Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for Q5M7N9

Entry ID Method Resolution Chain Position Source
AF-Q5M7N9-F1 Predicted AlphaFoldDB

No variants for Q5M7N9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q5M7N9

2 associated diseases with Q5M7N9

[MIM: 609033]: Posterior column ataxia with retinitis pigmentosa (PCARP)

A neurodegenerative syndrome beginning in infancy with areflexia and retinitis pigmentosa. Nyctalopia (night blindness) and peripheral visual field loss are usually evident during late childhood or teenage years, with subsequent progressive constriction of the visual fields and loss of central retinal function over time. A sensory ataxia caused by degeneration of the posterior columns of the spinal cord results in a loss of proprioceptive sensation that is clinically evident in the second decade of life and gradually progresses. Scoliosis, camptodactyly, achalasia, gastrointestinal dysmotility, and a sensory peripheral neuropathy are variable features of the disease. Affected individuals have no clinical or radiological evidence of cerebral or cerebellar involvement. {ECO:0000269|PubMed:21070897, ECO:0000269|PubMed:21267618}. Note=The disease is caused by variants affecting the gene represented in this entry. Defective neuronal heme transmembrane export due to FLVCR1 mutations may abrogate the neuroprotective effects of neuroglobin and initiate an apoptotic cascade that results in the selective degeneration of photoreceptors in the neurosensory retina and sensory neurons in the posterior spinal cord.

Without disease ID
  • A neurodegenerative syndrome beginning in infancy with areflexia and retinitis pigmentosa. Nyctalopia (night blindness) and peripheral visual field loss are usually evident during late childhood or teenage years, with subsequent progressive constriction of the visual fields and loss of central retinal function over time. A sensory ataxia caused by degeneration of the posterior columns of the spinal cord results in a loss of proprioceptive sensation that is clinically evident in the second decade of life and gradually progresses. Scoliosis, camptodactyly, achalasia, gastrointestinal dysmotility, and a sensory peripheral neuropathy are variable features of the disease. Affected individuals have no clinical or radiological evidence of cerebral or cerebellar involvement. {ECO:0000269|PubMed:21070897, ECO:0000269|PubMed:21267618}. Note=The disease is caused by variants affecting the gene represented in this entry. Defective neuronal heme transmembrane export due to FLVCR1 mutations may abrogate the neuroprotective effects of neuroglobin and initiate an apoptotic cascade that results in the selective degeneration of photoreceptors in the neurosensory retina and sensory neurons in the posterior spinal cord.

1 regional properties for Q5M7N9

Type Name Position InterPro Accession
domain F-box domain 555 - 592 IPR001810

Functions

Description
EC Number
Subcellular Localization
  • Cell membrane ; Peripheral membrane protein
  • Endoplasmic reticulum membrane ; Multi-pass membrane protein
  • Localizes to endoplasmic reticulum-plasma membrane contact sites (EPCS)
  • Recruited to the cell membrane via the third C2 domain (By similarity)
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

4 GO annotations of cellular component

Name Definition
endoplasmic reticulum-plasma membrane contact site A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes.
extrinsic component of cytoplasmic side of plasma membrane The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.
integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
intrinsic component of endoplasmic reticulum membrane The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.

5 GO annotations of molecular function

Name Definition
calcium ion binding Binding to a calcium ion (Ca2+).
calcium-dependent phospholipid binding Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
phosphatidylcholine binding Binding to a phosphatidylcholine, a glycophospholipid in which a phosphatidyl group is esterified to the hydroxyl group of choline.
phosphatidylethanolamine binding Binding to a phosphatidylethanolamine, a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.
phosphatidylinositol binding Binding to an inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.

2 GO annotations of biological process

Name Definition
endoplasmic reticulum-plasma membrane tethering The attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers.
lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

4 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q9SKR2 SYT1 Synaptotagmin-1 Arabidopsis thaliana (Mouse-ear cress) PR
Q7XA06 SYT3 Synaptotagmin-3 Arabidopsis thaliana (Mouse-ear cress) PR
B6ETT4 SYT2 Synaptotagmin-2 Arabidopsis thaliana (Mouse-ear cress) PR
A0JJX5 SYT4 Synaptotagmin-4 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MAQGDPGGQT PQAPQGTDKK PDEPKATEKP QGAGPQPRDP PGGEKGLRDP PGGEKGPRDP
70 80 90 100 110 120
GQGGAGEALA EALYGLGRPV LRAVLYLFPV YLCGRFGLSP TWLLFGLFLW MFWTRNKKFK
130 140 150 160 170 180
LARIQAAWDL HENEKLGVTR GLYLQQLPAW VNFPDVERVE WLNKVVGQMW PYIGMYVEKM
190 200 210 220 230 240
FQDKVEPLVR SSSAHLKAFT FTKVHLGEKF PRINGVKSYT KNVDKREVIL DLQLSYNGDV
250 260 270 280 290 300
EINVEVKKMC KAGVKGVQLH GTLRVILAPL LPDLPFVGAV TMFFIQRPHL DINWTGLTNV
310 320 330 340 350 360
LEIPGVSDFS DSMIVDMIAS HLVLPNRFTV PLSSQVQAAQ LRFPLPHGVL RLHLIEAEDL
370 380 390 400 410 420
IPKDNYLKGI IRGKSDPYAV LRIGNQNFKS RTIKENLNPK WGEMYEFVVH EVPGQDLEVD
430 440 450 460 470 480
LYDEDPDKDD FLGSLVIGLE GVMQDRVVDE WFPLSDVPSG SVHLRLEWLS LLPKSEKLSE
490 500 510 520 530 540
AKGGISTAML IVYLDSASAL PRNHFEYSSS EYTTRKQRHM TYTKTDKDPN SYVLMSVGKK
550 560 570 580 590 600
SVKSKTCTGS TEPVWGQAFA FFIQDVHMQH LHLEVKDSER QCALGMLDLP LHRLLGNEEL
610 620 630 640 650 660
TADQRFPLAN SGPNSTIKMK IVLRVLHVEA PEPESIYTGI NSLKQGPVSI KRAQSQQHKS
670 680 690 700 710 720
HGKSHQAHHQ AHQTQQNHTV QQPKAERKES ISTTSQQANT SSSNPAPNQN PNSTGAVPES
730 740 750 760 770 780
HTPSLKPLER IAPSLLSLNS IGSSVFDPND KRWPSEMTGE VEVSVRYASL RRCLVVLINS
790 800 810 820 830 840
CRNLIQCSSN GADPYVRIYL LPDRKWSGRK KTSVKRKTLN PQYNERFEFL VSQEEAKKRM
850 860 870 880
LDVAVKNNRG FGSHERKELG KVLVDLSCDD LVKGFTKWFE LTPTGLPTS