Q9Y2J2
Gene name |
EPB41L3 |
Protein name |
Band 4.1-like protein 3 |
Names |
4.1B, Differentially expressed in adenocarcinoma of the lung protein 1, DAL-1, Erythrocyte membrane protein band 4.1-like 3 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23136 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
55 structures for Q9Y2J2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2HE7 | X-ray | 200 A | A | 108-390 | PDB |
| 3BIN | X-ray | 230 A | A | 109-390 | PDB |
| 5RYM | X-ray | 164 A | A | 107-390 | PDB |
| 5RYN | X-ray | 188 A | A | 107-390 | PDB |
| 5RYO | X-ray | 158 A | A | 107-390 | PDB |
| 5RYP | X-ray | 163 A | A | 107-390 | PDB |
| 5RYQ | X-ray | 164 A | A | 107-390 | PDB |
| 5RYR | X-ray | 187 A | A | 107-390 | PDB |
| 5RYS | X-ray | 175 A | A | 107-390 | PDB |
| 5RYT | X-ray | 172 A | A | 107-390 | PDB |
| 5RYU | X-ray | 163 A | A | 107-390 | PDB |
| 5RYV | X-ray | 169 A | A | 107-390 | PDB |
| 5RYW | X-ray | 166 A | A | 107-390 | PDB |
| 5RYX | X-ray | 163 A | A | 107-390 | PDB |
| 5RYY | X-ray | 169 A | A | 107-390 | PDB |
| 5RYZ | X-ray | 161 A | A | 107-390 | PDB |
| 5RZ0 | X-ray | 174 A | A | 107-390 | PDB |
| 5RZ1 | X-ray | 162 A | A | 107-390 | PDB |
| 5RZ2 | X-ray | 177 A | A | 107-390 | PDB |
| 5RZ3 | X-ray | 174 A | A | 107-390 | PDB |
| 5RZ4 | X-ray | 161 A | A | 107-390 | PDB |
| 5RZ5 | X-ray | 163 A | A | 107-390 | PDB |
| 5RZ6 | X-ray | 164 A | A | 107-390 | PDB |
| 5RZ7 | X-ray | 176 A | A | 107-390 | PDB |
| 5RZ8 | X-ray | 166 A | A | 107-390 | PDB |
| 5RZ9 | X-ray | 179 A | A | 107-390 | PDB |
| 5RZA | X-ray | 189 A | A | 107-390 | PDB |
| 5RZB | X-ray | 159 A | A | 107-390 | PDB |
| 5RZC | X-ray | 175 A | A | 107-390 | PDB |
| 5RZD | X-ray | 181 A | A | 107-390 | PDB |
| 5RZE | X-ray | 169 A | A | 107-390 | PDB |
| 5RZF | X-ray | 176 A | A | 107-390 | PDB |
| 5RZG | X-ray | 170 A | A | 107-390 | PDB |
| 5RZH | X-ray | 188 A | A | 107-390 | PDB |
| 5RZI | X-ray | 209 A | A | 107-390 | PDB |
| 5RZJ | X-ray | 168 A | A | 107-390 | PDB |
| 5RZK | X-ray | 184 A | A | 107-390 | PDB |
| 5RZL | X-ray | 171 A | A | 107-390 | PDB |
| 5RZM | X-ray | 171 A | A | 107-390 | PDB |
| 5RZN | X-ray | 183 A | A | 107-390 | PDB |
| 5RZO | X-ray | 197 A | A | 107-390 | PDB |
| 5RZP | X-ray | 170 A | A | 107-390 | PDB |
| 5RZQ | X-ray | 188 A | A | 107-390 | PDB |
| 5RZR | X-ray | 178 A | A | 107-390 | PDB |
| 5RZS | X-ray | 169 A | A | 107-390 | PDB |
| 5RZT | X-ray | 179 A | A | 107-390 | PDB |
| 5RZU | X-ray | 166 A | A | 107-390 | PDB |
| 5RZV | X-ray | 175 A | A | 107-390 | PDB |
| 5RZW | X-ray | 162 A | A | 107-390 | PDB |
| 5RZX | X-ray | 174 A | A | 107-390 | PDB |
| 5RZY | X-ray | 175 A | A | 107-390 | PDB |
| 5RZZ | X-ray | 176 A | A | 107-390 | PDB |
| 5S00 | X-ray | 177 A | A | 107-390 | PDB |
| 6IBE | X-ray | 145 A | A | 107-390 | PDB |
| AF-Q9Y2J2-F1 | Predicted | AlphaFoldDB |
929 variants for Q9Y2J2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1444108809 CA402012150 |
2 | T>R | No |
ClinGen Ensembl |
|
|
CA402012129 rs1430254072 |
5 | S>F | No |
ClinGen gnomAD |
|
|
CA402012132 rs1172922066 |
5 | S>P | No |
ClinGen gnomAD |
|
|
CA402012098 rs1428045848 |
10 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA402012097 rs1428045848 |
10 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
rs756185800 CA8878234 |
13 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA402012077 rs1183883231 |
13 | P>L | No |
ClinGen gnomAD |
|
|
CA402012075 rs1568401438 |
14 | D>H | No |
ClinGen Ensembl |
|
|
CA296202199 rs575037905 |
15 | Q>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 16 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs750617383 CA8878232 |
18 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs370004609 CA8878231 |
21 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1009731371 CA402012014 |
22 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1009731371 COSM296476 CA296202198 |
22 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA8878230 rs762053703 |
23 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs762937199 CA402012003 |
24 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8878227 rs762937199 |
24 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1599673799 CA402012007 |
24 | G>R | No |
ClinGen Ensembl |
|
|
CA402012002 rs376398436 |
25 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8878226 rs376398436 |
25 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA402011998 rs1357547181 |
25 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs924628605 CA402011986 |
27 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA402011989 rs1372304112 |
27 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs924628605 CA296202197 |
27 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA402011987 rs1372304112 |
27 | G>W | No |
ClinGen TOPMed gnomAD |
|
|
rs745419936 CA8878224 |
28 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
| TCGA novel | 28 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402011976 rs776307591 |
29 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402011977 rs1469881115 |
29 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA8878223 rs776307591 |
29 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770671688 CA8878222 |
30 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779282144 CA402011969 |
31 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs779282144 CA8878220 |
31 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1568400239 CA402011965 |
31 | A>V | No |
ClinGen Ensembl |
|
|
rs926296934 CA296202194 |
32 | P>H | No |
ClinGen TOPMed |
|
|
CA8878216 rs749768790 |
33 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1397759498 CA402011959 |
33 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA402011949 rs1265457248 |
34 | P>L | No |
ClinGen gnomAD |
|
|
rs1265457248 CA402011950 |
34 | P>R | No |
ClinGen gnomAD |
|
|
rs1044974996 CA296202192 |
35 | E>G | No |
ClinGen TOPMed |
|
|
CA8878214 rs61735458 RCV000889800 |
36 | P>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8878213 rs750462293 |
37 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1352173198 CA402011932 |
37 | P>L | No |
ClinGen gnomAD |
|
|
CA8878210 rs576839943 |
38 | K>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs767588326 CA8878211 |
38 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402011925 rs1214375007 |
39 | E>K | No |
ClinGen TOPMed |
|
| TCGA novel | 40 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1459966391 CA402011908 |
41 | Q>E | No |
ClinGen gnomAD |
|
|
CA402011906 rs1417392982 |
41 | Q>P | No |
ClinGen gnomAD |
|
|
rs762698133 CA8878207 |
42 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8878208 rs762698133 |
42 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1362481923 CA402011885 |
44 | A>T | No |
ClinGen gnomAD |
|
|
rs759581292 CA8878204 |
46 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1466780870 CA402011849 |
49 | A>G | No |
ClinGen gnomAD |
|
|
CA402011852 rs1599671520 |
49 | A>P | No |
ClinGen Ensembl |
|
|
CA402011847 rs1272141262 |
50 | A>T | No |
ClinGen gnomAD |
|
|
rs760393116 CA8878201 |
51 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA402011839 rs1352407489 |
51 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1005815192 CA296202189 |
53 | A>P | No |
ClinGen Ensembl |
|
|
CA8878200 rs376734530 COSM1251247 |
53 | A>V | oesophagus [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA296202188 rs747581604 |
54 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1303384861 CA402011816 |
55 | S>I | No |
ClinGen gnomAD |
|
|
rs1438769433 CA402011806 |
56 | T>I | No |
ClinGen gnomAD |
|
|
CA402011807 rs1438769433 |
56 | T>S | No |
ClinGen gnomAD |
|
|
rs769039231 CA8878199 |
57 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402011802 rs769039231 |
57 | P>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1321456215 CA402011803 |
57 | P>S | No |
ClinGen gnomAD |
|
|
rs150166347 CA8878196 |
59 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM2151846 CA8878197 COSM3403578 rs780498839 |
59 | R>W | Variant assessed as Somatic; 0.0 impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1452015656 CA402011784 |
61 | E>K | No |
ClinGen gnomAD |
|
|
CA8878173 rs758487101 |
63 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA402011747 rs1269812783 |
64 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 65 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 66 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 67 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402011714 rs1311396113 |
68 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 70 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA296200955 rs1005045804 |
72 | R>G | No |
ClinGen gnomAD |
|
|
rs778840438 CA8878171 |
74 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754890475 CA8878170 |
75 | K>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1230011388 CA402011653 |
77 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1230011388 CA402011654 |
77 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1197421046 CA402011651 |
78 | E>K | No |
ClinGen TOPMed |
|
|
CA402011638 rs1166823871 |
79 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
CA402011634 rs1283679414 |
80 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1435829804 CA402011624 |
81 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA296200953 rs867719226 |
84 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA296200952 rs867719226 |
84 | D>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 87 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749836610 CA8878166 |
88 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA8878167 rs370452607 |
88 | S>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8878165 rs746460874 |
89 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA296200950 rs905547822 |
92 | S>C | No |
ClinGen Ensembl |
|
|
rs1272292130 CA402011551 |
92 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1350890804 CA402011546 |
93 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
CA296200949 rs779581614 |
95 | K>R | No |
ClinGen Ensembl |
|
|
CA402011522 rs1233026087 |
96 | L>F | No |
ClinGen gnomAD |
|
|
rs777002757 CA8878160 |
97 | S>A | No |
ClinGen ExAC gnomAD |
|
|
rs142277051 CA402011510 |
98 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8878159 rs142277051 |
98 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1372444341 CA402011502 |
100 | P>A | No |
ClinGen Ensembl |
|
|
rs1568352698 CA402011493 |
101 | L>S | No |
ClinGen Ensembl |
|
|
CA296200947 TCGA novel rs757891782 |
102 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen gnomAD NCI-TCGA |
|
rs1327558627 CA402011478 |
103 | I>T | No |
ClinGen gnomAD |
|
|
CA296200946 rs750074788 |
106 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
TCGA novel rs772255360 CA8878157 |
107 | P>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC TOPMed gnomAD NCI-TCGA |
|
rs772255360 CA8878156 |
107 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs117900256 CA8878155 |
109 | S>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA402011440 rs117900256 |
109 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8878154 rs755269960 |
109 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA8878152 rs749048325 |
111 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA296200944 rs113126204 |
115 | I>M | No |
ClinGen Ensembl |
|
|
rs779996389 CA8878151 |
116 | L>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 117 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1469911854 CA402011382 |
118 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1469911854 CA402011380 |
118 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs746452001 CA296200943 |
119 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs746452001 CA402011371 |
119 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1213371473 CA402011374 |
119 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 120 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 121 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA402011357 rs1568352005 |
121 | E>D | No |
ClinGen Ensembl |
|
|
rs757631686 CA8878148 |
121 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 122 | Y>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 125 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751193433 CA8878146 |
126 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs372730881 CA8878126 COSM74522 |
129 | R>C | ovary Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8878125 rs752408777 |
129 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA401828009 rs752408777 |
129 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs372730881 CA8878127 |
129 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 130 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 131 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8878123 rs761144764 |
134 | V>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 137 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8878122 rs750772806 |
138 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 138 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8878121 rs768025586 |
139 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1196200227 CA401827939 |
140 | C>Y | No |
ClinGen TOPMed |
|
|
rs1485672079 CA401827934 |
141 | E>Q | No |
ClinGen gnomAD |
|
|
CA401827915 rs1238342368 |
143 | L>S | No |
ClinGen gnomAD |
|
| TCGA novel | 146 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1416891612 CA401827883 |
148 | K>E | No |
ClinGen TOPMed |
|
|
CA401827848 rs1349843200 |
152 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA295716241 rs1040973290 |
153 | L>F | No |
ClinGen Ensembl |
|
|
CA8878119 rs201907753 |
154 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8878117 rs763263654 |
155 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA401827825 rs141362076 |
156 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs141362076 CA8878116 |
156 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM3742647 rs1380114884 COSM3742648 CA401827821 |
157 | D>G | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs769452515 CA8878115 |
157 | D>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 160 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401827791 rs1050518242 COSM1710946 |
161 | Q>L | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1050518242 CA295716217 |
161 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA401827748 rs1391830450 |
165 | L>W | No |
ClinGen gnomAD |
|
|
rs754616014 CA8878104 |
167 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 168 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 169 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401827723 rs1599005317 |
169 | K>T | No |
ClinGen Ensembl |
|
|
rs1418806113 CA401827717 |
170 | E>K | No |
ClinGen gnomAD |
|
|
rs750729750 CA8878103 |
171 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA401827693 rs1568201977 |
173 | K>T | No |
ClinGen Ensembl |
|
| rs1474424767 | 174 | Q>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8878102 rs549933763 |
175 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs762396487 CA8878101 |
176 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8878081 rs757736010 |
180 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA8878080 rs752088439 |
180 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA295711339 rs1035835056 |
181 | H>Q | No |
ClinGen Ensembl |
|
|
CA401827106 rs1288762698 |
181 | H>Y | No |
ClinGen gnomAD |
|
|
CA401827053 rs1205467303 |
183 | S>P | No |
ClinGen gnomAD |
|
|
rs1352651381 CA401827037 |
184 | F>L | No |
ClinGen gnomAD |
|
|
rs369470003 CA8878079 |
185 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs759007542 CA8878078 |
186 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1371649798 CA401826898 |
192 | D>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 193 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1305675835 CA401826893 |
193 | P>T | No |
ClinGen gnomAD |
|
|
rs752757777 CA8878077 |
194 | A>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 198 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8878075 rs759791744 |
200 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs375147810 CA295708712 |
203 | Y>D | No |
ClinGen ESP TOPMed |
|
|
CA401826365 rs1208716450 |
204 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs767353558 CA8878053 |
206 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA401826304 rs1201891671 |
208 | Q>R | No |
ClinGen TOPMed |
|
|
CA401826291 rs368600153 |
209 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM274981 rs1268000108 COSM4140117 CA401826276 |
210 | R>* | ovary large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA8878050 rs768190757 |
210 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA401826264 rs1234278432 |
211 | D>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1478683218 CA401826220 |
213 | I>V | No |
ClinGen TOPMed |
|
|
rs775170222 CA8878048 |
214 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 215 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401826168 COSM1165618 rs778271797 CA8878045 |
216 | G>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD NCI-TCGA |
|
CA295708675 rs958078164 |
221 | S>C | No |
ClinGen TOPMed |
|
|
rs1050524340 CA295708658 |
222 | F>V | No |
ClinGen Ensembl |
|
| TCGA novel | 226 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1393833549 CA401825998 |
226 | A>V | No |
ClinGen gnomAD |
|
|
CA8878041 rs755535084 |
231 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA401825911 rs181887485 |
232 | T>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8878040 rs181887485 |
232 | T>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1338414605 CA401825902 |
233 | V>A | No |
ClinGen TOPMed |
|
| TCGA novel | 233 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA295708613 rs201054385 |
234 | Q>H | No |
ClinGen Ensembl |
|
|
CA8878038 rs756311216 |
234 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs768186514 CA295708606 |
236 | E>Q | No |
ClinGen Ensembl |
|
|
CA295708598 COSM122856 rs960237079 |
238 | G>R | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs368191543 CA8878036 |
239 | D>E | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1214488356 CA401825790 |
240 | Y>S | No |
ClinGen gnomAD |
|
|
rs751392387 CA8878034 |
242 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA8878033 rs763897171 |
243 | D>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 243 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1555678921 CA401825717 |
245 | C>Y | No |
ClinGen Ensembl |
|
|
rs775082494 COSM989086 CA8878031 |
248 | D>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA401825643 rs1374097412 |
250 | I>V | No |
ClinGen gnomAD |
|
|
CA8878029 rs759259984 |
251 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1396248219 CA401825626 |
251 | S>N | No |
ClinGen gnomAD |
|
|
CA401825608 rs1162401550 |
252 | E>D | No |
ClinGen gnomAD |
|
|
CA8878028 rs374307563 |
254 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA295708556 rs1022415466 |
254 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA401825554 rs1468545754 |
257 | P>R | No |
ClinGen gnomAD |
|
|
rs1011007395 CA295708547 |
259 | H>R | No |
ClinGen gnomAD |
|
|
CA401825510 rs1194372589 |
260 | T>A | No |
ClinGen gnomAD |
|
|
rs748416389 CA8878026 |
260 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs564256996 CA8878025 |
261 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401825433 rs1317968511 |
265 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 267 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200272088 CA8878023 |
268 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8878021 rs750621088 COSM989083 |
269 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs750621088 CA8878020 |
269 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1353628903 CA401825328 |
272 | K>E | No |
ClinGen gnomAD |
|
|
CA401825301 rs1307851685 |
273 | S>R | No |
ClinGen gnomAD |
|
|
CA401825281 rs1363695306 |
275 | R>* | No |
ClinGen TOPMed |
|
| TCGA novel | 275 | R>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1436647162 CA401825225 |
276 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs376210046 COSM266465 CA8878000 |
278 | T>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs886227861 CA295708262 |
279 | P>A | No |
ClinGen Ensembl |
|
|
CA295708256 rs1056947311 |
282 | A>G | No |
ClinGen gnomAD |
|
|
CA8877996 rs376224922 |
284 | M>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877997 rs376224922 |
284 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 285 | H>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1249621070 CA401825125 |
285 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA401825116 rs1442925401 |
286 | F>V | No |
ClinGen gnomAD |
|
|
CA8877995 rs570437639 |
290 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401825062 rs1258430049 |
290 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1568150789 CA401825061 |
291 | K>Q | No |
ClinGen Ensembl |
|
| TCGA novel | 292 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877994 rs755001818 |
292 | K>R | No |
ClinGen ExAC gnomAD |
|
| rs1484979313 | 293 | L>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 293 | L>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs549147515 CA8877993 |
295 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs945752024 CA295708213 |
296 | Y>C | No |
ClinGen TOPMed |
|
| TCGA novel | 296 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1598873362 CA401824984 |
298 | V>I | No |
ClinGen Ensembl |
|
| TCGA novel | 299 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1216565317 CA401824944 |
301 | H>R | No |
ClinGen gnomAD |
|
|
rs529409638 CA8877989 |
302 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401824809 rs944467652 |
305 | D>E | No |
ClinGen gnomAD |
|
|
CA401824790 rs1376232779 |
308 | G>E | No |
ClinGen TOPMed |
|
|
rs754909102 CA8877976 |
308 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1414421554 CA401824766 |
312 | M>V | No |
ClinGen TOPMed |
|
| TCGA novel | 313 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1234933383 CA401824748 |
314 | G>E | No |
ClinGen gnomAD |
|
|
CA401824740 rs1311104135 |
315 | V>G | No |
ClinGen TOPMed |
|
|
CA8877975 rs753876871 |
316 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1392021881 CA401824680 COSM1177060 |
324 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA295704346 rs965134652 |
325 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA295704345 rs1050259718 |
326 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1237615415 COSM989077 CA401824670 |
326 | R>Q | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1050259718 COSM2154820 COSM3403572 CA401824672 |
326 | R>W | Variant assessed as Somatic; impact. central_nervous_system [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA295704344 rs867881127 |
328 | R>L | No |
ClinGen Ensembl |
|
|
rs1395521426 CA401824653 |
329 | I>M | No |
ClinGen gnomAD |
|
|
CA401824636 rs1348102263 |
332 | F>L | No |
ClinGen TOPMed |
|
|
rs931882561 CA295704343 |
333 | A>G | No |
ClinGen Ensembl |
|
|
CA295704338 rs920541028 |
335 | P>L | No |
ClinGen Ensembl |
|
|
rs767116095 CA401824601 |
337 | V>F | No |
ClinGen ExAC gnomAD |
|
|
rs767116095 CA8877971 |
337 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 342 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877969 rs775774159 |
342 | Y>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1239403270 CA401824561 |
343 | K>R | No |
ClinGen gnomAD |
|
|
CA401824554 rs1568125288 |
344 | R>Q | No |
ClinGen Ensembl |
|
|
rs1438985752 CA401824555 |
344 | R>W | No |
ClinGen TOPMed |
|
|
rs1457005567 CA401824550 |
345 | N>D | No |
ClinGen gnomAD |
|
|
rs765649112 CA8877968 |
345 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs777237089 CA8877966 |
346 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA401824517 rs1239593020 |
349 | I>S | No |
ClinGen gnomAD |
|
|
CA401824500 rs1318689691 |
351 | I>M | No |
ClinGen gnomAD |
|
|
rs377615645 CA401824497 |
352 | R>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs377615645 CA8877963 |
352 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
rs763472908 CA8877964 |
352 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1396035478 CA401824489 |
354 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 355 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 355 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs374596275 CA8877934 |
356 | F>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 361 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1224793974 CA401823982 |
362 | T>I | No |
ClinGen TOPMed |
|
|
rs1598760528 CA401823990 |
362 | T>P | No |
ClinGen Ensembl |
|
|
rs1026803726 CA295701754 |
368 | P>T | No |
ClinGen Ensembl |
|
|
CA401823892 rs961216947 |
371 | R>* | No |
ClinGen gnomAD |
|
|
rs1024857735 CA295701735 |
372 | A>V | No |
ClinGen Ensembl |
|
|
CA401823873 rs1401046522 |
373 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1598760145 CA401823867 |
374 | K>E | No |
ClinGen Ensembl |
|
|
CA295701724 rs935184617 |
375 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA8877930 rs758020564 COSM1756971 COSM3932841 |
375 | R>H | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA401823854 rs935184617 |
375 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8877928 rs535868224 |
379 | V>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM989070 CA295701701 rs895808154 |
382 | E>G | endometrium [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1568104686 CA401823729 |
386 | F>Y | No |
ClinGen Ensembl |
|
| TCGA novel | 387 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877910 rs777272293 |
390 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA8877909 rs758014675 |
392 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1200063591 CA401823603 |
394 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA401823592 rs1323940276 |
394 | A>V | No |
ClinGen gnomAD |
|
|
rs780466257 CA8877907 |
396 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs756480325 CA8877906 |
401 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA401823418 rs1374164318 |
407 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs757841955 CA8877903 |
407 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1436919640 CA401823402 |
408 | Y>F | No |
ClinGen gnomAD |
|
|
rs1351331864 CA401823352 |
410 | G>V | No |
ClinGen gnomAD |
|
|
CA401823322 COSM709319 rs1421924875 |
411 | R>S | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA8877901 rs764136707 |
412 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs775613980 CA8877899 |
414 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877898 rs765059108 |
414 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401823249 rs1194440034 |
416 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA8877896 rs776444381 |
416 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA401823247 rs1194440034 |
416 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8877893 rs772769794 |
420 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA295701291 rs754674772 |
421 | A>V | No |
ClinGen gnomAD |
|
|
rs1241680830 CA401823107 |
422 | L>V | No |
ClinGen gnomAD |
|
|
COSM1251248 CA401822983 rs1350949619 |
425 | R>H | Variant assessed as Somatic; 0.0 impact. oesophagus large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs778377203 CA8877890 |
429 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs1225912222 CA401822863 |
431 | E>A | No |
ClinGen TOPMed |
|
|
rs1291547093 CA401822845 |
432 | R>H | No |
ClinGen gnomAD |
|
| TCGA novel | 433 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1289524354 CA401822821 |
433 | S>P | No |
ClinGen TOPMed |
|
|
CA8877889 rs201007636 |
436 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1300022203 CA401822720 |
437 | R>C | No |
ClinGen gnomAD |
|
|
CA8877887 rs781699049 |
437 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1176922439 CA401822643 |
440 | M>V | No |
ClinGen gnomAD |
|
|
CA8877886 rs757823896 |
442 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM989068 CA295701222 rs201730957 |
442 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs201730957 CA8877885 |
442 | R>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1332659760 CA401822498 |
445 | D>A | No |
ClinGen gnomAD |
|
|
CA8877883 rs758456549 |
446 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs11661706 | 447 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877860 rs755182888 |
448 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 449 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877859 rs754128977 |
449 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401820826 rs1397848074 |
450 | T>N | No |
ClinGen gnomAD |
|
| TCGA novel | 452 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1598711449 CA401820794 |
453 | Y>D | No |
ClinGen Ensembl |
|
|
CA8877857 rs145954134 |
454 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 455 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877855 rs767287627 |
457 | K>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA401820725 rs761821278 |
458 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401820731 rs1598711123 |
458 | G>S | No |
ClinGen Ensembl |
|
|
rs761821278 CA8877854 |
458 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401820708 rs1483673303 |
459 | I>M | No |
ClinGen gnomAD |
|
|
CA401820672 rs1568081438 |
462 | T>S | No |
ClinGen Ensembl |
|
|
CA401820666 rs1254527681 |
463 | N>H | No |
ClinGen gnomAD |
|
|
rs1253412424 CA401820638 |
464 | L>F | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 465 | I>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762690750 CA8877851 |
467 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769584275 CA8877849 |
470 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401820532 rs1262974872 |
472 | K>N | No |
ClinGen TOPMed |
|
|
CA8877847 rs747269632 |
472 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs146356489 CA8877846 |
473 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 475 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772407788 CA401820474 |
476 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776994193 CA8877843 |
478 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748736095 CA8877844 |
478 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs550620428 CA8877842 |
479 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs944527203 CA295695626 |
480 | E>D | No |
ClinGen Ensembl |
|
|
CA8877840 rs780187679 |
480 | E>K | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1379386905 CA401820414 |
481 | E>G | No |
ClinGen gnomAD |
|
|
CA401820405 rs1410237213 |
482 | E>Q | No |
ClinGen TOPMed |
|
|
CA295695616 rs1045892067 |
483 | D>E | No |
ClinGen gnomAD |
|
|
CA401820376 rs1391822000 |
484 | K>E | No |
ClinGen gnomAD |
|
|
rs767397189 CA8877837 |
485 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877838 rs767397189 |
485 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM564257 rs188980250 CA295695613 |
485 | R>W | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes gnomAD |
|
CA8877836 rs757113359 |
486 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs375665706 CA8877835 |
488 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA8877832 rs775143739 |
490 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1436870485 CA401820260 |
491 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA8877829 rs142122200 |
492 | T>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1680198 CA8877830 rs142122200 |
492 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8877831 rs142122200 |
492 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877826 rs545415448 |
494 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
COSM709321 rs769159490 CA8877825 |
495 | S>L | lung Variant assessed as Somatic; 0.0 impact. large_intestine [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs930221423 CA295695583 |
496 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA295695571 rs1054285651 |
497 | I>M | No |
ClinGen TOPMed |
|
|
CA401820194 rs1239643913 |
497 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1239643913 CA401820192 |
497 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs117538203 CA401820178 |
498 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM4131019 RCV000963958 COSM4131018 CA8877822 rs117538203 |
498 | R>Q | thyroid [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM1734877 CA8877823 rs200213263 |
498 | R>W | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs780846021 CA8877820 |
499 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877818 rs751325467 |
500 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA8877819 rs757135327 |
500 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775911998 CA8877816 |
501 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8877817 rs764056090 |
501 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs775911998 CA401820144 |
501 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs753296952 CA401819193 |
503 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877788 rs753296952 |
503 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766019164 CA8877787 |
506 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs760271032 CA8877786 |
509 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA8877785 rs564665638 |
510 | S>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401819137 rs1316585939 |
512 | P>S | No |
ClinGen gnomAD |
|
|
rs1270200800 CA401819127 |
513 | L>F | No |
ClinGen gnomAD |
|
|
rs770217031 CA8877781 |
515 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770217031 CA8877782 |
515 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1568062116 CA401819115 |
516 | P>A | No |
ClinGen Ensembl |
|
|
CA8877778 rs771135161 |
517 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374487187 CA8877777 |
518 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877775 rs772057472 |
519 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772057472 CA295693171 |
519 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1167186632 CA401819088 |
520 | C>* | No |
ClinGen gnomAD |
|
| TCGA novel | 521 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401819078 rs1239231130 |
522 | P>S | No |
ClinGen gnomAD |
|
|
CA8877771 rs753344299 |
523 | T>A | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 523 | T>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753344299 CA401819073 |
523 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs199822438 CA295693152 |
525 | P>L | No |
ClinGen gnomAD |
|
|
CA401819053 rs1456672482 |
526 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1456672482 CA401819055 |
526 | T>K | No |
ClinGen gnomAD |
|
|
CA401819042 rs1490080766 |
528 | L>F | No |
ClinGen TOPMed |
|
|
rs150384501 CA8877769 |
529 | R>C | Variant assessed as Somatic; 9.268e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877768 rs535925015 |
529 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA401819035 rs535925015 |
529 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8877767 rs764431403 |
530 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs763247088 CA401819022 |
531 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401819025 rs1448130298 |
531 | R>T | No |
ClinGen TOPMed |
|
|
CA295693144 rs148074485 |
532 | C>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1331701673 CA401819009 |
533 | K>N | No |
ClinGen gnomAD |
|
|
rs753008817 CA8877765 |
533 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765736013 CA8877764 |
534 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA8877763 rs759982893 |
535 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs776750033 CA8877762 |
535 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA401818996 rs1384906862 |
535 | N>K | No |
ClinGen TOPMed |
|
|
rs1222073539 CA401818992 |
536 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs375525801 CA8877761 |
537 | C>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 538 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 539 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773624800 CA8877759 |
541 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs372345879 CA8877760 |
541 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772432794 CA8877758 |
543 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs369688255 COSM1710944 CA8877757 |
544 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1438092664 CA401818940 |
544 | P>S | No |
ClinGen gnomAD |
|
|
CA401818931 rs1453812770 |
545 | S>F | No |
ClinGen gnomAD |
|
|
CA401818921 rs1598654650 |
547 | A>S | No |
ClinGen Ensembl |
|
|
CA401818905 rs1598654508 |
549 | H>P | No |
ClinGen Ensembl |
|
|
rs1288420397 CA401818907 |
549 | H>Y | No |
ClinGen gnomAD |
|
|
CA401818891 rs1450234553 |
551 | P>L | No |
ClinGen gnomAD |
|
|
CA401818877 rs1166256792 |
553 | E>D | No |
ClinGen Ensembl |
|
|
CA8877754 rs749227489 |
554 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs768620034 CA8877755 |
554 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
VAR_048353 rs9966357 COSM3692148 CA8877752 |
555 | A>T | thyroid large_intestine [Cosmic] | No |
ClinGen cosmic curated UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA8877751 rs745397874 |
556 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs1242135727 CA401818861 |
557 | D>N | No |
ClinGen TOPMed |
|
|
CA401818858 rs1278700547 |
557 | D>V | No |
ClinGen gnomAD |
|
|
rs1436987158 CA401818852 |
558 | S>P | No |
ClinGen gnomAD |
|
|
CA8877750 rs780756917 |
559 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA401818838 rs1301148647 |
560 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 561 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401818832 rs1423951529 |
561 | P>Q | No |
ClinGen gnomAD |
|
|
CA295693091 rs765361578 |
561 | P>S | No |
ClinGen TOPMed |
|
|
rs765570304 CA8877747 |
562 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs539490874 COSM363785 COSM320137 CA8877748 |
562 | G>R | lung [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC gnomAD |
|
rs755477005 CA401818819 |
563 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1568060703 CA401818817 |
564 | P>A | No |
ClinGen Ensembl |
|
| TCGA novel | 565 | Y>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877744 rs766551459 |
568 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1192127625 CA401818793 |
568 | D>N | No |
ClinGen gnomAD |
|
|
CA401818789 rs766551459 |
568 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1019070520 CA295693060 |
570 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8877742 rs375555518 |
571 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401818770 rs375555518 |
571 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401818764 rs1461592162 |
572 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA401818766 rs1461592162 |
572 | A>T | No |
ClinGen Ensembl |
|
|
CA8877741 VAR_048354 rs8082898 |
575 | Y>C | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA401818729 rs762178251 |
577 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762178251 CA8877740 |
577 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1400641976 CA401818710 |
579 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs138184132 CA8877739 |
580 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs768404272 CA8877738 |
581 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 585 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745342533 CA8877734 |
586 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs750553653 CA295693020 |
590 | L>S | No |
ClinGen Ensembl |
|
|
rs147018763 CA8877733 |
591 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756880758 CA8877732 |
592 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1378114067 CA401818627 |
593 | P>S | No |
ClinGen TOPMed |
|
|
CA8877731 rs746680748 |
597 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1308617532 CA401818592 |
598 | S>C | No |
ClinGen TOPMed |
|
|
CA401818576 rs1568059965 |
601 | D>A | No |
ClinGen Ensembl |
|
|
CA401818567 rs1465066855 |
602 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1427577460 CA401818570 |
602 | D>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA401818563 rs1054956720 |
603 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA295692971 rs1054956720 |
603 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs868864994 CA295692967 |
604 | G>E | No |
ClinGen Ensembl |
|
|
CA401818546 rs1255791939 |
605 | Y>F | No |
ClinGen TOPMed |
|
|
CA401818533 rs1484643463 |
607 | S>C | No |
ClinGen gnomAD |
|
|
CA8877726 rs529981219 |
610 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877727 rs529981219 |
610 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295692950 rs1051165485 |
614 | T>I | No |
ClinGen Ensembl |
|
|
CA401818491 rs1598650756 |
614 | T>P | No |
ClinGen Ensembl |
|
|
rs1598650602 CA401818482 |
615 | N>T | No |
ClinGen Ensembl |
|
|
CA8877724 rs762092790 |
616 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877723 rs762092790 |
616 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295692940 rs762092790 |
616 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 622 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA295692918 rs950152813 |
622 | Q>K | No |
ClinGen TOPMed |
|
|
CA401818423 rs1598650282 |
624 | Y>S | No |
ClinGen Ensembl |
|
|
COSM3783154 CA8877720 rs141321874 |
626 | P>L | Variant assessed as Somatic; 0.001017 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA401818401 rs1314452945 |
627 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA401818406 rs1450416324 |
627 | I>V | No |
ClinGen gnomAD |
|
|
CA8877718 rs150101312 |
628 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs150101312 CA8877719 |
628 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs745854933 CA8877717 |
628 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401818400 rs150101312 |
628 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA295692867 rs983067488 |
629 | S>L | No |
ClinGen Ensembl |
|
|
CA8877716 rs548784436 |
630 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs548784436 CA401818388 |
630 | P>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 631 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1428470228 CA401818379 |
632 | L>F | No |
ClinGen gnomAD |
|
|
CA8877714 rs746659318 |
637 | L>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240952978 CA401818342 |
638 | F>L | No |
ClinGen gnomAD |
|
|
rs777230071 CA8877713 |
639 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA401818329 rs1207148217 |
639 | I>M | No |
ClinGen TOPMed |
|
|
CA401818327 rs1252220656 |
640 | F>I | No |
ClinGen TOPMed |
|
|
rs771758610 CA401818311 |
642 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs771758610 CA8877712 |
642 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA295692838 rs969076633 |
647 | S>F | No |
ClinGen Ensembl |
|
|
CA401818274 rs1482881054 |
647 | S>T | No |
ClinGen TOPMed |
|
|
rs1203227281 CA401818253 |
648 | F>S | No |
ClinGen TOPMed |
|
|
CA8877706 rs757229978 |
650 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877705 rs757229978 |
650 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751664919 CA8877704 |
651 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs201249884 CA8877702 |
653 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877701 rs201249884 COSM1324549 |
653 | A>T | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs765056012 CA401818182 |
654 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765056012 CA8877700 |
654 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295692801 rs150922981 |
655 | T>N | No |
ClinGen ESP TOPMed |
|
|
CA401818175 rs1428728779 |
655 | T>P | No |
ClinGen TOPMed |
|
|
CA295692794 rs144002108 |
656 | L>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877699 rs144002108 |
656 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1182536824 CA401818133 |
658 | F>V | No |
ClinGen gnomAD |
|
|
CA401818117 rs1568058333 |
659 | P>L | No |
ClinGen Ensembl |
|
|
CA295692789 rs139124528 |
661 | A>T | No |
ClinGen ESP |
|
|
CA401818069 rs1404967376 |
664 | L>F | No |
ClinGen TOPMed |
|
|
rs1263338601 CA401818036 |
666 | Y>H | No |
ClinGen gnomAD |
|
|
CA401818030 rs1439944194 |
666 | Y>S | No |
ClinGen gnomAD |
|
|
CA401818022 rs1252353441 |
667 | L>V | No |
ClinGen gnomAD |
|
|
CA295692764 rs868639549 |
668 | E>K | No |
ClinGen Ensembl |
|
|
CA8877696 rs776605740 |
669 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA8877695 rs770912685 COSM989066 |
671 | A>V | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877689 rs770342786 |
672 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs780565414 CA8877691 |
672 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs780565414 CA8877690 |
672 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1216807795 CA401817937 |
673 | S>F | No |
ClinGen TOPMed |
|
|
rs781737635 CA8877687 |
674 | L>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1391239130 CA401817908 |
675 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA8877686 COSM1166326 rs371099425 |
676 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1568057807 CA401817895 |
676 | A>V | No |
ClinGen Ensembl |
|
|
rs1162409930 CA401817865 |
679 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 680 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
RCV000970334 COSM1235507 CA8877685 rs140386239 |
680 | N>S | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA8877684 rs777958730 |
681 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758517478 CA8877683 |
682 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs893718321 CA295692671 |
682 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA295692661 rs532834103 |
683 | S>N | No |
ClinGen 1000Genomes |
|
|
rs765000990 CA8877681 |
684 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs759267754 CA8877680 |
685 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs867440484 CA295692630 |
686 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 687 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877654 rs763791646 |
690 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA401816568 rs1356692232 |
691 | D>N | No |
ClinGen TOPMed |
|
|
CA401816560 rs1241677277 |
692 | S>G | No |
ClinGen TOPMed |
|
|
rs143942399 CA8877652 |
694 | R>C | Variant assessed as Somatic; 9.246e-05 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs375743953 CA8877651 |
694 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs375743953 CA401816541 |
694 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM473924 rs373780287 CA8877650 |
695 | T>M | kidney Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877648 rs772572197 |
696 | D>N | No |
ClinGen ExAC |
|
|
CA8877647 rs748182717 |
697 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs201553363 CA8877645 |
698 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs61731697 CA401816507 |
700 | D>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8877642 rs61731698 COSM280820 |
700 | D>N | large_intestine [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1338064574 CA401816505 |
701 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8877640 rs767452648 |
703 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401816489 rs1226138217 |
703 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA401816491 rs767452648 |
703 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401816486 rs751092742 |
704 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs763738775 CA8877637 |
704 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA8877638 rs751092742 |
704 | T>P | No |
ClinGen ExAC gnomAD |
|
|
CA8877635 COSM1389262 rs535892749 |
705 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs908022609 CA295689199 |
705 | A>V | No |
ClinGen TOPMed |
|
| rs983672528 | 707 | E>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 708 | S>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877621 rs149578114 |
708 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs570754096 CA295687934 |
709 | D>H | No |
ClinGen Ensembl |
|
|
rs1468867690 CA401816437 |
710 | Q>K | No |
ClinGen gnomAD |
|
|
rs751614866 CA8877618 |
711 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA401816411 rs1200138443 |
713 | D>V | No |
ClinGen gnomAD |
|
| TCGA novel | 715 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877617 COSM473923 rs777406986 |
718 | A>T | kidney [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA8877586 rs765301979 |
721 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 722 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401816309 rs1429648240 |
726 | D>G | No |
ClinGen gnomAD |
|
|
rs1419552244 CA401816300 |
727 | D>V | No |
ClinGen gnomAD |
|
|
CA401816294 rs1187801883 |
728 | L>P | No |
ClinGen gnomAD |
|
|
rs1203912524 CA401816258 |
733 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 733 | T>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1249736999 CA401816255 |
733 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA401816252 rs1182881300 |
734 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
CA401816251 rs1182881300 |
734 | N>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA8877582 rs576670651 |
736 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401816225 rs772020394 |
737 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA401816231 rs1308048815 COSM1389259 |
737 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1212944064 CA401816218 |
739 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 741 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1598526341 CA401816202 |
741 | T>P | No |
ClinGen Ensembl |
|
|
CA401816194 rs1454793235 |
742 | F>S | No |
ClinGen gnomAD |
|
|
rs778479695 CA8877578 |
742 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA8877577 rs533817943 |
745 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401816174 rs1598526177 |
745 | T>P | No |
ClinGen Ensembl |
|
|
CA295687438 rs75643723 |
746 | S>* | No |
ClinGen Ensembl |
|
| TCGA novel | 746 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1336516679 CA401816164 |
747 | T>A | No |
ClinGen gnomAD |
|
|
rs1336516679 CA401816165 |
747 | T>P | No |
ClinGen gnomAD |
|
|
rs568064312 CA8877576 |
748 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs568064312 CA401816155 |
748 | D>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8877574 rs140941017 |
751 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs140941017 CA401816140 CA295687422 |
751 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8877573 rs139317911 COSM70616 |
752 | T>M | ovary [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA401816103 rs1293929028 |
756 | E>A | No |
ClinGen TOPMed |
|
|
rs764406675 CA8877572 COSM334093 |
756 | E>K | lung [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA8877571 rs758939466 |
759 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA401816079 rs1181117662 COSM473922 |
760 | S>T | kidney Variant assessed as Somatic; 4.619e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA8877569 rs765789121 |
760 | S>Y | No |
ClinGen ExAC gnomAD |
|
|
CA401816063 rs1202360277 |
762 | S>F | No |
ClinGen gnomAD |
|
|
rs776880828 CA8877567 |
763 | P>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 764 | V>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs142982382 CA8877564 |
764 | V>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877563 rs771825571 |
765 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877562 rs748100641 |
767 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs558098862 COSM273638 CA8877560 |
768 | A>S | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM3783152 COSM3783153 CA8877559 rs558098862 |
768 | A>T | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877558 rs779592640 |
770 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 771 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1323342156 CA401816009 |
772 | D>A | No |
ClinGen gnomAD |
|
|
CA8877556 rs745587598 |
773 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA401815991 rs1426142622 |
775 | M>L | No |
ClinGen gnomAD |
|
|
rs1426142622 CA401815993 |
775 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs971731136 CA295687372 |
776 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA8877555 COSM1205397 rs778187808 |
777 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA295687368 rs1003792599 |
779 | L>P | No |
ClinGen TOPMed |
|
|
CA8877554 rs139078158 |
781 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 783 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs753109091 CA8877553 |
783 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1160677748 CA401815941 |
783 | E>K | No |
ClinGen TOPMed |
|
|
rs1598429785 CA401815919 |
784 | T>A | No |
ClinGen Ensembl |
|
|
CA401815913 rs1226274031 |
785 | K>E | No |
ClinGen gnomAD |
|
|
rs147008674 CA8877515 |
786 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs746714732 CA8877514 |
787 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs968645305 CA295683778 |
789 | G>A | No |
ClinGen Ensembl |
|
|
rs779136262 CA8877513 |
790 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1307479681 CA401815872 |
791 | K>M | No |
ClinGen gnomAD |
|
|
rs769197663 CA8877512 |
791 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1307479681 CA401815873 |
791 | K>R | No |
ClinGen gnomAD |
|
|
rs1415661230 CA401815855 |
793 | M>I | No |
ClinGen TOPMed |
|
|
CA401815859 rs1598429398 |
793 | M>T | No |
ClinGen Ensembl |
|
|
rs1382093445 CA401815862 |
793 | M>V | No |
ClinGen TOPMed |
|
|
CA401815850 rs1367534477 |
794 | D>G | No |
ClinGen gnomAD |
|
|
rs749681778 CA8877511 |
799 | F>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401815810 rs1405023207 |
800 | S>G | No |
ClinGen gnomAD |
|
|
CA8877510 rs528813862 |
801 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 803 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745916851 CA8877508 |
805 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
COSM1303780 CA8877507 rs781377051 |
806 | R>* | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877506 COSM3422239 rs771881652 COSM3422240 |
806 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751866868 CA8877505 |
807 | K>R | No |
ClinGen ExAC |
|
| TCGA novel | 807 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 810 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401815660 rs1218869838 |
812 | I>L | No |
ClinGen gnomAD |
|
|
CA401815647 rs764315053 |
813 | G>* | No |
ClinGen ExAC gnomAD |
|
|
rs764315053 CA8877504 |
813 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA8877503 rs758123868 |
813 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA8877502 rs752522968 |
814 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877501 rs765109038 |
814 | G>V | No |
ClinGen ExAC gnomAD |
|
|
rs202241333 CA8877499 |
815 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401815627 rs202241333 |
815 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877498 rs142893326 |
816 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs771853054 CA8877496 |
818 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771853054 CA8877495 |
818 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 821 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 823 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401815398 rs1349274052 |
826 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA8877474 rs770256281 |
828 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877473 rs746231466 |
829 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771374021 CA8877471 |
830 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs996237680 CA295683722 |
831 | E>G | No |
ClinGen gnomAD |
|
|
RCV000970333 rs116459026 CA8877468 |
832 | S>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA8877467 rs748435967 |
833 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA8877466 rs778665141 |
834 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401815264 rs1172989013 |
835 | I>M | No |
ClinGen TOPMed |
|
|
CA8877465 rs754740045 |
835 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877464 rs143141379 COSM1130060 |
837 | T>M | Variant assessed as Somatic; 0.0 impact. prostate [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA401815218 rs1598422513 |
838 | E>D | No |
ClinGen Ensembl |
|
|
rs1420278817 CA401815222 |
838 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA8877462 rs61736460 |
839 | P>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs151294672 CA8877460 |
841 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs568089397 CA401815175 |
842 | H>P | No |
ClinGen Ensembl |
|
|
CA401815169 rs1567971100 |
842 | H>Q | No |
ClinGen Ensembl |
|
|
CA295683719 rs568089397 |
842 | H>R | No |
ClinGen Ensembl |
|
|
rs1003134008 CA295683720 |
842 | H>Y | No |
ClinGen Ensembl |
|
|
rs578168816 CA295683718 |
843 | H>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8877458 rs578168816 |
843 | H>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs377637300 CA8877459 |
843 | H>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1033282821 CA401815151 |
844 | L>P | No |
ClinGen TOPMed |
|
|
rs1033282821 CA295683717 |
844 | L>R | No |
ClinGen TOPMed |
|
|
CA8877456 rs140230336 |
845 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs541462237 CA295683716 |
846 | L>F | No |
ClinGen 1000Genomes |
|
|
CA8877454 rs771444130 |
846 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA8877453 rs761207710 |
847 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA401815030 rs1292685812 |
853 | Q>P | No |
ClinGen gnomAD |
|
|
rs748240052 CA8877450 COSM417816 |
854 | E>K | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs146680155 CA8877449 |
855 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756117638 CA8877445 |
856 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs779756258 CA8877446 |
856 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877442 rs200113280 |
858 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200113280 CA8877441 |
858 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762564050 CA8877439 |
859 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 859 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs8096452 CA8877440 VAR_048355 RCV000957704 |
859 | E>Q | No |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs536737944 CA8877438 |
860 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1191825244 CA401814964 |
860 | E>K | No |
ClinGen TOPMed |
|
|
CA401814955 rs761154244 |
861 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761154244 CA8877436 |
861 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877437 rs139997557 |
861 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs368913981 CA8877434 |
862 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877433 rs200869858 |
862 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA401814951 rs200869858 |
862 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 864 | V>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200823240 CA8877432 |
865 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 865 | H>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs375861416 CA8877431 |
866 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877430 rs749541572 |
866 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877427 rs142911764 |
867 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877428 rs142911764 |
867 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA8877426 rs148568579 |
868 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401814914 rs1388132249 |
869 | D>G | No |
ClinGen gnomAD |
|
|
CA295683714 rs147480786 |
869 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs147480786 CA8877424 |
869 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1388202221 CA401814899 |
871 | S>F | No |
ClinGen gnomAD |
|
|
rs1292723398 CA401814897 |
872 | Y>N | No |
ClinGen gnomAD |
|
|
rs758061983 CA8877423 |
873 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758061983 CA8877422 |
873 | S>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750816947 CA8877419 |
874 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750816947 CA8877418 |
874 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877415 rs762354755 |
876 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1201152808 CA401814869 |
877 | S>R | No |
ClinGen gnomAD |
|
|
rs140662824 CA8877413 |
878 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
rs1252250033 CA401814855 |
879 | D>H | No |
ClinGen Ensembl |
|
|
CA8877411 rs775509273 |
880 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs549623795 CA8877410 |
881 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs752271497 CA295683713 |
883 | Q>P | No |
ClinGen TOPMed gnomAD |
|
|
CA401814828 rs752271497 |
883 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA401814822 rs1256064063 |
884 | P>R | No |
ClinGen gnomAD |
|
|
rs745613333 CA8877409 |
884 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA8877407 rs147247153 |
885 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401814817 rs1598419960 |
885 | A>V | No |
ClinGen Ensembl |
|
|
rs375162726 CA295683712 |
887 | T>A | No |
ClinGen ESP TOPMed |
|
| TCGA novel | 888 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 888 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1300090417 CA401814794 |
889 | I>F | No |
ClinGen gnomAD |
|
|
rs1382455128 CA401814767 |
893 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA8877406 rs746983484 |
894 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401814759 rs746983484 |
894 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401814749 rs1318338451 |
895 | S>F | No |
ClinGen gnomAD |
|
|
CA8877404 rs142853345 COSM1630612 |
898 | T>M | liver [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8877405 rs142853345 |
898 | T>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8877400 rs750763617 |
900 | G>W | No |
ClinGen ExAC gnomAD |
|
|
rs372013672 CA8877398 |
904 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 905 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA295683710 rs367962784 |
906 | G>E | No |
ClinGen ESP TOPMed |
|
|
CA401814683 rs1598419441 |
906 | G>R | No |
ClinGen Ensembl |
|
|
CA401814673 rs1351571309 |
907 | E>V | No |
ClinGen TOPMed |
|
|
rs759047959 CA8877396 |
910 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1435742555 CA401814652 |
910 | A>V | No |
ClinGen gnomAD |
|
|
rs775666304 CA8877394 |
911 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1258787985 CA401814639 |
912 | A>V | No |
ClinGen gnomAD |
|
|
rs533462490 CA8877393 |
913 | V>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1325482533 CA401814608 |
917 | E>G | No |
ClinGen gnomAD |
|
|
rs1598418992 CA401814611 |
917 | E>K | No |
ClinGen Ensembl |
|
|
CA8877390 rs372185496 |
920 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401814590 rs1228640954 |
920 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA295683707 rs372185496 COSM989059 |
920 | A>V | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA8877388 rs772077627 |
921 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA8877387 rs772077627 |
921 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1365174194 CA401814577 |
922 | A>V | No |
ClinGen TOPMed |
|
|
CA401814571 rs1470262975 |
923 | S>F | No |
ClinGen TOPMed |
|
|
rs146075320 RCV000970332 CA8877385 |
924 | R>C | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs371240117 CA8877384 |
924 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401814568 rs371240117 |
924 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA401814557 rs1337695683 |
926 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1337695683 CA401814558 |
926 | R>G | No |
ClinGen gnomAD |
|
|
rs749000237 CA401814555 |
926 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749000237 CA8877382 |
926 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751985569 CA8877379 |
929 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 930 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1471068537 CA401814520 |
931 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA401814500 rs1239600975 |
934 | I>T | No |
ClinGen gnomAD |
|
|
CA8877376 rs752797363 |
935 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA8877377 rs758996569 |
935 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877375 rs200496501 |
936 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 939 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs759817027 CA8877374 |
942 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA401814449 rs1271968787 |
942 | Q>K | No |
ClinGen gnomAD |
|
|
CA401814445 rs1227242718 |
942 | Q>R | No |
ClinGen TOPMed gnomAD |
|
| rs1567966618 | 943 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 944 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877372 rs150175125 |
947 | E>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1436444755 CA401814390 |
948 | S>Y | No |
ClinGen TOPMed |
|
|
rs61735459 CA8877356 |
950 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs61735459 CA8877357 |
950 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401814373 rs1288840928 |
951 | V>A | No |
ClinGen gnomAD |
|
|
rs755038593 CA8877354 COSM989058 |
953 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs755038593 CA401814359 |
953 | T>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs988239687 CA295683620 |
959 | G>D | No |
ClinGen TOPMed |
|
|
CA401814319 rs1351893710 |
959 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1598410721 CA401814307 |
961 | V>I | No |
ClinGen Ensembl |
|
|
CA295683619 rs956341043 |
963 | P>A | No |
ClinGen TOPMed |
|
|
CA8877350 rs750152997 |
963 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA295683617 rs570185440 |
965 | G>R | No |
ClinGen gnomAD |
|
|
rs1409101190 CA401814278 |
966 | V>G | No |
ClinGen TOPMed gnomAD |
|
|
rs571003872 CA295683616 |
966 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8877348 rs571003872 |
966 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA295683615 rs1016758548 |
968 | L>I | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 970 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1248030415 CA401814256 |
970 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1196317593 CA401814247 |
971 | S>C | No |
ClinGen gnomAD |
|
| TCGA novel | 971 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401814241 rs79592897 |
972 | T>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8877346 rs79592897 |
972 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA401814235 rs1210474794 |
973 | K>R | No |
ClinGen gnomAD |
|
|
CA295683614 rs887015258 |
974 | E>A | No |
ClinGen Ensembl |
|
|
CA401814226 rs1327054465 |
974 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA8877344 rs775033833 |
979 | H>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 980 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA8877341 rs371591392 |
981 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA401814163 rs1273252596 |
984 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA401814158 rs1347290153 |
985 | I>F | No |
ClinGen gnomAD |
|
|
rs1347290153 CA401814159 |
985 | I>V | No |
ClinGen gnomAD |
|
|
rs1157621999 CA401814143 |
987 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs138017302 CA8877339 COSM1389254 COSM3821594 |
989 | S>L | Variant assessed as Somatic; 0.0 impact. large_intestine breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA401814094 rs145834920 |
993 | D>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA8877312 rs145834920 COSM1180192 |
993 | D>N | prostate [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA8877313 rs145834920 |
993 | D>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144613208 CA8877310 |
997 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1012123253 CA401814070 COSM709332 |
997 | D>N | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1012123253 CA295683550 |
997 | D>Y | No |
ClinGen TOPMed |
|
|
rs1276972401 CA401814064 |
998 | L>V | No |
ClinGen gnomAD |
|
|
CA8877309 rs748976507 |
999 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1001 | G>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
COSM3355995 CA8877306 rs758321771 COSM989056 |
1002 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1003 | L>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1420941144 CA401814027 |
1004 | M>K | No |
ClinGen TOPMed |
|
|
CA401814018 rs1567958595 |
1005 | S>N | No |
ClinGen Ensembl |
|
|
CA8877304 rs765087190 |
1008 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1300561636 CA401813995 |
1008 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1418880435 CA401813991 |
1009 | I>N | No |
ClinGen TOPMed |
|
|
rs1309416955 CA401813979 |
1011 | S>A | No |
ClinGen gnomAD |
|
|
CA401813967 rs1598404068 |
1013 | T>P | No |
ClinGen Ensembl |
|
|
rs1213634442 CA401813956 |
1014 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA8877301 rs766104072 |
1015 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs918389975 CA295683547 |
1015 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
rs760444006 CA8877300 |
1018 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1567958145 CA401813931 |
1019 | T>A | No |
ClinGen Ensembl |
|
|
CA8877299 rs527461275 |
1020 | T>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA8877298 rs527461275 COSM989054 |
1020 | T>M | Variant assessed as Somatic; 0.0 impact. oesophagus endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA401813923 rs527461275 |
1020 | T>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA401813919 rs1187155965 |
1021 | H>L | No |
ClinGen gnomAD |
|
|
CA401813913 rs1310640322 |
1022 | I>V | No |
ClinGen TOPMed |
|
|
rs745939800 CA8877294 |
1024 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401813873 rs1278805379 |
1026 | V>M | No |
ClinGen TOPMed |
|
|
rs747949084 CA8877269 |
1028 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1390826799 CA401813855 |
1029 | G>S | No |
ClinGen gnomAD |
|
|
CA401813850 rs1156862058 |
1029 | G>V | No |
ClinGen gnomAD |
|
| TCGA novel | 1034 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA401813820 rs1181198672 |
1034 | R>K | No |
ClinGen TOPMed |
|
|
CA295683505 rs150071835 |
1035 | I>T | No |
ClinGen ESP |
|
|
CA401813790 rs754937234 |
1038 | R>L | No |
ClinGen ExAC gnomAD |
|
|
CA8877267 rs754937234 |
1038 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA8877266 rs140548684 |
1041 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147930423 COSM1480389 CA8877265 |
1042 | T>M | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA295683504 rs967743121 |
1047 | I>F | No |
ClinGen TOPMed |
|
|
rs368752856 CA8877263 |
1047 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767256031 CA8877262 |
1049 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA295683503 rs1802388 |
1049 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA401813721 rs1598398950 |
1049 | H>R | No |
ClinGen Ensembl |
|
|
CA401813712 rs1246667840 |
1050 | D>E | No |
ClinGen gnomAD |
|
|
CA295683502 rs1020291039 |
1051 | Q>H | No |
ClinGen Ensembl |
|
|
CA8877235 rs767551000 |
1052 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA8877234 rs761964315 |
1052 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1473912557 CA401813683 |
1054 | A>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1473912557 CA401813681 |
1054 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA8877231 rs201592629 |
1055 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1205575308 CA401813651 |
1058 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA401813640 rs775465251 |
1060 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775465251 CA8877230 |
1060 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs190875358 CA295683481 |
1065 | P>H | No |
ClinGen 1000Genomes |
|
|
CA401813585 rs1265305117 |
1067 | M>I | No |
ClinGen TOPMed |
|
|
rs1246184069 CA401813591 |
1067 | M>L | No |
ClinGen TOPMed |
|
|
rs1246184069 CA401813590 |
1067 | M>V | No |
ClinGen TOPMed |
|
|
CA401813580 rs1293905362 |
1068 | S>A | No |
ClinGen gnomAD |
|
|
rs778843417 CA295683480 |
1069 | V>M | No |
ClinGen Ensembl |
|
|
rs1357829287 CA401813569 |
1070 | T>S | No |
ClinGen TOPMed |
|
|
rs1167609771 CA401813553 |
1072 | V>A | No |
ClinGen Ensembl |
|
|
rs769851322 CA8877228 |
1072 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs781206421 CA8877227 |
1073 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA8877226 rs781206421 |
1073 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1231409113 CA401813539 |
1075 | H>Y | No |
ClinGen gnomAD |
|
|
CA401813500 rs1289116363 |
1080 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA401813495 rs1411880414 |
1081 | T>S | No |
ClinGen gnomAD |
|
|
CA8877223 rs777246251 |
1083 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1598395088 CA401813470 |
1084 | D>E | No |
ClinGen Ensembl |
|
|
rs1328445643 CA401813464 |
1085 | G>E | No |
ClinGen gnomAD |
|
|
rs780460761 CA8877220 |
1086 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780460761 CA8877221 |
1086 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877222 rs780460761 |
1086 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA8877217 rs140830660 |
1087 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199616331 CA8877219 |
1087 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA8877216 rs761758415 |
1088 | D>W | No |
ClinGen ExAC gnomAD |
No associated diseases with Q9Y2J2
11 regional properties for Q9Y2J2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | FERM domain | 110 - 391 | IPR000299 |
| domain | SAB domain | 719 - 765 | IPR007477 |
| domain | Band 4.1, C-terminal | 973 - 1079 | IPR008379 |
| domain | FERM adjacent | 397 - 443 | IPR014847 |
| domain | FERM, N-terminal | 114 - 176 | IPR018979 |
| domain | FERM, C-terminal PH-like domain | 305 - 395 | IPR018980 |
| conserved_site | FERM conserved site | 164 - 192 | IPR019747-1 |
| conserved_site | FERM conserved site | 271 - 300 | IPR019747-2 |
| domain | FERM central domain | 194 - 301 | IPR019748 |
| domain | Band 4.1 domain | 106 - 301 | IPR019749 |
| domain | Band 4.1-like protein 3, FERM domain, F1 sub-domain | 109 - 192 | IPR030691 |
Functions
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell junction | A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. |
| cell-cell junction | A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects. |
| cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| juxtaparanode region of axon | A region of an axon near a node of Ranvier that is between the paranode and internode regions. |
| paranode region of axon | An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| actin binding | Binding to monomeric or multimeric forms of actin, including actin filaments. |
| cytoskeletal protein-membrane anchor activity | The binding activity of a molecule that brings together a cytoskeletal protein or protein complex and a plasma membrane lipid or membrane-associated protein, in order to maintain the localization of the cytoskeleton at a specific cortical membrane location. |
| structural constituent of cytoskeleton | The action of a molecule that contributes to the structural integrity of a cytoskeletal structure. |
12 GO annotations of biological process
| Name | Definition |
|---|---|
| actomyosin structure organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. |
| apoptotic process | A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. |
| cortical actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane. |
| cortical cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane. |
| myelin maintenance | The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath. |
| neuron projection morphogenesis | The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites. |
| paranodal junction assembly | Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier. |
| protein localization to juxtaparanode region of axon | Any process in which a protein is transported to, or maintained at, the juxtaparanode region of an axon. |
| protein localization to paranode region of axon | A cellular protein localization process in which a protein is transported to, or maintained at, the paranode region of an axon. |
| protein localization to plasma membrane | A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. |
| regulation of cell growth | Any process that modulates the frequency, rate, extent or direction of cell growth. |
| regulation of cell shape | Any process that modulates the surface configuration of a cell. |
13 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9N179 | EPB41 | Protein 4.1 | Bos taurus (Bovine) | PR |
| Q9HCM4 | EPB41L5 | Band 4.1-like protein 5 | Homo sapiens (Human) | PR |
| Q9HCS5 | EPB41L4A | Band 4.1-like protein 4A | Homo sapiens (Human) | PR |
| Q7Z6J6 | FRMD5 | FERM domain-containing protein 5 | Homo sapiens (Human) | PR |
| A2A2Y4 | FRMD3 | FERM domain-containing protein 3 | Homo sapiens (Human) | PR |
| O43491 | EPB41L2 | Band 4.1-like protein 2 | Homo sapiens (Human) | PR |
| Q9H4G0 | EPB41L1 | Band 4.1-like protein 1 | Homo sapiens (Human) | PR |
| P11171 | EPB41 | Protein 4.1 | Homo sapiens (Human) | PR |
| Q9Z2H5 | Epb41l1 | Band 4.1-like protein 1 | Mus musculus (Mouse) | PR |
| P48193 | Epb41 | Protein 4.1 | Mus musculus (Mouse) | PR |
| O70318 | Epb41l2 | Band 4.1-like protein 2 | Mus musculus (Mouse) | PR |
| Q9WV92 | Epb41l3 | Band 4.1-like protein 3 | Mus musculus (Mouse) | PR |
| Q9WTP0 | Epb41l1 | Band 4.1-like protein 1 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTTESGSDSE | SKPDQEAEPQ | EAAGAQGRAG | APVPEPPKEE | QQQALEQFAA | AAAHSTPVRR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EVTDKEQEFA | ARAAKQLEYQ | QLEDDKLSQK | SSSSKLSRSP | LKIVKKPKSM | QCKVILLDGS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EYTCDVEKRS | RGQVLFDKVC | EHLNLLEKDY | FGLTYRDAEN | QKNWLDPAKE | IKKQVRSGAW |
| 190 | 200 | 210 | 220 | 230 | 240 |
| HFSFNVKFYP | PDPAQLSEDI | TRYYLCLQLR | DDIVSGRLPC | SFVTLALLGS | YTVQSELGDY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| DPDECGSDYI | SEFRFAPNHT | KELEDKVIEL | HKSHRGMTPA | EAEMHFLENA | KKLSMYGVDL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| HHAKDSEGVE | IMLGVCASGL | LIYRDRLRIN | RFAWPKVLKI | SYKRNNFYIK | IRPGEFEQFE |
| 370 | 380 | 390 | 400 | 410 | 420 |
| STIGFKLPNH | RAAKRLWKVC | VEHHTFFRLL | LPEAPPKKFL | TLGSKFRYSG | RTQAQTRRAS |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ALIDRPAPYF | ERSSSKRYTM | SRSLDGEVGT | GQYATTKGIS | QTNLITTVTP | EKKAEEERDE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EEDKRRKGEE | VTPISAIRHE | GKSPGLGTDS | CPLSPPSTHC | APTSPTELRR | RCKENDCKLP |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GYEPSRAEHL | PGEPALDSDG | PGRPYLGDQD | VAFSYRQQTG | KGTTLFSFSL | QLPESFPSLL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| DDDGYLSFPN | LSETNLLPQS | LQHYLPIRSP | SLVPCFLFIF | FFLLSASFSV | PYALTLSFPL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| ALCLCYLEPK | AASLSASLDN | DPSDSSEEET | DSERTDTAAD | GETTATESDQ | EEDAELKAQE |
| 730 | 740 | 750 | 760 | 770 | 780 |
| LEKTQDDLMK | HQTNISELKR | TFLETSTDTA | VTNEWEKRLS | TSPVRLAARQ | EDAPMIEPLV |
| 790 | 800 | 810 | 820 | 830 | 840 |
| PEETKQSSGE | KLMDGSEIFS | LLESARKPTE | FIGGVTSTSQ | SWVQKMETKT | ESSGIETEPT |
| 850 | 860 | 870 | 880 | 890 | 900 |
| VHHLPLSTEK | VVQETVLVEE | RRVVHASGDA | SYSAGDSGDA | AAQPAFTGIK | GKEGSALTEG |
| 910 | 920 | 930 | 940 | 950 | 960 |
| AKEEGGEEVA | KAVLEQEETA | AASRERQEEQ | SAAIHISETL | EQKPHFESST | VKTETISFGS |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| VSPGGVKLEI | STKEVPVVHT | ETKTITYESS | QVDPGTDLEP | GVLMSAQTIT | SETTSTTTTT |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| HITKTVKGGI | SETRIEKRIV | ITGDADIDHD | QALAQAIKEA | KEQHPDMSVT | KVVVHKETEI |
| TPEDGED |