Q84WP6
Gene name |
NAC043 (EMB2301, NST1, At2g46770, F19D11.5) |
Protein name |
NAC domain-containing protein 43 |
Names |
ANAC043, Protein EMBRYO DEFECTIVE 2301, Protein NAC SECONDARY WALL THICKENING PROMOTING FACTOR 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT2G46770 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q84WP6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q84WP6-F1 | Predicted | AlphaFoldDB |
15 variants for Q84WP6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_2_19222686_T_G | 46 | D>A | No | 1000Genomes | |
| tmp_2_19222064_A_C | 150 | S>A | No | 1000Genomes | |
| tmp_2_19222056_C_G | 152 | E>D | No | 1000Genomes | |
| ENSVATH14622360 | 156 | V>I | No | 1000Genomes | |
| ENSVATH13661135 | 167 | S>L | No | 1000Genomes | |
| tmp_2_19221512_T_A | 168 | Q>L | No | 1000Genomes | |
| tmp_2_19221458_G_T | 186 | T>N | No | 1000Genomes | |
| tmp_2_19221398_G_A | 206 | T>I | No | 1000Genomes | |
| ENSVATH14622356 | 235 | P>H | No | 1000Genomes | |
| ENSVATH13661134 | 241 | N>D | No | 1000Genomes | |
| tmp_2_19221222_G_C | 265 | H>D | No | 1000Genomes | |
| tmp_2_19221102_C_T | 305 | V>M | No | 1000Genomes | |
| tmp_2_19221044_C_T | 324 | R>Q | No | 1000Genomes | |
| tmp_2_19221013_C_G | 334 | Q>H | No | 1000Genomes | |
| ENSVATH05731139 | 365 | G>V | No | 1000Genomes |
No associated diseases with Q84WP6
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| DNA-binding transcription factor activity | A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| fruit dehiscence | The process leading to the spontaneous opening of the fruit permitting the escape of seeds. |
| plant-type secondary cell wall biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
5 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9M274 | NAC066 | NAC domain-containing protein 66 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9C878 | BRN1 | Protein BEARSKIN1 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FWX2 | NAC007 | NAC domain-containing protein 7 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q5PP28 | NAC003 | NAC domain-containing protein 3 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| F4JN35 | NTL9 | Protein NTM1-like 9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MMSKSMSISV | NGQSQVPPGF | RFHPTEEELL | QYYLRKKVNS | IEIDLDVIRD | VDLNKLEPWD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IQEMCKIGTT | PQNDWYFFSH | KDKKYPTGTR | TNRATAAGFW | KATGRDKIIY | SNGRRIGMRK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TLVFYKGRAP | HGQKSDWIMH | EYRLDDNIIS | PEDVTVHEVV | SIIGEASQDE | GWVVCRIFKK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KNLHKTLNSP | VGGASLSGGG | DTPKTTSSQI | FNEDTLDQFL | ELMGRSCKEE | LNLDPFMKLP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NLESPNSQAI | NNCHVSSPDT | NHNIHVSNVV | DTSFVTSWAA | LDRLVASQLN | GPTSYSITAV |
| 310 | 320 | 330 | 340 | 350 | 360 |
| NESHVGHDHL | ALPSVRSPYP | SLNRSASYHA | GLTQEYTPEM | ELWNTTTSSL | SSSPGPFCHV |
| SNGSG |