Q8TCG2
Gene name |
PI4K2B |
Protein name |
Phosphatidylinositol 4-kinase type 2-beta |
Names |
Phosphatidylinositol 4-kinase type II-beta, PI4KII-BETA |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:55300 |
EC number |
2.7.1.67: Phosphotransferases with an alcohol group as acceptor |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for Q8TCG2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4WTV | X-ray | 190 A | PDB | ||
| 8A5X | X-ray | 240 A | PDB | ||
| AF-Q8TCG2-F1 | Predicted | AlphaFoldDB |
354 variants for Q8TCG2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1228300018 CA356541171 |
2 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA356541168 rs1350591315 |
2 | E>G | No |
ClinGen gnomAD |
|
|
rs1289632549 CA356541161 |
2 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA356541176 rs1266829188 |
3 | D>N | No |
ClinGen gnomAD |
|
|
rs1347578853 CA356541193 |
4 | P>L | No |
ClinGen gnomAD |
|
|
RCV000201382 CA279238 rs863223383 |
4 | P>T | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA356541201 rs766320575 |
5 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA2877595 rs766320575 |
5 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs10021593 CA2877596 |
6 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2877597 rs10021593 |
6 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2877599 rs752373432 |
7 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs866834643 CA93610855 |
8 | D>G | No |
ClinGen gnomAD |
|
|
CA356541227 rs866834643 |
8 | D>V | No |
ClinGen gnomAD |
|
|
rs1044241408 CA93610869 |
9 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1478974889 CA356541233 |
9 | R>W | No |
ClinGen gnomAD |
|
|
rs1577670003 CA356541245 |
10 | L>S | No |
ClinGen Ensembl |
|
|
CA2877601 rs778150664 |
12 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs938782464 CA93610882 |
13 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA93610880 rs918354507 |
13 | A>T | No |
ClinGen gnomAD |
|
|
rs938782464 CA356541279 |
13 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA2877602 rs751882191 |
14 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1286991538 CA356541306 |
16 | G>W | No |
ClinGen gnomAD |
|
|
rs757714447 CA93610890 |
17 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356541318 rs757714447 |
17 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877603 rs757714447 |
17 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356541330 rs1057456837 |
18 | P>L | No |
ClinGen TOPMed |
|
|
CA93610894 rs1057456837 |
18 | P>R | No |
ClinGen TOPMed |
|
|
rs984291369 CA93610904 |
19 | E>D | No |
ClinGen TOPMed |
|
|
CA356541355 rs1234613876 |
20 | E>K | No |
ClinGen gnomAD |
|
|
CA356541380 rs1405928094 |
21 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1256672219 CA356541401 |
22 | E>G | No |
ClinGen TOPMed |
|
|
CA356541392 rs1283108542 |
22 | E>K | No |
ClinGen gnomAD |
|
|
rs576494949 CA93610913 |
24 | G>E | No |
ClinGen 1000Genomes TOPMed |
|
|
CA356541461 rs1484381044 |
25 | E>K | No |
ClinGen TOPMed |
|
|
CA356541490 rs1230844496 |
26 | R>L | No |
ClinGen gnomAD |
|
|
CA356541483 rs1343342206 |
26 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA2877606 rs746431870 |
28 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356541509 rs746431870 |
28 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA93610922 rs746431870 |
28 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs904782501 CA93610934 |
30 | L>I | No |
ClinGen TOPMed |
|
|
CA356541612 rs1202898521 |
36 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs922603173 CA93610950 |
37 | H>L | No |
ClinGen gnomAD |
|
|
CA2877612 rs760393482 |
38 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770780820 CA2877613 |
39 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1476944015 CA356541659 |
39 | R>Q | No |
ClinGen gnomAD |
|
|
rs904616801 CA93610969 |
40 | R>T | No |
ClinGen gnomAD |
|
|
rs776537882 CA2877614 |
42 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1305572005 CA356541698 |
43 | P>S | No |
ClinGen gnomAD |
|
|
rs1000648965 CA93610976 |
45 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA356541729 rs1363203897 |
46 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1193133472 CA356541738 |
47 | V>M | No |
ClinGen TOPMed |
|
|
rs1329704878 CA356541779 |
49 | L>P | No |
ClinGen gnomAD |
|
|
rs1341638148 CA356541809 |
52 | A>P | No |
ClinGen gnomAD |
|
|
CA356541828 rs1266497910 |
53 | A>V | No |
ClinGen TOPMed |
|
|
CA356541832 rs1226499560 |
54 | G>R | No |
ClinGen gnomAD |
|
|
rs1247461807 CA356541854 |
55 | E>D | No |
ClinGen TOPMed |
|
|
rs1267244924 CA356541849 |
55 | E>G | No |
ClinGen gnomAD |
|
|
rs1357199668 CA356541858 |
56 | E>K | No |
ClinGen gnomAD |
|
|
CA356541870 rs1316380257 |
56 | E>V | No |
ClinGen TOPMed |
|
|
rs961053487 CA93610984 |
57 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA93610985 rs895041198 |
59 | A>T | No |
ClinGen Ensembl |
|
|
CA93610988 rs972387702 |
60 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA356541919 rs972387702 |
60 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA93610993 rs1025331501 |
61 | D>E | No |
ClinGen gnomAD |
|
|
rs1560362338 CA356541945 |
62 | E>K | No |
ClinGen Ensembl |
|
| TCGA novel | 62 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356541979 rs1448460809 |
63 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1166354956 CA356542009 |
65 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1166354956 CA356542010 |
65 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1422740369 CA356542028 |
67 | P>Q | No |
ClinGen TOPMed |
|
|
CA356542027 rs1458026792 |
67 | P>S | No |
ClinGen gnomAD |
|
|
CA356542035 rs1478298351 |
68 | P>L | No |
ClinGen TOPMed |
|
|
rs1163172823 CA356542048 |
70 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
CA356542045 rs1196876185 |
70 | D>Y | No |
ClinGen TOPMed |
|
|
rs1344051106 CA356542053 |
71 | V>L | No |
ClinGen gnomAD |
|
|
CA356542065 rs1389133410 |
73 | V>I | No |
ClinGen gnomAD |
|
|
rs762607591 CA2877618 |
74 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877621 rs757680746 |
75 | R>L | No |
ClinGen ExAC |
|
|
rs751290066 CA2877620 |
75 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA2877624 rs756723401 |
76 | S>N | No |
ClinGen ExAC |
|
|
rs750924897 CA2877623 |
76 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA2877625 rs780137098 |
77 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877626 rs780137098 |
77 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356542110 rs780137098 |
77 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA93611034 rs313549 |
78 | S>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1332509702 CA356542116 |
78 | S>F | No |
ClinGen gnomAD |
|
|
rs313549 VAR_031974 CA2877628 |
78 | S>P | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs313549 CA356542111 |
78 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA356542112 rs1332509702 |
78 | S>Y | No |
ClinGen gnomAD |
|
|
rs1464314396 CA356542127 |
79 | A>D | No |
ClinGen gnomAD |
|
|
CA356542118 rs748462384 |
79 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA2877629 rs748462384 |
79 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA356542130 rs1464314396 |
79 | A>V | No |
ClinGen gnomAD |
|
|
rs1257904101 CA356542134 |
80 | E>* | No |
ClinGen gnomAD |
|
|
CA2877630 rs770690855 |
80 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1257904101 CA356542131 |
80 | E>K | No |
ClinGen gnomAD |
|
|
rs770690855 CA356542138 |
80 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1186143257 CA356542145 |
81 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1415062206 CA356542150 |
81 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA356542147 rs1186143257 |
81 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs541279648 CA93611070 |
82 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA356542170 rs984281570 |
83 | R>G | No |
ClinGen TOPMed |
|
|
rs1160612503 CA356542178 |
83 | R>Q | No |
ClinGen gnomAD |
|
|
rs1456037984 CA356542196 |
85 | R>C | No |
ClinGen gnomAD |
|
|
rs1577670456 CA356542215 |
86 | P>L | No |
ClinGen Ensembl |
|
|
rs1304798401 CA356542209 |
86 | P>S | No |
ClinGen gnomAD |
|
|
CA356542225 rs1201066112 |
87 | A>S | No |
ClinGen TOPMed |
|
|
CA356542226 rs1438431308 |
87 | A>V | No |
ClinGen TOPMed |
|
|
rs1372454611 CA356544844 |
91 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1410588917 CA356544850 |
92 | I>V | No |
ClinGen gnomAD |
|
|
CA356544883 rs1349722487 |
93 | G>A | No |
ClinGen gnomAD |
|
|
CA2877644 COSM3775772 rs766803963 |
95 | S>* | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
COSM257725 rs1380325430 CA356544986 |
97 | M>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA356544971 rs755001507 |
97 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755001507 CA2877646 |
97 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139854766 CA2877647 |
98 | N>D | No |
ClinGen ESP ExAC TOPMed |
|
|
rs139854766 CA356545007 |
98 | N>H | No |
ClinGen ESP ExAC TOPMed |
|
|
rs200989720 CA2877648 |
98 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1420487633 CA356545229 |
105 | E>Q | No |
ClinGen TOPMed |
|
|
CA356545277 rs1277828434 |
106 | F>Y | No |
ClinGen gnomAD |
|
|
rs1163151148 CA356545364 |
108 | D>G | No |
ClinGen gnomAD |
|
|
rs1205183766 CA356545329 |
108 | D>N | No |
ClinGen gnomAD |
|
|
CA356545406 rs1193452667 |
109 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1479923912 CA356545395 |
109 | I>V | No |
ClinGen gnomAD |
|
|
rs775274193 CA2877654 CA2877653 |
110 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA93619278 rs904302518 |
110 | M>L | No |
ClinGen TOPMed |
|
|
rs1427119288 CA356545465 |
111 | L>P | No |
ClinGen TOPMed |
|
|
CA356545523 rs768015752 |
113 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768015752 CA2877655 |
113 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1560372072 CA356545585 |
116 | A>T | No |
ClinGen Ensembl |
|
|
CA2877656 rs773940474 |
117 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 118 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2877657 rs761511829 |
119 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877658 rs761511829 |
119 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1463851186 CA356545705 |
121 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs142178268 CA2877660 |
124 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs766826915 CA2877661 |
126 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA356545798 rs1368033192 |
126 | I>M | No |
ClinGen gnomAD |
|
|
CA356545836 rs1560372107 |
129 | G>D | No |
ClinGen Ensembl |
|
|
CA356545918 rs1301001188 |
133 | S>N | No |
ClinGen gnomAD |
|
|
rs1343776022 CA356545938 |
134 | Y>C | No |
ClinGen gnomAD |
|
|
rs1577685467 CA356545987 |
136 | V>E | No |
ClinGen Ensembl |
|
|
rs1273225794 CA356545985 |
136 | V>M | No |
ClinGen gnomAD |
|
|
CA2877664 rs765193166 |
138 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1396337551 CA356546076 |
139 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1396337551 CA356546074 |
139 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA356547012 rs1449815548 |
142 | K>E | No |
ClinGen gnomAD |
|
|
rs369537010 CA93620098 |
143 | I>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA356547076 rs1292324560 |
144 | I>T | No |
ClinGen TOPMed |
|
|
rs373000940 CA2877687 |
144 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2877688 rs763006391 |
146 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA93620109 rs987734742 |
149 | P>T | No |
ClinGen TOPMed |
|
|
CA93620113 rs370555967 |
150 | K>T | No |
ClinGen Ensembl |
|
|
CA2877691 rs751745847 |
153 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356547324 rs1183141808 |
154 | P>A | No |
ClinGen gnomAD |
|
|
rs779662273 CA2877693 |
154 | P>L | No |
ClinGen ExAC |
|
|
rs1444305938 CA356547433 |
159 | N>S | No |
ClinGen gnomAD |
|
|
CA356547508 rs1236958496 |
165 | Y>C | No |
ClinGen gnomAD |
|
|
CA2877696 rs754808246 |
166 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1430538686 CA356547526 |
167 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA93620136 rs946487002 |
169 | V>F | No |
ClinGen gnomAD |
|
|
rs778993544 CA2877697 |
169 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356547548 rs946487002 |
169 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 169 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2877698 rs748157388 |
170 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1195902188 CA356547605 |
174 | C>F | No |
ClinGen TOPMed |
|
|
rs771687570 CA2877699 |
177 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356547661 rs116364038 |
179 | C>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA356547652 rs1560373452 |
179 | C>R | No |
ClinGen Ensembl |
|
|
rs1374312376 CA356547753 |
187 | L>R | No |
ClinGen gnomAD |
|
|
CA2877702 rs746603449 |
189 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs939472237 CA93620154 COSM1054640 |
190 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1278102356 CA356547791 |
191 | G>A | No |
ClinGen gnomAD |
|
|
rs758860209 CA93620165 |
193 | Y>* | No |
ClinGen Ensembl |
|
|
rs1279964622 CA356547809 |
193 | Y>C | No |
ClinGen gnomAD |
|
|
rs759938813 CA2877705 |
193 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
CA356547808 rs1279964622 |
193 | Y>S | No |
ClinGen gnomAD |
|
|
rs770114666 CA2877706 |
194 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA2877707 rs145564086 |
195 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1326411872 CA356547850 |
197 | N>K | No |
ClinGen TOPMed |
|
|
CA2877709 rs371233714 |
200 | H>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751658131 CA2877710 |
202 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1451271019 CA356547911 |
203 | I>T | No |
ClinGen gnomAD |
|
|
CA356547907 rs1560373583 |
203 | I>V | No |
ClinGen Ensembl |
|
|
CA2877711 rs761879315 |
207 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1168729262 CA356547963 |
207 | T>K | No |
ClinGen TOPMed |
|
|
CA356547989 rs1409482603 COSM1540107 |
208 | K>N | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs143490621 CA2877725 |
210 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1452134657 CA356548344 |
214 | S>N | No |
ClinGen gnomAD |
|
|
rs1190169231 CA356548372 |
216 | T>P | No |
ClinGen gnomAD |
|
|
CA356548377 rs1190169231 |
216 | T>S | No |
ClinGen gnomAD |
|
|
rs372410115 CA2877728 COSM1054642 |
221 | A>V | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA356532995 rs1406469366 |
222 | I>T | No |
ClinGen gnomAD |
|
|
rs767555392 CA2877730 |
224 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs115874249 CA2877731 |
224 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 225 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs548863079 CA2877732 |
226 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA356533034 rs1577688526 |
228 | R>S | No |
ClinGen Ensembl |
|
|
CA356533063 rs1187355970 |
232 | Y>F | No |
ClinGen gnomAD |
|
|
CA2877734 rs752564543 |
234 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356533073 rs1283254425 |
234 | L>V | No |
ClinGen TOPMed |
|
|
rs1267306528 CA356533100 |
238 | P>S | No |
ClinGen gnomAD |
|
|
CA356533107 rs1412940527 |
239 | K>E | No |
ClinGen TOPMed |
|
|
rs751507424 CA2877737 |
241 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA93578336 rs1015880854 |
242 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA2877738 rs568370797 |
244 | F>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2877739 rs780606732 |
245 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA93578362 rs988740404 |
246 | R>G | No |
ClinGen gnomAD |
|
|
rs1427574641 CA356533154 |
246 | R>K | No |
ClinGen gnomAD |
|
|
rs745490190 CA2877740 |
247 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA2877742 rs755781435 |
250 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs753549688 CA2877764 |
254 | G>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 258 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 259 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356533581 rs779189256 |
263 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA93580331 rs140773975 |
263 | Y>F | No |
ClinGen ESP gnomAD |
|
|
rs1208128425 CA356533601 |
265 | E>V | No |
ClinGen TOPMed |
|
|
CA93580332 rs1049526765 |
266 | A>T | No |
ClinGen Ensembl |
|
|
CA2877767 rs748650081 |
269 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs978612260 CA93580339 |
270 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
CA2877768 rs568117495 |
272 | K>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2877769 rs777853464 |
276 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1577690153 CA356533760 |
277 | P>T | No |
ClinGen Ensembl |
|
| TCGA novel | 278 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747092105 CA2877770 |
280 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1227075276 CA356533832 |
282 | I>V | No |
ClinGen TOPMed |
|
|
rs771191262 CA2877771 |
283 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs145898927 CA2877772 |
283 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA2877774 rs115610773 |
284 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143048917 RCV000201422 CA210237 |
287 | Q>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA93580432 rs911532872 |
288 | S>L | No |
ClinGen TOPMed |
|
|
CA356533881 rs1577690186 |
288 | S>P | No |
ClinGen Ensembl |
|
|
rs61757712 COSM1729781 CA2877776 |
292 | R>K | Variant assessed as Somatic; 0.0 impact. liver [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1453799263 CA356533918 |
293 | L>S | No |
ClinGen TOPMed |
|
|
rs1395858755 CA356533929 |
295 | I>V | No |
ClinGen gnomAD |
|
|
CA2877779 rs760167230 |
297 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA2877780 rs765925650 |
299 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs150678626 CA2877781 |
302 | N>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2877782 rs754656794 |
303 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs1044252874 COSM1429249 CA93581653 |
305 | R>G | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1439664046 CA356534019 |
306 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA93581662 rs928502363 COSM3428445 |
308 | D>E | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1300892112 CA356534065 |
312 | V>A | No |
ClinGen gnomAD |
|
|
rs1480373509 CA356534067 |
313 | R>G | No |
ClinGen gnomAD |
|
|
rs764591537 CA356534080 |
314 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1577691240 CA356534085 |
315 | E>G | No |
ClinGen Ensembl |
|
|
CA2877804 rs752071916 |
315 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877805 rs757860778 |
317 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356534115 rs1284985795 |
319 | C>Y | No |
ClinGen TOPMed |
|
|
CA2877806 rs781358573 |
320 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356534135 rs1372309948 |
322 | E>K | No |
ClinGen TOPMed |
|
|
CA2877808 rs756281476 |
322 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs1297875230 COSM3696609 CA356534159 |
325 | H>Y | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA356534166 rs1402551224 |
326 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 327 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs538165565 CA2877872 |
330 | W>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA356534681 rs1577693890 |
334 | E>D | No |
ClinGen Ensembl |
|
|
CA2877875 rs780225178 |
334 | E>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 336 | F>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs989078071 CA93584007 |
340 | I>T | No |
ClinGen TOPMed |
|
|
rs749434996 CA93584020 |
343 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356534807 rs1409922347 |
343 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA2877876 rs749434996 |
343 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs138879345 CA2877878 |
346 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2877877 rs138879345 |
346 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1437680267 CA356534856 |
347 | L>V | No |
ClinGen TOPMed |
|
|
CA2877879 rs746813076 |
349 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs1197225643 CA356534879 |
349 | F>V | No |
ClinGen TOPMed |
|
|
CA356534892 rs1345337473 |
350 | P>S | No |
ClinGen TOPMed |
|
|
CA2877880 rs554715631 |
351 | F>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2877882 rs745856219 |
353 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769145807 CA2877883 |
354 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1234402086 CA356534978 |
358 | R>G | No |
ClinGen TOPMed |
|
|
rs775087370 CA2877884 |
358 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs574721000 CA2877885 |
359 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 360 | Y>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs768335792 CA2877906 |
361 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877907 rs774122949 |
366 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs1409928954 CA356536027 |
367 | L>F | No |
ClinGen gnomAD |
|
|
rs369722569 CA2877908 |
367 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356536053 rs772528277 |
369 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772528277 CA2877909 |
369 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356536091 rs1344285535 |
371 | K>N | No |
ClinGen TOPMed |
|
|
CA2877911 rs761033072 |
372 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs759806533 CA93587400 |
373 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs373464866 CA2877913 |
379 | R>K | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 381 | L>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs537395852 CA2877914 |
383 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1424684153 CA356536265 |
385 | Y>N | No |
ClinGen TOPMed |
|
|
rs758640377 CA2877917 |
387 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA356536319 rs1469703471 |
388 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA356536326 rs1213916420 |
389 | M>V | No |
ClinGen gnomAD |
|
|
rs780792498 CA2877918 |
391 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1420003037 CA356536406 |
394 | D>A | No |
ClinGen gnomAD |
|
|
rs750236546 CA2877919 |
395 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs755925769 CA356536437 |
396 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2877920 rs755925769 |
396 | C>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 399 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2877921 rs780023892 |
400 | Y>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 401 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749285941 CA2877922 |
402 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs768247821 CA2877923 |
404 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs766125111 CA2877938 |
406 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs755914963 CA2877937 |
406 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA93587772 rs971917382 |
411 | K>N | No |
ClinGen Ensembl |
|
|
rs1261012532 CA356537506 |
412 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 414 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA356537582 rs1349526433 |
416 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1478573764 CA356537599 |
417 | Q>* | No |
ClinGen TOPMed |
|
|
CA2877939 rs753789732 |
417 | Q>R | No |
ClinGen ExAC |
|
|
CA2877940 rs374999824 |
420 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA356537679 rs1340022982 |
421 | M>I | No |
ClinGen gnomAD |
|
|
rs778509196 CA2877941 |
422 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA356537719 rs1486269884 |
422 | R>M | No |
ClinGen gnomAD |
|
|
rs1187915010 CA356537734 |
422 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1242918335 CA356537775 |
423 | G>D | No |
ClinGen gnomAD |
|
|
CA93594156 rs946033302 |
425 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA356539481 rs1357295202 |
428 | L>H | No |
ClinGen gnomAD |
|
|
rs774600733 CA2877955 |
429 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA2877956 rs761970953 |
429 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs766150246 CA2877957 |
430 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA356539584 rs1305249045 |
433 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA356539585 rs1305249045 |
433 | R>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1371292760 CA356539589 |
434 | D>N | No |
ClinGen gnomAD |
|
|
CA2877960 rs200215448 |
435 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1205891755 CA356540456 |
443 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA2877962 rs757906689 |
444 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs889617319 CA93594231 |
444 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs777191146 CA2877963 |
445 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356540590 rs1253804601 |
448 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs116190725 CA2877964 |
449 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs374694979 CA2877966 |
451 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs746222667 CA2877967 |
451 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs374694979 CA356540652 |
451 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775953911 CA2877969 |
455 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA356540752 rs1560383008 |
455 | G>R | No |
ClinGen Ensembl |
|
|
rs1327674265 CA356540806 |
458 | G>C | No |
ClinGen gnomAD |
|
|
CA2877971 rs768738939 |
459 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs116488560 CA2877970 |
459 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA356540864 rs1417878396 |
464 | S>G | No |
ClinGen TOPMed |
|
|
rs1170442936 CA356540876 |
465 | N>D | No |
ClinGen TOPMed |
|
|
CA2877974 rs772428665 |
465 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA356540892 rs1295571367 |
466 | S>F | No |
ClinGen gnomAD |
|
|
rs1577703421 CA356540907 |
468 | T>P | No |
ClinGen Ensembl |
|
|
CA356540923 rs1316611977 |
469 | Q>R | No |
ClinGen gnomAD |
|
|
CA93594298 rs946100415 |
470 | T>A | No |
ClinGen gnomAD |
|
|
CA2877975 rs773635308 |
470 | T>N | No |
ClinGen ExAC gnomAD |
|
|
CA2877976 rs759395271 |
472 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA2877977 rs765176136 |
473 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs546683378 CA2877978 |
474 | R>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA93594333 rs977476907 |
475 | K>R | No |
ClinGen Ensembl |
|
|
CA356541019 rs1196769393 |
478 | F>S | No |
ClinGen TOPMed |
|
|
rs1223738167 CA356541047 |
481 | W>* | No |
ClinGen TOPMed |
|
| TCGA novel | 481 | W>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
No associated diseases with Q8TCG2
1 regional properties for Q8TCG2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Phosphatidylinositol 3-/4-kinase, catalytic domain | 120 - 451 | IPR000403 |
Functions
| Description | ||
|---|---|---|
| EC Number | 2.7.1.67 | Phosphotransferases with an alcohol group as acceptor |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| early endosome membrane | The lipid bilayer surrounding an early endosome. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| endosome | A vacuole to which materials ingested by endocytosis are delivered. |
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| trans-Golgi network | The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| 1-phosphatidylinositol 4-kinase activity | Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol + ATP = 1-phosphatidyl-1D-myo-inositol 4-phosphate + ADP + 2 H(+). |
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| endosome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes. |
| Golgi organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus. |
| phosphatidylinositol biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol. |
| phosphatidylinositol phosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidylinositol phosphate. |
| phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. |
9 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5ZIK0 | PI4K2B | Phosphatidylinositol 4-kinase type 2-beta | Gallus gallus (Chicken) | PR |
| Q9BTU6 | PI4K2A | Phosphatidylinositol 4-kinase type 2-alpha | Homo sapiens (Human) | PR |
| Q2TBE6 | Pi4k2a | Phosphatidylinositol 4-kinase type 2-alpha | Mus musculus (Mouse) | PR |
| Q8CBQ5 | Pi4k2b | Phosphatidylinositol 4-kinase type 2-beta | Mus musculus (Mouse) | PR |
| Q5XIL2 | Pi4k2b | Phosphatidylinositol 4-kinase type 2-beta | Rattus norvegicus (Rat) | PR |
| Q99M64 | Pi4k2a | Phosphatidylinositol 4-kinase type 2-alpha | Rattus norvegicus (Rat) | PR |
| Q505I0 | pi4k2a | Phosphatidylinositol 4-kinase type 2-alpha | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| Q28G26 | pi4k2b | Phosphatidylinositol 4-kinase type 2-beta | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| Q6PE18 | pi4k2a | Phosphatidylinositol 4-kinase type 2-alpha | Danio rerio (Zebrafish) (Brachydanio rerio) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEDPSEPDRL | ASADGGSPEE | EEDGEREPLL | PRIAWAHPRR | GAPGSAVRLL | DAAGEEGEAG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DEELPLPPGD | VGVSRSSSAE | LDRSRPAVSV | TIGTSEMNAF | LDDPEFADIM | LRAEQAIEVG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| IFPERISQGS | SGSYFVKDPK | RKIIGVFKPK | SEEPYGQLNP | KWTKYVHKVC | CPCCFGRGCL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IPNQGYLSEA | GAYLVDNKLH | LSIVPKTKVV | WLVSETFNYN | AIDRAKSRGK | KYALEKVPKV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GRKFHRIGLP | PKIGSFQLFV | EGYKEAEYWL | RKFEADPLPE | NIRKQFQSQF | ERLVILDYII |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RNTDRGNDNW | LVRYEKQKCE | KEIDHKESKW | IDDEEFLIKI | AAIDNGLAFP | FKHPDEWRAY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| PFHWAWLPQA | KVPFSEEIRN | LILPYISDMN | FVQDLCEDLY | ELFKTDKGFD | KATFESQMSV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| MRGQILNLTQ | ALRDGKSPFQ | LVQIPCVIVE | RSQGGSQGRI | VHLSNSFTQT | VNCRKPFFSS |
| W |