Q9SX99
Gene name |
OSB1 (At1g47720, F16N3.2, T2E6.21) |
Protein name |
Protein OSB1, mitochondrial |
Names |
Organellar single-stranded DNA-binding protein 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G47720 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9SX99
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9SX99-F1 | Predicted | AlphaFoldDB |
35 variants for Q9SX99
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH14252183 | 2 | N>K | No | 1000Genomes | |
| tmp_1_17562826_G_T | 12 | Q>K | No | 1000Genomes | |
| ENSVATH01312983 | 17 | Q>K | No | 1000Genomes | |
| ENSVATH04894706 | 17 | Q>R | No | 1000Genomes | |
| ENSVATH01312982 | 21 | S>Y | No | 1000Genomes | |
| tmp_1_17562793_G_T | 23 | P>T | No | 1000Genomes | |
| ENSVATH01312980 | 24 | K>N | No | 1000Genomes | |
| ENSVATH01312979 | 25 | S>P | No | 1000Genomes | |
| ENSVATH04894704 | 51 | K>R | No | 1000Genomes | |
| ENSVATH01312978 | 55 | V>M | No | 1000Genomes | |
| ENSVATH00084726 | 64 | V>I | No | 1000Genomes | |
| tmp_1_17562655_G_C | 69 | Q>E | No | 1000Genomes | |
| tmp_1_17562626_G_C | 78 | F>L | No | 1000Genomes | |
| ENSVATH04894701 | 89 | P>S | No | 1000Genomes | |
| tmp_1_17562376_G_T | 104 | D>E | No | 1000Genomes | |
| ENSVATH00084721 | 105 | A>E | No | 1000Genomes | |
| ENSVATH00084720 | 112 | A>V | No | 1000Genomes | |
| tmp_1_17562294_T_C | 132 | S>G | No | 1000Genomes | |
| tmp_1_17562276_T_A | 138 | S>C | No | 1000Genomes | |
| ENSVATH13421283 | 143 | D>E | No | 1000Genomes | |
| tmp_1_17562022_T_G | 171 | K>Q | No | 1000Genomes | |
| tmp_1_17561741_A_G | 187 | Y>H | No | 1000Genomes | |
| ENSVATH14252177 | 192 | F>L | No | 1000Genomes | |
| ENSVATH14252176 | 196 | P>Q | No | 1000Genomes | |
| tmp_1_17561678_T_A | 208 | N>Y | No | 1000Genomes | |
| ENSVATH01312971 | 211 | Q>H | No | 1000Genomes | |
| ENSVATH14252175 | 212 | P>L | No | 1000Genomes | |
| tmp_1_17561656_T_C | 215 | K>R | No | 1000Genomes | |
| ENSVATH04894689 | 236 | R>G | No | 1000Genomes | |
| ENSVATH13421263 | 244 | N>T | No | 1000Genomes | |
| ENSVATH01312970 | 245 | R>C | No | 1000Genomes | |
| ENSVATH04894688 | 245 | R>H | No | 1000Genomes | |
| ENSVATH04894687 | 253 | R>L | No | 1000Genomes | |
| ENSVATH00084715 | 253 | R>S | No | 1000Genomes | |
| ENSVATH04894686 | 254 | R>L | No | 1000Genomes |
No associated diseases with Q9SX99
No regional properties for Q9SX99
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9SX99 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| apoplast | The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it. |
| mitochondrial nucleoid | The region of a mitochondrion to which the DNA is confined. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| nucleoid | The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| single-stranded DNA binding | Binding to single-stranded DNA. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| mitochondrial DNA replication | The process in which new strands of DNA are synthesized in the mitochondrion. |
| mitochondrial genome maintenance | The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome. |
| negative regulation of DNA recombination | Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombination. |
| positive regulation of helicase activity | Any process that activates or increases the activity of a helicase. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9FYJ2 | OSB4 | Protein OSB4, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GWJ4 | OSB3 | Protein OSB3, chloroplastic/mitochondrial | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8GXH3 | OSB2 | Protein OSB2, chloroplastic | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNTFFKLGSL | IQRTASQISS | SFPKSRFFSD | GESAVYHHAR | LFKKPLSTKL | KFNLVNSVSL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MGFVDRSIQV | MNTGPDRFGV | FTILRVKDPL | NPNRSFRISL | RMWDAMARTC | IAHLKLNDHI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LVSGRLESYS | KSSSDVYSGL | NLDYQVKVAE | VNYVAAPPSH | VLDSQISKNP | KTKTEDDIEE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SKKDEIYLWQ | VFFSNPYDWW | DNRRNKKNPK | QPDFKHKDTG | EALWLCSDLP | DWITRRLELF |
| 250 | 260 | ||||
| DQKNRFYDEE | KTRRDRLSDY | I |