Q9UBB9
Gene name |
TFIP11 (STIP, HSPC006) |
Protein name |
Tuftelin-interacting protein 11 |
Names |
Septin and tuftelin-interacting protein 1, STIP-1 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:24144 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9UBB9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9UBB9-F1 | Predicted | AlphaFoldDB |
658 variants for Q9UBB9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA10164927 rs750024709 |
3 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs767949786 CA10164926 |
5 | H>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411026482 rs767949786 |
5 | H>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000973266 CA10164924 rs34764403 |
8 | R>Q | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs144137379 CA10164925 |
8 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA411026421 rs1468215587 |
9 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA411026423 rs1468215587 |
9 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA322846482 rs1034300734 |
11 | E>K | No |
ClinGen Ensembl |
|
|
CA10164922 rs200830209 |
13 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10164923 rs200830209 |
13 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10164921 rs199753073 |
13 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs199753073 CA411026336 |
13 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411026329 rs769842402 |
14 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164920 rs769842402 |
14 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164919 rs759824411 |
18 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA322846448 rs1004139892 |
19 | D>G | No |
ClinGen TOPMed |
|
|
CA411026216 rs1182109941 |
20 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs367925543 CA10164913 |
21 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1264227822 CA411026196 |
21 | R>Q | No |
ClinGen gnomAD |
|
|
CA10164912 rs367925543 |
21 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1346584020 CA411026193 |
22 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA322846433 rs995586830 |
24 | F>S | No |
ClinGen Ensembl |
|
|
rs1308669331 CA411026148 |
25 | E>Q | No |
ClinGen TOPMed |
|
|
CA411026135 rs1237935394 |
26 | I>L | No |
ClinGen gnomAD |
|
|
rs183323311 CA10164910 |
27 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs755641611 CA10164907 |
28 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164908 rs779761689 |
28 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1569167287 CA411026085 |
29 | W>C | No |
ClinGen Ensembl |
|
|
rs750125870 CA10164906 |
31 | L>F | No |
ClinGen ExAC TOPMed |
|
|
rs1381949054 CA411026040 |
33 | N>D | No |
ClinGen gnomAD |
|
|
CA10164904 rs757654959 |
34 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA411025991 rs1454546740 |
36 | N>K | No |
ClinGen gnomAD |
|
|
rs751929217 CA10164903 |
36 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411025995 rs751929217 |
36 | N>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411025974 rs1382363662 |
38 | N>H | No |
ClinGen gnomAD |
|
|
CA10164902 rs764439592 |
39 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1444332271 CA411025957 |
39 | R>L | No |
ClinGen gnomAD |
|
|
CA411025935 rs1190304154 |
41 | R>C | No |
ClinGen gnomAD |
|
|
CA10164900 rs374920214 |
41 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1418693750 CA411025916 |
42 | H>Q | No |
ClinGen TOPMed |
|
|
CA411025922 rs1186200551 |
42 | H>R | No |
ClinGen TOPMed |
|
|
CA411025863 rs1203991410 |
46 | K>R | No |
ClinGen gnomAD |
|
|
rs1569167221 CA411025845 |
47 | E>G | No |
ClinGen Ensembl |
|
| TCGA novel | 49 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411025804 rs1243513496 |
50 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1358534347 CA411025800 |
50 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA10164894 rs774324163 |
52 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs768551793 CA10164893 CA411025764 |
53 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs768551793 CA411025766 |
53 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA10164892 rs749265331 |
54 | W>S | No |
ClinGen ExAC gnomAD |
|
|
CA10164891 rs775532421 |
55 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA411025732 rs1363240229 |
56 | E>Q | No |
ClinGen TOPMed |
|
|
rs140252083 CA10164890 |
57 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745311916 CA10164889 |
57 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164887 rs756927674 |
58 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA322846312 rs913609812 |
59 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs367676623 CA10164884 |
62 | E>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA411025631 rs1264686886 |
65 | S>N | No |
ClinGen gnomAD |
|
|
rs1475474755 CA411025623 |
66 | F>S | No |
ClinGen TOPMed |
|
|
CA10164882 rs765671711 |
69 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411025599 rs189780437 |
70 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs753930422 CA10164880 |
70 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164881 rs189780437 |
70 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs190370238 CA10164857 |
72 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs762114447 CA411025126 |
72 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762114447 CA10164856 |
72 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775495472 CA10164855 |
74 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs151208617 CA10164853 |
75 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411025105 rs151208617 COSM726041 |
75 | S>F | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs991690465 CA322844083 |
76 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA10164852 rs776590069 |
79 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA322844080 rs960306921 |
80 | F>S | No |
ClinGen Ensembl |
|
|
rs771774141 CA10164848 |
83 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs143474250 CA10164849 |
83 | A>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411025058 rs143474250 |
83 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs143474250 CA10164850 |
83 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs747765220 CA10164847 |
84 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs972008409 CA322844069 |
86 | K>Q | No |
ClinGen Ensembl |
|
|
CA411025029 rs1194849259 CA411025028 |
88 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs575395467 CA322844049 |
89 | A>P | No |
ClinGen 1000Genomes |
|
|
CA10164844 rs561422389 |
89 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs113203306 CA322844045 |
90 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10164843 rs746898318 |
90 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164842 rs113203306 |
90 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10164840 CA411025002 rs781417649 |
92 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs17853157 CA322844020 |
95 | L>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs17853157 CA10164839 |
95 | L>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA322844013 rs542105729 |
96 | E>K | No |
ClinGen 1000Genomes |
|
|
CA10164838 rs751785239 |
97 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164837 rs764971604 |
98 | S>Y | No |
ClinGen ExAC |
|
|
rs1569165207 CA411024957 |
99 | D>E | No |
ClinGen Ensembl |
|
|
CA411024959 rs1446670188 |
99 | D>G | No |
ClinGen gnomAD |
|
|
CA10164835 rs759307498 COSM277662 |
101 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA10164833 rs766397633 |
104 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA10164834 rs144183934 |
104 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411024916 rs1229441694 |
105 | V>A | No |
ClinGen gnomAD |
|
|
rs931376453 CA322843998 |
107 | Q>R | No |
ClinGen TOPMed |
|
|
CA322843991 rs760598435 |
108 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164830 rs772745770 |
109 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA411024873 rs1359507799 |
111 | P>R | No |
ClinGen gnomAD |
|
|
rs1448209879 CA411024870 |
112 | K>E | No |
ClinGen TOPMed |
|
|
CA10164829 rs771546969 |
113 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA10164828 rs761474802 |
116 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA411024838 rs761474802 |
116 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA10164827 rs141028033 |
118 | K>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA322843924 rs987312026 |
119 | L>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 120 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411024808 rs1569165077 |
121 | T>M | No |
ClinGen Ensembl |
|
| TCGA novel | 122 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1258173278 CA411024777 |
124 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1049732876 CA322843657 |
125 | F>L | No |
ClinGen TOPMed |
|
|
CA411024771 rs1219893262 |
125 | F>V | No |
ClinGen gnomAD |
|
|
CA411024766 rs1205055229 |
126 | K>E | No |
ClinGen TOPMed |
|
|
CA10164800 rs770262853 |
130 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs746401440 CA10164799 |
131 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411024679 rs931880654 |
133 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA411024687 rs1369514935 |
133 | A>T | No |
ClinGen gnomAD |
|
|
CA322843642 rs931880654 |
133 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA10164797 rs139526968 |
134 | G>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 137 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747170866 CA10164796 |
137 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA322843619 rs376254377 |
139 | F>L | No |
ClinGen Ensembl |
|
|
rs79822310 CA10164795 |
140 | M>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs748293392 CA10164793 |
140 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs79822310 CA10164794 |
140 | M>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 141 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA322843581 rs988536309 |
143 | G>S | No |
ClinGen TOPMed |
|
|
rs959789539 CA322843579 |
155 | K>Q | No |
ClinGen TOPMed |
|
|
CA10164789 rs750368084 |
161 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs751148942 CA10164786 |
163 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs763482421 CA411024251 |
164 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs763482421 CA10164785 |
164 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs777122131 CA10164781 |
166 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777122131 CA10164780 |
166 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765698955 CA10164782 |
166 | R>W | Variant assessed as Somatic; 4.629e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs773386803 CA10164777 |
169 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA411024165 rs1416185932 |
172 | A>T | No |
ClinGen TOPMed |
|
|
rs1286764584 CA411024158 |
172 | A>V | No |
ClinGen TOPMed |
|
| TCGA novel | 174 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411023494 rs1409850952 |
177 | N>K | No |
ClinGen TOPMed |
|
|
rs6005062 VAR_054069 CA322841997 |
177 | N>S | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs942007614 CA322841975 |
179 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA10164750 rs749485260 |
183 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs982639912 CA322841963 |
185 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1385491760 CA411023390 |
185 | K>R | No |
ClinGen TOPMed |
|
|
CA10164749 rs770584736 |
187 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1569163223 CA411023343 |
190 | V>L | No |
ClinGen Ensembl |
|
|
CA10164747 rs746999481 |
193 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs922428629 CA322841936 |
195 | S>C | No |
ClinGen TOPMed |
|
|
rs549047340 CA322841928 |
196 | E>K | No |
ClinGen gnomAD |
|
|
CA10164745 rs201335417 |
197 | R>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1415378 CA10164744 rs752321351 |
197 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1268751194 CA411023289 |
199 | T>A | No |
ClinGen TOPMed |
|
|
CA10164743 rs778535421 |
199 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs754722946 CA10164742 |
201 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA322841915 rs964133991 |
201 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs760879057 CA10164739 |
204 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1196499300 CA411023195 |
205 | F>L | No |
ClinGen gnomAD |
|
|
rs750956291 CA10164738 |
205 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA322841896 rs778941711 |
206 | P>H | No |
ClinGen Ensembl |
|
|
rs372337248 CA10164736 |
207 | V>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs774459645 CA10164735 |
210 | S>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs914102099 CA322841888 |
210 | S>A | No |
ClinGen TOPMed |
|
|
rs576060276 CA322841859 |
212 | E>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs936899993 CA322841861 |
212 | E>G | No |
ClinGen Ensembl |
|
|
rs1569163063 CA411023129 |
212 | E>K | No |
ClinGen Ensembl |
|
|
rs980703232 CA322841853 |
215 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 216 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1437654303 CA411022922 |
219 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs1437654303 CA411022924 |
219 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA10164708 rs372018751 |
219 | Q>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1459013993 CA411022876 |
222 | L>P | No |
ClinGen gnomAD |
|
|
CA10164707 rs774362810 |
222 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 224 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411022838 rs1247419537 |
225 | W>R | No |
ClinGen Ensembl |
|
|
rs1419501749 CA411022831 |
225 | W>S | No |
ClinGen TOPMed |
|
|
CA10164706 rs367796915 |
226 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1161044256 CA411022823 |
226 | R>W | No |
ClinGen TOPMed |
|
|
rs1424264571 CA411022774 |
229 | P>Q | No |
ClinGen TOPMed |
|
|
CA322840975 rs891899436 |
230 | S>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1367604471 CA411022764 |
230 | S>T | No |
ClinGen TOPMed |
|
|
rs1602215091 CA411022740 |
232 | S>T | No |
ClinGen Ensembl |
|
|
rs1298155674 CA411022718 |
233 | K>N | No |
ClinGen TOPMed |
|
|
rs779612541 CA10164704 |
234 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA411022699 rs1353524708 |
235 | K>Q | No |
ClinGen gnomAD |
|
|
CA10164702 rs745512662 |
238 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs781437423 CA411022613 |
240 | Y>* | No |
ClinGen ExAC gnomAD |
|
|
rs1359221650 CA411022598 |
242 | T>N | No |
ClinGen gnomAD |
|
|
CA10164699 rs147540948 |
243 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs147540948 CA10164698 |
243 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs1158970523 CA411022575 |
246 | L>S | No |
ClinGen gnomAD |
|
|
rs752757045 CA411022567 |
247 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA10164695 rs752757045 |
247 | K>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 249 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10164694 rs765334770 |
249 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs755445868 CA10164693 |
251 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1602214868 CA411022542 |
251 | R>K | No |
ClinGen Ensembl |
|
|
rs1276878978 CA411022520 |
254 | K>R | No |
ClinGen gnomAD |
|
|
CA10164692 rs372358265 |
255 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA322840974 rs372358265 |
255 | K>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1480935157 CA411022502 |
257 | T>A | No |
ClinGen TOPMed |
|
|
CA411022496 rs754408241 |
258 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs754408241 CA10164691 |
258 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164690 rs761640663 |
259 | P>L | No |
ClinGen ExAC |
|
|
rs1013510321 CA322840973 |
260 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1387144433 CA411022462 |
263 | L>F | No |
ClinGen TOPMed |
|
|
CA322840970 rs947715761 |
263 | L>R | No |
ClinGen gnomAD |
|
|
CA411022453 rs1408230237 |
265 | Q>E | No |
ClinGen TOPMed |
|
|
rs1468997698 CA411022402 |
269 | I>M | No |
ClinGen gnomAD |
|
|
CA411022389 rs1423834251 |
271 | M>T | No |
ClinGen gnomAD |
|
|
CA10164668 rs763959978 |
272 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs775462085 CA10164666 |
274 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411022372 rs1437137361 |
274 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1465218872 CA411022347 |
277 | K>M | No |
ClinGen gnomAD |
|
| TCGA novel | 277 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776109184 CA10164663 |
279 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411022336 rs1333659371 |
279 | Y>D | No |
ClinGen TOPMed |
|
|
CA411022335 rs776109184 |
279 | Y>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA322839600 rs986918981 |
283 | S>C | No |
ClinGen TOPMed |
|
|
CA322839597 rs940681529 |
285 | I>F | No |
ClinGen Ensembl |
|
|
CA10164660 rs778129471 |
286 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs887824065 CA411022284 |
286 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
CA322839577 rs887824065 |
286 | S>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 287 | H>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA322839576 rs1049215867 |
289 | H>Y | No |
ClinGen TOPMed |
|
|
rs772437559 CA10164658 |
290 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs372995914 CA10164657 |
290 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411022248 rs1229217198 |
291 | V>A | No |
ClinGen gnomAD |
|
|
CA10164655 rs200507071 |
291 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10164654 rs754036309 |
292 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA411022239 rs1443113220 |
293 | D>A | No |
ClinGen TOPMed gnomAD |
|
|
rs756454926 CA411022241 |
293 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164652 rs756454926 |
293 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs75486435 CA10164650 |
294 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1374990691 CA411022234 |
294 | D>N | No |
ClinGen TOPMed |
|
| TCGA novel | 295 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10164649 rs369951444 |
297 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411022213 rs369951444 |
297 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411022204 rs1436687849 |
299 | Q>* | No |
ClinGen TOPMed |
|
|
CA10164647 rs765279883 |
299 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs112762859 CA10164646 |
301 | Q>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA411022190 rs1464757312 |
301 | Q>P | No |
ClinGen gnomAD |
|
|
CA411022184 rs1177259294 |
302 | Q>* | No |
ClinGen gnomAD |
|
|
rs1602209656 CA411022180 |
302 | Q>H | No |
ClinGen Ensembl |
|
|
CA322839487 rs866399461 |
302 | Q>R | No |
ClinGen Ensembl |
|
|
rs1569160496 CA411022164 |
305 | Q>R | No |
ClinGen Ensembl |
|
|
rs373154996 CA10164641 |
307 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1230655356 CA411022149 |
308 | K>Q | No |
ClinGen TOPMed |
|
|
rs748603113 CA10164640 |
309 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA411022141 rs748603113 |
309 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164639 rs779138240 |
310 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs769247795 CA10164638 |
311 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1602209498 CA411022115 |
313 | P>A | No |
ClinGen Ensembl |
|
|
rs1306777917 CA411022111 |
313 | P>R | No |
ClinGen gnomAD |
|
|
CA10164635 rs756223644 |
314 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA10164633 rs569185412 |
316 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10164632 rs569185412 |
316 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1401571030 CA411022094 |
316 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1436788693 CA411022090 |
317 | L>P | No |
ClinGen gnomAD |
|
|
CA411022085 rs1334148970 |
318 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
COSM1415376 CA411022082 rs753731297 |
319 | E>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA10164626 rs760120238 |
319 | E>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1535348 CA10164628 rs753731297 |
319 | E>K | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA322839379 rs753731297 |
319 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1454827357 CA411022069 |
321 | E>A | No |
ClinGen TOPMed |
|
| TCGA novel | 321 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1015188609 CA322839368 |
323 | N>K | No |
ClinGen Ensembl |
|
|
CA10164625 rs772695018 |
323 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA411022019 rs774829895 |
329 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164622 rs774829895 |
329 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164620 rs749845405 |
331 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164618 rs768987228 |
333 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs996239314 CA322839332 |
335 | I>N | No |
ClinGen Ensembl |
|
|
CA10164617 rs182723168 |
338 | N>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10164616 rs182723168 |
338 | N>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10164614 rs747148907 |
339 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757542693 CA10164615 |
339 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA411021942 rs1416883701 |
340 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA10164613 COSM247798 rs778796621 |
340 | R>W | prostate [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA411021937 rs1338658071 |
341 | Q>R | No |
ClinGen gnomAD |
|
|
rs754697623 CA10164612 |
343 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1470035319 CA411021919 |
344 | Y>D | No |
ClinGen TOPMed |
|
|
rs1176856159 CA411021913 |
345 | E>K | No |
ClinGen TOPMed |
|
|
CA10164610 rs138581074 |
346 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs753786291 CA10164611 |
346 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411021899 rs1460923790 |
347 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs943886853 CA322839268 |
347 | D>N | No |
ClinGen Ensembl |
|
|
CA411021885 rs1162018040 |
349 | V>L | No |
ClinGen gnomAD |
|
|
CA411021884 rs1162018040 |
349 | V>M | No |
ClinGen gnomAD |
|
|
rs1367269836 CA411021880 |
350 | V>I | No |
ClinGen TOPMed |
|
|
CA10164609 rs144808415 |
351 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10164608 rs144808415 |
351 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1008530 CA411021847 |
354 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA411021846 rs1475984249 |
355 | E>K | No |
ClinGen gnomAD |
|
|
CA411021833 rs1442700122 |
357 | E>K | No |
ClinGen TOPMed |
|
|
CA10164606 rs761551508 |
358 | K>M | No |
ClinGen ExAC gnomAD |
|
|
CA411021804 rs1447435768 |
360 | T>I | No |
ClinGen gnomAD |
|
|
rs573044162 CA411021799 |
361 | E>A | No |
ClinGen TOPMed |
|
|
CA322839251 rs573044162 |
361 | E>V | No |
ClinGen TOPMed |
|
|
rs1305591631 CA411021796 |
362 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA411021783 rs1319865614 |
364 | D>N | No |
ClinGen TOPMed |
|
|
CA411021774 rs1208046395 |
365 | H>P | No |
ClinGen gnomAD |
|
|
CA10164604 COSM1267691 rs763356224 |
366 | E>K | oesophagus [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA10164603 rs763356224 |
366 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs374991151 CA10164599 |
368 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411021754 rs1337190103 |
368 | R>W | No |
ClinGen TOPMed |
|
|
CA10164598 rs776791220 |
371 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1391992949 CA411021718 |
374 | S>G | No |
ClinGen gnomAD |
|
|
CA411021712 rs1165022155 |
374 | S>R | No |
ClinGen gnomAD |
|
|
rs777795932 CA411021704 |
375 | K>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 378 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1420826525 CA411021691 COSM1190409 |
378 | E>Q | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA411021657 rs1475526255 |
381 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA10164594 rs772268513 |
381 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA10164592 rs779791592 |
383 | C>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201185631 CA322839180 |
384 | E>A | No |
ClinGen 1000Genomes |
|
|
rs368664541 CA10164590 |
384 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756655665 CA10164588 |
385 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs756655665 CA411021601 |
385 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA10164589 rs200704154 |
385 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs763900688 CA411021591 |
386 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1032998 CA10164586 rs763900688 |
386 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751239002 CA10164587 |
386 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 387 | M>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411021532 rs1372161580 |
390 | D>E | No |
ClinGen gnomAD |
|
|
CA10164584 rs56242702 |
390 | D>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA10164583 rs201334248 |
391 | C>Y | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs781517278 CA10164582 |
393 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1216608720 CA411021478 |
394 | P>R | No |
ClinGen TOPMed |
|
|
rs776931738 CA10164581 |
394 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA10164580 rs771053413 |
395 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 395 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA322839102 rs1021519244 |
396 | T>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA411021461 rs1602208632 |
396 | T>P | No |
ClinGen Ensembl |
|
|
rs773337609 CA10164578 |
398 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1398104180 CA411021441 |
398 | D>Y | No |
ClinGen gnomAD |
|
|
CA10164577 rs202069268 |
399 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs202069268 CA322839083 |
399 | E>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1602208590 CA411021411 |
400 | C>G | No |
ClinGen Ensembl |
|
| TCGA novel | 400 | C>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs748346303 CA10164576 |
401 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs142326419 CA10164573 |
402 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1237678998 CA411021379 |
402 | R>H | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 403 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA10164572 rs780933985 |
403 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs1410245730 CA411021373 |
403 | I>V | No |
ClinGen TOPMed |
|
|
CA411021349 rs1008468686 |
404 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs757209177 CA10164571 COSM1229052 |
405 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751102347 CA10164570 |
406 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA411021325 rs1349097563 |
406 | T>N | No |
ClinGen gnomAD |
|
|
CA10164569 rs148750780 |
407 | L>M | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1483630546 CA411021313 |
407 | L>P | No |
ClinGen Ensembl |
|
|
CA10164567 rs752354129 |
409 | D>N | No |
ClinGen ExAC gnomAD |
|
|
COSM296137 CA411021238 rs1278453677 |
412 | Y>C | large_intestine Variant assessed as Somatic; 4.627e-05 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA411021194 rs765698746 CA10164566 |
417 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA411021182 rs1397847368 |
418 | S>C | No |
ClinGen TOPMed |
|
|
rs754214870 CA10164564 |
419 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA10164563 rs766862268 |
420 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs144296284 CA10164561 |
420 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144296284 CA411021171 |
420 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs144296284 CA10164562 |
420 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1283015213 CA411021139 |
423 | L>V | No |
ClinGen TOPMed |
|
|
CA10164560 rs141933151 |
424 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA322839009 rs544215479 |
428 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs769644425 CA10164557 |
429 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769644425 CA411021065 |
429 | Y>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745708615 CA10164556 |
431 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA411021035 rs1282955775 |
432 | M>V | No |
ClinGen gnomAD |
|
| TCGA novel | 433 | K>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs140094946 CA10164555 |
434 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411021001 rs1214825154 |
434 | E>K | No |
ClinGen gnomAD |
|
|
rs1225970527 CA411020952 |
437 | K>E | No |
ClinGen gnomAD |
|
|
rs1317335351 CA411020927 |
438 | E>D | No |
ClinGen TOPMed |
|
|
rs1345515761 CA411020859 |
443 | K>T | No |
ClinGen TOPMed |
|
|
CA10164531 rs778455199 |
446 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411020766 rs1487797556 |
446 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs570811760 CA10164529 |
447 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768512600 CA10164527 |
447 | Y>* | No |
ClinGen ExAC |
|
|
CA10164530 rs754634881 |
447 | Y>F | No |
ClinGen ExAC gnomAD |
|
|
rs147524998 CA10164526 |
449 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
rs754797507 CA322838875 |
450 | E>K | No |
ClinGen gnomAD |
|
|
CA411020673 rs1435498838 |
454 | K>E | No |
ClinGen TOPMed |
|
|
rs1009007713 CA322838871 |
454 | K>M | No |
ClinGen Ensembl |
|
|
rs1216049260 CA411020656 |
456 | K>Q | No |
ClinGen gnomAD |
|
|
rs902624927 CA322838869 |
459 | L>P | No |
ClinGen Ensembl |
|
|
rs1441511711 CA411020628 |
460 | E>A | No |
ClinGen gnomAD |
|
|
rs1396847548 CA411020625 |
460 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA10164522 rs768071277 |
460 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411020619 rs1329343562 |
461 | N>S | No |
ClinGen gnomAD |
|
|
CA411020610 rs1355273240 |
462 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs757757926 CA10164521 |
462 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1172781455 CA411020607 |
463 | Q>E | No |
ClinGen gnomAD |
|
|
CA411020591 rs763110174 |
465 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA10164518 rs763110174 |
465 | L>W | No |
ClinGen ExAC gnomAD |
|
|
CA322838845 rs796797440 |
468 | G>S | No |
ClinGen gnomAD |
|
|
rs367623576 CA10164515 |
469 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1480114669 CA411020556 |
471 | D>N | No |
ClinGen gnomAD |
|
|
rs773133932 CA10164514 |
472 | L>F | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 472 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411020539 rs1206182782 |
473 | S>* | No |
ClinGen gnomAD |
|
|
CA10164513 rs772174395 |
478 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA322838813 rs766206752 |
479 | R>G | No |
ClinGen gnomAD |
|
|
CA411041493 rs1474027194 |
479 | R>S | No |
ClinGen gnomAD |
|
|
CA411041486 rs1433730056 |
480 | L>F | No |
ClinGen TOPMed |
|
|
rs922917057 CA411041477 CA322868438 |
482 | W>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1486550770 CA411041467 |
483 | E>* | No |
ClinGen gnomAD |
|
|
rs200959980 CA322868434 |
483 | E>G | No |
ClinGen 1000Genomes TOPMed |
|
|
CA411041451 rs1602203020 |
485 | W>L | No |
ClinGen Ensembl |
|
|
rs1204502440 CA411041439 |
486 | M>I | No |
ClinGen gnomAD |
|
|
rs902166756 CA322868428 |
487 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA10164484 rs374892403 |
490 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411041419 rs374892403 |
490 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs541912807 CA10164483 |
490 | R>Q | Variant assessed as Somatic; 9.241e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs532889276 CA10164482 |
492 | I>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA411041402 rs1569158257 |
493 | V>I | No |
ClinGen Ensembl |
|
|
CA411041364 rs1602202867 |
498 | P>A | No |
ClinGen Ensembl |
|
|
rs1198425196 CA411041351 |
500 | N>D | No |
ClinGen gnomAD |
|
|
rs1318020335 CA411041345 |
500 | N>K | No |
ClinGen gnomAD |
|
|
CA10164477 rs779315121 |
501 | C>* | No |
ClinGen ExAC |
|
|
CA10164478 rs752859873 |
502 | D>A | No |
ClinGen ExAC |
|
|
CA10164476 rs779110168 |
503 | P>A | No |
ClinGen ExAC gnomAD |
|
|
COSM3740381 CA10164475 rs150727920 |
503 | P>L | liver [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA411041321 rs1459473579 |
504 | M>T | No |
ClinGen gnomAD |
|
|
CA411041313 rs1602202782 |
505 | V>G | No |
ClinGen Ensembl |
|
|
rs1198802941 CA411041307 |
506 | D>A | No |
ClinGen TOPMed |
|
|
CA411041310 rs1431993941 |
506 | D>N | No |
ClinGen TOPMed |
|
|
rs1478021768 CA411041301 |
507 | F>L | No |
ClinGen gnomAD |
|
|
rs761644326 CA10164472 |
510 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs189143195 CA10164471 |
510 | S>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs969618562 CA322868365 |
511 | W>* | No |
ClinGen Ensembl |
|
|
CA411041269 rs1479209947 |
511 | W>* | No |
ClinGen TOPMed |
|
|
rs764160758 CA10164470 |
512 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA411041249 rs1211737307 |
514 | I>T | No |
ClinGen gnomAD |
|
|
rs141191204 CA10164468 |
514 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs764680398 CA10164467 |
515 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759222648 CA10164466 |
516 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1320690104 CA411041238 |
516 | P>S | No |
ClinGen TOPMed |
|
|
CA10164464 rs770553732 |
517 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770553732 CA411041235 COSM1032994 |
517 | V>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA411041211 rs1328558165 |
520 | L>S | No |
ClinGen gnomAD |
|
| TCGA novel | 521 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411041189 rs1569158064 |
523 | I>L | No |
ClinGen Ensembl |
|
|
rs748553174 CA10164460 |
525 | D>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 526 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA322868310 rs1055309405 |
527 | L>V | No |
ClinGen TOPMed |
|
|
CA10164456 rs148213129 |
530 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1166949531 CA411041130 |
532 | L>V | No |
ClinGen gnomAD |
|
|
CA10164455 rs756286236 |
533 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs751412902 CA411041112 |
534 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1602201330 CA411041058 |
540 | N>T | No |
ClinGen Ensembl |
|
|
rs553829342 CA10164428 |
541 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA10164426 rs765754986 |
545 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs760404982 CA10164425 |
545 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA411041026 rs760404982 |
545 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1168010045 CA411041016 |
547 | P>S | No |
ClinGen gnomAD |
|
|
CA411041012 rs1446892768 |
548 | I>V | No |
ClinGen gnomAD |
|
|
CA411041001 rs1282952732 |
549 | H>P | No |
ClinGen gnomAD |
|
|
rs767937557 CA10164423 |
552 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1232273981 CA411040974 |
553 | H>Y | No |
ClinGen gnomAD |
|
|
rs370484334 CA10164422 |
555 | W>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1355876551 CA411040961 |
555 | W>R | No |
ClinGen gnomAD |
|
|
CA411040944 rs1602201112 |
557 | P>L | No |
ClinGen Ensembl |
|
|
CA411040949 rs1344472200 |
557 | P>S | No |
ClinGen gnomAD |
|
|
rs1458946811 CA411040943 |
558 | L>I | No |
ClinGen gnomAD |
|
|
CA10164420 rs769326596 |
559 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411040928 rs1164542420 |
560 | Q>E | No |
ClinGen gnomAD |
|
|
CA411040917 rs1475631387 |
561 | A>G | No |
ClinGen gnomAD |
|
|
CA10164418 rs556056607 COSM399432 |
562 | R>Q | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA411040914 rs373604642 |
562 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA10164417 rs769725225 |
563 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1243261714 CA411040910 |
563 | L>V | No |
ClinGen gnomAD |
|
|
rs746109562 CA10164416 |
564 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1334997670 CA411040890 |
566 | L>P | No |
ClinGen gnomAD |
|
|
CA411040875 rs1158739535 |
568 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1602200908 CA411040879 |
568 | S>P | No |
ClinGen Ensembl |
|
|
CA411040867 rs1602200859 |
570 | I>L | No |
ClinGen Ensembl |
|
|
rs778652797 CA10164412 |
571 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1163273261 CA411040859 COSM1032993 |
571 | R>H | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs754927488 CA10164411 |
572 | S>G | No |
ClinGen ExAC |
|
|
rs1437162896 CA411040847 |
573 | K>E | No |
ClinGen gnomAD |
|
|
rs371301763 CA10164410 |
575 | S>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 575 | S>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1325259038 CA411040830 |
576 | S>G | No |
ClinGen gnomAD |
|
| TCGA novel | 577 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779618429 CA10164409 |
581 | W>* | No |
ClinGen ExAC |
|
|
rs1602200720 CA411040785 |
582 | H>P | No |
ClinGen Ensembl |
|
|
CA411040788 rs1305389732 |
582 | H>Y | No |
ClinGen TOPMed |
|
|
CA10164408 rs755519326 |
584 | S>G | No |
ClinGen ExAC |
|
|
CA411040767 rs1409822853 |
585 | D>N | No |
ClinGen gnomAD |
|
|
rs767142439 CA10164406 |
589 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1287639714 CA411040691 |
596 | K>E | No |
ClinGen TOPMed |
|
| TCGA novel | 596 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145549879 CA10164404 |
600 | T>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA10164403 rs764507407 |
601 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA411040657 rs1266910751 |
601 | P>S | No |
ClinGen gnomAD |
|
|
CA322867826 rs377694383 |
604 | W>C | No |
ClinGen ESP TOPMed |
|
|
rs1273388066 CA411040638 |
604 | W>R | No |
ClinGen gnomAD |
|
|
rs1316340753 CA411040624 |
606 | A>T | No |
ClinGen gnomAD |
|
|
CA10164398 rs776737812 |
608 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759596493 CA10164399 |
608 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA10164400 rs769935255 |
608 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1248335632 CA411040603 |
609 | V>I | No |
ClinGen gnomAD |
|
|
CA411040584 rs1296712137 |
611 | N>K | No |
ClinGen gnomAD |
|
|
rs954116018 CA411040578 |
612 | I>K | No |
ClinGen gnomAD |
|
|
rs954116018 CA322867802 |
612 | I>T | No |
ClinGen gnomAD |
|
|
CA10164396 rs747182666 |
614 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1569156381 CA411040536 |
617 | G>E | No |
ClinGen Ensembl |
|
|
CA322866942 rs1036501522 |
624 | V>I | No |
ClinGen TOPMed |
|
|
rs1484593881 CA411040485 |
625 | I>V | No |
ClinGen gnomAD |
|
|
rs373450619 CA10164378 |
626 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10164376 rs772266873 |
627 | P>S | No |
ClinGen ExAC gnomAD |
|
| rs749918134 | 628 | H>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs775324967 CA10164372 |
629 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411040452 rs769669754 |
630 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769669754 CA10164371 |
630 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290484647 CA411040446 |
630 | Q>H | No |
ClinGen gnomAD |
|
|
rs182511018 CA10164369 |
632 | M>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1005690220 CA322866923 |
633 | D>E | No |
ClinGen Ensembl |
|
|
CA10164368 rs756763345 |
636 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411040392 rs1165381329 |
638 | V>M | No |
ClinGen gnomAD |
|
|
rs1398312664 CA411040382 |
639 | I>T | No |
ClinGen gnomAD |
|
|
rs1383366144 CA638783190 |
640 | D>E | No |
ClinGen gnomAD |
|
|
rs1452514302 CA411040334 |
645 | I>S | No |
ClinGen gnomAD |
|
|
rs1288785984 CA411040339 |
645 | I>V | No |
ClinGen gnomAD |
|
|
CA10164366 rs777629357 |
647 | V>L | No |
ClinGen ExAC |
|
|
CA411040317 rs758124053 |
648 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758124053 CA10164365 |
648 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753047577 CA411040285 |
654 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164364 COSM3842370 rs753047577 |
654 | L>V | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs755467728 CA10164362 |
657 | H>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164363 rs765584384 |
657 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA10164361 rs754302773 |
661 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs766457779 CA10164360 |
662 | W>* | No |
ClinGen ExAC gnomAD |
|
|
rs760800786 CA10164359 |
663 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411040192 rs1344748963 |
665 | V>G | No |
ClinGen gnomAD |
|
|
CA411040197 rs1206386346 |
665 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA322866676 rs894543435 |
667 | C>R | No |
ClinGen Ensembl |
|
|
CA10164332 rs759436489 |
667 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1446808764 CA411040178 |
668 | S>P | No |
ClinGen TOPMed |
|
|
CA411040170 rs1234170776 |
669 | W>S | No |
ClinGen gnomAD |
|
|
CA411040160 rs1569155848 |
670 | L>P | No |
ClinGen Ensembl |
|
|
CA10164331 rs375290632 |
671 | S>G | No |
ClinGen ESP ExAC gnomAD |
|
|
CA10164330 rs771035863 |
671 | S>N | No |
ClinGen ExAC |
|
|
CA411040145 rs1274882701 |
672 | N>K | No |
ClinGen gnomAD |
|
|
CA10164329 rs763912440 |
672 | N>L | No |
ClinGen ExAC |
|
|
CA10164328 rs760636378 |
674 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs960208140 CA322866670 |
676 | Y>C | No |
ClinGen TOPMed gnomAD |
|
| rs762805603 | 678 | E>missing | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145696489 CA10164326 |
678 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA322866666 rs755011208 |
680 | T>S | No |
ClinGen Ensembl |
|
|
rs747766013 CA10164324 |
681 | K>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs149764032 CA10164322 |
688 | S>L | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1305129818 CA411040024 |
689 | M>I | No |
ClinGen gnomAD |
|
|
rs1174272867 CA411040028 |
689 | M>T | No |
ClinGen TOPMed |
|
|
rs1569155764 CA411040010 |
691 | S>L | No |
ClinGen Ensembl |
|
|
CA411040014 rs1569155767 |
691 | S>P | No |
ClinGen Ensembl |
|
|
rs1468651315 CA411039999 |
693 | Q>* | No |
ClinGen gnomAD |
|
|
rs1363504775 CA411039982 |
696 | A>T | No |
ClinGen gnomAD |
|
|
CA10164320 rs780374673 |
698 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA411039949 rs1255789204 |
701 | K>* | No |
ClinGen gnomAD |
|
|
CA411039932 rs150843922 |
703 | K>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs150843922 CA10164318 |
703 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs150843922 CA10164319 |
703 | K>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10164316 rs781280511 |
713 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1278730515 CA411039860 |
713 | R>W | No |
ClinGen gnomAD |
|
|
rs190854539 CA10164315 |
714 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed |
|
|
CA10164314 COSM1032992 rs190854539 |
714 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed |
|
CA411039838 rs1228601875 |
717 | S>F | No |
ClinGen gnomAD |
|
|
rs908459511 CA322866639 |
718 | N>K | No |
ClinGen gnomAD |
|
|
rs939900288 CA322866641 |
718 | N>S | No |
ClinGen TOPMed |
|
|
CA10164312 rs140942811 |
719 | V>I | No |
ClinGen ESP ExAC gnomAD |
|
|
CA411039648 rs1416391788 |
721 | A>T | No |
ClinGen gnomAD |
|
|
rs747177089 CA10164296 |
721 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA322866025 rs1048479505 |
722 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1048479505 CA322866023 |
722 | Y>F | No |
ClinGen TOPMed gnomAD |
|
|
CA411039629 CA411039627 rs1188583600 |
723 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
CA10164295 rs777697682 |
725 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 726 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1250827445 CA411039581 |
727 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs371455445 CA322866004 |
728 | R>L | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs371455445 CA322866006 |
728 | R>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs374879389 CA10164293 |
728 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA411039573 rs1212768097 |
729 | E>K | No |
ClinGen gnomAD |
|
|
rs753163860 CA322866001 |
731 | I>T | No |
ClinGen gnomAD |
|
|
CA10164292 rs766303217 |
734 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA322865988 rs367681837 |
736 | H>Y | No |
ClinGen ESP TOPMed |
|
|
rs147683514 CA10164289 |
737 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10164286 rs376300046 |
739 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
rs761644057 CA10164287 |
739 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs371046387 CA10164285 |
741 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs915576147 CA322865955 |
742 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
rs201235822 CA10164283 |
743 | F>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA10164280 rs746269405 |
747 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs776851933 CA10164279 |
748 | M>T | No |
ClinGen ExAC gnomAD |
|
|
CA10164275 rs758506991 |
752 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs777944340 CA10164276 |
752 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA322865914 rs1047124063 |
753 | E>G | No |
ClinGen Ensembl |
|
|
rs986593060 CA322865908 |
754 | A>T | No |
ClinGen gnomAD |
|
|
rs1300594381 CA411039303 |
754 | A>V | No |
ClinGen gnomAD |
|
|
rs779320513 CA10164273 |
755 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs140083093 CA10164274 |
755 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411039266 rs1296640899 CA411039262 |
757 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA10164272 rs147941626 |
758 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA10164268 rs148804829 |
764 | V>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs757223429 CA10164269 |
764 | V>M | Variant assessed as Somatic; 0.0001386 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs763682219 CA10164267 |
765 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs144403503 CA10164265 |
766 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1472174887 CA411039187 |
766 | A>V | No |
ClinGen gnomAD |
|
|
CA10164264 rs764932526 |
767 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs377384093 CA322865855 |
768 | S>F | No |
ClinGen ESP TOPMed |
|
|
rs1207214131 CA411039178 |
768 | S>P | No |
ClinGen gnomAD |
|
|
CA411039171 rs1569154234 |
769 | V>E | No |
ClinGen Ensembl |
|
|
rs1484625760 CA411039166 |
770 | P>S | No |
ClinGen gnomAD |
|
|
CA411039160 rs1255509340 |
771 | M>L | No |
ClinGen gnomAD |
|
|
CA411039161 rs1255509340 |
771 | M>V | No |
ClinGen gnomAD |
|
|
rs1238566452 CA411039150 |
772 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA411039140 rs1210969044 |
773 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs759171870 CA10164263 |
773 | F>V | No |
ClinGen ExAC |
|
|
CA411039128 rs1314023230 |
775 | D>Y | No |
ClinGen gnomAD |
|
|
CA411039096 rs1375012861 |
779 | T>I | No |
ClinGen TOPMed |
|
|
CA411039082 rs1314784321 |
781 | A>V | No |
ClinGen TOPMed |
|
|
rs1032637543 CA322865839 |
783 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs773643884 CA10164259 |
790 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA10164257 rs574318611 |
791 | V>I | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1401985128 CA411039003 |
793 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 795 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769013718 CA10164255 |
796 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs781071325 CA10164253 |
797 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA411038966 rs756952141 |
798 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164252 rs756952141 |
798 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164251 rs3177310 |
801 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
|
CA10164249 rs758325865 |
806 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1024086601 CA322865772 COSM1415370 |
806 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
rs752259502 CA10164248 |
808 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA10164245 rs753388584 |
811 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA322865743 rs374904559 |
812 | D>N | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1314136444 CA411038869 |
813 | R>L | No |
ClinGen gnomAD |
|
|
rs1314136444 CA411038871 |
813 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs773624109 CA10164242 |
813 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA10164241 rs772765613 |
814 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1242689323 CA411038866 |
814 | G>R | No |
ClinGen TOPMed |
|
| TCGA novel | 815 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145968579 CA10164239 |
818 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA411038843 rs145968579 |
818 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1394284432 CA411038835 |
819 | Q>P | No |
ClinGen TOPMed |
|
|
CA411038824 rs749547123 |
821 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA10164237 rs749547123 COSM1032990 |
821 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs780188579 CA10164236 |
823 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1367621707 CA411038784 |
826 | P>L | No |
ClinGen gnomAD |
|
| TCGA novel | 826 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA411038778 rs1165404685 |
827 | T>I | No |
ClinGen gnomAD |
|
|
rs1165404685 CA411038780 |
827 | T>S | No |
ClinGen gnomAD |
|
|
rs1246289788 CA411038768 |
829 | L>P | No |
ClinGen gnomAD |
|
|
rs1250209712 CA411038724 |
835 | M>I | No |
ClinGen TOPMed gnomAD |
|
|
CA411038726 rs1328642144 |
835 | M>T | No |
ClinGen TOPMed |
|
|
CA411038721 rs1208274522 |
836 | A>T | No |
ClinGen gnomAD |
|
|
CA10164232 rs758342275 |
837 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758342275 CA411038712 |
837 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q9UBB9
Functions
9 GO annotations of cellular component
| Name | Definition |
|---|---|
| catalytic step 2 spliceosome | A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. |
| chromosome, telomeric region | The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres). |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| extracellular matrix | A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues. |
| nuclear speck | A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| spliceosomal complex | Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA. |
| U2-type post-mRNA release spliceosomal complex | A spliceosomal complex that is formed following the release of the spliced product from the post-spliceosomal complex and contains the excised intron and the U2, U5 and U6 snRNPs. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| nucleic acid binding | Binding to a nucleic acid. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| biomineral tissue development | Formation of hard tissues that consist mainly of inorganic compounds, and also contain a small amounts of organic matrices that are believed to play important roles in their formation. |
| mRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. |
| negative regulation of DNA ligase activity | Any process that stops, prevents or reduces the frequency, rate or extent of DNA ligase activity. |
| negative regulation of double-strand break repair via nonhomologous end joining | Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair via nonhomologous end joining. |
| negative regulation of protein binding | Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding. |
| negative regulation of protein-containing complex assembly | Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly. |
| protection from non-homologous end joining at telomere | A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse. |
| RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |
| spliceosomal complex disassembly | Disassembly of a spliceosomal complex with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. In cis splicing, the other product is the excised sequence, often a single intron, in a lariat structure. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q06411 | SPP382 | Pre-mRNA-splicing factor SPP382 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | PR |
| Q9ERA6 | Tfip11 | Tuftelin-interacting protein 11 | Mus musculus (Mouse) | PR |
| Q9SLC6 | STIPL2 | Septin and tuftelin-interacting protein 1 homolog 2 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSLSHLYRDG | EGRIDDDDDE | RENFEITDWD | LQNEFNPNRQ | RHWQTKEEAT | YGVWAERDSD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DERPSFGGKR | ARDYSAPVNF | ISAGLKKGAA | EEAELEDSDD | EEKPVKQDDF | PKDFGPRKLK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TGGNFKPSQK | GFAGGTKSFM | DFGSWERHTK | GIGQKLLQKM | GYVPGRGLGK | NAQGIINPIE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AKQRKGKGAV | GAYGSERTTQ | SMQDFPVVDS | EEEAEEEFQK | ELSQWRKDPS | GSKKKPKYSY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KTVEELKAKG | RISKKLTAPQ | KELSQVKVID | MTGREQKVYY | SYSQISHKHN | VPDDGLPLQS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QQLPQSGKEA | KAPGFALPEL | EHNLQLLIDL | TEQEIIQNDR | QLQYERDMVV | NLFHELEKMT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| EVLDHEERVI | SNLSKVLEMV | EECERRMQPD | CSNPLTLDEC | ARIFETLQDK | YYEEYRMSDR |
| 430 | 440 | 450 | 460 | 470 | 480 |
| VDLAVAIVYP | LMKEYFKEWD | PLKDCTYGTE | IISKWKSLLE | NDQLLSHGGQ | DLSADAFHRL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| IWEVWMPFVR | NIVTQWQPRN | CDPMVDFLDS | WVHIIPVWIL | DNILDQLIFP | KLQKEVENWN |
| 550 | 560 | 570 | 580 | 590 | 600 |
| PLTDTVPIHS | WIHPWLPLMQ | ARLEPLYSPI | RSKLSSALQK | WHPSDSSAKL | ILQPWKDVFT |
| 610 | 620 | 630 | 640 | 650 | 660 |
| PGSWEAFMVK | NIVPKLGMCL | GELVINPHQQ | HMDAFYWVID | WEGMISVSSL | VGLLEKHFFP |
| 670 | 680 | 690 | 700 | 710 | 720 |
| KWLQVLCSWL | SNSPNYEEIT | KWYLGWKSMF | SDQVLAHPSV | KDKFNEALDI | MNRAVSSNVG |
| 730 | 740 | 750 | 760 | 770 | 780 |
| AYMQPGAREN | IAYLTHTERR | KDFQYEAMQE | RREAENMAQR | GIGVAASSVP | MNFKDLIETK |
| 790 | 800 | 810 | 820 | 830 | |
| AEEHNIVFMP | VIGKRHEGKQ | LYTFGRIVIY | IDRGVVFVQG | EKTWVPTSLQ | SLIDMAK |