P43234
Gene name |
CTSO (CTSO1) |
Protein name |
Cathepsin O |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:1519 |
EC number |
3.4.22.42: Cysteine endopeptidases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P43234
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P43234-F1 | Predicted | AlphaFoldDB |
293 variants for P43234
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1158694877 CA358639109 |
2 | D>E | No |
TOPMed gnomAD ClinGen |
|
|
rs1579352693 CA358639098 |
4 | R>L | No |
ClinGen Ensembl |
|
|
CA109025803 rs1012804643 |
5 | A>T | No |
TOPMed ClinGen |
|
|
CA358639082 rs1273261535 |
7 | P>L | No |
ClinGen TOPMed |
|
|
rs1252413661 CA358639078 |
8 | W>* | No |
TOPMed ClinGen |
|
|
rs1252413661 CA358639076 |
8 | W>L | No |
TOPMed ClinGen |
|
|
rs1035928928 CA109025801 |
10 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1366992070 CA358639049 |
12 | L>R | No |
ClinGen TOPMed |
|
|
CA109025800 rs1013059201 |
13 | L>P | No |
ClinGen TOPMed |
|
|
rs1011294433 CA358639017 |
18 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs888748556 CA109025796 |
18 | R>L | No |
ClinGen TOPMed |
|
|
CA358639016 rs1011294433 |
18 | R>W | No |
TOPMed gnomAD ClinGen |
|
|
rs933566988 CA109025794 |
19 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA358639010 rs933566988 |
19 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1050054129 CA358639012 |
19 | G>R | No |
TOPMed ClinGen |
|
|
rs1050054129 CA109025795 |
19 | G>S | No |
ClinGen TOPMed |
|
|
rs1411788463 CA358639009 |
20 | G>S | No |
gnomAD ClinGen |
|
|
rs1420294780 CA358639003 |
21 | G>S | No |
TOPMed gnomAD ClinGen |
|
|
CA358638996 rs1172590057 |
22 | D>H | No |
ClinGen TOPMed |
|
|
CA358638995 rs1172590057 |
22 | D>N | No |
ClinGen TOPMed |
|
|
rs1560793301 CA358638986 |
23 | A>E | No |
ClinGen Ensembl |
|
|
rs1465971811 CA358638979 |
24 | D>G | No |
TOPMed ClinGen |
|
|
rs902128830 CA109025793 |
25 | S>F | No |
TOPMed ClinGen |
|
|
CA358638975 rs1579352581 |
25 | S>T | No |
Ensembl ClinGen |
|
|
CA109025792 rs940896175 |
26 | R>H | No |
TOPMed ClinGen |
|
|
CA109025791 rs938408508 |
27 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA358638962 rs938408508 |
27 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA109025790 rs938408508 |
27 | A>V | No |
TOPMed gnomAD ClinGen |
|
|
CA358638958 rs1336336575 |
28 | P>L | No |
gnomAD ClinGen |
|
|
rs866795763 CA109025788 |
30 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
rs947065360 CA358638938 |
31 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA109025787 rs947065360 |
31 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA358638928 rs1327003630 |
33 | W>* | No |
gnomAD ClinGen |
|
|
CA109025786 rs948124104 |
33 | W>C | No |
TOPMed ClinGen |
|
|
CA358638903 rs1211892854 |
37 | R>G | No |
ClinGen TOPMed |
|
|
rs536466515 CA3119322 |
38 | E>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA358638897 rs1255487636 |
38 | E>K | No |
TOPMed ClinGen |
|
|
rs1262496927 CA358638881 |
40 | E>A | No |
TOPMed ClinGen |
|
|
CA358638877 rs1320153203 |
41 | A>T | No |
gnomAD ClinGen |
|
|
rs986025700 CA109025785 |
42 | A>S | No |
Ensembl ClinGen |
|
|
CA358638867 rs1192236899 |
42 | A>V | No |
TOPMed ClinGen |
|
|
CA3119321 rs758644619 |
43 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA109025784 rs781781958 |
43 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA358638853 rs1472502446 |
45 | R>W | No |
gnomAD ClinGen |
|
|
rs1341434648 CA358638830 |
46 | E>D | No |
ClinGen gnomAD |
|
|
rs770679170 CA3119309 |
46 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1280942533 CA358638827 |
47 | S>G | No |
gnomAD ClinGen |
|
| TCGA novel | 48 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3119308 rs749245476 |
51 | H>R | No |
ExAC gnomAD ClinGen |
|
|
CA109024594 rs559355629 |
52 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
|
rs376990374 CA358638790 |
52 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM177375 rs376990374 CA3119307 |
52 | R>Q | Variant assessed as Somatic; 0.0008321 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs769738268 CA3119306 |
56 | S>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ExAC gnomAD ClinGen NCI-TCGA |
|
rs1370543575 CA358638760 |
57 | L>V | No |
ClinGen gnomAD |
|
|
CA358638728 rs1348112742 |
61 | E>G | No |
TOPMed ClinGen |
|
| TCGA novel | 61 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1049401381 CA109024592 |
62 | N>T | No |
ClinGen Ensembl |
|
|
CA358638706 rs1393590675 |
64 | T>I | No |
gnomAD ClinGen |
|
|
CA3119301 rs114862424 |
65 | A>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3119302 rs114862424 |
65 | A>T | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA358638702 rs1219269229 |
65 | A>V | No |
TOPMed ClinGen |
|
|
CA358638689 rs1164128992 |
67 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA3119300 rs757625874 |
69 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs754231630 CA3119298 |
72 | F>L | No |
ExAC gnomAD ClinGen |
|
|
CA3119297 rs764634611 |
74 | Y>C | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA358638643 rs1258146191 |
74 | Y>H | No |
gnomAD ClinGen |
|
|
rs767176089 CA3119294 |
80 | F>L | No |
ExAC gnomAD ClinGen |
|
|
CA3119295 rs767176089 |
80 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs867988308 CA109024589 |
81 | K>R | No |
Ensembl ClinGen |
|
|
CA358638565 rs1284123703 |
83 | I>T | No |
gnomAD ClinGen |
|
|
rs201064754 CA109024524 |
85 | L>S | No |
ClinGen 1000Genomes |
|
|
rs754379370 CA3119273 |
86 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA358638535 rs1294656597 |
87 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA358638523 rs1318156446 |
89 | P>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
| TCGA novel | 89 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1446343964 CA358638512 |
91 | K>* | No |
TOPMed ClinGen |
|
|
rs1446343964 CA358638513 |
91 | K>E | No |
TOPMed ClinGen |
|
|
CA3119272 rs751093990 |
91 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA109024522 rs1043124628 |
93 | P>A | No |
TOPMed ClinGen |
|
|
CA358638497 rs765900289 |
93 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765900289 CA3119271 |
93 | P>R | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA3119270 CA358638490 rs139102003 |
94 | R>S | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA109024521 rs889114763 |
96 | S>A | No |
ClinGen TOPMed |
|
|
CA109024520 rs915264073 |
97 | A>T | No |
TOPMed gnomAD ClinGen |
|
|
CA358638465 rs1332238930 |
98 | E>D | No |
TOPMed ClinGen |
|
|
CA109024519 rs868759259 |
99 | V>L | No |
ClinGen Ensembl |
|
|
rs772963624 CA3119269 |
100 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747051008 CA358638450 |
101 | M>L | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA3119268 rs747051008 |
101 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA109024518 rs954299183 |
102 | S>F | No |
gnomAD ClinGen |
|
|
rs954299183 CA358638440 |
102 | S>Y | No |
gnomAD ClinGen |
|
|
CA358638434 rs1340399307 |
103 | I>T | No |
TOPMed ClinGen |
|
|
CA358638421 rs1579346102 |
105 | N>S | No |
Ensembl ClinGen |
|
|
rs201104392 CA358638398 |
109 | P>A | No |
gnomAD ClinGen |
|
|
rs369505018 CA3119266 |
109 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA358638397 rs201104392 |
109 | P>S | No |
ClinGen gnomAD |
|
|
rs201104392 CA109024517 |
109 | P>T | No |
gnomAD ClinGen |
|
|
CA358638388 rs1403257470 |
110 | L>F | No |
gnomAD ClinGen |
|
|
CA358638385 rs1364564669 |
111 | R>I | No |
ClinGen gnomAD |
|
| TCGA novel | 114 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771018128 CA3119262 |
115 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA3119261 rs749560268 |
116 | D>N | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1004251363 CA109024515 |
118 | Q>R | No |
Ensembl ClinGen |
|
|
rs778259831 CA3119260 |
119 | V>I | No |
ExAC gnomAD ClinGen |
|
|
rs780291073 CA3119258 |
120 | V>A | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA3119256 rs781494652 |
123 | V>L | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA3119255 rs755533001 |
124 | R>G | No |
ExAC gnomAD ClinGen |
|
|
CA3119253 rs375075355 |
125 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3119251 rs143601664 CA109024513 |
128 | M>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3119252 rs144454890 |
128 | M>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA109024209 COSM1428209 rs917244144 |
133 | W>* | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA358638202 rs1560788159 |
136 | S>G | No |
ClinGen Ensembl |
|
|
rs763988078 CA3119228 |
136 | S>N | No |
ExAC gnomAD ClinGen |
|
|
CA3119226 rs199672156 |
137 | V>M | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA358638186 rs1307260322 |
138 | V>A | No |
TOPMed gnomAD ClinGen |
|
|
CA3119224 rs763070485 |
139 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3119225 rs766561850 |
139 | G>R | No |
ExAC gnomAD ClinGen |
|
|
CA3119222 rs770103426 |
140 | A>E | No |
ExAC ClinGen |
|
|
CA358638168 rs1480127799 |
142 | E>Q | No |
Ensembl ClinGen |
|
|
CA358638160 rs1377164525 |
143 | S>P | No |
ClinGen gnomAD |
|
| TCGA novel | 143 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 147 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3119220 rs776839819 |
150 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA3119218 rs1553960046 |
150 | K>N | No |
ClinGen Ensembl |
|
| TCGA novel | 151 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3119217 rs368304065 |
153 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1473621418 CA358638087 |
154 | D>G | No |
gnomAD ClinGen |
|
|
rs201002849 CA3119216 |
154 | D>N | No |
ClinGen 1000Genomes ExAC |
|
|
CA109024208 rs978889110 |
158 | Q>R | No |
ClinGen Ensembl |
|
|
rs772578153 CA3119214 |
159 | Q>E | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs1486305738 CA358638050 |
160 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1486305738 CA358638049 |
160 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3119213 rs745330152 |
162 | D>N | No |
ExAC gnomAD ClinGen |
|
|
rs537194160 CA3119212 |
163 | C>R | No |
1000Genomes ExAC gnomAD ClinGen |
|
|
CA358638024 rs1483092586 |
163 | C>W | No |
ClinGen TOPMed gnomAD |
|
|
rs755173766 CA109024206 |
164 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs756868910 CA3119211 |
164 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755173766 CA109024207 |
164 | S>W | No |
ClinGen TOPMed gnomAD |
|
|
CA358638016 rs1382609033 |
165 | Y>C | No |
ClinGen gnomAD |
|
|
rs777416396 CA3119209 |
167 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA3119208 rs756003102 |
169 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA358637986 rs756003102 |
169 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA358637977 rs1310478392 |
170 | C>W | No |
ClinGen gnomAD |
|
|
CA3119207 rs752438499 |
171 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1275871105 CA358637973 |
171 | N>S | No |
TOPMed ClinGen |
|
|
CA109024205 rs374145943 |
172 | G>R | No |
ESP TOPMed gnomAD ClinGen |
|
|
CA3119206 rs143745102 |
173 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3119205 rs759578894 |
174 | S>F | No |
ExAC gnomAD ClinGen |
|
|
CA358637944 rs1475567225 |
176 | L>P | No |
gnomAD ClinGen |
|
|
CA358637947 rs1265474055 |
176 | L>V | No |
ClinGen Ensembl |
|
|
CA358637940 rs1370710873 |
177 | N>D | No |
gnomAD ClinGen |
|
| TCGA novel | 178 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3119203 rs765459427 |
180 | N>T | No |
ClinGen ExAC gnomAD |
|
|
CA358637919 rs1283476438 |
180 | N>Y | No |
ClinGen TOPMed |
|
|
rs761930154 CA358637909 |
181 | W>* | No |
ExAC TOPMed gnomAD ClinGen |
|
|
rs761930154 CA3119202 |
181 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA109024203 rs987221088 |
181 | W>L | No |
TOPMed gnomAD ClinGen |
|
|
rs1262822832 CA358637914 |
181 | W>R | No |
ClinGen gnomAD |
|
|
CA109024202 rs374298053 |
183 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA3119201 rs374298053 |
183 | N>T | No |
ExAC gnomAD ClinGen |
|
|
CA358637890 rs1213847590 |
184 | K>R | No |
ClinGen gnomAD |
|
|
CA3119180 rs767915906 |
185 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs775798569 CA3119181 |
185 | M>K | No |
ExAC gnomAD ClinGen |
|
|
CA3119179 rs760021850 |
186 | Q>* | No |
ExAC gnomAD ClinGen |
|
|
rs771345401 CA3119177 |
187 | V>I | No |
ExAC ClinGen |
|
|
CA3119175 rs535640319 |
193 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 196 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 197 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769458051 CA3119173 |
199 | A>T | No |
ExAC gnomAD ClinGen |
|
|
rs376527696 CA3119172 |
201 | N>D | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
| TCGA novel | 201 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs754890474 CA3119170 |
202 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754890474 CA3119171 |
202 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA358637750 rs1202044548 |
204 | C>R | No |
ClinGen gnomAD |
|
|
rs780085147 CA3119168 |
204 | C>Y | No |
ExAC gnomAD ClinGen |
|
|
CA109023956 rs373467360 |
205 | H>R | No |
ESP TOPMed gnomAD ClinGen |
|
|
CA358637730 rs150623992 |
206 | Y>* | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs200764150 CA3119166 |
208 | S>F | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA358637706 rs1202881337 |
210 | S>* | No |
gnomAD ClinGen |
|
|
CA3119165 rs141848549 |
211 | H>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA358637703 rs141848549 |
211 | H>Y | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA109023955 rs777630281 |
212 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed ClinGen NCI-TCGA |
|
CA358637671 rs1220720991 |
216 | I>V | No |
ClinGen gnomAD |
|
|
rs752972814 CA358637654 |
218 | G>A | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA358637655 rs1347474369 |
218 | G>C | No |
gnomAD ClinGen |
|
|
CA3119162 rs752972814 |
218 | G>D | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA3119163 COSM394521 rs752972814 |
218 | G>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs148501038 CA3119161 |
219 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA358637646 rs1416270374 |
220 | S>T | No |
TOPMed ClinGen |
|
|
rs1246375141 CA358637639 |
221 | A>S | No |
ClinGen Ensembl |
|
|
rs1310410473 CA358637624 |
223 | D>H | No |
ClinGen gnomAD |
|
|
CA3119159 rs751934098 |
225 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1471702302 CA358559476 |
226 | D>H | No |
gnomAD ClinGen |
|
|
CA358559455 rs1465552588 |
228 | E>D | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 228 | E>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1347602692 CA358559459 |
228 | E>* | No |
TOPMed ClinGen |
|
|
CA358559453 rs1334389012 |
229 | D>N | No |
ClinGen gnomAD |
|
|
rs1042180364 CA108849260 |
232 | A>T | No |
TOPMed ClinGen |
|
| TCGA novel | 233 | K>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA358559411 rs1328486030 |
234 | A>G | No |
gnomAD ClinGen |
|
|
rs765781141 CA358559415 |
234 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3119134 rs765781141 |
234 | A>T | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA358559413 rs1328486030 |
234 | A>V | No |
gnomAD ClinGen |
|
|
CA358559409 rs1291231780 |
235 | L>V | No |
gnomAD ClinGen |
|
|
rs761352356 CA3119133 |
236 | L>F | No |
ExAC gnomAD ClinGen |
|
|
CA108849246 rs796706035 |
237 | T>I | No |
ClinGen Ensembl |
|
|
rs776307472 CA358559379 |
240 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA3119132 rs776307472 |
240 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA108849205 rs144614643 |
241 | L>F | No |
1000Genomes ESP ExAC TOPMed gnomAD ClinGen |
|
|
rs925519057 CA108849195 |
244 | I>T | No |
Ensembl ClinGen |
|
|
CA358559342 COSM460662 rs1260348056 |
246 | D>V | cervix Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
TOPMed ClinGen cosmic curated NCI-TCGA |
|
CA358559334 rs1349907441 |
247 | A>G | No |
ClinGen gnomAD |
|
|
rs775329315 CA3119129 |
247 | A>S | No |
ExAC gnomAD ClinGen |
|
|
rs1426671485 CA358559332 |
248 | V>M | No |
TOPMed ClinGen |
|
|
CA3119128 rs142851384 |
250 | W>* | No |
ESP ExAC TOPMed gnomAD ClinGen |
|
|
CA108849169 rs371937185 |
251 | Q>K | No |
ESP TOPMed gnomAD ClinGen |
|
|
rs745811267 CA3119127 |
251 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
CA108849165 rs964170812 |
252 | D>N | No |
gnomAD ClinGen |
|
|
CA3119126 rs778647108 |
252 | D>V | No |
ExAC gnomAD ClinGen |
|
|
CA108849147 rs1054351989 |
253 | Y>* | No |
ClinGen TOPMed |
|
|
CA3119124 rs150110652 |
255 | G>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552008584 CA3119123 |
255 | G>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs150110652 CA358559218 |
255 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA358559202 rs1466710117 |
256 | G>D | No |
ClinGen TOPMed |
|
|
rs755170802 CA3119122 |
257 | I>V | No |
ExAC gnomAD ClinGen |
|
|
rs1223838339 CA358559182 |
258 | I>L | No |
ClinGen gnomAD |
|
|
CA108849108 rs932018305 |
258 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA108849091 rs746546421 |
259 | Q>* | No |
ClinGen TOPMed |
|
|
CA108849096 rs746546421 |
259 | Q>E | No |
ClinGen TOPMed |
|
|
CA358559161 rs1289787730 |
259 | Q>R | No |
ClinGen gnomAD |
|
|
rs1229612793 CA358559133 |
261 | H>D | No |
gnomAD ClinGen |
|
|
rs1229612793 CA358559131 |
261 | H>Y | No |
ClinGen gnomAD |
|
| TCGA novel | 263 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA358559086 rs1294980748 |
264 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA358559081 rs1433854604 |
264 | S>I | No |
ClinGen gnomAD |
|
| TCGA novel | 265 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3119121 rs751838108 |
265 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA358559052 rs1294822284 |
266 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA3119120 rs780460172 |
266 | E>V | No |
ExAC gnomAD ClinGen |
|
|
CA3119119 rs758621406 |
267 | A>V | No |
ExAC gnomAD ClinGen |
|
|
CA3119118 rs750811108 |
269 | H>L | No |
ClinGen ExAC gnomAD |
|
|
rs1308487825 CA358559003 |
269 | H>N | No |
TOPMed gnomAD ClinGen |
|
|
CA358558999 rs1308487825 |
269 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3119117 rs765609768 |
271 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3119116 rs757866604 |
272 | L>F | No |
ExAC TOPMed gnomAD ClinGen |
|
| TCGA novel | 272 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA358558929 rs1349601267 |
273 | I>M | No |
ClinGen TOPMed |
|
|
rs1193057537 CA358558938 |
273 | I>V | No |
ClinGen gnomAD |
|
|
CA3119114 rs763749060 |
274 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA3119112 rs760393290 |
275 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA358558913 CA358558911 rs1560784237 |
275 | G>R | No |
ClinGen Ensembl |
|
|
CA358558872 rs1484606715 |
277 | D>G | No |
TOPMed ClinGen |
|
|
CA358558847 rs1206440253 |
279 | T>R | No |
gnomAD ClinGen |
|
|
rs773995247 CA3119090 |
281 | S>R | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA358558442 rs1464770701 |
282 | T>N | No |
gnomAD ClinGen |
|
|
rs1160069432 CA358558434 |
283 | P>L | No |
ClinGen gnomAD |
|
|
CA358558409 rs1226480902 |
287 | V>M | No |
TOPMed ClinGen |
|
|
COSM173227 CA3119086 rs138871272 |
288 | R>Q | large_intestine [Cosmic] | No |
ESP ExAC TOPMed gnomAD ClinGen cosmic curated |
|
CA3119087 rs773065737 |
288 | R>W | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA358558396 rs1181646417 |
289 | N>S | No |
ClinGen gnomAD |
|
|
rs912020539 CA108847604 |
290 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA358558384 rs1228087195 |
291 | W>* | No |
ClinGen gnomAD |
|
|
CA3119085 rs747008200 |
292 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA3119084 rs775666552 |
292 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA358558369 rs1268366703 |
293 | S>I | No |
ClinGen gnomAD |
|
|
rs987676673 CA108847580 |
294 | S>C | No |
ClinGen TOPMed |
|
|
CA358558343 rs1260099973 |
297 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA358558342 rs1260099973 |
297 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs772150509 CA3119083 |
297 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA358558336 rs1358576615 |
298 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
TOPMed gnomAD ClinGen NCI-TCGA |
|
CA358558338 rs1358576615 |
298 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs746154719 CA3119082 |
299 | G>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 300 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779410656 CA358558313 |
302 | H>D | No |
ExAC gnomAD ClinGen |
|
|
rs779410656 CA3119081 |
302 | H>Y | No |
ExAC gnomAD ClinGen |
|
|
rs749677866 CA3119079 |
303 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1395222300 CA358558305 |
303 | V>F | No |
ClinGen gnomAD |
|
| TCGA novel | 306 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145957354 CA3119078 |
307 | S>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ESP ExAC gnomAD ClinGen NCI-TCGA |
|
CA3119077 rs756668381 |
308 | N>D | No |
ClinGen ExAC gnomAD |
|
|
CA358558269 rs752109298 |
308 | N>I | No |
ExAC TOPMed gnomAD ClinGen |
|
|
CA3119076 rs752109298 |
308 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1458899198 CA358558255 |
310 | C>F | No |
gnomAD ClinGen |
|
|
CA3119051 rs74639819 |
311 | G>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs754573261 CA3119074 |
311 | G>S | No |
ExAC gnomAD ClinGen |
|
|
rs751081061 CA3119050 |
312 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA3119049 rs377108759 |
313 | A>T | No |
ExAC TOPMed gnomAD ClinGen |
|
| TCGA novel | 315 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374282693 CA3119047 |
316 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 317 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1269756877 CA358557877 |
319 | I>T | No |
gnomAD ClinGen |
|
|
rs1560782737 COSM207114 CA358557863 |
321 | V>A | large_intestine [Cosmic] | No |
Ensembl ClinGen cosmic curated |
|
CA555624790 rs1332857348 |
322 | V>T | No |
gnomAD ClinGen |
No associated diseases with P43234
1 regional properties for P43234
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Enoyl-CoA hydratase/isomerase, conserved site | 143 - 163 | IPR018376 |
Functions
| Description | ||
|---|---|---|
| EC Number | 3.4.22.42 | Cysteine endopeptidases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
| lysosome | A small lytic vacuole that has cell cycle-independent morphology found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| cysteine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
| proteolysis involved in protein catabolic process | The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells. |
6 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P56202 | CTSW | Cathepsin W | Homo sapiens (Human) | PR |
| P09668 | CTSH | Pro-cathepsin H | Homo sapiens (Human) | PR |
| Q9UJW2 | TINAG | Tubulointerstitial nephritis antigen | Homo sapiens (Human) | PR |
| P56203 | Ctsw | Cathepsin W | Mus musculus (Mouse) | PR |
| Q8BM88 | Ctso | Cathepsin O | Mus musculus (Mouse) | PR |
| P43296 | RD19A | Cysteine protease RD19A | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDVRALPWLP | WLLWLLCRGG | GDADSRAPFT | PTWPRSRERE | AAAFRESLNR | HRYLNSLFPS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| ENSTAFYGIN | QFSYLFPEEF | KAIYLRSKPS | KFPRYSAEVH | MSIPNVSLPL | RFDWRDKQVV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TQVRNQQMCG | GCWAFSVVGA | VESAYAIKGK | PLEDLSVQQV | IDCSYNNYGC | NGGSTLNALN |
| 190 | 200 | 210 | 220 | 230 | 240 |
| WLNKMQVKLV | KDSEYPFKAQ | NGLCHYFSGS | HSGFSIKGYS | AYDFSDQEDE | MAKALLTFGP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LVVIVDAVSW | QDYLGGIIQH | HCSSGEANHA | VLITGFDKTG | STPYWIVRNS | WGSSWGVDGY |
| 310 | 320 | ||||
| AHVKMGSNVC | GIADSVSSIF | V |