P11171
Gene name |
EPB41 |
Protein name |
Protein 4.1 |
Names |
P4.1, 4.1R, Band 4.1, EPB4.1, Erythrocyte membrane protein band 4.1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:2035 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
4 structures for P11171
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1GG3 | X-ray | 280 A | A/B/C | 210-488 | PDB |
| 2RQ1 | NMR | - | A | 292-396 | PDB |
| 3QIJ | X-ray | 180 A | A/B | 211-488 | PDB |
| AF-P11171-F1 | Predicted | AlphaFoldDB |
617 variants for P11171
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV000018196 rs121434564 CA126837 |
210 | M>R | Elliptocytosis 1 (el1) Elliptocytosis 1 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
CA126839 rs121434564 RCV000018198 |
210 | M>T | Elliptocytosis 1 (el1) Elliptocytosis 1 [Ensembl, ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001001476 CA724256 RCV002068772 VAR_009122 rs111642750 |
214 | V>I | Elliptocytosis 1 [ClinVar] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000756086 RCV001000001 rs142874233 CA724353 RCV001702555 |
291 | P>S | Elliptocytosis 1 [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs869025285 RCV000207065 |
358 | N>missing | Hereditary elliptocytosis [ClinVar] | Yes |
ClinVar dbSNP |
|
rs201227668 CA724442 RCV001001332 RCV002549160 |
396 | Y>C | Inborn genetic diseases Elliptocytosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001001154 CA339526849 rs1302220038 |
674 | S>N | Elliptocytosis 1 [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000709877 CA724720 rs199764020 |
683 | A>P | Elliptocytosis 1 [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA724141 rs775614973 |
2 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339522374 rs1266252891 |
3 | T>A | No |
ClinGen gnomAD |
|
|
CA339522384 rs1571990233 |
4 | E>K | No |
ClinGen Ensembl |
|
|
rs747044928 CA724142 |
5 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA724143 rs769782245 |
6 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA339522418 rs1270441727 |
6 | S>N | No |
ClinGen gnomAD |
|
|
rs553290396 CA724144 |
6 | S>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs557999037 CA339522432 |
7 | L>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA724145 rs557999037 |
7 | L>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 12 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724150 rs767272040 |
12 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724153 rs764697267 |
18 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs563367649 CA20012563 |
19 | K>E | No |
ClinGen gnomAD |
|
|
CA724154 rs754254259 |
23 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724155 rs75644629 |
24 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA339522567 rs1211648633 |
25 | A>T | No |
ClinGen TOPMed |
|
|
CA339522577 rs1271522320 |
26 | I>T | No |
ClinGen TOPMed |
|
|
rs1437710002 CA339522583 |
27 | N>T | No |
ClinGen TOPMed |
|
|
rs779290705 CA724156 |
28 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs1179622435 CA339522596 |
29 | G>D | No |
ClinGen gnomAD |
|
|
rs758679104 CA339522605 |
30 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724157 rs746228764 |
30 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs780189990 CA724159 |
31 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339522637 rs1311749129 |
34 | Q>R | No |
ClinGen Ensembl |
|
|
CA339522659 rs1557922459 |
36 | E>G | No |
ClinGen Ensembl |
|
|
CA339522667 rs1457369414 |
37 | E>K | No |
ClinGen gnomAD |
|
|
rs768577854 CA724162 |
38 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA724161 rs768577854 |
38 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs749229606 CA724163 |
40 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs146663694 CA339522727 |
40 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 41 | T>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 45 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339522808 rs1250588160 |
46 | D>Y | No |
ClinGen gnomAD |
|
|
rs529527082 CA20012650 |
49 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
CA20012651 rs992560065 |
52 | K>M | No |
ClinGen Ensembl |
|
|
rs1366704991 CA339522918 |
55 | A>V | No |
ClinGen gnomAD |
|
|
rs1163625664 CA339522926 |
56 | S>F | No |
ClinGen gnomAD |
|
|
rs774967538 CA724168 |
57 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1370148720 CA339522936 |
58 | G>E | No |
ClinGen gnomAD |
|
|
CA724169 rs144499540 |
58 | G>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs112485703 CA20012686 |
61 | P>R | No |
ClinGen gnomAD |
|
|
rs753358508 CA724171 |
61 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1244653785 CA339522959 |
62 | T>A | No |
ClinGen gnomAD |
|
|
CA339522966 rs765720886 |
63 | H>P | No |
ClinGen ExAC gnomAD |
|
|
CA339522968 rs1226612943 |
63 | H>Q | No |
ClinGen gnomAD |
|
|
rs765720886 CA724173 |
63 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA724172 rs762296033 |
63 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA339522992 rs1483171641 |
67 | T>P | No |
ClinGen gnomAD |
|
|
rs1416228132 CA339522996 |
67 | T>S | No |
ClinGen Ensembl |
|
|
CA724174 rs750798558 |
68 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1253375211 CA339523017 |
70 | K>R | No |
ClinGen gnomAD |
|
|
CA20012729 rs111957024 |
71 | E>G | No |
ClinGen Ensembl |
|
|
rs758693504 CA724175 |
71 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs200653172 CA724177 |
72 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA724176 rs780285029 |
72 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724178 rs755201001 |
73 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA724179 rs374334401 |
74 | S>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA20012784 rs958331290 |
75 | E>* | No |
ClinGen TOPMed |
|
|
rs748251899 CA724180 |
76 | S>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 76 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724182 rs771047706 |
76 | S>R | No |
ClinGen ExAC |
|
|
CA724184 rs368272153 |
78 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339523064 rs368272153 |
78 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 79 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339523066 rs1400100252 |
79 | L>V | No |
ClinGen gnomAD |
|
|
rs942222753 CA20012818 |
80 | S>A | No |
ClinGen gnomAD |
|
|
rs745691212 CA724185 |
80 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs942222753 CA339523072 |
80 | S>P | No |
ClinGen gnomAD |
|
|
rs372209786 CA724186 |
81 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372209786 CA339523075 |
81 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA724187 rs775337140 |
81 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1342438360 CA339523081 |
82 | L>P | No |
ClinGen gnomAD |
|
|
rs1557924695 CA339523087 |
83 | F>S | No |
ClinGen Ensembl |
|
| rs752062682 | 85 | S>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724192 rs561329874 |
85 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA724191 rs776065288 |
85 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs997944985 CA20012874 |
87 | L>F | No |
ClinGen Ensembl |
|
|
CA724194 rs141680585 |
88 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763330269 CA724195 |
92 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766702018 CA724196 |
93 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA724197 rs751918017 |
94 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs781461033 CA339523165 |
96 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724199 rs781461033 |
96 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724200 rs752730549 |
99 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 103 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs560164744 CA724201 |
108 | K>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339523260 rs1372037096 |
109 | G>S | No |
ClinGen TOPMed |
|
|
CA339523282 rs369294048 |
112 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA724202 rs779019847 |
112 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA724203 rs369294048 |
112 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1384249340 CA339523289 |
113 | Q>H | No |
ClinGen gnomAD |
|
|
rs201345838 CA724204 |
113 | Q>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339523312 rs1433887568 |
116 | I>R | No |
ClinGen TOPMed |
|
|
rs1373483499 CA339523308 |
116 | I>V | No |
ClinGen TOPMed |
|
| TCGA novel | 117 | E>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339523326 rs140065972 |
118 | F>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs140065972 CA724205 |
118 | F>Y | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs992883620 CA20012979 |
120 | T>I | No |
ClinGen Ensembl |
|
|
CA339523377 rs985496985 |
125 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs371403877 CA724206 |
126 | I>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1341618 rs1327041961 CA339523385 |
127 | I>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA724208 rs776279425 |
132 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339523424 rs1486748838 |
133 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 135 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200186018 CA724209 |
137 | P>L | No |
ClinGen ESP TOPMed |
|
|
CA339523454 rs200186018 |
137 | P>Q | No |
ClinGen ESP TOPMed |
|
|
CA724212 rs769244959 |
138 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA724213 rs772686614 |
139 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA339523472 rs1256912322 |
140 | K>R | No |
ClinGen TOPMed |
|
|
rs745437081 CA20013045 |
141 | T>A | No |
ClinGen Ensembl |
|
|
CA724214 rs369976028 |
141 | T>R | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1431488367 CA339523481 |
142 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1471909530 CA339523507 |
143 | P>L | No |
ClinGen gnomAD |
|
|
rs1159134627 CA339523520 |
144 | S>F | No |
ClinGen gnomAD |
|
|
CA724215 rs766900734 |
146 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs1455732889 CA339523558 |
147 | L>P | No |
ClinGen gnomAD |
|
|
rs1292131133 CA339523570 |
148 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 149 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724216 rs774634104 |
149 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA20013068 rs897659215 |
151 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA20013075 rs929146973 |
154 | E>K | No |
ClinGen TOPMed |
|
|
rs1464962949 CA339523657 |
155 | T>A | No |
ClinGen TOPMed |
|
|
rs1046166710 CA20013076 |
156 | Q>H | No |
ClinGen TOPMed |
|
|
CA339523675 rs1288985928 |
156 | Q>R | No |
ClinGen gnomAD |
|
|
rs1279044954 CA339524121 |
161 | E>A | No |
ClinGen TOPMed |
|
|
rs775969811 CA724237 |
163 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA20017385 rs147738349 |
163 | R>K | No |
ClinGen ESP gnomAD |
|
|
rs1443271634 CA339524170 |
165 | D>E | No |
ClinGen TOPMed |
|
|
CA724238 rs573494559 |
169 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724241 rs753982388 |
174 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA724240 rs201231112 |
174 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA724242 rs757297069 |
177 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724243 rs766257622 |
178 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1477311995 CA339524338 |
179 | C>R | No |
ClinGen TOPMed |
|
|
CA724244 rs751463925 |
179 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA339524363 rs1572089649 |
180 | S>F | No |
ClinGen Ensembl |
|
|
rs754849107 CA724245 |
180 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA20017486 rs557047271 |
181 | K>N | No |
ClinGen 1000Genomes |
|
|
rs866071277 CA20017499 |
182 | I>V | No |
ClinGen gnomAD |
|
|
CA339524388 rs1367992922 |
184 | V>E | No |
ClinGen gnomAD |
|
|
CA724248 rs747929575 |
185 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA20017519 rs747929575 |
185 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339524418 rs1227888963 |
188 | S>T | No |
ClinGen gnomAD |
|
|
rs755818196 CA724249 |
193 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1309381471 CA339524449 |
193 | A>T | No |
ClinGen gnomAD |
|
|
CA339524463 rs1462111996 |
195 | T>A | No |
ClinGen gnomAD |
|
|
CA724250 rs777346153 |
195 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1448522355 CA339524479 |
197 | L>* | No |
ClinGen gnomAD |
|
|
CA20017536 rs866390552 |
199 | A>S | No |
ClinGen Ensembl |
|
|
CA20017538 rs1032686907 |
201 | Q>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 202 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1421163532 CA339524528 |
204 | I>M | No |
ClinGen gnomAD |
|
|
CA339524527 rs1572090504 |
204 | I>S | No |
ClinGen Ensembl |
|
| TCGA novel | 207 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339524545 rs1297054765 |
207 | H>Y | No |
ClinGen TOPMed |
|
|
rs778268635 CA724253 |
210 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1557948192 CA339524568 RCV000756088 |
210 | M>V | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA339524575 rs1470876044 |
211 | H>Y | No |
ClinGen gnomAD |
|
|
rs746430671 CA724254 |
212 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339524596 rs111642750 |
214 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA339524597 RCV000520520 rs111642750 |
214 | V>L | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs761064131 CA724257 |
216 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA724258 rs769005503 |
218 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs776954685 CA724259 |
220 | T>A | No |
ClinGen ExAC |
|
|
CA724260 rs148968117 |
221 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs148968117 CA339524641 |
221 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1557948590 RCV000760835 CA339524652 |
222 | Y>* | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
rs1262516372 CA339524671 |
225 | V>F | No |
ClinGen gnomAD |
|
|
CA724262 rs750437420 |
227 | E>K | No |
ClinGen ExAC TOPMed |
|
|
rs752588508 CA724288 |
229 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1253600912 CA339525243 |
231 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA339525329 rs1160118901 |
238 | R>* | No |
ClinGen TOPMed gnomAD |
|
|
CA20020457 rs1024379477 |
238 | R>Q | No |
ClinGen Ensembl |
|
|
rs763919964 CA339525333 |
239 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763919964 CA724290 |
239 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724293 rs373464494 |
244 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339525411 rs1306196755 |
245 | L>H | No |
ClinGen gnomAD |
|
| TCGA novel | 245 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1557964224 CA339525428 |
247 | E>Q | No |
ClinGen Ensembl |
|
|
rs1557964296 CA339525450 |
248 | E>D | No |
ClinGen Ensembl |
|
|
rs757942511 CA724295 |
251 | F>L | No |
ClinGen ExAC |
|
|
rs780730982 CA724296 |
252 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 254 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747566443 CA724297 |
254 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs552908580 CA20020495 |
255 | I>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs552908580 CA724298 |
255 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1292131846 CA339525577 |
257 | D>N | No |
ClinGen gnomAD |
|
|
CA724300 rs566540981 |
259 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA724301 rs770064316 |
260 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724302 rs751877537 |
260 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339525627 rs770064316 |
260 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724303 rs749414197 |
261 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 261 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA20020523 rs773706226 |
262 | K>T | No |
ClinGen Ensembl |
|
|
rs756390517 CA724319 |
264 | W>L | No |
ClinGen ExAC gnomAD |
|
|
CA724320 rs778075450 |
267 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA724321 rs749554752 |
268 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA20028665 rs948568901 |
268 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 270 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1244699038 CA339526752 |
271 | I>V | No |
ClinGen gnomAD |
|
|
rs200635934 CA724325 |
275 | V>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs745890106 CA724324 |
275 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs144897337 CA724326 |
276 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV000756087 CA724327 rs141150801 |
276 | R>H | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA724343 rs745982851 |
277 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA339526836 rs745982851 |
277 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA339526847 rs1572494662 |
278 | V>A | No |
ClinGen Ensembl |
|
|
rs137895267 CA724344 |
278 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA724345 rs780163558 |
279 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs189183599 CA724346 |
283 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769763668 CA724347 |
285 | N>I | No |
ClinGen ExAC gnomAD |
|
|
CA724348 rs773195319 |
285 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs770712506 CA724350 |
286 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724349 rs762774480 |
286 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs774106664 CA724351 |
289 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1051352050 CA20030461 COSM459341 |
290 | P>A | cervix Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs752248955 CA724354 |
293 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA339527072 rs531853845 |
295 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA724355 rs531853845 |
295 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs764604472 CA724356 |
296 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339527099 rs1200214065 |
297 | T>A | No |
ClinGen gnomAD |
|
|
rs371977238 CA724357 |
299 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA20030481 rs371977238 |
299 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339527151 rs1470445922 |
300 | I>M | No |
ClinGen gnomAD |
|
|
rs1158872648 CA339527169 |
302 | R>K | No |
ClinGen gnomAD |
|
|
CA339527543 rs1275817455 |
306 | C>R | No |
ClinGen TOPMed |
|
|
rs1164958219 CA339527554 |
307 | L>F | No |
ClinGen gnomAD |
|
| TCGA novel | 308 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1350454637 CA339527568 |
308 | Q>R | No |
ClinGen TOPMed |
|
|
rs577850620 CA724379 |
310 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA724378 rs754298443 |
310 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374995778 CA724380 |
311 | Q>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1558038142 CA339527599 |
311 | Q>H | No |
ClinGen Ensembl |
|
|
CA724381 rs750784399 |
312 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA724382 rs758603245 |
313 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1572541260 CA339527631 |
314 | V>A | No |
ClinGen Ensembl |
|
|
rs1382345019 CA339527648 |
316 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA20031725 rs1045898158 |
317 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs930855572 CA20031730 |
317 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs201581355 CA724384 |
322 | F>S | No |
ClinGen ExAC TOPMed |
|
|
rs777874461 CA724386 |
329 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs199529393 CA20031741 |
330 | S>T | No |
ClinGen Ensembl |
|
|
rs749285989 CA724387 |
331 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA339527792 rs1182166272 |
331 | Y>H | No |
ClinGen gnomAD |
|
|
rs1003754570 CA20031764 |
332 | T>A | No |
ClinGen Ensembl |
|
|
CA339527806 rs1445596955 |
332 | T>I | No |
ClinGen gnomAD |
|
|
rs191605374 CA20031774 |
333 | I>M | No |
ClinGen 1000Genomes |
|
|
rs757227176 CA724388 |
334 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs368085650 CA20031786 |
337 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1558038953 CA339527865 |
338 | G>E | No |
ClinGen Ensembl |
|
|
rs371981251 CA724393 |
338 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1468128146 CA339527887 |
340 | Y>C | No |
ClinGen gnomAD |
|
|
rs768208143 CA724394 |
342 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA724395 rs776091034 |
345 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724397 rs182542991 |
347 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1480956966 CA339528006 |
351 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA339528061 rs1201908987 |
356 | A>P | No |
ClinGen gnomAD |
|
|
CA724398 rs202197419 |
357 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA724399 COSM426041 rs202197419 |
357 | P>R | Variant assessed as Somatic; 0.0 impact. endometrium breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1472336034 CA339528079 |
358 | N>H | No |
ClinGen gnomAD |
|
|
rs751756531 CA724401 |
358 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA339528130 rs1240018529 |
363 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA339528128 rs1240018529 |
363 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs143958458 CA724403 |
365 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA724405 rs200261627 |
368 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1558039733 CA339528196 |
368 | M>T | No |
ClinGen Ensembl |
|
|
CA724406 rs778928272 |
371 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1054714853 CA20031921 |
373 | S>T | No |
ClinGen Ensembl |
|
|
rs1572543871 CA339528262 |
374 | Y>F | No |
ClinGen Ensembl |
|
|
rs1470866334 CA339528267 |
375 | R>G | No |
ClinGen gnomAD |
|
|
rs769241133 CA724432 |
376 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA724434 rs749840637 |
381 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
rs933837968 CA20038633 |
382 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs544599235 CA724436 |
383 | D>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1558079958 CA339529425 |
385 | E>Q | No |
ClinGen Ensembl |
|
|
CA724438 rs772457091 |
386 | F>C | No |
ClinGen ExAC gnomAD |
|
|
CA724440 rs775806350 |
389 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA20038683 rs763592031 |
390 | A>S | No |
ClinGen Ensembl |
|
|
rs1422935489 CA339529524 |
393 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA339529538 rs1265344206 |
395 | M>K | No |
ClinGen gnomAD |
|
|
CA724441 rs148784877 |
395 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1558080333 CA339529575 |
398 | V>G | No |
ClinGen Ensembl |
|
|
CA20038687 rs907539956 |
399 | D>E | No |
ClinGen Ensembl |
|
|
CA724444 rs763007073 |
401 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA724463 rs776789017 |
408 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA724462 rs371379818 RCV000756089 |
408 | G>R | No |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
|
CA724464 rs181358360 |
409 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA724465 rs150835844 |
410 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA724466 rs774220882 |
411 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs759443710 CA339522007 |
412 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs745409760 CA20001513 |
412 | I>N | No |
ClinGen Ensembl |
|
|
rs767339169 CA339522009 |
413 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752484360 CA724470 |
414 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752484360 CA724469 |
414 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763594018 CA724471 |
416 | C>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 416 | C>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339522024 rs1372526025 |
416 | C>S | No |
ClinGen gnomAD |
|
|
rs753421833 CA724472 |
420 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1244190144 CA339522075 |
424 | K>Q | No |
ClinGen TOPMed |
|
|
rs756675893 CA724473 |
425 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs563336446 CA724474 |
426 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1337732103 CA339522096 |
426 | K>N | No |
ClinGen gnomAD |
|
|
rs746417923 CA724475 |
431 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs758973086 CA724476 |
431 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724477 rs758973086 |
431 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339522138 rs1230535910 |
433 | P>S | No |
ClinGen TOPMed |
|
|
rs776673740 CA724480 |
434 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724481 rs748280138 |
439 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769809335 CA724482 |
440 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs769809335 CA20001565 |
440 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs529053932 CA20001574 |
443 | K>E | No |
ClinGen 1000Genomes |
|
|
rs773241645 CA724483 |
444 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA724484 rs374316682 |
444 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs74931541 CA724485 |
445 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 446 | S>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760348644 CA724487 |
448 | F>S | No |
ClinGen ExAC |
|
|
CA724486 rs775275607 |
448 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs763832384 CA724488 |
450 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs1267390062 CA339522255 |
450 | K>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 450 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724490 rs146566071 |
452 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs199751917 CA724489 |
452 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339522272 rs1418786015 |
454 | G>R | No |
ClinGen TOPMed |
|
|
CA339522282 rs1452035407 |
455 | E>G | No |
ClinGen gnomAD |
|
|
rs776481551 CA724507 |
456 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA724508 rs761433669 |
457 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761433669 CA724509 |
457 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749960179 CA724510 |
459 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs932565060 CA20003190 |
462 | T>I | No |
ClinGen Ensembl |
|
|
CA339522366 rs1307395143 |
463 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1377959608 CA339522368 |
464 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs767012665 CA724512 |
465 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 467 | L>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs981043937 CA20003194 COSM3804890 |
471 | R>Q | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1358895284 CA339522655 |
472 | A>T | No |
ClinGen gnomAD |
|
|
rs200826045 CA724516 |
481 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777903844 CA724518 |
485 | T>M | No |
ClinGen ExAC gnomAD |
|
|
CA724538 rs778090351 |
492 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754100044 CA724539 |
494 | T>S | No |
ClinGen ExAC gnomAD |
|
|
CA724540 rs757468910 |
495 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA339523617 rs1468046691 |
498 | S>N | No |
ClinGen gnomAD |
|
|
rs778918981 CA724541 |
501 | L>I | No |
ClinGen ExAC gnomAD |
|
|
CA339523671 rs1244810012 |
502 | A>T | No |
ClinGen TOPMed |
|
|
rs745905322 CA724542 |
502 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA724544 rs781148724 |
504 | G>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 506 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724548 rs749013479 |
508 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA916139914 rs1558114194 |
509 | Y>* | No |
ClinGen Ensembl |
|
| TCGA novel | 509 | Y>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs148913273 CA20006278 |
510 | S>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA724550 rs773745988 |
512 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724549 rs375615372 |
512 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767940050 CA724552 |
515 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA724555 rs369713323 CA724556 |
521 | S>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs969632135 CA20006393 |
524 | I>N | No |
ClinGen Ensembl |
|
|
rs1002575760 CA20006395 |
527 | P>R | No |
ClinGen Ensembl |
|
|
rs1173509870 CA339523840 |
527 | P>S | No |
ClinGen TOPMed |
|
|
CA339523838 rs1173509870 |
527 | P>T | No |
ClinGen TOPMed |
|
|
CA339523850 rs1225032170 |
529 | P>A | No |
ClinGen Ensembl |
|
|
CA20006403 rs779972883 |
531 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1178588215 CA339523870 |
532 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 533 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs372946232 COSM908015 CA724562 |
533 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1365976907 CA339523887 |
534 | T>I | No |
ClinGen TOPMed |
|
|
rs777766082 CA724564 |
535 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs147988617 CA724563 |
535 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749032128 CA724565 |
538 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs745781158 CA339523910 |
538 | R>W | No |
ClinGen Ensembl |
|
|
CA724566 rs770492941 |
539 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs567821678 CA20006472 |
540 | S>F | No |
ClinGen 1000Genomes |
|
|
rs1315887859 CA339523924 |
541 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs771654360 CA724569 |
541 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774976688 CA724570 |
542 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA339523933 rs1287476127 |
542 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA724572 rs764529445 |
544 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA339523941 rs764529445 |
544 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs972213355 CA20006549 |
545 | G>R | No |
ClinGen Ensembl |
|
|
rs528436937 CA724587 |
546 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771612933 CA724588 |
547 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746453289 CA724590 |
550 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs537037014 CA724591 COSM908017 |
551 | S>L | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
rs762208100 CA724593 |
552 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724595 rs377642732 |
553 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs377642732 CA724594 |
553 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs556816482 CA339525638 |
554 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA724596 rs556816482 |
554 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1407526030 CA339525669 |
556 | P>L | No |
ClinGen gnomAD |
|
|
rs766647770 CA724598 |
557 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA724600 rs201952060 |
557 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs766647770 CA724597 |
557 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA20017352 rs770445749 |
558 | P>L | No |
ClinGen Ensembl |
|
|
CA339525674 rs1406231942 |
558 | P>S | No |
ClinGen gnomAD |
|
|
rs1333019840 CA339525678 |
559 | T>A | No |
ClinGen gnomAD |
|
|
CA339525682 rs1307998554 |
559 | T>I | No |
ClinGen TOPMed |
|
|
CA339525677 rs1333019840 |
559 | T>P | No |
ClinGen gnomAD |
|
|
CA339525685 rs1573175323 |
560 | S>P | No |
ClinGen Ensembl |
|
|
CA339525691 rs1380045711 |
561 | A>P | No |
ClinGen gnomAD |
|
|
rs143996470 CA724602 |
561 | A>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1357825188 CA339525701 |
563 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA339525709 rs1573175806 |
564 | I>L | No |
ClinGen Ensembl |
|
|
rs750130518 CA724604 |
565 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA724605 rs138888144 |
567 | G>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs779644852 CA724606 |
569 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs553098402 CA20017425 |
572 | G>D | No |
ClinGen 1000Genomes |
|
|
CA339525759 rs1200237821 |
572 | G>S | No |
ClinGen gnomAD |
|
|
CA724608 rs774641770 |
574 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs201861523 CA724609 |
575 | L>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs770184318 CA724611 |
576 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA724610 rs748752649 |
576 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA724612 rs773637980 |
581 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA339525831 rs1480032163 |
584 | V>L | No |
ClinGen TOPMed |
|
|
CA724613 rs759763337 |
587 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs771309394 CA724614 |
593 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs774665169 CA724615 |
595 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs530909471 CA724617 |
599 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724616 rs759809009 |
599 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA724618 rs752707932 |
600 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724620 rs371082716 |
601 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA20017474 rs371082716 |
601 | E>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1352781859 CA339525963 |
603 | P>L | No |
ClinGen TOPMed |
|
|
rs750266916 CA724621 |
606 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA339526002 rs1298923003 |
609 | E>A | No |
ClinGen TOPMed |
|
|
CA339526005 rs1375826057 |
609 | E>D | No |
ClinGen TOPMed |
|
|
rs1220267676 CA339526012 |
610 | P>L | No |
ClinGen gnomAD |
|
|
CA724622 rs758144060 |
611 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724625 rs751257027 |
613 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA724624 rs751257027 |
613 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs143402077 CA724626 |
614 | W>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA724628 rs543782766 |
615 | K>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339526043 rs1191522965 |
615 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs543782766 CA724627 |
615 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339526255 rs1264206407 |
619 | T>I | No |
ClinGen gnomAD |
|
|
rs1340630145 CA339526260 |
620 | H>D | No |
ClinGen TOPMed |
|
|
CA339526291 rs1343924563 |
622 | E>G | No |
ClinGen TOPMed |
|
|
CA20021758 rs995238557 COSM908019 |
622 | E>K | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs1028510693 CA339526300 |
624 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA339526304 rs1279800613 |
624 | T>I | No |
ClinGen TOPMed |
|
|
rs1028510693 CA20021761 |
624 | T>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1177700247 CA339526307 |
625 | V>I | No |
ClinGen gnomAD |
|
|
CA724658 rs776772596 |
626 | P>L | No |
ClinGen ExAC |
|
|
CA339526386 rs1441018178 |
632 | Q>* | No |
ClinGen gnomAD |
|
|
rs1441018178 CA339526384 |
632 | Q>E | No |
ClinGen gnomAD |
|
|
rs1367851223 CA339526400 |
633 | T>P | No |
ClinGen gnomAD |
|
|
CA724661 rs149962963 |
633 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339526426 rs1315456969 |
635 | K>Q | No |
ClinGen gnomAD |
|
|
rs1316526192 CA339526430 |
635 | K>R | No |
ClinGen gnomAD |
|
|
CA339526436 rs1379629204 |
636 | L>F | No |
ClinGen TOPMed |
|
|
rs1218444233 CA339526440 |
637 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs758741883 CA724675 |
640 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1003754107 CA20021903 |
640 | T>P | No |
ClinGen TOPMed |
|
|
CA339526466 rs1573322015 |
641 | E>K | No |
ClinGen Ensembl |
|
|
rs1207668190 CA339526483 |
643 | L>V | No |
ClinGen gnomAD |
|
|
rs201674226 CA724677 |
644 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1031646566 CA20021971 |
645 | R>G | No |
ClinGen gnomAD |
|
|
CA724679 rs781142017 |
646 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA724678 rs768914456 |
646 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA339526511 rs1260977873 |
647 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA339526519 rs748156133 |
648 | K>N | No |
ClinGen ExAC TOPMed |
|
|
rs1175556075 CA339526551 |
651 | R>K | No |
ClinGen TOPMed |
|
|
CA339526564 rs1433937696 |
653 | R>G | No |
ClinGen gnomAD |
|
|
rs780345005 CA724693 |
655 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1347391487 CA339526622 |
661 | I>V | No |
ClinGen gnomAD |
|
|
rs1274576782 CA339526629 |
662 | R>K | No |
ClinGen gnomAD |
|
|
rs748246317 CA724697 |
662 | R>S | No |
ClinGen ExAC gnomAD |
|
|
CA339526653 rs1306629017 |
665 | N>S | No |
ClinGen gnomAD |
|
|
rs777797434 CA724699 |
667 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1045009412 CA20023214 |
667 | M>V | No |
ClinGen Ensembl |
|
|
CA724711 rs766839144 |
671 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1240284459 CA339526825 |
672 | D>G | No |
ClinGen gnomAD |
|
|
rs755317500 CA724713 |
673 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA724714 rs767844269 |
673 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA724715 rs767844269 |
673 | K>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 676 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724717 rs777888291 |
677 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA724718 rs749331546 |
679 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs141273297 CA724719 |
680 | K>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA20026244 rs148358889 |
681 | H>R | No |
ClinGen ESP |
|
|
CA339526960 rs1183376723 |
682 | H>Y | No |
ClinGen gnomAD |
|
|
rs1234710991 CA339526984 |
684 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 684 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724721 rs746897420 |
685 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA724722 rs768609152 |
688 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs148756198 CA20026282 |
697 | P>A | No |
ClinGen 1000Genomes |
|
|
CA724723 rs776560225 |
697 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA724725 rs142267469 |
700 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs777520843 CA724724 |
700 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339527206 rs1167624164 |
702 | S>T | No |
ClinGen gnomAD |
|
|
CA339527225 rs1399123337 |
704 | W>C | No |
ClinGen gnomAD |
|
|
CA724726 rs772607266 |
707 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA724727 rs772607266 |
707 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1341631 CA339527244 rs1330436509 |
707 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA339527246 rs1330436509 |
707 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339527255 rs1446573787 |
709 | S>P | No |
ClinGen gnomAD |
|
|
rs759931613 CA724730 |
710 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767938360 CA724731 |
711 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
CA339527298 rs1196665580 |
716 | T>A | No |
ClinGen gnomAD |
|
|
CA339527301 rs1490437215 |
716 | T>S | No |
ClinGen TOPMed |
|
|
CA20026348 rs962067440 |
717 | L>I | No |
ClinGen Ensembl |
|
|
CA724734 rs151256834 |
717 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA339527311 rs1382065910 |
718 | N>S | No |
ClinGen gnomAD |
|
|
CA724735 rs35738494 |
720 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757405447 CA724736 |
721 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA724737 rs201337247 |
721 | G>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA339527343 rs1159762856 |
723 | I>F | No |
ClinGen TOPMed |
|
| TCGA novel | 723 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA724739 rs754949095 |
725 | T>I | No |
ClinGen ExAC |
|
|
rs138453402 CA724767 |
729 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1237979474 CA339530032 |
736 | T>S | No |
ClinGen gnomAD |
|
|
rs1285967890 CA339530038 |
737 | V>A | No |
ClinGen gnomAD |
|
|
rs1558302957 CA339530047 |
739 | I>V | No |
ClinGen Ensembl |
|
|
rs1486450525 CA339530072 |
742 | N>S | No |
ClinGen gnomAD |
|
|
rs776025421 CA724768 |
743 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778836774 CA20047142 |
744 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA724770 rs769129156 |
744 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745902060 CA20047151 |
747 | K>R | No |
ClinGen TOPMed |
|
|
rs1437286255 CA339530106 |
748 | S>G | No |
ClinGen gnomAD |
|
|
rs776843734 CA724771 |
750 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA339530122 rs1157490267 |
750 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1573907108 CA339530131 |
751 | P>L | No |
ClinGen Ensembl |
|
|
CA339530134 rs1455330457 |
752 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1161361605 CA339530138 |
752 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs762105115 CA724772 |
753 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1055670232 CA20047170 |
753 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs527487140 CA339530151 |
754 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs750558736 CA724774 |
755 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA724775 rs547322551 |
757 | I>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA724776 rs766549410 |
758 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339530183 rs1165232169 |
759 | H>Q | No |
ClinGen TOPMed |
|
|
rs146073770 CA724778 |
762 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1427773232 CA339530203 |
763 | K>E | No |
ClinGen TOPMed |
|
|
CA20047215 rs539378430 |
764 | T>I | No |
ClinGen 1000Genomes gnomAD |
|
|
CA339530217 rs1356105546 |
765 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
CA339530218 rs1356105546 |
765 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1214630660 CA339530233 |
767 | Y>C | No |
ClinGen gnomAD |
|
|
rs1254531462 CA339530243 |
768 | E>D | No |
ClinGen gnomAD |
|
|
CA724780 rs377592025 |
769 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA339530250 rs756938979 |
770 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724781 rs756938979 |
770 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753698117 CA724798 |
773 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1255414282 CA339523982 |
774 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1475521665 CA339523995 |
775 | N>S | No |
ClinGen gnomAD |
|
|
rs750141423 CA724800 |
777 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA339524008 rs1421295153 |
777 | G>R | No |
ClinGen gnomAD |
|
|
rs758031577 CA724801 |
778 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA339524012 rs758031577 |
778 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs779550116 CA339524021 |
779 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779550116 CA724802 |
779 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA339524044 rs1463615780 |
783 | V>I | No |
ClinGen gnomAD |
|
|
CA339524045 rs1463615780 |
783 | V>L | No |
ClinGen gnomAD |
|
|
rs1027047235 CA20009910 |
784 | L>W | No |
ClinGen Ensembl |
|
|
rs1024414992 CA20009913 |
785 | L>P | No |
ClinGen TOPMed |
|
|
rs1024414992 CA339524059 |
785 | L>R | No |
ClinGen TOPMed |
|
|
CA339524100 rs755536973 |
788 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781498835 CA724805 |
790 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA724806 rs748670764 |
792 | S>T | No |
ClinGen ExAC gnomAD |
|
|
rs1338983460 CA339524180 |
793 | E>G | No |
ClinGen gnomAD |
|
|
CA339524198 rs1218343067 |
794 | T>I | No |
ClinGen gnomAD |
|
|
rs77432961 CA339524209 |
795 | P>L | No |
ClinGen gnomAD |
|
|
rs77432961 CA20009939 |
795 | P>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 796 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749582857 CA724809 |
798 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1558333574 CA339524260 |
798 | T>S | No |
ClinGen Ensembl |
|
|
rs1260859866 CA339524306 |
801 | T>S | No |
ClinGen gnomAD |
|
|
CA339524302 rs1213004691 |
801 | T>S | No |
ClinGen gnomAD |
|
|
rs771221578 CA724810 |
802 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA724811 rs774579391 |
802 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1209621160 CA339525176 |
806 | T>N | No |
ClinGen TOPMed |
|
|
CA20012513 rs144717246 |
807 | V>A | No |
ClinGen ESP TOPMed |
|
|
CA20012514 rs1004924600 |
808 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1016015758 CA20012515 |
809 | G>D | No |
ClinGen Ensembl |
|
|
CA724839 rs769650632 |
813 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA724840 rs148459745 |
815 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA724841 rs762682968 |
815 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA339525284 rs762682968 |
815 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 816 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA339525295 rs1160461798 |
816 | I>T | No |
ClinGen gnomAD |
|
|
CA20012545 rs954392145 |
817 | E>G | No |
ClinGen Ensembl |
|
|
rs1347374381 CA339525322 |
818 | K>Q | No |
ClinGen gnomAD |
|
|
rs1372412247 CA339525347 |
819 | R>K | No |
ClinGen TOPMed |
|
|
rs766136287 CA724842 COSM680096 |
823 | T>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA339525427 rs1324804153 |
824 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs372284952 CA339525444 |
825 | D>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1371222587 CA339525436 |
825 | D>N | No |
ClinGen gnomAD |
|
|
CA20012559 rs372284952 |
825 | D>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA724843 rs376820266 |
827 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1224340422 CA339525497 |
828 | I>T | No |
ClinGen gnomAD |
|
|
rs1349298958 CA339525488 |
828 | I>V | No |
ClinGen gnomAD |
|
|
rs759226090 CA724844 |
829 | D>A | No |
ClinGen ExAC |
|
| TCGA novel | 830 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1293155695 CA339525525 |
830 | H>Y | No |
ClinGen TOPMed |
|
|
CA339526064 rs1419202701 |
834 | L>F | No |
ClinGen TOPMed |
|
|
CA724871 rs750731570 |
840 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA339526104 rs1356910911 |
840 | E>K | No |
ClinGen gnomAD |
|
|
CA339526111 rs758576484 |
841 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA724872 rs758576484 |
841 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs112221827 CA20015028 |
842 | K>E | No |
ClinGen Ensembl |
|
|
rs1006814552 CA20015030 |
842 | K>N | No |
ClinGen Ensembl |
|
|
CA339526139 rs1357149252 |
845 | H>Y | No |
ClinGen gnomAD |
|
|
CA339526147 rs1423537916 |
846 | P>S | No |
ClinGen TOPMed |
|
|
rs747205367 CA724874 |
850 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA20015036 rs763010193 |
852 | K>E | No |
ClinGen Ensembl |
|
|
rs755086806 CA724876 |
853 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1001532396 CA20015039 |
854 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1486863164 CA339526209 |
855 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs770799291 CA724879 |
856 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs147642551 CA724878 |
856 | H>Y | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1297007517 CA339526253 |
857 | Q>H | No |
ClinGen TOPMed |
|
| TCGA novel | 860 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201016843 CA724882 |
860 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
1 associated diseases with P11171
[MIM: 611804]: Elliptocytosis 1 (EL1)
A Rhesus-linked form of hereditary elliptocytosis, a genetically heterogeneous, autosomal dominant hematologic disorder. It is characterized by variable hemolytic anemia and elliptical or oval red cell shape. {ECO:0000269|PubMed:3467321}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A Rhesus-linked form of hereditary elliptocytosis, a genetically heterogeneous, autosomal dominant hematologic disorder. It is characterized by variable hemolytic anemia and elliptical or oval red cell shape. {ECO:0000269|PubMed:3467321}. Note=The disease is caused by variants affecting the gene represented in this entry.
11 regional properties for P11171
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | FERM domain | 210 - 491 | IPR000299 |
| domain | SAB domain | 667 - 715 | IPR007477 |
| domain | Band 4.1, C-terminal | 753 - 860 | IPR008379 |
| domain | FERM adjacent | 498 - 544 | IPR014847 |
| domain | FERM, N-terminal | 214 - 276 | IPR018979 |
| domain | FERM, C-terminal PH-like domain | 405 - 495 | IPR018980 |
| conserved_site | FERM conserved site | 264 - 292 | IPR019747-1 |
| conserved_site | FERM conserved site | 371 - 400 | IPR019747-2 |
| domain | FERM central domain | 294 - 401 | IPR019748 |
| domain | Band 4.1 domain | 206 - 401 | IPR019749 |
| domain | Band 4.1 protein, FERM domain, F1 sub-domain | 210 - 292 | IPR021187 |
12 GO annotations of cellular component
| Name | Definition |
|---|---|
| basolateral plasma membrane | The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis. |
| cell cortex | The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins. |
| cell junction | A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. |
| cortical cytoskeleton | The portion of the cytoskeleton that lies just beneath the plasma membrane. |
| cytoskeleton | A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| intercellular bridge | A direct connection between the cytoplasm of two cells that is formed following the completion of cleavage furrow ingression during cell division. They are usually present only briefly prior to completion of cytokinesis. However, in some cases, such as the bridges between germ cells during their development, they become stabilised. |
| mitotic spindle | A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules. |
| nuclear body | Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| protein-containing complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. |
| spectrin-associated cytoskeleton | The part of the cytoskeleton composed of spectrin, protein 4.1 and ankyrin. Spectrin-associated cytoskeleton is associated with the plasma membrane. |
8 GO annotations of molecular function
| Name | Definition |
|---|---|
| 1-phosphatidylinositol binding | Binding to a phosphatidylinositol, a glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol. |
| actin binding | Binding to monomeric or multimeric forms of actin, including actin filaments. |
| calmodulin binding | Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
| phosphoprotein binding | Binding to a phosphorylated protein. |
| protein C-terminus binding | Binding to a protein C-terminus, the end of a peptide chain at which the 1-carboxyl function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue. |
| protein N-terminus binding | Binding to a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue. |
| spectrin binding | Binding to spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers. |
| structural constituent of cytoskeleton | The action of a molecule that contributes to the structural integrity of a cytoskeletal structure. |
10 GO annotations of biological process
| Name | Definition |
|---|---|
| actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
| actomyosin structure organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. |
| cell cycle | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. |
| cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
| cortical actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane. |
| positive regulation of protein binding | Any process that activates or increases the frequency, rate or extent of protein binding. |
| positive regulation of protein localization to cell cortex | Any process that activates or increases the frequency, rate or extent of protein localization to cell cortex. |
| regulation of calcium ion transport | Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| regulation of cell shape | Any process that modulates the surface configuration of a cell. |
| regulation of intestinal absorption | Any process that modulates the frequency, rate or extent of intestinal absorption. |
13 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9N179 | EPB41 | Protein 4.1 | Bos taurus (Bovine) | PR |
| Q9HCM4 | EPB41L5 | Band 4.1-like protein 5 | Homo sapiens (Human) | PR |
| Q9HCS5 | EPB41L4A | Band 4.1-like protein 4A | Homo sapiens (Human) | PR |
| Q7Z6J6 | FRMD5 | FERM domain-containing protein 5 | Homo sapiens (Human) | PR |
| A2A2Y4 | FRMD3 | FERM domain-containing protein 3 | Homo sapiens (Human) | PR |
| O43491 | EPB41L2 | Band 4.1-like protein 2 | Homo sapiens (Human) | PR |
| Q9H4G0 | EPB41L1 | Band 4.1-like protein 1 | Homo sapiens (Human) | PR |
| Q9Y2J2 | EPB41L3 | Band 4.1-like protein 3 | Homo sapiens (Human) | PR |
| Q9Z2H5 | Epb41l1 | Band 4.1-like protein 1 | Mus musculus (Mouse) | PR |
| O70318 | Epb41l2 | Band 4.1-like protein 2 | Mus musculus (Mouse) | PR |
| Q9WV92 | Epb41l3 | Band 4.1-like protein 3 | Mus musculus (Mouse) | PR |
| P48193 | Epb41 | Protein 4.1 | Mus musculus (Mouse) | PR |
| Q9WTP0 | Epb41l1 | Band 4.1-like protein 1 | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTTEKSLVTE | AENSQHQQKE | EGEEAINSGQ | QEPQQEESCQ | TAAEGDNWCE | QKLKASNGDT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PTHEDLTKNK | ERTSESRGLS | RLFSSFLKRP | KSQVSEEEGK | EVESDKEKGE | GGQKEIEFGT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SLDEEIILKA | PIAAPEPELK | TDPSLDLHSL | SSAETQPAQE | ELREDPDFEI | KEGEGLEECS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KIEVKEESPQ | SKAETELKAS | QKPIRKHRNM | HCKVSLLDDT | VYECVVEKHA | KGQDLLKRVC |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EHLNLLEEDY | FGLAIWDNAT | SKTWLDSAKE | IKKQVRGVPW | NFTFNVKFYP | PDPAQLTEDI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TRYYLCLQLR | QDIVAGRLPC | SFATLALLGS | YTIQSELGDY | DPELHGVDYV | SDFKLAPNQT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| KELEEKVMEL | HKSYRSMTPA | QADLEFLENA | KKLSMYGVDL | HKAKDLEGVD | IILGVCSSGL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LVYKDKLRIN | RFPWPKVLKI | SYKRSSFFIK | IRPGEQEQYE | STIGFKLPSY | RAAKKLWKVC |
| 490 | 500 | 510 | 520 | 530 | 540 |
| VEHHTFFRLT | STDTIPKSKF | LALGSKFRYS | GRTQAQTRQA | SALIDRPAPH | FERTASKRAS |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RSLDGAAAVD | SADRSPRPTS | APAITQGQVA | EGGVLDASAK | KTVVPKAQKE | TVKAEVKKED |
| 610 | 620 | 630 | 640 | 650 | 660 |
| EPPEQAEPEP | TEAWKVEKTH | IEVTVPTSNG | DQTQKLAEKT | EDLIRMRKKK | RERLDGENIY |
| 670 | 680 | 690 | 700 | 710 | 720 |
| IRHSNLMLED | LDKSQEEIKK | HHASISELKK | NFMESVPEPR | PSEWDKRLST | HSPFRTLNIN |
| 730 | 740 | 750 | 760 | 770 | 780 |
| GQIPTGEGPP | LVKTQTVTIS | DNANAVKSEI | PTKDVPIVHT | ETKTITYEAA | QTDDNSGDLD |
| 790 | 800 | 810 | 820 | 830 | 840 |
| PGVLLTAQTI | TSETPSSTTT | TQITKTVKGG | ISETRIEKRI | VITGDADIDH | DQVLVQAIKE |
| 850 | 860 | ||||
| AKEQHPDMSV | TKVVVHQETE | IADE |