB |
320 variants for Q92643
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1656391998 RCV001095382 |
33 | Q>* | Neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures [ClinVar] | Yes |
ClinVar dbSNP |
| VAR_084273 | 33 | Q>del | NEDHCAS [UniProt] | Yes | UniProt |
|
rs1656295216 RCV001095379 VAR_084274 |
53 | S>F | Neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures NEDHCAS [ClinVar, UniProt] | Yes |
ClinVar UniProt dbSNP |
| VAR_084275 | 86 | L>P | NEDHCAS; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs772948495 VAR_084276 CA915988 RCV001095380 |
87 | A>V | Neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures NEDHCAS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
VAR_084277 CA915987 rs771836178 |
88 | D>N | NEDHCAS [UniProt] | Yes |
ClinGen UniProt ExAC dbSNP gnomAD |
|
RCV001095381 CA915936 VAR_084278 rs1164656857 |
160 | Y>S | Neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures NEDHCAS [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
COSM3790262 rs780683566 VAR_084279 CA340861601 |
184 | A>V | Variant assessed as Somatic; 0.0 impact. urinary_tract NEDHCAS; unknown pathological significance [NCI-TCGA, Cosmic, UniProt] | Yes |
ClinGen cosmic curated UniProt ExAC NCI-TCGA TOPMed dbSNP gnomAD |
| VAR_084280 | 246 | M>K | NEDHCAS; unknown pathological significance [UniProt] | Yes | UniProt |
|
rs1654968072 VAR_084281 RCV001095378 |
275 | C>R | Neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures NEDHCAS [ClinVar, UniProt] | Yes |
ClinVar UniProt dbSNP |
|
rs747822297 CA916093 |
2 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs778588297 CA916092 |
2 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1274526337 CA340866136 |
3 | V>A | No |
ClinGen TOPMed |
|
|
rs753716594 CA916090 |
3 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs766073727 CA916089 |
5 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1261363106 CA340866094 |
6 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1261363106 CA340866095 |
6 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA340866096 rs1261363106 |
6 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA340866087 rs1557436568 |
6 | S>T | No |
ClinGen Ensembl |
|
|
CA340866073 rs1354232113 |
7 | L>F | No |
ClinGen gnomAD |
|
|
CA340866060 rs1226472325 |
8 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA340866062 rs1226472325 |
8 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs750317869 CA916086 |
8 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340866041 rs1391573167 |
9 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1375676481 CA916084 |
9 | R>W | No |
ClinGen TOPMed |
|
|
CA340866022 rs1226122288 |
10 | A>V | No |
ClinGen gnomAD |
|
|
rs775603566 CA916081 |
11 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA916080 rs138493120 |
13 | V>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA340865980 rs138493120 |
13 | V>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs771138715 CA916078 |
14 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs771138715 CA916077 |
14 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs771138715 CA340865974 |
14 | L>W | No |
ClinGen ExAC gnomAD |
|
|
rs12723684 CA916075 VAR_051518 |
16 | T>A | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| TCGA novel | 16 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771602251 CA916074 |
17 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1475149390 CA340865934 |
17 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs747697976 CA916073 |
18 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs1160072666 CA340865894 |
19 | L>P | No |
ClinGen gnomAD |
|
|
CA916072 rs554331393 |
20 | L>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA340865870 rs768411624 |
21 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290560297 CA340865869 |
21 | S>F | No |
ClinGen gnomAD |
|
|
rs768411624 CA916071 |
21 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs377457719 CA25359966 |
25 | V>M | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA916069 rs779903171 |
26 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs149699790 CA916067 |
27 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1274575713 CA340865828 |
28 | S>G | No |
ClinGen gnomAD |
|
|
CA916066 rs781232088 |
29 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs1434819820 CA340865819 |
29 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA340865809 rs1409436446 |
30 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1455039014 CA340865801 |
31 | E>D | No |
ClinGen gnomAD |
|
|
CA340864673 rs1460540836 |
33 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA340864669 rs1235371257 |
34 | A>T | No |
ClinGen gnomAD |
|
|
CA25359088 rs774869705 |
35 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 35 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA916043 rs189968569 |
36 | Q>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA340864645 rs754121295 |
37 | F>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA916042 rs754121295 |
37 | F>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1251336095 CA340864630 |
39 | R>I | No |
ClinGen TOPMed |
|
|
rs866834228 CA25359087 |
41 | G>V | No |
ClinGen Ensembl |
|
|
rs1432605344 CA340864611 |
42 | H>P | No |
ClinGen TOPMed |
|
|
rs769273282 CA25359086 |
42 | H>Y | No |
ClinGen Ensembl |
|
|
rs756397052 CA916021 |
50 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs368624830 CA916020 |
51 | C>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA340864390 rs1217840350 |
52 | T>A | No |
ClinGen gnomAD |
|
|
CA916019 rs202176006 |
54 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA916018 rs146489857 COSM196628 |
54 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA916017 rs752134431 |
60 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA25358725 rs201652469 |
61 | H>Q | No |
ClinGen 1000Genomes |
|
|
CA916016 rs764545532 |
63 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1299152465 CA340864312 |
64 | N>D | No |
ClinGen TOPMed |
|
|
CA340864309 rs1487724680 |
64 | N>S | No |
ClinGen gnomAD |
|
|
rs1278549191 CA340864298 |
66 | L>F | No |
ClinGen gnomAD |
|
|
CA340864288 rs1260585311 |
67 | S>F | No |
ClinGen gnomAD |
|
|
rs763492163 CA916015 |
69 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA916014 rs775194889 |
70 | R>I | No |
ClinGen ExAC gnomAD |
|
|
rs764775611 CA916013 |
72 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776378076 CA916011 |
74 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs150809384 CA916009 |
76 | G>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1194302567 CA340864230 |
77 | I>V | No |
ClinGen gnomAD |
|
|
CA340864219 rs1433035131 |
78 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs906154227 CA25358723 |
79 | D>E | No |
ClinGen gnomAD |
|
|
rs1193369283 CA340864218 |
79 | D>N | No |
ClinGen gnomAD |
|
|
CA916007 rs771962727 |
80 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340863406 rs1570238602 |
81 | H>R | No |
ClinGen Ensembl |
|
|
CA915989 rs760363739 |
81 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA340863399 rs1200023105 |
82 | I>S | No |
ClinGen gnomAD |
|
|
rs1557812615 CA340863395 |
83 | V>I | No |
ClinGen Ensembl |
|
|
CA25354660 rs763029944 CA25354659 |
85 | M>I | No |
ClinGen Ensembl |
|
|
rs1341393489 CA340863384 |
85 | M>V | No |
ClinGen TOPMed |
|
|
rs761751159 CA915986 |
88 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 88 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1352852417 CA340863352 |
90 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA915985 rs373820468 |
91 | A>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA915984 rs769893344 |
94 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 95 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA340863297 rs1483411687 |
97 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs781305903 CA915982 |
98 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA915981 rs771114122 |
99 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA340863285 rs1304937603 |
99 | P>L | No |
ClinGen gnomAD |
|
|
rs1171371969 CA340863282 |
100 | A>S | No |
ClinGen gnomAD |
|
|
rs753292011 TCGA novel CA25354658 |
102 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs753292011 CA915977 |
102 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA340863268 rs1479093512 |
103 | F>V | No |
ClinGen TOPMed |
|
|
rs1570238504 CA340863257 |
104 | S>N | No |
ClinGen Ensembl |
|
|
CA340863245 rs1364418332 |
105 | H>Q | No |
ClinGen gnomAD |
|
|
CA340863231 rs1425164652 |
107 | N>I | No |
ClinGen gnomAD |
|
| TCGA novel | 110 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1389890005 CA340863202 |
111 | N>S | No |
ClinGen TOPMed |
|
|
rs779607756 CA915975 |
112 | V>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 114 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA340863174 rs1487870897 |
115 | D>V | No |
ClinGen gnomAD |
|
|
CA340863167 rs1371927092 |
116 | D>G | No |
ClinGen TOPMed |
|
|
CA340863139 rs1410032040 |
120 | D>G | No |
ClinGen TOPMed |
|
|
rs1283636852 CA340863117 |
123 | S>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 126 | V>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1433761698 CA340863083 |
126 | V>I | No |
ClinGen Ensembl |
|
|
rs748518163 CA25354420 |
127 | T>A | No |
ClinGen Ensembl |
|
|
rs1184475043 CA340863074 |
127 | T>I | No |
ClinGen TOPMed |
|
|
rs1421002191 CA340863069 |
128 | V>A | No |
ClinGen TOPMed |
|
|
COSM912231 CA915948 rs755599930 |
129 | E>D | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1570236751 CA340863047 |
131 | F>C | No |
ClinGen Ensembl |
|
|
rs147088906 COSM3386340 CA915945 |
133 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated ESP TOPMed |
|
CA915947 rs374050300 |
133 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs761432190 CA915943 |
134 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1196575856 CA340863032 |
134 | V>L | No |
ClinGen gnomAD |
|
|
CA915942 rs751410138 |
137 | G>V | No |
ClinGen ExAC |
|
|
CA915941 rs114260507 |
141 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA25354419 rs974404015 |
142 | S>R | No |
ClinGen TOPMed |
|
|
CA340862934 rs1362711894 |
143 | T>I | No |
ClinGen TOPMed |
|
|
CA340862928 rs1315654393 |
144 | P>S | No |
ClinGen gnomAD |
|
|
rs775451686 CA915940 |
145 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs775451686 COSM912230 CA915939 |
145 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1232781133 CA340862918 |
145 | R>W | No |
ClinGen TOPMed |
|
|
CA340862881 rs1363018131 |
148 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs188063187 CA915938 |
148 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 158 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA25354415 COSM125358 rs537240935 |
161 | M>I | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes gnomAD |
|
rs773146819 CA340862707 |
161 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773146819 CA915934 |
161 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915935 rs760853288 |
161 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915933 rs772481181 |
163 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA25354140 rs968415152 |
164 | H>L | No |
ClinGen TOPMed |
|
|
CA340861848 rs968415152 |
164 | H>R | No |
ClinGen TOPMed |
|
|
rs1381581319 CA340861727 |
173 | Q>K | No |
ClinGen gnomAD |
|
|
rs1482710646 CA340861628 |
180 | N>S | No |
ClinGen gnomAD |
|
|
rs1486891123 CA340861621 |
181 | I>T | No |
ClinGen gnomAD |
|
|
CA25354138 rs1025901755 |
181 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA915907 rs780683566 |
184 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915908 rs201690868 |
184 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA340861587 rs1421887331 |
186 | A>D | No |
ClinGen TOPMed |
|
|
rs746696897 CA915905 |
191 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340861552 rs746696897 |
191 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915904 rs151148520 |
195 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA25354137 rs899841113 |
195 | R>H | No |
ClinGen gnomAD |
|
|
rs1325901837 CA340861495 |
197 | N>K | No |
ClinGen TOPMed |
|
|
CA25353926 rs780273646 |
197 | N>S | No |
ClinGen Ensembl |
|
|
CA25353925 rs990243397 |
200 | L>Q | No |
ClinGen gnomAD |
|
|
CA340861477 rs990243397 |
200 | L>R | No |
ClinGen gnomAD |
|
|
CA340861457 rs1193392666 |
203 | I>T | No |
ClinGen gnomAD |
|
|
CA340861461 rs1422529261 |
203 | I>V | No |
ClinGen gnomAD |
|
|
rs747692385 CA915881 |
204 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373393953 CA915880 |
204 | D>V | No |
ClinGen ESP ExAC gnomAD |
|
|
CA915879 rs777283187 |
205 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs934692063 CA25353924 |
206 | C>S | No |
ClinGen Ensembl |
|
|
rs1488456049 CA340861424 |
208 | G>A | No |
ClinGen gnomAD |
|
|
CA915876 rs756095203 |
211 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA915877 rs144038716 |
211 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751743491 CA915875 |
212 | Y>C | No |
ClinGen ExAC |
|
|
CA340861393 rs1216552863 |
213 | E>G | No |
ClinGen gnomAD |
|
|
COSM83913 rs1308977095 CA340861387 |
214 | R>* | pancreas large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs140360373 COSM168283 CA915874 |
214 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA340861383 COSM1344380 rs1197698653 |
215 | F>L | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs1386097641 CA340861375 |
216 | Y>H | No |
ClinGen gnomAD |
|
| TCGA novel | 218 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752804076 CA915872 |
218 | P>R | No |
ClinGen ExAC |
|
|
CA340861344 rs1441087719 |
220 | I>M | No |
ClinGen gnomAD |
|
|
CA915871 rs765654580 |
220 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs759936217 CA915870 |
221 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA25353923 rs61755360 |
221 | M>V | No |
ClinGen Ensembl |
|
|
CA915869 rs776959715 |
222 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA915868 rs771486033 |
222 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs369037070 CA915867 |
223 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA915866 rs772717476 |
224 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA915864 rs747861600 |
225 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA915863 rs778391770 |
225 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1469011345 CA340861306 |
227 | Q>R | No |
ClinGen gnomAD |
|
|
rs768321598 CA915862 |
228 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 229 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 232 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs142473240 | 234 | S>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA915859 rs756182989 |
234 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779978180 CA915860 |
234 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA340861259 rs756182989 |
234 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340861223 rs1181611130 |
238 | D>N | No |
ClinGen TOPMed |
|
|
CA340861212 rs1352921192 |
239 | P>R | No |
ClinGen gnomAD |
|
|
CA915834 rs748236163 |
241 | I>N | No |
ClinGen ExAC gnomAD |
|
|
rs757186406 CA915835 |
241 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs755424903 CA25353910 |
242 | G>A | No |
ClinGen gnomAD |
|
|
CA915832 rs755197327 |
244 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs779046289 CA915833 |
244 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751082508 CA25353909 COSM1344379 |
246 | M>T | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA915830 CA340861148 rs766756600 |
249 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754005997 CA915831 |
249 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs756433701 CA915829 |
250 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs750772450 CA915828 |
251 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1570233063 CA340861130 |
252 | Y>F | No |
ClinGen Ensembl |
|
|
rs1471231620 CA340861101 |
256 | F>C | No |
ClinGen gnomAD |
|
|
CA915825 rs200133111 |
259 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1477757783 CA340861074 |
260 | I>F | No |
ClinGen gnomAD |
|
|
CA915824 rs763628008 |
264 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs762707056 CA915823 |
267 | N>S | No |
ClinGen ExAC |
|
|
CA340861015 rs1487905997 |
268 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1321482128 CA340861018 |
268 | M>K | No |
ClinGen TOPMed |
|
|
rs1188456248 CA340861020 |
268 | M>V | No |
ClinGen gnomAD |
|
|
CA915821 rs769740813 |
269 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA340860977 rs1262553039 |
272 | F>L | No |
ClinGen TOPMed |
|
| TCGA novel | 273 | Q>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373074286 CA340860960 |
274 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs373074286 CA915807 |
274 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1433438644 CA340860947 |
276 | P>S | No |
ClinGen gnomAD |
|
|
CA915805 rs200092834 COSM1344378 |
278 | S>G | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs765029104 CA915804 |
278 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs200092834 CA915806 |
278 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA340860929 rs1405089981 |
279 | L>M | No |
ClinGen TOPMed |
|
|
CA915803 rs759223889 |
279 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA25353220 rs924306887 |
280 | C>R | No |
ClinGen Ensembl |
|
|
rs1314282275 CA340860919 |
280 | C>W | No |
ClinGen TOPMed gnomAD |
|
|
rs776294990 CA915802 |
281 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA340860903 rs1570227672 |
283 | T>I | No |
ClinGen Ensembl |
|
|
rs770702172 CA915801 |
283 | T>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA915800 rs760555315 |
286 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915799 rs773098452 |
287 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA915798 COSM1220537 rs565004204 |
287 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA25353218 rs1036709266 |
288 | T>P | No |
ClinGen TOPMed |
|
|
CA340860872 rs1191190575 |
289 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1191190575 CA340860871 |
289 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
CA915797 rs369954648 |
289 | D>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA915796 rs367851700 |
290 | L>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA340860856 rs1253084757 |
291 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA25353216 rs1017302043 |
291 | F>L | No |
ClinGen Ensembl |
|
|
CA915795 rs769975199 |
292 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs781421012 CA915793 |
293 | R>T | No |
ClinGen ExAC |
|
|
rs200864553 CA25353215 |
295 | P>S | No |
ClinGen Ensembl |
|
|
rs1303395940 CA340860799 |
300 | I>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1303395940 CA340860798 |
300 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA915792 rs762515810 |
301 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915791 rs752037766 |
302 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340860775 rs1195451713 |
304 | F>L | No |
ClinGen TOPMed |
|
|
rs752323474 CA915788 |
306 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA915789 rs758950509 |
306 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA25353213 rs915990166 |
308 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA915786 rs139868827 |
308 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA340860743 rs1171608071 |
309 | K>T | No |
ClinGen gnomAD |
|
|
CA340860738 rs1455554639 |
310 | V>M | No |
ClinGen gnomAD |
|
|
CA340860712 rs1395107568 |
313 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1395107568 CA340860714 |
313 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs985865222 CA25353211 |
314 | T>A | No |
ClinGen gnomAD |
|
|
CA340860699 rs1468252637 |
315 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA915785 rs753481448 |
316 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1207053105 CA340860692 |
317 | I>V | No |
ClinGen gnomAD |
|
|
rs1319750062 CA340860671 |
320 | Q>K | No |
ClinGen TOPMed |
|
|
CA915781 rs772058300 |
326 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA915782 rs772971888 |
326 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1447218038 CA340860619 |
327 | E>K | No |
ClinGen TOPMed |
|
|
rs1304226298 CA340860608 |
328 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1031910178 CA25353209 |
328 | S>R | No |
ClinGen TOPMed |
|
|
CA915780 rs761731119 |
329 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1183616375 CA340862559 |
330 | Y>C | No |
ClinGen TOPMed |
|
|
rs765622565 CA915650 |
331 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs958235425 CA25349866 |
332 | E>K | No |
ClinGen TOPMed |
|
|
CA915649 rs755376872 |
334 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA340862477 rs754181796 |
336 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754181796 CA915648 |
336 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915647 rs766854318 |
337 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs192818073 CA915646 |
339 | L>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1032614649 CA25349865 |
340 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA340862428 rs1417598367 |
340 | M>T | No |
ClinGen gnomAD |
|
| TCGA novel | 341 | E>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs999164506 CA25349864 |
341 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA25349863 rs763167609 |
342 | P>L | No |
ClinGen TOPMed |
|
|
CA915644 rs766998901 |
343 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761583365 CA915643 |
344 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA915641 rs768388575 |
347 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1229244412 CA340862349 |
347 | E>K | No |
ClinGen gnomAD |
|
|
CA340862313 rs1280710717 |
350 | P>S | No |
ClinGen TOPMed |
|
|
rs762887444 CA915640 |
351 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1229936326 CA340862293 |
352 | A>G | No |
ClinGen gnomAD |
|
|
CA915639 rs775339339 |
354 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA340862250 rs769686064 |
356 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA915638 rs769686064 |
356 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769572940 CA915621 |
359 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1466955439 CA340860543 |
361 | L>R | No |
ClinGen gnomAD |
|
|
CA340860541 rs1170307790 |
362 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA25346722 rs866750336 |
363 | D>Y | No |
ClinGen Ensembl |
|
|
CA340860522 rs1570173649 |
364 | W>* | No |
ClinGen Ensembl |
|
|
rs1570173653 CA340860525 |
364 | W>R | No |
ClinGen Ensembl |
|
|
CA25346721 rs921573097 |
367 | P>S | No |
ClinGen gnomAD |
|
|
CA340860488 rs1392071582 |
369 | G>V | No |
ClinGen gnomAD |
|
|
rs776670177 CA915619 |
370 | F>I | No |
ClinGen ExAC gnomAD |
|
|
rs1261644266 CA340860478 |
371 | I>V | No |
ClinGen TOPMed |
|
|
rs973076111 CA25346720 |
372 | L>P | No |
ClinGen Ensembl |
|
|
CA915617 rs778961432 |
373 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA915616 rs778961432 |
373 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs1488649011 CA340860457 |
375 | W>R | No |
ClinGen gnomAD |
|
|
CA340860446 rs1202296001 |
376 | A>G | No |
ClinGen gnomAD |
|
|
CA915615 rs768873141 |
376 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA915614 rs749456891 |
377 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs1274696200 CA340860438 |
378 | I>V | No |
ClinGen gnomAD |
|
|
rs1000011155 CA25346719 |
379 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA340860407 rs1254798152 |
382 | F>S | No |
ClinGen TOPMed |
|
|
CA25346718 rs113367396 |
383 | F>L | No |
ClinGen Ensembl |
|
| TCGA novel | 384 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750717933 CA915611 |
388 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1302865189 CA340860367 |
388 | I>V | No |
ClinGen gnomAD |
|
|
CA340860361 rs1479164835 |
389 | K>* | No |
ClinGen gnomAD |
|
|
CA340860344 rs1570173553 |
391 | M>V | No |
ClinGen Ensembl |
|
|
rs1408504506 CA340860332 |
392 | K>R | No |
ClinGen gnomAD |
|
|
rs781745240 CA915609 |
394 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs1407243390 CA340860307 |
395 | F>L | No |
ClinGen TOPMed |
|
|
rs902646417 CA25346717 |
396 | F>Q | No |
ClinGen TOPMed |
No associated diseases with Q92643
11 regional properties for Q92643
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | C2 domain | 683 - 805 | IPR000008-1 |
| domain | C2 domain | 1554 - 1679 | IPR000008-2 |
| domain | Phosphatidylinositol 3-kinase Ras-binding (PI3K RBD) domain | 407 - 510 | IPR000341 |
| domain | Phosphatidylinositol 3-/4-kinase, catalytic domain | 1103 - 1394 | IPR000403 |
| domain | Phosphoinositide 3-kinase, accessory (PIK) domain | 859 - 1045 | IPR001263 |
| domain | Phox homology | 1420 - 1536 | IPR001683 |
| domain | C2 phosphatidylinositol 3-kinase-type domain | 672 - 839 | IPR002420 |
| conserved_site | Phosphatidylinositol 3/4-kinase, conserved site | 1135 - 1149 | IPR018936-1 |
| conserved_site | Phosphatidylinositol 3/4-kinase, conserved site | 1233 - 1253 | IPR018936-2 |
| domain | PI3K-C2-alpha, catalytic domain | 1041 - 1393 | IPR037705 |
| domain | Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, PX domain | 1424 - 1532 | IPR042133 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| GPI-anchor transamidase complex | An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxy-terminus of a precursor protein to a GPI-anchor. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| GPI-anchor transamidase activity | Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor. |
| protein disulfide isomerase activity | Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| attachment of GPI anchor to protein | A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain. |
| protein localization to cell surface | A process in which a protein is transported to, or maintained in, a location within the external part of the cell wall and/or plasma membrane. |
| proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAVTDSLSRA | ATVLATVLLL | SFGSVAASHI | EDQAEQFFRS | GHTNNWAVLV | CTSRFWFNYR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| HVANTLSVYR | SVKRLGIPDS | HIVLMLADDM | ACNPRNPKPA | TVFSHKNMEL | NVYGDDVEVD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| YRSYEVTVEN | FLRVLTGRIP | PSTPRSKRLL | SDDRSNILIY | MTGHGGNGFL | KFQDSEEITN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IELADAFEQM | WQKRRYNELL | FIIDTCQGAS | MYERFYSPNI | MALASSQVGE | DSLSHQPDPA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IGVHLMDRYT | FYVLEFLEEI | NPASQTNMND | LFQVCPKSLC | VSTPGHRTDL | FQRDPKNVLI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TDFFGSVRKV | EITTETIKLQ | QDSEIMESSY | KEDQMDEKLM | EPLKYAEQLP | VAQIIHQKPK |
| 370 | 380 | 390 | |||
| LKDWHPPGGF | ILGLWALIIM | VFFKTYGIKH | MKFIF |