Q9UBD5
Gene name |
ORC3 (LATHEO, ORC3L) |
Protein name |
Origin recognition complex subunit 3 |
Names |
Origin recognition complex subunit Latheo |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:23595 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
11 structures for Q9UBD5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 5UJ8 | X-ray | 600 A | A/B/C/D | 1-711 | PDB |
| 5UJM | EM | 1800 A | C | 1-711 | PDB |
| 7CTE | EM | 380 A | C | 1-711 | PDB |
| 7CTF | EM | 480 A | C | 1-711 | PDB |
| 7CTG | EM | 500 A | C | 1-711 | PDB |
| 7JPO | EM | 320 A | C | 1-711 | PDB |
| 7JPP | EM | 370 A | C | 1-711 | PDB |
| 7JPQ | EM | 350 A | C | 1-711 | PDB |
| 7JPR | EM | 400 A | C | 1-711 | PDB |
| 7JPS | EM | 440 A | C | 1-711 | PDB |
| AF-Q9UBD5-F1 | Predicted | AlphaFoldDB |
559 variants for Q9UBD5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA3916920 rs751643866 |
3 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3916921 rs756041517 |
3 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA364920341 rs1474995307 |
4 | S>F | No |
ClinGen gnomAD |
|
|
CA142842040 rs929635001 |
4 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3916923 rs375214415 COSM1754950 |
5 | S>L | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs375214415 CA3916922 |
5 | S>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA142842066 rs149941248 |
6 | M>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA3916924 rs757119067 |
6 | M>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 7 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364920446 rs1363197754 |
8 | K>E | No |
ClinGen gnomAD |
|
|
CA364922019 COSM1697621 rs1288573027 |
11 | F>L | skin [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA364922048 rs1369456470 |
13 | F>S | No |
ClinGen TOPMed |
|
|
rs1240957378 CA364922088 |
16 | N>H | No |
ClinGen gnomAD |
|
|
CA364922094 rs1187238280 |
16 | N>T | No |
ClinGen TOPMed |
|
|
CA3916953 rs562568287 |
17 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201861328 CA364922152 |
19 | K>N | No |
ClinGen 1000Genomes gnomAD |
|
| rs1562313451 | 19 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1174841055 CA364922190 |
21 | K>N | No |
ClinGen gnomAD |
|
|
CA364922250 rs1482405534 |
25 | P>A | No |
ClinGen TOPMed |
|
|
CA364922291 rs1334936472 |
26 | I>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1334936472 CA364922286 |
26 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
CA3916956 rs148696846 |
26 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs775433933 CA3916957 |
27 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3916958 rs775433933 |
27 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364925808 rs1366131140 |
28 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA3916981 rs769739331 |
29 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
CA3916980 rs747104059 |
29 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA142849249 rs1029289566 |
30 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA364925876 rs1463762332 |
31 | N>I | No |
ClinGen TOPMed |
|
|
CA364925893 rs1197896612 |
32 | K>* | No |
ClinGen TOPMed gnomAD |
|
|
CA364925891 rs1197896612 |
32 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA364925935 rs1428857738 |
34 | K>E | No |
ClinGen gnomAD |
|
| TCGA novel | 35 | N>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364925983 rs1265721268 |
36 | E>K | No |
ClinGen gnomAD |
|
|
rs1007451334 CA142849251 |
39 | D>V | No |
ClinGen TOPMed |
|
|
rs1562321025 CA364926094 |
40 | S>C | No |
ClinGen Ensembl |
|
|
CA364926101 rs1192737375 |
40 | S>T | No |
ClinGen gnomAD |
|
|
CA364926165 rs1371592946 COSM1082369 |
43 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine urinary_tract endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA142849256 rs887451492 |
43 | R>Q | No |
ClinGen gnomAD |
|
|
CA3916982 rs371874111 |
44 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3916984 rs142044709 |
45 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA3916987 rs759224108 |
47 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA3916986 rs759224108 |
47 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs752230394 CA3916988 |
48 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1294384488 CA364926306 |
49 | L>F | No |
ClinGen gnomAD |
|
|
CA142849286 rs961800465 |
51 | W>* | No |
ClinGen Ensembl |
|
|
CA142849289 rs1002562002 |
52 | Q>R | No |
ClinGen Ensembl |
|
|
CA3916990 rs557735173 |
53 | Q>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1315053569 CA364926392 |
53 | Q>R | No |
ClinGen gnomAD |
|
|
CA3916991 rs200996438 |
55 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757778253 CA3916992 |
56 | S>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757778253 CA364926446 |
56 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3916993 rs779241848 |
58 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364926501 rs1204964656 |
59 | E>K | No |
ClinGen gnomAD |
|
|
CA3917014 rs780488879 |
60 | R>* | Variant assessed as Somatic; 4.701e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3917015 rs751673223 |
60 | R>L | No |
ClinGen ExAC gnomAD |
|
|
rs751673223 CA3917016 |
60 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs980955356 CA142850394 |
61 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1404963390 CA364927301 |
63 | E>D | No |
ClinGen gnomAD |
|
|
CA3917017 rs781419477 |
64 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA3917018 rs748298205 |
65 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA3917019 rs770970297 |
66 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364927352 rs1391308656 |
66 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs144040713 CA3917020 |
68 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 68 | N>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364927407 rs1185564308 |
69 | L>S | No |
ClinGen gnomAD |
|
|
rs1562323293 CA364927417 |
70 | F>I | No |
ClinGen Ensembl |
|
|
CA364927463 rs1554236707 |
72 | N>S | No |
ClinGen Ensembl |
|
|
CA364927482 rs1326069083 |
73 | L>R | No |
ClinGen gnomAD |
|
|
CA3917022 rs771719506 |
75 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA142850432 rs78910923 |
81 | H>D | No |
ClinGen Ensembl |
|
|
rs368053556 CA3917024 |
82 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs368053556 CA3917025 |
82 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1082370 CA3917026 rs368053556 |
82 | S>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA364927654 rs1428353546 |
83 | G>E | No |
ClinGen TOPMed |
|
|
rs761348781 CA3917027 |
83 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371584444 CA142850475 |
85 | Q>R | No |
ClinGen ESP gnomAD |
|
|
CA142850478 rs112186214 |
88 | S>L | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA142850483 rs1007537050 |
90 | D>Y | No |
ClinGen Ensembl |
|
|
rs1448837634 CA364927784 |
91 | L>* | No |
ClinGen gnomAD |
|
|
CA364927795 rs1435421628 |
92 | G>S | No |
ClinGen TOPMed |
|
|
CA3917030 rs201924978 |
93 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs2307365 CA142850503 |
94 | Q>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1467852142 CA364927837 |
94 | Q>H | No |
ClinGen gnomAD |
|
|
rs2307365 VAR_014516 CA3917031 |
94 | Q>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs752027775 CA3917032 |
94 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs755239248 CA3917033 COSM3949523 |
95 | I>V | lung [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs1354608187 CA364927877 |
97 | L>F | No |
ClinGen gnomAD |
|
|
CA3917034 rs768222677 |
98 | R>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 98 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs867222080 CA142850525 |
100 | I>V | No |
ClinGen Ensembl |
|
|
CA364927944 rs1260270452 |
101 | P>T | No |
ClinGen TOPMed |
|
|
rs752793607 CA3917035 |
102 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150252172 CA364927979 |
103 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3917036 rs150252172 |
103 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364927984 rs1406129626 |
104 | A>T | No |
ClinGen gnomAD |
|
|
rs1277651335 CA364927996 |
104 | A>V | No |
ClinGen TOPMed |
|
|
CA3917037 rs777934350 |
106 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs1344035273 CA364928045 |
107 | L>P | No |
ClinGen gnomAD |
|
|
CA3917038 rs745739175 |
108 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA3917064 rs769554390 |
109 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA3917066 rs149010963 |
110 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1358788635 CA364929084 |
117 | T>A | No |
ClinGen TOPMed |
|
|
CA364929113 rs774881201 |
118 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767939097 CA364929120 |
119 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767939097 CA3917070 |
119 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs373085430 CA3917069 |
119 | G>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA142852003 rs78632433 |
121 | L>P | No |
ClinGen 1000Genomes |
|
|
CA3917072 rs202154049 |
122 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs879074350 CA142852028 |
123 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1387227000 CA364929182 |
123 | E>V | No |
ClinGen gnomAD |
|
|
CA142852045 rs753828103 |
124 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917074 rs764438571 |
124 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753828103 CA3917075 |
124 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs2307371 CA3917076 VAR_014517 |
126 | Q>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs143881974 CA3917077 |
127 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364929269 rs1461357448 |
127 | N>S | No |
ClinGen gnomAD |
|
|
rs751436971 CA3917078 |
129 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA364929325 COSM1082371 rs1471403129 |
130 | T>A | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA142852091 rs77689062 |
130 | T>R | No |
ClinGen Ensembl |
|
|
rs747994639 CA3917081 |
132 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1407711493 CA364929394 |
133 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA364929417 rs1583021348 |
134 | V>L | No |
ClinGen Ensembl |
|
|
CA142852103 rs867016630 |
138 | A>D | No |
ClinGen Ensembl |
|
|
rs146526621 CA3917084 |
139 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3917085 rs141851921 |
140 | D>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364929568 rs1444274705 |
141 | C>F | No |
ClinGen gnomAD |
|
|
rs1337628428 CA364929557 |
141 | C>G | No |
ClinGen gnomAD |
|
|
CA364929563 rs1444274705 |
141 | C>Y | No |
ClinGen gnomAD |
|
|
rs746313408 CA3917087 |
142 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 144 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs141721711 CA364930008 |
144 | M>K | No |
ClinGen ESP ExAC gnomAD |
|
|
rs141721711 CA3917101 |
144 | M>T | No |
ClinGen ESP ExAC gnomAD |
|
|
CA364930031 rs1426806919 COSM1163452 |
145 | K>N | pancreas [Cosmic] | No |
ClinGen cosmic curated TOPMed |
| TCGA novel | 148 | L>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 148 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777454110 CA3917102 |
150 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1253923168 CA364930129 |
152 | I>T | No |
ClinGen gnomAD |
|
|
rs1365885749 CA364930124 |
152 | I>V | No |
ClinGen TOPMed |
|
|
rs1195821708 CA364930154 |
154 | Q>R | No |
ClinGen gnomAD |
|
|
rs150567304 CA3917106 |
156 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776137229 CA3917104 |
156 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA3917105 rs778564271 |
156 | M>R | No |
ClinGen ExAC gnomAD |
|
|
CA3917107 CA364930199 rs772687870 |
157 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364930226 rs1196982905 |
159 | C>Y | No |
ClinGen gnomAD |
|
|
rs1223997968 CA364930242 |
161 | D>N | No |
ClinGen TOPMed |
|
|
rs888438620 CA142853286 |
162 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
COSM1634968 rs780663494 CA3917109 |
162 | I>V | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA364930299 rs1583025617 |
165 | K>E | No |
ClinGen Ensembl |
|
|
rs747488413 CA364930349 |
168 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747488413 CA3917110 |
168 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364930345 rs1167366063 |
168 | E>Q | No |
ClinGen gnomAD |
|
|
CA142853330 rs112741742 |
170 | V>A | No |
ClinGen Ensembl |
|
|
CA3917111 rs769004524 |
170 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917112 rs61756140 |
171 | H>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139602020 CA3917114 |
172 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364930417 rs1197862012 |
173 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs763061576 CA364930451 |
176 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 176 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763061576 CA3917116 |
176 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 177 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3917118 rs752584378 |
178 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917117 rs766476754 |
178 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs546714600 CA3917119 |
179 | Y>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs149324991 CA3917120 COSM421211 |
183 | S>L | urinary_tract [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs916529790 CA142853434 |
185 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
rs528908092 CA3917121 |
187 | W>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3917122 rs756924642 |
188 | Y>N | No |
ClinGen ExAC gnomAD |
|
|
CA3917123 rs778760684 |
189 | M>T | No |
ClinGen ExAC TOPMed |
|
|
CA3917124 rs750127762 |
191 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs779722468 CA3917126 |
193 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 194 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364930724 rs1423119372 |
194 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA364930722 rs1423119372 |
194 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs146286747 CA3917144 |
195 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364930775 rs1157923459 |
197 | P>S | No |
ClinGen gnomAD |
|
|
rs1385920642 CA364930786 |
198 | K>E | No |
ClinGen gnomAD |
|
|
CA142854567 rs1017305318 |
199 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
rs755486842 CA364930872 |
202 | K>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755486842 CA3917147 |
202 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364930868 rs755486842 |
202 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781589071 CA3917148 |
203 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA3917149 rs748719892 |
204 | R>G | No |
ClinGen ExAC gnomAD |
|
| rs1336736903 | 204 | R>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1284092967 CA364930905 |
204 | R>K | No |
ClinGen gnomAD |
|
|
CA3917150 rs756421678 |
204 | R>S | No |
ClinGen ExAC TOPMed |
|
|
rs1387004830 CA364930935 |
206 | T>P | No |
ClinGen TOPMed |
|
|
rs550694781 CA364930958 |
207 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs550694781 CA3917151 |
207 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
CA142854592 rs770418098 |
208 | S>N | No |
ClinGen Ensembl |
|
|
rs1350162756 CA364930978 |
208 | S>R | No |
ClinGen gnomAD |
|
|
CA364931000 rs1562329504 |
209 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs1023624006 CA142854599 |
212 | S>C | No |
ClinGen gnomAD |
|
|
CA364931072 rs1204562644 |
213 | P>L | No |
ClinGen gnomAD |
|
|
CA364931093 rs199698250 |
215 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199698250 CA3917153 |
215 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774478846 CA3917154 |
216 | V>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs2307389 CA364931128 |
217 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3917156 VAR_014518 rs2307389 |
217 | V>I | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA3917157 rs776379739 |
218 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs558130478 CA3917158 |
221 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA364931220 rs1187618743 |
222 | M>T | No |
ClinGen TOPMed |
|
|
rs1470718135 CA364931213 |
222 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1176779657 CA364931264 |
224 | S>N | No |
ClinGen gnomAD |
|
|
CA142854649 rs200682425 |
225 | F>L | No |
ClinGen 1000Genomes TOPMed |
|
|
CA364931278 rs200682425 |
225 | F>V | No |
ClinGen 1000Genomes TOPMed |
|
|
CA142854657 rs199789475 |
227 | T>A | No |
ClinGen 1000Genomes |
|
|
CA3917160 rs773205281 |
228 | K>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 230 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762680238 CA3917161 |
231 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1409755233 CA364931386 |
231 | Q>R | No |
ClinGen gnomAD |
|
|
rs1347849141 CA364931404 |
232 | D>G | No |
ClinGen gnomAD |
|
|
CA3917164 rs367552239 |
234 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767076705 CA3917165 |
236 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs1490763129 CA364933369 |
239 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1054828435 CA142856662 |
239 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1194170230 CA364933430 |
240 | H>P | No |
ClinGen TOPMed |
|
|
rs748091739 CA3917178 |
241 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA3917179 rs769908185 |
242 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917182 rs770789905 |
247 | I>T | No |
ClinGen ExAC gnomAD |
|
|
VAR_014519 CA3917181 rs2307374 |
247 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs773825769 CA3917183 |
248 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1419610690 CA364933631 |
249 | I>F | No |
ClinGen gnomAD |
|
|
CA364933638 rs1486185329 |
249 | I>T | No |
ClinGen TOPMed |
|
|
rs377330226 CA142856696 |
250 | F>L | No |
ClinGen Ensembl |
|
|
CA3917184 rs759240308 |
252 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364933815 rs1270206740 |
254 | T>I | No |
ClinGen TOPMed |
|
|
rs1425876598 CA364933871 |
255 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA364933863 rs1425876598 |
255 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1348511901 CA364933983 |
258 | I>T | No |
ClinGen gnomAD |
|
|
rs1323225723 CA364933971 |
258 | I>V | No |
ClinGen gnomAD |
|
|
rs766872651 CA3917186 |
260 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs752273656 CA3917187 |
261 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917188 rs146446780 |
261 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1317280578 CA364934147 |
262 | L>F | No |
ClinGen gnomAD |
|
|
CA364934176 rs1228833700 |
264 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1288865200 CA364934193 |
264 | P>H | No |
ClinGen gnomAD |
|
|
CA364934213 rs1288865200 |
264 | P>L | No |
ClinGen gnomAD |
|
|
CA3917190 rs754173920 |
265 | H>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs757526059 CA364934254 |
265 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757526059 CA3917191 |
265 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1186083980 CA364934309 |
267 | V>L | No |
ClinGen gnomAD |
|
|
CA364934440 rs1402847650 |
272 | C>F | No |
ClinGen TOPMed gnomAD |
|
|
rs758710875 CA3917195 |
273 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1006586511 CA142856755 |
273 | I>T | No |
ClinGen TOPMed |
|
|
rs779983039 CA3917196 |
276 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1388121367 CA364934541 |
276 | F>S | No |
ClinGen gnomAD |
|
|
CA364934664 rs769822458 |
279 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1039183958 CA142856774 |
281 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1376676043 CA364934737 |
282 | K>E | No |
ClinGen gnomAD |
|
|
rs2307381 VAR_014520 CA3917200 |
287 | T>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA142856783 rs958838465 |
288 | V>I | No |
ClinGen TOPMed |
|
|
rs1442558052 CA364934884 |
289 | L>F | No |
ClinGen gnomAD |
|
|
rs1336327096 CA364934915 |
290 | D>A | No |
ClinGen TOPMed |
|
|
CA364934917 rs1336327096 |
290 | D>G | No |
ClinGen TOPMed |
|
|
CA3917204 rs771817774 |
290 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917205 rs774961991 |
291 | K>N | No |
ClinGen ExAC |
|
|
CA364936645 rs1291368370 |
293 | L>F | No |
ClinGen Ensembl |
|
|
CA364936717 rs1168940771 |
295 | T>I | No |
ClinGen TOPMed |
|
|
CA364936723 rs768083776 |
296 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs527928246 CA3917226 |
296 | T>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA3917225 rs768083776 |
296 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762210269 CA3917227 COSM143477 |
299 | P>L | skin [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA364936873 rs1232083608 |
300 | F>V | No |
ClinGen gnomAD |
|
|
rs1272560576 CA364936917 |
301 | K>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 303 | N>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3917228 rs765819889 |
304 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917229 rs773416807 |
305 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA3917230 rs763335077 |
308 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3917231 rs766871579 |
309 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 310 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs577602128 CA3917232 |
311 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA364937349 rs1451199314 |
315 | L>S | No |
ClinGen gnomAD |
|
|
CA3917233 rs140577831 |
316 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3917234 rs767701428 |
317 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA364937452 rs1169116842 |
319 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3917237 rs778952166 |
321 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA3917236 rs752880587 |
321 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA3917235 rs752880587 |
321 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs758144243 CA3917239 |
323 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917238 rs150481408 |
323 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364937564 rs1248234498 |
325 | I>V | No |
ClinGen TOPMed |
|
|
CA364937603 rs1321223011 |
327 | G>V | No |
ClinGen gnomAD |
|
|
CA3917242 rs746655989 |
328 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767410534 CA142860097 |
329 | Q>R | No |
ClinGen TOPMed |
|
|
rs61753612 CA3917258 |
332 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA364939621 rs751401951 |
334 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs147755470 CA3917262 COSM743926 |
337 | Y>C | lung [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA3917261 rs754591256 |
337 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs904775797 CA142863987 |
340 | P>T | No |
ClinGen gnomAD |
|
|
CA364939845 rs1395518699 |
342 | S>G | No |
ClinGen gnomAD |
|
|
rs1583061468 CA364939959 |
345 | C>F | No |
ClinGen Ensembl |
|
|
CA3917265 rs777152402 |
346 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA142863990 rs866479145 |
348 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA364940022 rs866479145 |
348 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs866479145 CA364940019 |
348 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs771624421 CA3917267 |
353 | R>K | No |
ClinGen ExAC gnomAD |
|
| rs1384876082 | 354 | R>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364940192 rs1562343153 |
355 | I>R | No |
ClinGen Ensembl |
|
|
CA3917268 rs200762592 |
355 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed |
|
|
CA3917269 rs760020988 |
356 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs760020988 COSM1082372 CA364940200 |
356 | N>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
| TCGA novel | 357 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 358 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 358 | L>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs772598039 CA3917270 |
362 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA364940550 rs1246557652 |
366 | I>M | No |
ClinGen gnomAD |
|
|
CA3917271 rs775735806 |
367 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917272 rs760824021 |
367 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1237313402 CA364940563 |
368 | R>C | No |
ClinGen TOPMed |
|
|
CA3917273 rs764172750 |
368 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1394807406 CA364940665 |
371 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs776673161 CA3917294 |
375 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA3917296 rs765334013 |
376 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774208620 CA364941097 |
378 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364941120 rs1276753304 |
379 | Q>E | No |
ClinGen gnomAD |
|
|
rs142333103 CA3917298 |
379 | Q>L | No |
ClinGen ESP ExAC TOPMed |
|
|
rs767331714 CA3917299 |
380 | A>S | No |
ClinGen ExAC |
|
|
CA142864431 rs201077859 |
381 | S>P | No |
ClinGen 1000Genomes |
|
|
rs755759522 CA3917301 |
385 | V>I | No |
ClinGen ExAC |
|
|
rs146416983 CA142864434 |
386 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM197873 rs146416983 CA3917302 |
386 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1191471227 CA364941358 |
387 | L>P | No |
ClinGen gnomAD |
|
|
CA142864444 VAR_014521 rs2307372 |
389 | T>P | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA3917304 rs756785812 |
390 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917305 rs756785812 |
390 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA142864482 rs896169143 |
391 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3917307 rs758883003 |
392 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA364941552 rs1429677451 |
393 | Y>H | No |
ClinGen gnomAD |
|
|
CA142874289 rs376650812 |
396 | E>G | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs371509958 CA3917325 |
398 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364943753 rs1268386118 |
399 | Q>P | No |
ClinGen gnomAD |
|
|
rs1311746066 CA364943774 |
400 | L>S | No |
ClinGen gnomAD |
|
|
CA3917329 rs747585300 |
404 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755232597 CA3917330 |
406 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755232597 CA364943870 |
406 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917332 rs748356726 |
407 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs781551516 CA3917331 |
407 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs770069208 CA3917334 |
408 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs770069208 CA3917333 |
408 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
CA3917335 rs749375844 |
409 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364943964 rs1323548943 |
411 | N>S | No |
ClinGen gnomAD |
|
|
CA364944021 rs1326692404 |
415 | V>I | No |
ClinGen TOPMed |
|
|
rs887993136 CA142874363 |
417 | R>G | No |
ClinGen Ensembl |
|
|
rs1207619157 CA364944054 |
417 | R>K | No |
ClinGen gnomAD |
|
|
CA3917337 rs775249291 |
419 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs543601779 CA3917338 |
420 | H>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs776623223 CA3917340 |
420 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768510660 CA3917339 |
420 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765035200 CA3917342 |
422 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1321259555 CA364944180 |
423 | T>A | No |
ClinGen TOPMed |
|
|
CA364944176 rs1321259555 |
423 | T>P | No |
ClinGen TOPMed |
|
|
rs1437203561 CA364944206 |
424 | S>C | No |
ClinGen TOPMed |
|
| TCGA novel | 424 | S>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364944224 rs1283364699 |
425 | S>C | No |
ClinGen gnomAD |
|
|
CA3917343 rs138599697 |
426 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 427 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364944313 rs1562357495 |
429 | Y>C | No |
ClinGen Ensembl |
|
|
CA364944328 rs1229812275 |
430 | P>A | No |
ClinGen gnomAD |
|
|
rs762332948 CA3917344 |
430 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364944325 rs1229812275 |
430 | P>S | No |
ClinGen gnomAD |
|
|
rs753491827 CA3917345 |
433 | R>* | No |
ClinGen ExAC gnomAD |
|
|
COSM1082374 CA3917346 rs751955777 |
433 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA142874460 rs942044098 |
434 | Q>R | No |
ClinGen TOPMed |
|
|
CA3917365 rs768061137 |
436 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1156725054 CA364945734 |
436 | R>S | No |
ClinGen TOPMed |
|
|
rs1251558869 CA364945748 |
437 | E>Q | No |
ClinGen gnomAD |
|
|
CA142875776 rs913424241 |
438 | L>F | No |
ClinGen TOPMed |
|
|
CA3917366 rs753224272 |
439 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA142875781 rs201209204 |
440 | C>R | No |
ClinGen Ensembl |
|
|
rs1247331275 CA364945872 |
441 | T>K | No |
ClinGen gnomAD |
|
|
rs1477765866 CA364945902 |
442 | C>Y | No |
ClinGen gnomAD |
|
|
rs1171869136 CA364945978 |
444 | E>G | No |
ClinGen gnomAD |
|
|
CA3917367 rs756429593 |
447 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs139108147 CA3917368 |
448 | W>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1562359225 CA364946093 |
449 | D>N | No |
ClinGen Ensembl |
|
|
rs753947077 CA3917369 |
449 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs906121459 CA142875799 |
450 | S>L | No |
ClinGen TOPMed |
|
|
rs757554841 CA3917370 |
451 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1369786633 CA364946124 |
451 | E>K | No |
ClinGen gnomAD |
|
|
rs1325165409 CA364946170 |
452 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA142875808 rs933833241 |
458 | Q>E | No |
ClinGen Ensembl |
|
|
rs143108637 CA3917372 |
458 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1367901108 CA364946339 |
461 | R>K | No |
ClinGen gnomAD |
|
|
rs1367901108 CA364946341 |
461 | R>T | No |
ClinGen gnomAD |
|
|
rs1185554642 CA364929961 |
463 | L>W | No |
ClinGen gnomAD |
|
|
CA3917391 rs371508516 |
464 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364929969 rs1472715295 |
465 | K>Q | No |
ClinGen gnomAD |
|
|
rs148245971 CA3917392 |
467 | E>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3917393 rs528704282 |
469 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA364930035 rs1296121331 |
470 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA364930056 rs1562376333 |
471 | I>T | No |
ClinGen Ensembl |
|
|
CA3917394 rs748085868 |
472 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA364930074 rs1282293303 |
473 | E>Q | No |
ClinGen TOPMed |
|
|
CA364930104 rs756189264 |
475 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs756189264 CA3917395 |
475 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs1213134647 CA364930108 |
475 | C>Y | No |
ClinGen TOPMed |
|
|
rs1310276372 CA364930126 |
476 | F>L | No |
ClinGen gnomAD |
|
|
CA3917396 rs777400116 |
476 | F>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 480 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs939207561 CA142892703 |
480 | K>T | No |
ClinGen TOPMed |
|
|
CA142892706 rs9353493 |
481 | S>F | No |
ClinGen Ensembl |
|
|
CA3917400 rs770654226 |
483 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA142892712 rs202114121 |
484 | E>G | No |
ClinGen 1000Genomes |
|
|
CA364930231 rs1296723984 |
484 | E>K | No |
ClinGen TOPMed |
|
|
rs774015220 CA3917401 |
486 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs745522165 CA3917402 |
490 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs547254849 CA142892717 |
491 | A>T | No |
ClinGen 1000Genomes |
|
|
COSM743924 CA364930350 rs1359199708 |
492 | K>N | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
| TCGA novel | 493 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3917403 rs771512286 |
493 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs775035909 CA3917404 |
497 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs540832273 CA3917406 |
499 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs916515545 CA142892726 |
499 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA142892730 rs946552326 |
502 | Q>P | No |
ClinGen Ensembl |
|
|
rs146268634 CA3917409 COSM1082376 |
503 | S>N | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs750618137 CA3917410 |
503 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs758755080 CA3917411 |
505 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA364930534 rs1433408780 |
506 | E>K | No |
ClinGen gnomAD |
|
|
CA364931536 rs1364693991 |
507 | T>P | No |
ClinGen TOPMed |
|
|
rs1299802807 CA364931567 |
508 | K>R | No |
ClinGen gnomAD |
|
|
CA364931581 rs1213732689 |
509 | E>Q | No |
ClinGen gnomAD |
|
|
CA3917428 rs200525076 |
510 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs763237561 CA3917430 |
511 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1435651467 CA364931680 |
512 | D>A | No |
ClinGen TOPMed |
|
|
CA3917431 rs369225174 |
513 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3917432 rs369225174 |
513 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199578553 CA142893568 |
513 | A>V | No |
ClinGen 1000Genomes |
|
|
CA3917435 rs199748447 |
517 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364931794 rs1249143374 |
518 | P>S | No |
ClinGen gnomAD |
|
|
rs1289008126 CA364931809 |
519 | K>Q | No |
ClinGen TOPMed |
|
|
CA3917437 rs757197499 |
520 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA364931851 rs1442755218 |
521 | L>F | No |
ClinGen gnomAD |
|
|
CA364931908 rs1278676406 |
524 | T>S | No |
ClinGen TOPMed |
|
|
CA364931942 rs1165417519 |
525 | D>V | No |
ClinGen gnomAD |
|
|
rs1236615395 CA364931997 |
527 | Y>C | No |
ClinGen TOPMed |
|
|
rs1424613858 CA364932033 |
529 | L>F | No |
ClinGen gnomAD |
|
|
rs778671239 CA3917438 |
529 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA3917439 rs750255923 |
530 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771364528 CA3917468 |
532 | S>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA142893758 rs138153363 |
532 | S>Y | No |
ClinGen ESP |
|
|
rs1373466873 CA364932289 |
535 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1431219558 CA364932883 |
536 | M>L | No |
ClinGen gnomAD |
|
|
CA142893764 rs1027997906 |
538 | E>V | No |
ClinGen TOPMed |
|
|
rs772220228 CA3917471 |
540 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs772220228 CA364932994 |
540 | R>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 541 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364933091 rs1583164534 |
543 | K>* | No |
ClinGen Ensembl |
|
|
rs1583164545 CA364933111 |
543 | K>M | No |
ClinGen Ensembl |
|
|
CA142893767 rs967458110 |
544 | K>R | No |
ClinGen Ensembl |
|
|
CA3917472 rs775615229 |
546 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs760618481 CA3917473 |
550 | V>L | No |
ClinGen ExAC |
|
|
CA3917474 rs142321378 |
552 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 553 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364933498 rs1299028818 |
554 | N>I | No |
ClinGen TOPMed |
|
|
rs773079986 CA3917475 |
559 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1278629520 CA364933722 |
560 | D>Y | No |
ClinGen gnomAD |
|
|
rs1344809218 CA364933759 |
561 | C>R | No |
ClinGen gnomAD |
|
|
CA364935854 rs1582090256 |
566 | Y>* | No |
ClinGen Ensembl |
|
|
CA364935845 rs1582090234 |
566 | Y>S | No |
ClinGen Ensembl |
|
|
rs920408105 CA142894774 |
567 | L>V | No |
ClinGen Ensembl |
|
|
CA364935937 rs1251020760 |
570 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA364935934 rs1251020760 |
570 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA364936022 rs774368487 |
573 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774368487 CA3917495 |
573 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1193566667 CA364936061 |
574 | P>L | No |
ClinGen gnomAD |
|
|
CA364936093 rs1474220519 |
576 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
CA364936108 rs767350523 |
576 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767350523 CA364936099 |
576 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917497 rs767350523 |
576 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 578 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364936176 rs1582090424 |
578 | V>G | No |
ClinGen Ensembl |
|
|
rs755887423 CA3917499 |
579 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs755887423 CA364936213 |
579 | V>G | No |
ClinGen ExAC gnomAD |
|
|
rs1582090488 CA364936300 |
582 | S>G | No |
ClinGen Ensembl |
|
|
CA3917501 rs753438783 |
584 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA364936380 rs1318069736 |
585 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs771689518 CA3917502 |
586 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3917503 VAR_014522 rs2307370 |
588 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs750968797 CA3917504 |
588 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758621249 CA3917505 |
589 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA364936525 rs1341652163 |
593 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3917507 rs61747273 |
595 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364936575 rs1260741878 |
596 | R>* | No |
ClinGen gnomAD |
|
|
rs781229815 CA3917510 |
596 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781229815 CA3917509 |
596 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3917511 rs572797674 |
599 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774091388 CA3917512 |
600 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1227688214 CA364936689 |
601 | T>I | No |
ClinGen TOPMed |
|
|
rs759532610 CA3917513 |
603 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs771749853 CA3917514 |
604 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs775491363 CA3917515 |
605 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs763886530 CA3917517 COSM1487976 |
608 | Y>C | breast [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
rs1354995328 CA364936879 |
609 | Y>* | No |
ClinGen gnomAD |
|
|
rs375586431 CA3917519 |
611 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364936962 rs1330981442 |
611 | K>N | No |
ClinGen TOPMed |
|
|
rs769706558 CA3917529 |
613 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1194082022 CA364938113 |
615 | L>P | No |
ClinGen TOPMed |
|
|
CA142895202 rs986393914 |
617 | S>N | No |
ClinGen Ensembl |
|
|
rs370143904 CA3917531 |
618 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139494209 CA364938215 |
620 | G>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs139494209 CA3917532 |
620 | G>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs775401785 CA3917533 |
621 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs930774313 CA142895214 |
623 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA142895211 rs942451218 |
623 | P>S | No |
ClinGen Ensembl |
|
|
CA3917536 rs28381545 VAR_020656 |
626 | A>T | No |
ClinGen UniProt ExAC TOPMed dbSNP gnomAD |
|
|
rs201741907 CA142895227 |
627 | P>L | No |
ClinGen 1000Genomes |
|
|
CA3917538 rs764651822 |
628 | D>A | No |
ClinGen ExAC gnomAD |
|
|
rs761537216 CA3917537 |
628 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA142895235 rs944953670 |
632 | A>T | No |
ClinGen TOPMed |
|
|
CA364938507 rs537346696 |
633 | Y>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1194853382 CA364938488 |
633 | Y>H | No |
ClinGen gnomAD |
|
|
CA3917542 rs752093687 |
636 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs930914918 CA142895254 |
643 | I>S | No |
ClinGen Ensembl |
|
|
rs756424569 CA3917546 |
646 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777681403 CA3917547 |
647 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs374112561 CA142895487 |
651 | A>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA364939043 rs374112561 |
651 | A>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs762489164 CA3917558 |
652 | F>I | No |
ClinGen ExAC gnomAD |
|
|
CA142895495 rs962319316 |
652 | F>S | No |
ClinGen Ensembl |
|
| TCGA novel | 653 | A>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs995425127 CA142895498 |
654 | T>A | No |
ClinGen TOPMed |
|
|
CA364939171 rs1367858083 |
654 | T>I | No |
ClinGen TOPMed |
|
| TCGA novel | 655 | V>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774784275 CA3917560 |
657 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA364939261 rs1218602181 |
658 | A>T | No |
ClinGen gnomAD |
|
|
CA364939308 rs1485717897 |
659 | A>D | No |
ClinGen gnomAD |
|
|
rs760095466 CA3917561 |
659 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA3917562 rs767862704 |
660 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1259789113 CA364939363 |
661 | K>R | No |
ClinGen gnomAD |
|
|
rs1423576659 CA364939369 |
662 | M>L | No |
ClinGen TOPMed |
|
|
rs1423576659 CA364939377 |
662 | M>V | No |
ClinGen TOPMed |
|
| TCGA novel | 662 | M>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1383040746 CA364939420 |
663 | D>V | No |
ClinGen TOPMed |
|
|
rs148557057 CA3917563 |
667 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364939615 rs1470216521 |
668 | T>A | No |
ClinGen TOPMed |
|
|
rs1161270519 CA364939759 |
672 | M>I | No |
ClinGen gnomAD |
|
|
rs1179577332 CA364939733 |
672 | M>V | No |
ClinGen TOPMed |
|
|
rs754035512 CA3917566 |
673 | N>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 674 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 676 | I>= | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364939892 rs1203272664 |
676 | I>S | No |
ClinGen TOPMed gnomAD |
|
|
COSM1082378 rs188446659 CA3917582 |
679 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA364941293 rs1238697733 |
679 | R>W | No |
ClinGen gnomAD |
|
|
CA364941379 rs1276724070 |
683 | A>T | No |
ClinGen gnomAD |
|
|
CA364941394 rs1363565327 |
683 | A>V | No |
ClinGen TOPMed |
|
|
CA142895981 rs977840958 |
693 | I>V | No |
ClinGen TOPMed |
|
|
CA3917586 rs754030896 |
695 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3917585 rs764365816 |
695 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs761797608 CA142895989 |
697 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs146518052 CA142895993 |
698 | Q>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3917588 rs146518052 |
698 | Q>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1562391023 CA364941835 |
701 | D>N | No |
ClinGen Ensembl |
|
|
CA364941886 rs1171786443 |
703 | V>G | No |
ClinGen gnomAD |
|
|
rs750581600 CA3917589 |
707 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs998630524 CA142896007 |
708 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1386952429 CA364941963 |
709 | G>E | No |
ClinGen TOPMed |
|
|
CA364942004 rs1441833224 |
711 | C>F | No |
ClinGen TOPMed |
|
|
rs1441833224 CA364942000 |
711 | C>Y | No |
ClinGen TOPMed |
No associated diseases with Q9UBD5
3 regional properties for Q9UBD5
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromatin | The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. |
| chromosome, telomeric region | The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres). |
| DNA replication preinitiation complex | A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present. |
| nuclear body | Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins. |
| nuclear origin of replication recognition complex | A multisubunit complex that is located at the replication origins of a chromosome in the nucleus. |
| nuclear pre-replicative complex | A protein-DNA complex assembled at eukaryotic DNA replication origins during late mitosis and G1, allowing the origin to become competent, or 'licensed', for replication. The complex normally includes the origin recognition complex (ORC), Cdc6, Cdt1 and the MiniChromosome Maintenance (Mcm2-7) proteins. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| origin recognition complex | A multisubunit complex that is located at the replication origins of a chromosome. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA replication origin binding | Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally. |
5 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA replication | The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA. |
| DNA replication initiation | The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate. |
| glial cell proliferation | The multiplication or reproduction of glial cells by cell division, resulting in the expansion of their population. Glial cells exist throughout the nervous system, and include Schwann cells, astrocytes, and oligodendrocytes among others. |
| neural precursor cell proliferation | The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell. |
| regulation of DNA replication | Any process that modulates the frequency, rate or extent of DNA replication. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATSSMSKGC | FVFKPNSKKR | KISLPIEDYF | NKGKNEPEDS | KLRFETYQLI | WQQMKSENER |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LQEELNKNLF | DNLIEFLQKS | HSGFQKNSRD | LGGQIKLREI | PTAALVLGVN | VTDHDLTFGS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LTEALQNNVT | PYVVSLQAKD | CPDMKHFLQK | LISQLMDCCV | DIKSKEEESV | HVTQRKTHYS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| MDSLSSWYMT | VTQKTDPKML | SKKRTTSSQW | QSPPVVVILK | DMESFATKVL | QDFIIISSQH |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LHEFPLILIF | GIATSPIIIH | RLLPHAVSSL | LCIELFQSLS | CKEHLTTVLD | KLLLTTQFPF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| KINEKVLQVL | TNIFLYHDFS | VQNFIKGLQL | SLLEHFYSQP | LSVLCCNLPE | AKRRINFLSN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NQCENIRRLP | SFRRYVEKQA | SEKQVALLTN | ERYLKEETQL | LLENLHVYHM | NYFLVLRCLH |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KFTSSLPKYP | LGRQIRELYC | TCLEKNIWDS | EEYASVLQLL | RMLAKDELMT | ILEKCFKVFK |
| 490 | 500 | 510 | 520 | 530 | 540 |
| SYCENHLGST | AKRIEEFLAQ | FQSLDETKEE | EDASGSQPKG | LQKTDLYHLQ | KSLLEMKELR |
| 550 | 560 | 570 | 580 | 590 | 600 |
| RSKKQTKFEV | LRENVVNFID | CLVREYLLPP | ETQPLHEVVY | FSAAHALREH | LNAAPRIALH |
| 610 | 620 | 630 | 640 | 650 | 660 |
| TALNNPYYYL | KNEALKSEEG | CIPNIAPDIC | IAYKLHLECS | RLINLVDWSE | AFATVVTAAE |
| 670 | 680 | 690 | 700 | 710 | |
| KMDANSATSE | EMNEIIHARF | IRAVSELELL | GFIKPTKQKT | DHVARLTWGG | C |