Q5TAQ9
Gene name |
DCAF8 (H326, WDR42A) |
Protein name |
DDB1- and CUL4-associated factor 8 |
Names |
WD repeat-containing protein 42A |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:50717 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q5TAQ9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 3I8E | X-ray | 340 A | C/D | 153-165 | PDB |
| AF-Q5TAQ9-F1 | Predicted | AlphaFoldDB |
328 variants for Q5TAQ9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA1196973 RCV002550661 COSM898241 RCV000994149 rs200043571 |
117 | R>C | endometrium Inborn genetic diseases [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA343231582 RCV001195846 rs1228444617 |
151 | R>C | Giant axonal neuropathy 2 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
CA156437 VAR_071265 RCV000119848 rs587777425 |
317 | R>C | Giant axonal neuropathy 2 GAN2; interaction with DDB1 is decreased [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
CA343237893 rs1157383925 |
3 | S>R | No |
ClinGen gnomAD |
|
|
rs1415727667 CA343237833 |
4 | K>N | No |
ClinGen TOPMed |
|
|
rs1473967773 CA343237849 |
4 | K>R | No |
ClinGen gnomAD |
|
|
CA343237828 CA343237827 rs1258601539 |
5 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1197030 rs747279847 |
9 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778633124 CA1197029 |
10 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs756929378 CA343237578 |
11 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs756929378 CA1197028 |
11 | R>T | No |
ClinGen ExAC gnomAD |
|
|
CA343237461 rs1401222075 |
15 | A>G | No |
ClinGen TOPMed |
|
|
rs1319784298 CA343235330 |
18 | S>N | No |
ClinGen gnomAD |
|
|
CA1197012 rs775777406 |
24 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs772461840 CA1197011 |
25 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA343235107 rs1443219783 |
26 | M>T | No |
ClinGen gnomAD |
|
|
CA1197009 rs748935643 |
29 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA31503393 rs994999239 |
29 | A>V | No |
ClinGen TOPMed |
|
|
CA343234907 rs1460169855 |
32 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 33 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1197008 rs777366581 |
34 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA343234835 rs1171585767 |
35 | T>I | No |
ClinGen gnomAD |
|
|
rs868580381 CA31503387 |
36 | S>A | No |
ClinGen Ensembl |
|
|
rs1192369218 CA343234780 |
37 | S>L | No |
ClinGen gnomAD |
|
| TCGA novel | 39 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA31503384 rs1014610787 |
39 | I>T | No |
ClinGen Ensembl |
|
|
CA1197006 rs201056171 |
40 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343234695 rs1252263555 |
41 | V>L | No |
ClinGen gnomAD |
|
|
CA343234668 rs1459054370 |
42 | E>D | No |
ClinGen gnomAD |
|
|
CA1197004 rs754933953 |
43 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1168255767 CA343234629 |
45 | D>N | No |
ClinGen TOPMed |
|
|
rs1372136970 CA343234577 |
47 | S>R | No |
ClinGen TOPMed |
|
|
CA343234567 rs1203569092 |
48 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA16042299 rs1057518253 RCV000413871 |
51 | T>I | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA31503376 rs749916823 |
53 | D>G | No |
ClinGen Ensembl |
|
|
CA343234350 rs1307082554 |
56 | G>D | No |
ClinGen gnomAD |
|
|
CA1197003 rs201644816 |
58 | N>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA343234311 COSM1203077 rs201644816 |
58 | N>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs147997856 COSM424318 CA1197001 |
59 | R>C | breast [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs569565411 CA1197000 |
59 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs569565411 CA343234289 |
59 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1300302190 CA343234265 |
61 | S>N | No |
ClinGen TOPMed |
|
|
rs1228735064 CA343234274 |
61 | S>R | No |
ClinGen TOPMed |
|
|
CA1196999 rs765505834 |
65 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1196998 rs761989923 |
65 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA343234158 rs1461808938 |
67 | T>A | No |
ClinGen gnomAD |
|
|
CA343234131 rs1198899762 |
68 | D>N | No |
ClinGen gnomAD |
|
|
rs780857370 CA31503367 |
69 | T>I | No |
ClinGen gnomAD |
|
|
CA343234083 rs780857370 |
69 | T>R | No |
ClinGen gnomAD |
|
|
CA343234009 rs1434777731 |
72 | S>L | No |
ClinGen gnomAD |
|
|
rs1208295999 COSM1317642 CA343234017 |
72 | S>P | Variant assessed as Somatic; impact. haematopoietic_and_lymphoid_tissue [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA1196997 rs754038372 |
73 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 77 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343233785 rs1319327817 |
79 | D>E | No |
ClinGen gnomAD |
|
|
CA31503363 rs756910442 |
79 | D>G | No |
ClinGen Ensembl |
|
|
CA343233821 rs1441398459 |
79 | D>N | No |
ClinGen gnomAD |
|
|
CA1196994 rs555946382 |
81 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA343233721 rs1479571934 |
82 | E>K | No |
ClinGen gnomAD |
|
|
rs776038139 CA1196993 |
83 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA343233313 rs1557836377 |
93 | N>S | No |
ClinGen Ensembl |
|
|
CA343233294 rs1213347937 |
94 | R>G | No |
ClinGen gnomAD |
|
|
rs371810218 CA1196992 |
94 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772868623 CA1196990 |
95 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA1196989 rs191317846 |
96 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA1196988 rs747789970 |
97 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343233144 rs747789970 |
97 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1196987 rs780736325 |
98 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343233101 rs780736325 |
98 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs368652723 CA343233096 |
98 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA1196986 rs368652723 |
98 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1315214708 CA343233079 |
99 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs751240226 CA31503348 |
102 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751240226 CA1196985 |
102 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779999241 CA1196984 |
103 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA343232921 rs1467692735 |
103 | E>K | No |
ClinGen TOPMed |
|
|
rs1171139063 CA343232851 |
104 | E>D | No |
ClinGen gnomAD |
|
|
rs1383271727 CA343232803 |
106 | E>K | No |
ClinGen TOPMed |
|
|
CA31503342 rs144631187 |
109 | E>Q | No |
ClinGen Ensembl |
|
|
rs199748027 RCV000954584 |
109 | E>missing | No |
ClinVar dbSNP |
|
|
rs750184781 CA343232524 |
115 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1196975 rs750184781 |
115 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs377306445 CA1196976 |
115 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs762773509 CA1196974 |
116 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA31503332 rs376611740 |
116 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs146600574 CA1196972 |
117 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs936764516 CA31503320 |
119 | Q>H | No |
ClinGen Ensembl |
|
|
CA1196971 rs764122154 |
119 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA1196970 rs199677055 |
120 | R>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1315692521 CA343232401 COSM3802475 |
120 | R>H | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs774760051 CA1196966 |
122 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1196967 rs774760051 |
122 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768015097 CA1196968 |
122 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1310764783 CA343232325 |
123 | A>T | No |
ClinGen gnomAD |
|
|
rs890486134 CA31503313 |
124 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA1196964 rs186360966 |
125 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs186360966 CA1196965 |
125 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs146888991 CA1196963 |
125 | R>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs768081133 CA1196962 |
130 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1196960 rs141055794 |
131 | D>E | No |
ClinGen ESP ExAC TOPMed |
|
|
CA1196961 rs746477428 |
131 | D>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 133 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772114617 CA1196958 |
134 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745787256 CA1196957 |
135 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA31503301 rs765171601 |
137 | E>G | No |
ClinGen Ensembl |
|
|
CA31503298 rs370374204 |
138 | D>G | No |
ClinGen ESP |
|
|
rs199572155 CA1196954 |
140 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA1196955 rs757088084 |
140 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1196952 rs756165555 |
141 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA343231786 rs1334652694 |
142 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs752759630 CA1196951 |
148 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343231628 rs1174255264 |
149 | R>* | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 149 | R>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343231630 rs1174255264 |
149 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs755532127 CA1196949 |
149 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA343231369 rs1396581764 |
156 | P>L | No |
ClinGen gnomAD |
|
|
rs1326574978 CA343231301 |
159 | R>W | No |
ClinGen gnomAD |
|
|
CA343231221 rs1269993925 |
161 | R>Q | No |
ClinGen TOPMed |
|
|
rs763263130 CA1196946 |
166 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs539129422 CA31503283 |
167 | A>S | No |
ClinGen Ensembl |
|
|
CA1196945 rs776167874 |
168 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343230948 rs776167874 |
168 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1373868718 CA343230826 |
171 | Y>S | No |
ClinGen gnomAD |
|
|
rs1192540937 CA343230752 |
172 | E>D | No |
ClinGen gnomAD |
|
|
rs1212949058 CA343230707 |
174 | C>S | No |
ClinGen TOPMed |
|
|
CA1196944 rs763743862 |
176 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 176 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343230621 rs1247073753 |
177 | R>T | No |
ClinGen TOPMed |
|
|
CA1196941 COSM107366 rs141233812 |
184 | R>C | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA1196940 COSM3376803 rs770987180 |
184 | R>H | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs373676811 CA1196939 |
187 | H>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs770874428 CA1196938 |
187 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA343230112 rs1303532877 |
191 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA343230058 rs1368700121 |
192 | H>Y | No |
ClinGen gnomAD |
|
|
CA1196935 rs201559324 |
193 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1196934 rs201559324 |
193 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1571097455 CA343229895 |
198 | T>P | No |
ClinGen Ensembl |
|
|
rs781377478 CA343229867 |
199 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755017154 CA1196932 |
204 | R>C | No |
ClinGen ExAC gnomAD |
|
|
COSM1639577 rs752089736 CA1196931 |
204 | R>H | stomach [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs750731679 CA1196928 |
207 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA1196925 rs752262535 |
210 | S>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 211 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375267419 CA1196924 |
212 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA343229465 rs1281259086 |
213 | D>N | No |
ClinGen gnomAD |
|
|
CA31503249 rs1027406725 |
214 | D>A | No |
ClinGen Ensembl |
|
|
CA343229341 rs1571097365 |
217 | V>G | No |
ClinGen Ensembl |
|
|
CA343229359 rs1280332940 |
217 | V>M | No |
ClinGen gnomAD |
|
|
rs1571097358 CA343229325 |
218 | V>G | No |
ClinGen Ensembl |
|
|
rs769450532 CA1196919 |
223 | V>A | No |
ClinGen ExAC |
|
|
rs769450532 CA1196918 |
223 | V>G | No |
ClinGen ExAC |
|
|
CA1196920 rs762984690 |
223 | V>L | No |
ClinGen ExAC |
|
|
CA31503238 rs71628169 |
224 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM3705160 CA1196916 rs71628169 |
224 | R>Q | liver [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 224 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343229121 rs964936301 |
225 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA31503234 rs964936301 |
225 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs564633806 CA343229124 |
225 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA343229102 rs1408192321 |
226 | Q>* | No |
ClinGen gnomAD |
|
|
rs868661735 CA31503232 |
227 | P>S | No |
ClinGen TOPMed |
|
|
rs758971324 CA343228986 CA1196912 |
230 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 236 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1196911 rs750873162 |
237 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343228502 rs1423682008 |
241 | Q>H | No |
ClinGen gnomAD |
|
|
CA343225434 rs1468877825 |
243 | K>T | No |
ClinGen gnomAD |
|
|
CA1196869 rs756512100 |
248 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA1196868 rs746687484 |
249 | G>C | No |
ClinGen ExAC |
|
|
CA31502978 rs577012239 |
252 | T>A | No |
ClinGen 1000Genomes |
|
|
CA31502974 rs997289511 |
255 | M>T | No |
ClinGen Ensembl |
|
|
rs749834716 CA1196865 |
260 | G>W | No |
ClinGen ExAC |
|
|
rs1557835383 CA343224816 |
263 | R>Q | No |
ClinGen Ensembl |
|
|
rs940261478 CA31502966 |
264 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1443698978 CA343224792 |
265 | A>T | No |
ClinGen gnomAD |
|
|
CA343224706 rs1557835361 |
267 | L>P | No |
ClinGen Ensembl |
|
|
CA343224645 rs1293247988 |
269 | A>S | No |
ClinGen gnomAD |
|
|
RCV001223235 CA1196862 rs753753498 |
270 | T>I | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1355919026 CA343224606 |
271 | Q>* | No |
ClinGen gnomAD |
|
|
rs763907889 CA1196861 |
271 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs760414495 CA1196860 |
272 | C>R | No |
ClinGen ExAC gnomAD |
|
|
CA31502959 rs1045948788 |
275 | N>D | No |
ClinGen gnomAD |
|
|
CA343224280 rs1454615161 |
278 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1189242852 CA343224156 |
282 | H>D | No |
ClinGen gnomAD |
|
|
rs1481515395 CA343224142 |
282 | H>L | No |
ClinGen gnomAD |
|
|
CA343224073 rs1205424160 |
285 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA343223022 rs1228226674 |
290 | A>P | No |
ClinGen gnomAD |
|
|
rs1327584779 CA343222934 |
293 | P>S | No |
ClinGen TOPMed |
|
|
CA1196844 rs753796531 |
294 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA343222836 rs1414841039 |
295 | S>F | No |
ClinGen gnomAD |
|
|
CA31502624 rs774531050 |
298 | T>M | No |
ClinGen gnomAD |
|
|
rs374705027 CA343222409 |
307 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374705027 CA1196842 |
307 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1471527503 CA343222341 |
310 | T>S | No |
ClinGen gnomAD |
|
|
rs1424639357 CA343222228 |
315 | Q>K | No |
ClinGen gnomAD |
|
|
CA31502613 COSM2085416 rs954409145 |
317 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA343222142 rs954409145 |
317 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA343222161 rs587777425 |
317 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1261892205 CA343222123 |
318 | P>Q | No |
ClinGen gnomAD |
|
|
CA343222106 rs1431324556 COSM898234 |
319 | A>V | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA343222081 rs1327588458 |
320 | S>L | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 324 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343280032 rs1386064868 |
331 | K>N | No |
ClinGen gnomAD |
|
|
rs1571087644 CA343280008 |
332 | V>G | No |
ClinGen Ensembl |
|
| TCGA novel | 335 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343279932 rs1477780092 |
336 | T>A | No |
ClinGen gnomAD |
|
|
rs945161039 CA31517062 |
336 | T>M | No |
ClinGen TOPMed |
|
|
rs750599788 CA1196816 |
338 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA343279823 rs1397492263 |
340 | N>T | No |
ClinGen gnomAD |
|
|
rs200843224 RCV000994148 CA1196814 |
343 | N>S | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
CA1196813 rs777165555 |
344 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA343279701 rs1197133927 |
344 | T>S | No |
ClinGen gnomAD |
|
|
CA343279680 rs1191060362 |
345 | H>P | No |
ClinGen TOPMed |
|
|
CA31517045 rs867007346 |
345 | H>Y | No |
ClinGen Ensembl |
|
|
rs1273200013 CA343279644 |
346 | Q>H | No |
ClinGen gnomAD |
|
|
CA31517042 rs778731754 |
348 | A>V | No |
ClinGen Ensembl |
|
|
CA1196811 rs145344286 |
351 | G>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 352 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1196810 rs773878796 |
352 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748922820 CA1196808 |
353 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA1196809 rs770635527 |
353 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA343278183 rs1260336647 |
357 | R>S | No |
ClinGen TOPMed |
|
| TCGA novel | 362 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343278109 rs1237486327 |
367 | N>S | No |
ClinGen gnomAD |
|
|
CA1196785 rs150468383 |
370 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs150468383 CA343278089 |
370 | N>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746909756 CA1196784 |
370 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 372 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs966854611 CA31514916 |
377 | C>Y | No |
ClinGen TOPMed |
|
|
CA343278022 rs1209085927 |
379 | H>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 379 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343277950 rs1290945285 |
388 | A>P | No |
ClinGen gnomAD |
|
|
CA31514617 rs752625360 |
394 | V>G | No |
ClinGen Ensembl |
|
|
rs1173427133 CA343277823 |
398 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1433775893 CA343277666 |
403 | L>R | No |
ClinGen gnomAD |
|
|
rs1233001412 CA343277636 |
405 | S>T | No |
ClinGen TOPMed |
|
| TCGA novel | 409 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775573215 CA1196745 |
415 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA343277504 rs1428623735 |
415 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
CA343277505 rs1428623735 |
415 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA1196744 rs772202619 |
416 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs772202619 CA343277498 |
416 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
rs774334380 CA1196742 |
417 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs376443695 CA1196741 |
419 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs376443695 CA1196740 |
419 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1477155036 CA343277466 |
419 | S>R | No |
ClinGen gnomAD |
|
|
CA343277479 rs1424122101 |
419 | S>R | No |
ClinGen gnomAD |
|
|
rs1254321560 CA343277463 |
420 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 422 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343277416 rs1571081637 |
423 | Q>P | No |
ClinGen Ensembl |
|
|
CA1196737 rs748162409 |
425 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1212813308 CA343277197 |
436 | T>R | No |
ClinGen gnomAD |
|
|
rs762593998 CA1196723 COSM1203081 |
440 | V>I | large_intestine prostate [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1557829287 CA343276070 |
441 | N>S | No |
ClinGen Ensembl |
|
| TCGA novel | 448 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 455 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200095819 CA31513650 |
456 | C>R | No |
ClinGen 1000Genomes |
|
|
rs1557829267 CA343275810 |
459 | I>V | No |
ClinGen Ensembl |
|
|
CA1196717 rs142684645 |
461 | L>F | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1196716 rs780377544 |
465 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA343275670 rs1248969551 |
469 | I>M | No |
ClinGen gnomAD |
|
|
rs144537625 CA1196713 |
470 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs956730220 CA31513609 |
475 | G>R | No |
ClinGen Ensembl |
|
|
CA343275580 rs1557829230 |
476 | D>N | No |
ClinGen Ensembl |
|
|
rs755879191 CA1196712 |
477 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244854061 CA343275531 |
479 | G>V | No |
ClinGen gnomAD |
|
|
COSM530121 CA1196710 rs767163915 |
480 | V>M | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA343274416 rs1407064278 |
481 | V>I | No |
ClinGen TOPMed |
|
|
rs751100608 CA1196690 |
483 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA343274339 rs1571077108 |
485 | E>D | No |
ClinGen Ensembl |
|
|
CA343274316 rs1571077105 |
487 | H>P | No |
ClinGen Ensembl |
|
|
CA343274286 rs1571077100 |
489 | H>P | No |
ClinGen Ensembl |
|
|
CA343274280 rs1432223845 |
489 | H>Q | No |
ClinGen gnomAD |
|
|
CA1196687 rs750346765 |
492 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343274192 rs1193968171 |
500 | H>R | No |
ClinGen gnomAD |
|
|
rs1347043896 CA343274129 |
504 | I>V | No |
ClinGen gnomAD |
|
|
CA343274110 rs1571077054 |
505 | W>G | No |
ClinGen Ensembl |
|
|
rs1293047455 CA343274073 |
507 | P>H | No |
ClinGen TOPMed |
|
|
rs1330708266 CA343274039 |
510 | E>V | No |
ClinGen gnomAD |
|
|
CA1196682 rs760937270 |
516 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1194383875 CA343273983 |
519 | K>T | No |
ClinGen TOPMed |
|
|
CA343273979 rs1411924175 |
520 | D>N | No |
ClinGen gnomAD |
|
|
CA1196661 rs759600036 |
522 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA1196658 rs771628518 |
527 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA31511461 rs910347725 |
527 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs763536921 CA1196657 |
528 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1196656 rs773765844 |
531 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1283877248 CA343273857 |
535 | H>Q | No |
ClinGen gnomAD |
|
|
CA1196655 rs770166441 |
535 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343273854 rs1218576549 |
536 | Q>E | No |
ClinGen TOPMed |
|
|
CA1196653 rs779709016 |
539 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA343273799 rs1480267923 |
543 | H>Q | No |
ClinGen TOPMed |
|
|
CA343273780 rs1427450429 |
546 | W>* | No |
ClinGen TOPMed |
|
|
CA343273747 rs1417418042 |
550 | H>R | No |
ClinGen TOPMed |
|
|
CA343273736 rs1051698705 |
551 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA343273717 rs1322958642 |
554 | Q>H | No |
ClinGen gnomAD |
|
|
CA1196651 rs745317914 |
556 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs778391071 CA1196650 |
556 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA343273702 rs1315722812 |
557 | H>Y | No |
ClinGen gnomAD |
|
|
rs142007100 CA1196649 |
559 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs201359662 CA31511406 |
559 | R>W | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 560 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1196634 rs745507749 |
560 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA1196635 rs371987013 |
560 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1196633 rs553804996 |
562 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770386145 CA1196632 |
565 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1206409880 CA343273632 |
567 | G>R | No |
ClinGen gnomAD |
|
|
rs777706494 CA1196630 |
571 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs61741888 CA31511073 |
571 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs61741888 CA31511076 |
571 | A>T | No |
ClinGen TOPMed |
|
|
rs777706494 CA343273571 |
571 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1030419444 CA31511064 |
574 | D>H | No |
ClinGen TOPMed |
|
|
CA1196628 rs748037344 |
576 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1369107303 CA343273494 |
577 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1571075924 CA343273487 |
577 | P>L | No |
ClinGen Ensembl |
|
| TCGA novel | 578 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA343273468 rs1356679712 |
578 | S>R | No |
ClinGen TOPMed |
|
|
rs997384662 CA31511063 |
578 | S>T | No |
ClinGen TOPMed |
|
|
CA343273450 rs1402743124 |
579 | S>C | No |
ClinGen gnomAD |
|
|
CA343273465 rs1282298579 |
579 | S>T | No |
ClinGen gnomAD |
|
|
CA343273395 rs1461372344 |
581 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA343273414 rs1308114906 |
581 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA31511046 rs867856057 |
583 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA343273328 rs1424227537 |
585 | E>K | No |
ClinGen gnomAD |
|
|
CA343273250 rs1442666895 |
588 | G>S | No |
ClinGen TOPMed |
|
|
CA343273234 rs1163871338 |
588 | G>V | No |
ClinGen TOPMed |
|
|
rs766602529 CA343273176 |
591 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766602529 CA1196624 |
591 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA343273184 rs1479579563 |
591 | R>W | No |
ClinGen gnomAD |
|
|
CA343273110 rs1466236366 |
595 | M>L | No |
ClinGen TOPMed |
|
| TCGA novel | 596 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
1 associated diseases with Q5TAQ9
[MIM: 610100]: Giant axonal neuropathy 2, autosomal dominant (GAN2)
An autosomal dominant peripheral axonal neuropathy characterized by onset of distal sensory impairment with lower extremity muscle weakness and atrophy after the second decade. Clinical features include foot deformities apparent in childhood, and cardiomyopathy in severely affected individuals. Sural nerve biopsy shows giant axonal swelling with neurofilament accumulation. {ECO:0000269|PubMed:24500646}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- An autosomal dominant peripheral axonal neuropathy characterized by onset of distal sensory impairment with lower extremity muscle weakness and atrophy after the second decade. Clinical features include foot deformities apparent in childhood, and cardiomyopathy in severely affected individuals. Sural nerve biopsy shows giant axonal swelling with neurofilament accumulation. {ECO:0000269|PubMed:24500646}. Note=The disease is caused by variants affecting the gene represented in this entry.
7 regional properties for Q5TAQ9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| repeat | WD40 repeat | 182 - 221 | IPR001680-1 |
| repeat | WD40 repeat | 224 - 266 | IPR001680-2 |
| repeat | WD40 repeat | 270 - 312 | IPR001680-3 |
| repeat | WD40 repeat | 320 - 360 | IPR001680-4 |
| repeat | WD40 repeat | 375 - 415 | IPR001680-5 |
| repeat | WD40 repeat | 421 - 463 | IPR001680-6 |
| repeat | WD40 repeat | 466 - 506 | IPR001680-7 |
Functions
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| Cul4-RING E3 ubiquitin ligase complex | A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q58WW2 | DCAF6 | DDB1- and CUL4-associated factor 6 | Homo sapiens (Human) | PR |
| A6NGE4 | DCAF8L1 | DDB1- and CUL4-associated factor 8-like protein 1 | Homo sapiens (Human) | PR |
| P0C7V8 | DCAF8L2 | DDB1- and CUL4-associated factor 8-like protein 2 | Homo sapiens (Human) | PR |
| Q9DC22 | Dcaf6 | DDB1- and CUL4-associated factor 6 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSSKGSSTDG | RTDLANGSLS | SSPEEMSGAE | EGRETSSGIE | VEASDLSLSL | TGDDGGPNRT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| STESRGTDTE | SSGEDKDSDS | MEDTGHYSIN | DENRVHDRSE | EEEEEEEEEE | EEQPRRRVQR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KRANRDQDSS | DDERALEDWV | SSETSALPRP | RWQALPALRE | RELGSSARFV | YEACGARVFV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QRFRLQHGLE | GHTGCVNTLH | FNQRGTWLAS | GSDDLKVVVW | DWVRRQPVLD | FESGHKSNVF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QAKFLPNSGD | STLAMCARDG | QVRVAELSAT | QCCKNTKRVA | QHKGASHKLA | LEPDSPCTFL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SAGEDAVVFT | IDLRQDRPAS | KLVVTKEKEK | KVGLYTIYVN | PANTHQFAVG | GRDQFVRIYD |
| 370 | 380 | 390 | 400 | 410 | 420 |
| QRKIDENENN | GVLKKFCPHH | LVNSESKANI | TCLVYSHDGT | ELLASYNDED | IYLFNSSHSD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| GAQYVKRYKG | HRNNATVKGV | NFYGPKSEFV | VSGSDCGHIF | LWEKSSCQII | QFMEGDKGGV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VNCLEPHPHL | PVLATSGLDH | DVKIWAPTAE | ASTELTGLKD | VIKKNKRERD | EDSLHQTDLF |
| 550 | 560 | 570 | 580 | 590 | |
| DSHMLWFLMH | HLRQRRHHRR | WREPGVGATD | ADSDESPSSS | DTSDEEEGPD | RVQCMPS |