Q8NAA4
Gene name |
ATG16L2 (WDR80) |
Protein name |
Protein Atg16l2 |
Names |
APG16-like 2, Autophagy-related protein 16-2, WD repeat-containing protein 80 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:89849 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q8NAA4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q8NAA4-F1 | Predicted | AlphaFoldDB |
550 variants for Q8NAA4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA381787687 rs1343988610 |
2 | A>V | No |
ClinGen gnomAD |
|
|
rs1252172656 CA381787714 |
4 | P>L | No |
ClinGen gnomAD |
|
|
rs1252172656 CA381787713 |
4 | P>R | No |
ClinGen gnomAD |
|
|
CA224460235 rs988447741 |
5 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1375707673 CA381787719 |
5 | G>D | No |
ClinGen TOPMed |
|
|
CA224460240 rs548699072 |
6 | V>F | No |
ClinGen 1000Genomes gnomAD |
|
|
rs548699072 CA224460237 |
6 | V>I | No |
ClinGen 1000Genomes gnomAD |
|
|
CA381787725 rs548699072 |
6 | V>L | No |
ClinGen 1000Genomes gnomAD |
|
|
rs749696419 CA6174749 |
7 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA381787737 rs1427588441 |
7 | P>S | No |
ClinGen TOPMed |
|
|
CA381787743 rs1376326939 |
8 | G>S | No |
ClinGen gnomAD |
|
|
rs568739118 CA224460247 |
9 | A>G | No |
ClinGen 1000Genomes gnomAD |
|
|
rs1465810842 CA381787758 |
9 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1465810842 CA381787755 |
9 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA381787768 rs1478113736 |
10 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381787783 rs769087083 |
11 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA6174750 rs769087083 |
11 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs774060355 CA6174751 |
13 | R>C | No |
ClinGen ExAC |
|
|
rs942206610 CA224460257 |
15 | K>E | No |
ClinGen Ensembl |
|
|
CA6174752 rs143300353 |
16 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381787848 rs143300353 |
16 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6174753 rs143300353 |
16 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs11235600 CA224460264 |
17 | H>Y | No |
ClinGen TOPMed |
|
|
CA381787904 rs1346221433 |
20 | R>G | No |
ClinGen gnomAD |
|
|
rs1406735849 CA381787909 |
20 | R>Q | No |
ClinGen gnomAD |
|
|
rs772633981 CA6174754 |
22 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA381787954 rs1330326692 |
24 | L>F | No |
ClinGen gnomAD |
|
|
rs1252710241 CA381787996 |
28 | T>M | No |
ClinGen gnomAD |
|
|
CA381787994 rs1252710241 |
28 | T>R | No |
ClinGen gnomAD |
|
|
CA224460285 rs753716870 |
32 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs759329092 CA6174758 |
32 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA6174757 rs753716870 |
32 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA381788063 rs1490688985 |
35 | E>V | No |
ClinGen gnomAD |
|
|
rs947148866 CA224460291 |
37 | V>M | No |
ClinGen TOPMed |
|
|
CA224460295 rs868347219 |
38 | P>S | No |
ClinGen Ensembl |
|
|
rs922149168 CA224460300 |
39 | A>S | No |
ClinGen TOPMed |
|
|
rs1194272194 CA381788101 |
40 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA6174779 rs765200178 |
42 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA6174778 rs759527212 |
42 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA224461580 rs1018877956 |
43 | L>R | No |
ClinGen Ensembl |
|
|
CA224461574 rs1007316234 |
43 | L>V | No |
ClinGen Ensembl |
|
|
CA381788414 rs1201014072 |
45 | E>G | No |
ClinGen TOPMed |
|
|
CA6174781 rs372509129 |
47 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756268984 CA6174784 |
52 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs1591292775 CA381788534 |
57 | L>R | No |
ClinGen Ensembl |
|
|
rs138450793 CA6174786 |
57 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6174787 rs755474307 |
58 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381788539 rs1180336012 |
58 | Q>P | No |
ClinGen gnomAD |
|
|
CA6174788 rs201930699 |
59 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs866148818 CA224461600 |
60 | E>* | No |
ClinGen Ensembl |
|
|
CA381788573 rs1413164582 |
61 | P>R | No |
ClinGen TOPMed |
|
|
rs758731122 CA6174791 |
63 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA381788597 rs1456517544 |
63 | S>N | No |
ClinGen gnomAD |
|
|
CA381788609 rs1349413971 |
64 | V>D | No |
ClinGen gnomAD |
|
|
rs144002516 CA6174793 |
67 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs180875949 CA6174795 |
69 | H>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs180875949 CA6174794 |
69 | H>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1373454585 CA381788675 |
70 | Q>H | No |
ClinGen gnomAD |
|
|
rs200728373 CA6174796 |
70 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6174798 rs775449948 |
72 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA6174799 rs762673462 |
73 | W>G | No |
ClinGen ExAC gnomAD |
|
|
rs1190356665 CA381771943 |
74 | E>K | No |
ClinGen gnomAD |
|
|
rs776932302 CA6174822 |
75 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs911436256 CA224434821 |
77 | E>G | No |
ClinGen Ensembl |
|
|
CA6174823 rs759537329 |
77 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA224434824 rs965768111 |
78 | L>F | No |
ClinGen Ensembl |
|
|
rs765422473 CA6174824 |
81 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs765422473 CA6174825 |
81 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs763563880 CA6174826 |
84 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs762416026 CA224434844 |
85 | S>A | No |
ClinGen Ensembl |
|
|
rs751952468 CA6174828 |
87 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381772215 rs751952468 |
87 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381772226 rs1366334064 |
88 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1341581403 CA381772290 CA381772288 |
90 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381772322 rs1291956853 |
92 | K>T | No |
ClinGen gnomAD |
|
|
rs1220737341 CA381772358 |
93 | W>C | No |
ClinGen gnomAD |
|
|
rs750028212 CA6174832 |
94 | Q>K | No |
ClinGen ExAC TOPMed |
|
|
rs1242530053 CA381772373 |
94 | Q>R | No |
ClinGen gnomAD |
|
|
CA6174833 rs200746293 |
95 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs913204989 CA224434852 |
95 | E>Q | No |
ClinGen Ensembl |
|
|
rs768741849 CA6174836 |
96 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs748729101 CA6174835 |
96 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs778942205 CA6174837 |
97 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1410986352 CA381772432 |
97 | E>K | No |
ClinGen gnomAD |
|
|
CA6174838 rs747967304 |
98 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA6174839 rs771922954 |
99 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs769884957 CA6174842 |
101 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs532590002 COSM3398120 CA6174841 |
101 | R>W | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA381772535 rs1286099261 |
104 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA381774417 rs1447746468 |
108 | A>T | No |
ClinGen gnomAD |
|
|
rs1169899023 CA381774428 |
108 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 110 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381774461 rs1207317233 |
110 | Q>H | No |
ClinGen TOPMed |
|
|
CA381774469 rs1459417450 |
111 | V>L | No |
ClinGen gnomAD |
|
|
CA224437216 rs201700689 |
114 | K>E | No |
ClinGen 1000Genomes |
|
|
CA381774552 rs1482476907 |
115 | G>S | No |
ClinGen TOPMed |
|
|
CA224437218 rs1014002980 |
116 | A>V | No |
ClinGen TOPMed |
|
|
rs1291693966 CA381774585 |
117 | A>T | No |
ClinGen gnomAD |
|
|
rs754669980 CA6174872 |
118 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381774616 rs1251145111 |
119 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381774635 rs1433891635 |
121 | L>M | No |
ClinGen gnomAD |
|
|
rs752231293 CA381774681 |
123 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1591301105 CA381774674 |
123 | S>A | No |
ClinGen Ensembl |
|
|
CA6174874 rs752231293 |
123 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1383750817 CA381774694 |
124 | E>Q | No |
ClinGen TOPMed |
|
|
rs1322973231 CA381774740 |
126 | Q>R | No |
ClinGen gnomAD |
|
|
rs1247652567 CA381774757 |
127 | Q>* | No |
ClinGen gnomAD |
|
|
rs529570599 CA224437235 |
127 | Q>H | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs758449802 CA6174875 |
127 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1047035864 CA224437236 |
129 | Q>* | No |
ClinGen TOPMed |
|
|
rs1047035864 CA381774796 |
129 | Q>K | No |
ClinGen TOPMed |
|
|
CA381774983 rs1193908628 |
133 | A>V | No |
ClinGen TOPMed |
|
|
rs777038938 CA6174890 |
134 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA6174891 rs759309439 |
135 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA381775045 rs1208280165 |
137 | A>G | No |
ClinGen gnomAD |
|
|
CA381775068 rs1279761361 |
138 | R>H | No |
ClinGen gnomAD |
|
|
rs866720452 CA224437643 |
138 | R>S | No |
ClinGen Ensembl |
|
|
CA381775083 rs1198616759 |
139 | V>A | No |
ClinGen TOPMed |
|
|
CA6174893 rs752286622 CA381775078 |
139 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1249439253 CA381775101 |
140 | A>V | No |
ClinGen gnomAD |
|
|
CA6174895 rs764106685 |
143 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751388517 CA6174896 |
143 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751388517 CA224437673 |
143 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1297133062 CA381775171 |
144 | E>G | No |
ClinGen TOPMed |
|
|
rs757217013 CA6174897 |
144 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs780909362 CA6174898 |
145 | A>T | No |
ClinGen ExAC |
|
|
rs745808792 CA224437705 |
146 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6174900 rs755237867 |
146 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA381775210 rs1431062828 |
147 | A>T | No |
ClinGen gnomAD |
|
|
rs1310395724 CA381775229 |
148 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 149 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6174902 rs779071640 |
150 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1294556210 CA381775274 |
151 | Q>* | No |
ClinGen gnomAD |
|
|
CA381775286 rs1370147387 |
151 | Q>H | No |
ClinGen gnomAD |
|
|
rs1302899695 CA381775305 |
152 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1232435238 CA381775298 |
152 | Q>R | No |
ClinGen gnomAD |
|
|
CA381775313 rs1342964754 |
153 | V>L | No |
ClinGen gnomAD |
|
|
rs1230626042 CA381775338 |
154 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1270951409 CA381775348 |
155 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
CA6174904 rs1555032600 |
156 | W>* | No |
ClinGen Ensembl |
|
|
CA224437734 rs908322564 |
156 | W>G | No |
ClinGen TOPMed gnomAD |
|
|
CA381775365 rs908322564 |
156 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
CA381775380 rs1222174247 |
157 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs771975030 CA6174906 |
157 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381775381 rs1222174247 |
157 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA224437761 rs1014015841 |
160 | N>D | No |
ClinGen Ensembl |
|
|
rs866743394 CA224437768 |
160 | N>K | No |
ClinGen TOPMed |
|
|
CA381775452 rs1591302061 |
162 | V>A | No |
ClinGen Ensembl |
|
|
rs1166238586 CA381775464 |
163 | Q>P | No |
ClinGen gnomAD |
|
|
rs1166238586 CA381775467 |
163 | Q>R | No |
ClinGen gnomAD |
|
|
CA381775485 rs1166084942 |
164 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA381775481 rs1166084942 |
164 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381775478 rs1409939452 |
164 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA381775494 rs1439072715 |
165 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA224437829 rs961962988 |
165 | A>T | No |
ClinGen TOPMed |
|
|
CA381775499 rs1439072715 |
165 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA224437843 rs973283789 |
166 | A>S | No |
ClinGen Ensembl |
|
|
rs777175160 CA6174911 |
167 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs930896831 CA381775531 |
168 | E>K | No |
ClinGen TOPMed |
|
|
rs930896831 CA224437860 |
168 | E>Q | No |
ClinGen TOPMed |
|
|
rs1437540307 CA381775572 |
169 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA6174913 rs769592479 |
170 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA381775591 rs1315317345 |
171 | R>S | No |
ClinGen TOPMed |
|
|
CA6174914 rs775225390 |
173 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA381775620 rs1291886278 |
173 | H>N | No |
ClinGen gnomAD |
|
|
CA381775639 rs1212780396 |
173 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381775645 rs1248396813 |
174 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA381775683 rs1186248391 |
176 | L>F | No |
ClinGen gnomAD |
|
|
rs1347821647 CA381775718 |
178 | E>G | No |
ClinGen gnomAD |
|
|
rs1161301436 CA381775705 |
178 | E>K | No |
ClinGen TOPMed |
|
|
rs868603536 CA381775755 |
180 | A>S | No |
ClinGen gnomAD |
|
|
CA224437888 rs868603536 |
180 | A>T | No |
ClinGen gnomAD |
|
|
CA6174916 rs763579653 |
180 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA224437897 rs889133952 |
182 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1460323891 CA381775797 |
183 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
CA224437910 rs1027770518 |
187 | E>D | No |
ClinGen gnomAD |
|
|
CA6174917 rs771836595 |
188 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1459064585 CA381775900 |
188 | A>T | No |
ClinGen gnomAD |
|
|
rs767460946 CA6174919 |
189 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381775913 rs767460946 |
189 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1228152879 CA381775931 |
190 | D>A | No |
ClinGen TOPMed |
|
|
rs750253711 CA6174920 |
192 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1353552282 CA381775990 |
193 | E>G | No |
ClinGen gnomAD |
|
|
CA381776011 rs1591302464 |
194 | R>M | No |
ClinGen Ensembl |
|
|
CA381776022 rs1232600501 |
195 | L>I | No |
ClinGen gnomAD |
|
|
rs755859265 CA6174921 |
196 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381776088 rs1295679996 |
198 | R>P | No |
ClinGen TOPMed |
|
|
rs944873805 CA224437945 |
199 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1283076460 CA381776105 |
199 | K>R | No |
ClinGen gnomAD |
|
|
CA381776153 rs1348095465 |
201 | R>P | No |
ClinGen TOPMed |
|
|
CA381776137 rs1189083141 |
201 | R>S | No |
ClinGen gnomAD |
|
|
CA381776202 rs1355981416 |
204 | A>G | No |
ClinGen TOPMed |
|
|
rs1474534305 CA381776234 |
206 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
rs957189286 CA224437948 |
207 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1418240058 CA381776255 |
207 | N>I | No |
ClinGen TOPMed |
|
|
rs957189286 CA381776248 |
207 | N>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA381776269 rs1453851026 |
208 | L>Q | No |
ClinGen gnomAD |
|
|
rs779108506 CA6174923 |
208 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1473753904 CA381776282 |
209 | R>H | No |
ClinGen gnomAD |
|
|
CA6174924 rs752980963 |
210 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1384458250 CA381776310 |
211 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA381776311 rs1384458250 |
211 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA381776321 rs1415244170 |
212 | R>C | No |
ClinGen gnomAD |
|
|
CA381776323 rs1336320437 |
212 | R>H | No |
ClinGen gnomAD |
|
|
CA381776317 rs1415244170 |
212 | R>S | No |
ClinGen gnomAD |
|
|
rs758631087 CA224437960 |
213 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs758631087 CA6174925 |
213 | R>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 214 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs914060033 CA381776355 |
215 | R>W | No |
ClinGen gnomAD |
|
|
CA381777040 rs1166980249 |
216 | A>S | No |
ClinGen TOPMed |
|
| TCGA novel | 216 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771688111 CA6174978 |
217 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA381777055 rs1565264722 |
217 | K>R | No |
ClinGen Ensembl |
|
|
rs772746188 CA6174979 |
218 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA224438319 rs200456427 |
219 | A>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA6174981 VAR_043605 rs11235604 |
220 | R>W | No |
ClinGen UniProt 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs1333713990 CA381777126 |
224 | E>K | No |
ClinGen gnomAD |
|
|
CA381777141 rs1484941424 |
225 | L>V | No |
ClinGen gnomAD |
|
|
CA6174983 rs776573775 |
226 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA6174984 rs759253273 |
227 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1416927182 CA381777169 |
227 | K>N | No |
ClinGen gnomAD |
|
|
CA6174985 rs769697470 |
227 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381777206 rs1160850006 |
231 | R>Q | No |
ClinGen gnomAD |
|
|
CA224438333 rs148743255 |
231 | R>W | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA381777244 rs1302958450 |
235 | I>V | No |
ClinGen gnomAD |
|
|
CA6175007 rs775402637 |
238 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772451287 CA6175009 |
239 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381777340 rs1230978959 |
240 | D>N | No |
ClinGen gnomAD |
|
|
rs1027049563 CA224438543 |
241 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1591304131 CA381777348 |
241 | T>P | No |
ClinGen Ensembl |
|
|
CA381777364 rs1191447162 |
244 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs865847567 CA224438544 |
245 | G>W | No |
ClinGen Ensembl |
|
|
CA6175010 rs773498117 |
246 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1347218247 CA381777393 |
248 | E>Q | No |
ClinGen TOPMed |
|
|
CA224438554 rs150821280 |
249 | R>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150821280 CA6175011 |
249 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175012 rs766551326 |
250 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381777416 rs1416729973 |
251 | E>D | No |
ClinGen gnomAD |
|
|
rs985579249 CA224438558 |
251 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1565265251 CA381777420 |
252 | T>A | No |
ClinGen Ensembl |
|
|
CA381777429 rs1326849993 |
253 | L>M | No |
ClinGen gnomAD |
|
|
rs751650269 CA224438573 |
253 | L>P | No |
ClinGen gnomAD |
|
|
CA381777441 rs1362686328 |
254 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1362686328 CA381777443 |
254 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs910723203 CA224438576 |
256 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs538481822 CA224438578 |
257 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1222093984 CA381777469 |
257 | P>L | No |
ClinGen gnomAD |
|
|
CA224438594 rs868141371 |
258 | E>* | No |
ClinGen Ensembl |
|
|
rs760141265 CA6175016 |
261 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA224438596 rs966158011 |
263 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs931369825 CA224438597 |
264 | K>E | No |
ClinGen TOPMed |
|
|
rs538460355 CA381777576 |
267 | C>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs538460355 CA6175017 |
267 | C>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA6175018 rs753093468 |
269 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs976316794 CA224438614 |
269 | K>T | No |
ClinGen TOPMed |
|
|
CA381777615 rs1409871659 |
270 | W>* | No |
ClinGen gnomAD |
|
|
CA381777636 rs1397132030 |
272 | R>G | No |
ClinGen gnomAD |
|
|
CA381777649 rs1460088505 |
273 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA381778141 rs1263944851 |
277 | A>G | No |
ClinGen gnomAD |
|
|
rs774719029 CA6175058 |
277 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381778143 rs1426723934 |
278 | S>A | No |
ClinGen gnomAD |
|
|
CA381778148 rs1192780998 |
278 | S>L | No |
ClinGen gnomAD |
|
|
CA6175059 rs762042459 |
279 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1476042867 CA381778157 |
280 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1591306764 CA381778154 |
280 | T>P | No |
ClinGen Ensembl |
|
|
rs139269726 CA6175062 |
283 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6175063 rs139269726 |
283 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224439562 rs970386752 |
284 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 286 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778956881 CA6175066 |
286 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs780009142 CA224439579 |
287 | C>R | No |
ClinGen gnomAD |
|
|
rs780009142 CA381778192 |
287 | C>S | No |
ClinGen gnomAD |
|
|
rs1291790302 CA381778199 |
288 | V>M | No |
ClinGen gnomAD |
|
|
CA381778209 rs1240012909 |
289 | D>G | No |
ClinGen gnomAD |
|
|
CA381778205 rs1190962255 |
289 | D>N | No |
ClinGen TOPMed |
|
|
CA381778217 rs1262583191 |
290 | V>A | No |
ClinGen gnomAD |
|
|
CA6175068 rs752543316 |
291 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381778227 rs1248928500 |
292 | K>T | No |
ClinGen TOPMed |
|
|
CA224439597 rs79145554 |
296 | D>G | No |
ClinGen Ensembl |
|
| TCGA novel | 296 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs921283070 CA224440241 |
297 | F>C | No |
ClinGen TOPMed |
|
|
CA6175092 rs756350179 |
298 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 298 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 299 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs780207822 CA6175094 |
300 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs749372930 CA6175095 |
300 | R>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1446321059 CA381778294 |
300 | R>S | No |
ClinGen gnomAD |
|
|
rs977682407 CA224440272 |
304 | S>* | No |
ClinGen Ensembl |
|
|
rs536115700 CA6175098 |
305 | I>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1565267577 CA381778325 |
305 | I>M | No |
ClinGen Ensembl |
|
|
rs199726953 CA381778323 |
305 | I>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs199726953 CA6175099 |
305 | I>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs536115700 CA381778322 |
305 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs144118330 CA224440283 |
306 | G>W | No |
ClinGen 1000Genomes |
|
|
rs761084631 CA6175102 |
307 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA224440293 rs936233321 |
307 | G>R | No |
ClinGen Ensembl |
|
|
CA6175103 rs201600699 |
310 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6175105 rs759250549 |
312 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759250549 CA381778362 |
312 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175106 rs764908171 |
312 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1159249344 CA381778375 |
314 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs752221997 CA6175107 |
317 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1425146363 CA381778401 |
318 | V>L | No |
ClinGen gnomAD |
|
|
rs1425146363 CA381778400 |
318 | V>M | No |
ClinGen gnomAD |
|
|
CA6175108 RCV000962198 rs77419620 |
319 | C>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs77419620 CA224440312 |
319 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 321 | A>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM1676283 CA6175109 rs764043252 |
323 | R>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs369306828 CA6175110 |
323 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs766599053 CA6175112 |
327 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175113 rs766599053 |
327 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146520723 CA6175111 |
327 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM545070 rs1565267692 CA381778458 |
328 | A>V | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
CA381778461 rs1434329834 |
329 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs755184931 CA6175114 |
329 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA381778471 rs1169823839 |
330 | D>E | No |
ClinGen TOPMed |
|
|
CA6175115 rs531275476 |
330 | D>N | No |
ClinGen 1000Genomes ExAC |
|
|
CA6175116 rs748213121 |
331 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6175118 rs778279430 |
332 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA224440335 rs146474296 |
332 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6175147 rs773844965 |
333 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs761774058 CA6175148 |
334 | A>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 335 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA381778511 rs1418864112 |
335 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA381778506 rs1156909420 |
335 | H>Y | No |
ClinGen gnomAD |
|
|
rs899774907 CA224440691 |
337 | S>P | No |
ClinGen Ensembl |
|
|
rs767416718 CA6175150 |
338 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA224440703 rs896289231 |
340 | N>D | No |
ClinGen TOPMed |
|
|
rs201429666 CA6175151 |
340 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 341 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1446841375 CA381778548 |
342 | V>I | No |
ClinGen gnomAD |
|
|
rs1446841375 CA381778549 |
342 | V>L | No |
ClinGen gnomAD |
|
|
rs143377298 CA6175153 |
343 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143377298 CA6175152 |
343 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175154 rs61738587 |
343 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6175155 rs764311420 |
347 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1284644840 CA381778585 |
348 | S>G | No |
ClinGen gnomAD |
|
|
rs1353696863 CA381778587 |
348 | S>N | No |
ClinGen gnomAD |
|
|
CA381778591 rs1212155720 |
348 | S>R | No |
ClinGen gnomAD |
|
|
rs757862655 CA6175157 |
350 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1223432805 CA381778615 |
352 | A>V | No |
ClinGen TOPMed |
|
|
CA6175158 rs781750008 |
353 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA6175161 rs780267490 |
355 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA224440732 rs1006329810 |
356 | A>D | No |
ClinGen TOPMed |
|
|
CA6175162 rs749034330 |
357 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs768160673 CA381778644 COSM1242017 |
358 | R>C | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs768160673 CA381778645 |
358 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA6175164 rs778439980 |
358 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768160673 CA6175163 |
358 | R>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 359 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1336925477 CA381778656 |
360 | I>N | No |
ClinGen TOPMed |
|
|
rs1309730589 CA381778665 |
361 | H>R | No |
ClinGen TOPMed |
|
|
rs376493601 CA6175165 |
362 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA6175167 rs370112019 |
364 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175168 rs760518536 |
365 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1277070796 CA381778696 |
366 | V>L | No |
ClinGen gnomAD |
|
|
rs1277070796 CA381778694 |
366 | V>M | No |
ClinGen gnomAD |
|
|
CA6175169 rs770828941 |
367 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs761289753 CA6175195 COSM931756 |
369 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA6175196 rs374124705 |
369 | R>H | No |
ClinGen ESP ExAC TOPMed |
|
|
rs374124705 CA381778727 |
369 | R>L | No |
ClinGen ESP ExAC TOPMed |
|
|
CA6175199 rs377424006 |
374 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 374 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6175200 rs765575560 |
375 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381778764 rs765575560 |
375 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752417065 CA381778780 |
377 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758019259 CA381778791 |
379 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758019259 CA6175202 |
379 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381778794 rs1202895402 |
380 | G>D | No |
ClinGen TOPMed |
|
|
rs921873055 CA224441381 |
380 | G>S | No |
ClinGen TOPMed |
|
|
CA6175203 rs777392140 |
383 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs986648268 CA224441382 |
384 | T>I | No |
ClinGen Ensembl |
|
|
rs931895562 CA224441383 |
390 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs769689284 CA224441386 |
391 | S>L | No |
ClinGen gnomAD |
|
|
rs763616318 CA6175221 |
392 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763616318 CA381778885 |
392 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369120388 CA6175222 |
398 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs780738066 CA6175224 |
399 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA381778931 rs1177244647 |
399 | T>I | No |
ClinGen TOPMed |
|
|
CA6175227 rs780039646 |
400 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs199542942 CA6175226 |
400 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA381778942 rs1374675645 |
401 | N>S | No |
ClinGen gnomAD |
|
|
rs1591311469 CA381778962 |
404 | A>T | No |
ClinGen Ensembl |
|
|
rs1591311503 CA381779001 |
409 | V>G | No |
ClinGen Ensembl |
|
|
rs948302785 CA224441641 |
409 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA6175232 rs770985644 |
410 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA6175233 rs776745903 |
411 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs760089327 CA6175234 |
412 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA381779016 rs1565269828 |
412 | A>V | No |
ClinGen Ensembl |
|
|
CA381779040 CA381779039 rs373191976 |
415 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 416 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs766430064 CA6175263 |
416 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs142581537 CA6175266 |
418 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224441850 rs938436619 |
422 | K>R | No |
ClinGen Ensembl |
|
|
CA381779117 rs1319364345 |
425 | V>G | No |
ClinGen gnomAD |
|
|
rs1291412222 CA381779114 |
425 | V>M | No |
ClinGen gnomAD |
|
| TCGA novel | 430 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1194932964 CA381779159 |
431 | K>N | No |
ClinGen TOPMed |
|
|
CA6175267 rs368086033 |
431 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175268 rs370896555 |
433 | T>M | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1196372496 CA381779172 |
434 | R>K | No |
ClinGen gnomAD |
|
|
CA381779180 rs1591311940 |
435 | H>P | No |
ClinGen Ensembl |
|
|
rs1310479733 CA381779178 |
435 | H>Y | No |
ClinGen gnomAD |
|
|
rs1261462714 CA381779196 |
437 | A>E | No |
ClinGen gnomAD |
|
|
rs781326474 CA6175270 |
442 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1038381116 CA224441883 |
442 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA6175272 rs769922001 |
443 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175274 rs749797227 |
444 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA6175277 rs748501059 |
448 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA381779269 rs1591312027 |
449 | W>G | No |
ClinGen Ensembl |
|
|
CA381779282 rs1328262527 |
450 | D>E | No |
ClinGen TOPMed |
|
|
CA381779276 rs1565270315 |
450 | D>N | No |
ClinGen Ensembl |
|
|
CA381779294 rs1286099537 |
452 | G>A | No |
ClinGen gnomAD |
|
|
rs925602962 CA381779290 |
452 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs925602962 CA224441916 |
452 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA6175280 rs181866073 COSM429814 |
453 | R>C | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA224441917 rs368546416 |
453 | R>H | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 454 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1219354879 CA381779308 |
455 | Y>C | No |
ClinGen gnomAD |
|
|
CA6175281 rs766028610 |
456 | C>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175282 rs766028610 |
456 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1413558655 CA381779341 |
458 | R>K | No |
ClinGen gnomAD |
|
|
COSM1704366 rs1331560649 CA381779343 |
458 | R>S | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1401869716 CA381779345 |
459 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1241147600 CA381779349 |
459 | T>I | No |
ClinGen TOPMed |
|
|
rs762796519 CA6175304 |
460 | I>S | No |
ClinGen ExAC gnomAD |
|
|
rs372774100 CA6175305 |
461 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA224442157 rs372774100 |
461 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175306 rs534527439 |
461 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA381779357 rs534527439 |
461 | N>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs973561429 CA224442179 |
462 | V>A | No |
ClinGen Ensembl |
|
|
rs756350126 CA6175307 |
464 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA381779378 rs1343267547 |
465 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
rs766544041 CA6175308 |
466 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA6175310 COSM931758 rs553100451 |
469 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 473 | D>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748732085 CA6175312 |
473 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1200829123 CA381779444 |
474 | H>R | No |
ClinGen gnomAD |
|
|
rs758954622 CA6175313 |
475 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747341716 CA6175315 |
479 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA381779493 rs1357933242 |
481 | N>S | No |
ClinGen TOPMed |
|
|
rs770712690 CA6175316 |
482 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA381779498 rs1314917004 |
482 | D>H | No |
ClinGen TOPMed |
|
|
rs780840366 CA6175317 |
485 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175319 COSM371703 rs769415235 |
486 | R>Q | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA6175318 rs201308008 |
486 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774830257 CA6175320 |
488 | W>G | No |
ClinGen ExAC gnomAD |
|
|
CA6175321 rs762926402 |
490 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA224442225 rs920799706 |
491 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
CA224442869 rs113430241 |
492 | G>R | No |
ClinGen Ensembl |
|
|
CA224442910 rs780531630 |
494 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748755241 CA6175341 |
494 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1591314891 CA381779609 |
496 | T>P | No |
ClinGen Ensembl |
|
|
CA381779646 rs1468009478 |
500 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA381779649 rs1287936827 |
500 | P>L | No |
ClinGen gnomAD |
|
|
CA6175344 rs761722652 |
504 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA6175343 rs141976065 |
504 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381779691 rs1350004010 |
505 | V>A | No |
ClinGen TOPMed |
|
|
rs1425184217 CA381779701 |
506 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA381779696 rs1591314965 |
506 | T>P | No |
ClinGen Ensembl |
|
|
rs1184850267 CA381779709 |
507 | S>F | No |
ClinGen gnomAD |
|
|
CA224442926 rs919126692 |
509 | S>N | No |
ClinGen Ensembl |
|
|
CA6175348 rs759829275 |
513 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759829275 CA6175347 |
513 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs369740786 CA6175349 |
514 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175350 rs763068827 |
514 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA381779782 rs1591315081 |
516 | H>P | No |
ClinGen Ensembl |
|
|
CA224442973 rs984728756 |
519 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA6175352 rs752180251 |
520 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381779815 rs1409331196 |
520 | C>Y | No |
ClinGen gnomAD |
|
|
rs781655286 CA6175354 |
521 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381779824 rs781655286 |
521 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750703393 CA6175355 |
522 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755820801 CA6175356 |
522 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381779839 rs1255000781 |
523 | D>A | No |
ClinGen TOPMed |
|
|
rs779506320 CA6175357 |
523 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1440345853 CA381779834 |
523 | D>N | No |
ClinGen TOPMed |
|
|
rs748806104 CA6175358 |
524 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1462651677 CA381779855 |
525 | T>I | No |
ClinGen gnomAD |
|
|
rs377044129 CA6175360 |
528 | V>I | No |
ClinGen ESP ExAC TOPMed |
|
|
rs773093966 CA381779894 |
530 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs762421746 CA381779895 COSM3810379 |
530 | D>E | breast [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs773093966 CA6175363 |
530 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs770072481 CA6175365 |
532 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775912740 CA6175366 |
532 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175367 rs775912740 |
532 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA381779907 rs770072481 |
532 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 535 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751853489 COSM3720903 CA6175370 |
537 | R>C | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA6175371 rs762403296 |
537 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751853489 CA381779947 |
537 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750803354 CA6175373 |
538 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs767870522 CA6175372 |
538 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371207895 CA6175396 |
543 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374760952 CA381780015 |
544 | G>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175398 rs374760952 |
544 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175399 rs367875068 |
549 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1409502999 CA381780076 |
551 | W>* | No |
ClinGen gnomAD |
|
|
rs1351612103 CA381780090 |
553 | K>T | No |
ClinGen gnomAD |
|
|
rs1422653145 CA381780103 |
555 | V>A | No |
ClinGen gnomAD |
|
|
CA224443265 rs540213343 |
555 | V>M | No |
ClinGen 1000Genomes |
|
|
CA6175400 rs565192203 |
556 | F>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs369947367 COSM195645 CA6175427 |
558 | P>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA6175428 rs369947367 |
558 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772314744 CA6175430 |
559 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA381780135 rs1565273230 |
559 | D>H | No |
ClinGen Ensembl |
|
|
rs1406895739 CA381780142 |
560 | R>G | No |
ClinGen gnomAD |
|
|
CA6175431 rs777734621 |
562 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1177721007 CA381780158 |
562 | Y>H | No |
ClinGen gnomAD |
|
|
CA224443411 rs767867079 |
565 | A>S | No |
ClinGen Ensembl |
|
|
rs753122202 CA224443447 |
566 | G>A | No |
ClinGen Ensembl |
|
|
rs771442871 CA6175433 |
567 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs199851515 CA6175434 |
568 | C>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA6175436 rs770188001 |
569 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA6175435 rs760032306 |
569 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA381780214 rs1265278938 |
571 | A>V | No |
ClinGen gnomAD |
|
|
rs1426222626 CA381780251 |
576 | D>E | No |
ClinGen TOPMed |
|
|
CA224443474 rs964566520 |
576 | D>G | No |
ClinGen Ensembl |
|
|
rs762539163 CA6175438 |
577 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA381780270 rs1439500219 |
579 | T>N | No |
ClinGen gnomAD |
|
|
CA6175440 rs150243335 |
580 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA6175441 rs138910593 |
581 | K>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA381780276 rs138910593 |
581 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs750448491 CA6175443 |
584 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA381780317 rs1468953485 |
587 | Q>* | No |
ClinGen gnomAD |
|
|
CA6175444 rs756087040 |
589 | P>T | No |
ClinGen ExAC |
|
|
CA6175445 rs766135378 |
590 | H>N | No |
ClinGen ExAC gnomAD |
|
|
rs753591494 CA6175464 |
592 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751991718 CA6175466 |
594 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA6175467 rs751819707 |
595 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1464813343 CA381780387 |
596 | A>D | No |
ClinGen TOPMed |
|
|
CA381780382 rs1217029703 |
596 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA381780388 rs1444911780 |
597 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA381780398 rs1368475479 |
598 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1191865238 CA381780394 |
598 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1368475479 CA381780399 |
598 | A>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 600 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA6175471 rs200865441 |
602 | S>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA6175473 COSM545069 rs142770133 |
603 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1424465986 CA381780434 |
603 | G>V | No |
ClinGen gnomAD |
|
|
rs1289808472 CA381780437 |
604 | S>G | No |
ClinGen gnomAD |
|
|
CA6175474 rs769127298 |
604 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1341098379 CA381780453 |
606 | M>T | No |
ClinGen gnomAD |
|
|
rs774820886 CA6175475 |
606 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771800342 CA6175478 |
609 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA6175477 rs771800342 |
609 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1159876668 CA381780476 |
610 | D>N | No |
ClinGen Ensembl |
|
|
CA381780492 rs1240675372 |
612 | G>S | No |
ClinGen gnomAD |
|
|
CA6175479 rs760194771 |
613 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1484692802 CA381780514 |
615 | V>I | No |
ClinGen gnomAD |
No associated diseases with Q8NAA4
10 regional properties for Q8NAA4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | WD40 repeat | 325 - 365 | IPR001680-1 |
| repeat | WD40 repeat | 369 - 489 | IPR001680-2 |
| repeat | WD40 repeat | 492 - 530 | IPR001680-3 |
| repeat | WD40 repeat | 535 - 619 | IPR001680-4 |
| domain | Autophagy-related protein 16 domain | 17 - 207 | IPR013923 |
| conserved_site | WD40 repeat, conserved site | 351 - 365 | IPR019775-1 |
| conserved_site | WD40 repeat, conserved site | 563 - 577 | IPR019775-2 |
| repeat | G-protein beta WD-40 repeat | 351 - 365 | IPR020472-1 |
| repeat | G-protein beta WD-40 repeat | 437 - 451 | IPR020472-2 |
| repeat | G-protein beta WD-40 repeat | 476 - 490 | IPR020472-3 |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| Atg12-Atg5-Atg16 complex | A protein complex required for the expansion of the autophagosomal membrane. In budding yeast, this complex consists of Atg12p, Atg5p and Atg16p. |
| autophagosome membrane | The lipid bilayer surrounding an autophagosome, a double-membrane-bounded vesicle in which endogenous cellular material is sequestered. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| phagophore assembly site membrane | A cellular membrane associated with the phagophore assembly site. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| autophagosome assembly | The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm. |
| negative stranded viral RNA replication | A viral genome replication process where the template genome is negative stranded, single stranded RNA ((-)ssRNA). |
| protein lipidation | The covalent attachment of lipid groups to an amino acid in a protein. |
| protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q676U5 | ATG16L1 | Autophagy-related protein 16-1 | Homo sapiens (Human) | PR |
| Q8C0J2 | Atg16l1 | Autophagy-related protein 16-1 | Mus musculus (Mouse) | PR |
| Q6KAU8 | Atg16l2 | Protein Atg16l2 | Mus musculus (Mouse) | PR |
| Q09406 | atg-16.2 | Autophagic-related protein 16.2 | Caenorhabditis elegans | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAGPGVPGAP | AARWKRHIVR | QLRLRDRTQK | ALFLELVPAY | NHLLEKAELL | DKFSKKLQPE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PNSVTPTTHQ | GPWEESELDS | DQVPSLVALR | VKWQEEEEGL | RLVCGEMAYQ | VVEKGAALGT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LESELQQRQS | RLAALEARVA | QLREARAQQA | QQVEEWRAQN | AVQRAAYEAL | RAHVGLREAA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LRRLQEEARD | LLERLVQRKA | RAAAERNLRN | ERRERAKQAR | VSQELKKAAK | RTVSISEGPD |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TLGDGMRERR | ETLALAPEPE | PLEKEACEKW | KRPFRSASAT | SLTLSHCVDV | VKGLLDFKKR |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RGHSIGGAPE | QRYQIIPVCV | AARLPTRAQD | VLDAHLSEVN | AVRFGPNSSL | LATGGADRLI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| HLWNVVGSRL | EANQTLEGAG | GSITSVDFDP | SGYQVLAATY | NQAAQLWKVG | EAQSKETLSG |
| 430 | 440 | 450 | 460 | 470 | 480 |
| HKDKVTAAKF | KLTRHQAVTG | SRDRTVKEWD | LGRAYCSRTI | NVLSYCNDVV | CGDHIIISGH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| NDQKIRFWDS | RGPHCTQVIP | VQGRVTSLSL | SHDQLHLLSC | SRDNTLKVID | LRVSNIRQVF |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RADGFKCGSD | WTKAVFSPDR | SYALAGSCDG | ALYIWDVDTG | KLESRLQGPH | CAAVNAVAWC |
| 610 | |||||
| YSGSHMVSVD | QGRKVVLWQ |