Q9NPZ5
Gene name |
B3GAT2 (GLCATS, KIAA1963) |
Protein name |
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 |
Names |
C1q/MBL/SPA receptor, C1qR, C1qR(p), C1qRp, CDw93, Complement component 1 q subcomponent receptor 1, Matrix-remodeling-associated protein 4, Beta-1,3-glucuronyltransferase 2, GlcAT-D, UDP-glucuronosyltransferase S, GlcAT-S, Glucuronosyltransferase S |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:135152 |
EC number |
2.4.1.135: Hexosyltransferases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for Q9NPZ5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2D0J | X-ray | 200 A | A/B/C/D | 78-323 | PDB |
| AF-Q9NPZ5-F1 | Predicted | AlphaFoldDB |
328 variants for Q9NPZ5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs867164665 CA141275917 |
3 | S>P | No |
ClinGen Ensembl |
|
|
rs906078505 CA141275915 |
4 | A>E | No |
ClinGen gnomAD |
|
|
CA141275916 rs1002214080 |
4 | A>T | No |
ClinGen gnomAD |
|
|
CA364814439 rs1450902438 |
7 | T>A | No |
ClinGen gnomAD |
|
|
rs1325185498 CA364814429 |
8 | R>L | No |
ClinGen gnomAD |
|
|
rs1319985521 CA364814409 |
11 | I>S | No |
ClinGen gnomAD |
|
| TCGA novel | 14 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1162991706 CA364814349 |
20 | I>S | No |
ClinGen gnomAD |
|
|
rs755345165 CA3884950 |
21 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 24 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364814313 rs751938366 |
25 | V>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884948 rs751938366 |
25 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364814300 rs766587551 |
27 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA3884947 rs766587551 |
27 | T>M | No |
ClinGen ExAC gnomAD |
|
|
rs1188647671 CA364814298 |
28 | R>C | No |
ClinGen gnomAD |
|
|
rs762681415 CA3884946 |
28 | R>H | No |
ClinGen ExAC gnomAD |
|
|
CA3884945 rs772803317 |
30 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1451816986 CA364814281 |
31 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA141275913 rs764758181 |
32 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776603346 CA3884943 |
32 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA3884942 rs776603346 |
32 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA141275912 rs776603346 |
32 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA3884944 rs764758181 |
32 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768628314 CA3884941 |
33 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs1297459149 CA364814262 |
35 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs775357510 CA3884939 |
35 | T>I | No |
ClinGen ExAC |
|
|
CA364814253 rs1367497656 |
36 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA364814247 rs1323932222 |
37 | R>H | No |
ClinGen gnomAD |
|
|
CA364814245 rs1350677261 |
38 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA364814246 rs1350677261 |
38 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs771703237 CA3884938 |
39 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1274291271 CA364814226 |
40 | F>L | No |
ClinGen TOPMed |
|
|
CA364814221 rs1369911793 |
41 | S>C | No |
ClinGen gnomAD |
|
|
rs1369911793 CA364814220 |
41 | S>F | No |
ClinGen gnomAD |
|
|
CA364814224 rs1344226062 |
41 | S>P | No |
ClinGen TOPMed |
|
|
CA364814207 rs1451232846 |
43 | Y>* | No |
ClinGen gnomAD |
|
|
rs1169091476 CA364814211 |
43 | Y>D | No |
ClinGen gnomAD |
|
|
CA364814200 rs1214924443 |
44 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA3884937 rs778098066 |
45 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3884936 rs778098066 |
45 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA364814195 rs1190109024 |
46 | G>S | No |
ClinGen gnomAD |
|
|
CA3884935 rs756301520 |
46 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1487074443 CA364814190 |
47 | R>C | No |
ClinGen gnomAD |
|
|
rs1369992157 CA364814184 |
48 | G>R | No |
ClinGen Ensembl |
|
|
rs1436380989 CA364814177 |
49 | G>S | No |
ClinGen gnomAD |
|
|
rs755504105 CA3884932 |
49 | G>V | No |
ClinGen ExAC gnomAD |
|
|
TCGA novel rs758650135 CA3884929 |
50 | A>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC gnomAD NCI-TCGA |
|
rs758650135 CA141275910 |
50 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA364814170 rs1301418576 |
50 | A>V | No |
ClinGen gnomAD |
|
|
CA364814169 rs200678168 |
51 | R>* | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA3884928 rs200678168 |
51 | R>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA364814167 rs1368581480 |
51 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA364814158 rs554377076 |
53 | P>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs554377076 CA3884927 |
53 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3884925 rs765259453 |
54 | L>P | No |
ClinGen ExAC |
|
|
rs765259453 CA364814150 |
54 | L>R | No |
ClinGen ExAC |
|
|
rs1369775534 CA364814146 |
55 | R>H | No |
ClinGen gnomAD |
|
|
rs760672632 CA3884922 |
56 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs775237359 CA3884921 |
57 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1373488037 CA364814136 |
57 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA3884920 rs771928642 |
58 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA364814125 rs1251628445 |
59 | P>A | No |
ClinGen gnomAD |
|
|
rs535966421 CA141275907 |
61 | H>Y | No |
ClinGen 1000Genomes |
|
|
CA3884916 rs748304217 |
62 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781346844 CA3884915 |
64 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884914 rs768571781 |
67 | N>K | No |
ClinGen ExAC |
|
|
rs1582407068 CA364814072 |
67 | N>S | No |
ClinGen Ensembl |
|
|
rs965833167 CA141275906 |
68 | Q>L | No |
ClinGen Ensembl |
|
|
CA141275905 rs907659442 |
69 | S>P | No |
ClinGen Ensembl |
|
|
rs747583290 CA3884913 |
70 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA141275904 rs995151563 |
70 | R>P | No |
ClinGen TOPMed |
|
|
rs747583290 CA364814057 |
70 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs780395953 CA3884912 |
71 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3884910 rs750778011 |
72 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364814038 rs778605827 |
73 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778605827 CA3884909 |
73 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs568523673 CA3884908 |
74 | Q>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs753427344 CA3884907 |
75 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364814027 rs763680241 |
75 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3884906 rs763680241 |
75 | P>R | No |
ClinGen ExAC gnomAD |
|
|
rs753427344 CA364814030 |
75 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 78 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752716799 CA3884904 |
79 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs767334400 CA3884902 |
80 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1255840165 CA364813998 |
80 | P>R | No |
ClinGen TOPMed |
|
|
CA141275902 rs767334400 |
80 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs556286650 CA141275901 |
82 | I>V | No |
ClinGen 1000Genomes TOPMed |
|
|
rs759462366 CA3884900 |
83 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1181840325 CA364813974 |
84 | A>D | No |
ClinGen gnomAD |
|
|
rs1181840325 CA364813972 |
84 | A>V | No |
ClinGen gnomAD |
|
|
CA141275900 rs896531028 |
85 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 88 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762149503 CA3884897 |
88 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776679570 CA3884895 |
89 | Y>H | No |
ClinGen ExAC TOPMed |
|
|
CA3884894 rs201430647 |
90 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA141275899 rs534598813 |
91 | R>C | No |
ClinGen Ensembl |
|
|
rs951776976 CA141275898 |
91 | R>L | No |
ClinGen gnomAD |
|
|
rs951776976 CA364813931 |
91 | R>P | No |
ClinGen gnomAD |
|
|
rs372158787 CA3884891 |
92 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3884893 rs372158787 |
92 | P>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372158787 CA3884892 |
92 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364813926 rs1044005381 |
93 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1044005381 CA141275897 |
93 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA3884888 rs757565890 |
94 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA3884887 rs753554542 |
95 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA3884886 rs777256563 |
97 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA141275894 rs759422862 |
100 | R>C | No |
ClinGen Ensembl |
|
|
CA141275895 rs759422862 |
100 | R>G | No |
ClinGen Ensembl |
|
|
rs755698058 CA3884884 |
100 | R>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA364813878 rs1276128745 |
101 | L>P | No |
ClinGen TOPMed |
|
|
CA3884882 rs767627778 |
102 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1342036540 CA364813874 |
102 | A>V | No |
ClinGen TOPMed |
|
|
CA364813862 rs1424959405 |
104 | T>A | No |
ClinGen gnomAD |
|
|
CA364813858 rs1416504952 |
104 | T>M | No |
ClinGen gnomAD |
|
|
CA364813844 rs1186788828 |
106 | R>L | No |
ClinGen gnomAD |
|
|
rs1248697412 CA364813821 |
110 | Q>* | No |
ClinGen gnomAD |
|
|
CA364813803 rs766309638 |
112 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1487623955 CA364813808 |
112 | H>Y | No |
ClinGen gnomAD |
|
|
rs762810318 CA3884878 |
113 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs764212379 CA3884877 |
114 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764212379 COSM421249 CA3884876 |
114 | I>V | urinary_tract [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs775439822 CA3884874 |
115 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs376563227 CA364813789 |
115 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364813784 rs1365360758 |
116 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA364813785 rs1365360758 |
116 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs143511495 CA3884873 |
117 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs746394122 CA3884872 |
118 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs774796873 CA3884871 |
119 | A>E | No |
ClinGen ExAC gnomAD |
|
|
rs1458696838 CA364813755 |
120 | A>V | No |
ClinGen gnomAD |
|
|
CA3884868 rs777538824 |
121 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 121 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1390935512 CA364813744 |
122 | R>L | No |
ClinGen gnomAD |
|
|
CA364813736 rs747768660 |
123 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780861676 CA364813735 |
124 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1266864918 CA364813733 |
124 | E>A | No |
ClinGen gnomAD |
|
|
CA364813734 rs780861676 |
124 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs780861676 CA3884865 |
124 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs373218616 CA3884863 |
125 | L>Q | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
CA364813727 rs1210249959 |
125 | L>V | No |
ClinGen gnomAD |
|
|
rs751590012 CA3884861 |
126 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs766397393 CA3884860 |
127 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA3884858 rs370336662 |
128 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA364813711 rs1404142377 |
128 | R>H | No |
ClinGen TOPMed |
|
|
rs1404142377 CA364813709 |
128 | R>L | No |
ClinGen TOPMed |
|
|
CA3884859 rs370336662 |
128 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1299249511 CA364813708 |
129 | F>I | No |
ClinGen gnomAD |
|
|
rs760823778 CA3884856 |
131 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765020213 CA3884857 |
131 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA364813692 rs760823778 |
131 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771414127 CA3884851 |
132 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884852 rs771414127 |
132 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884853 rs771414127 |
132 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364813689 rs1429732689 |
133 | A>T | No |
ClinGen gnomAD |
|
|
CA3884850 rs112409269 |
133 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747788346 CA3884847 CA364813684 |
134 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1199915490 CA364813669 |
136 | P>L | No |
ClinGen gnomAD |
|
|
rs1053255527 CA141275891 |
137 | S>G | No |
ClinGen Ensembl |
|
|
rs1181175419 CA364813660 |
138 | T>A | No |
ClinGen gnomAD |
|
|
rs1483838916 CA364813656 |
138 | T>I | No |
ClinGen TOPMed |
|
|
CA3884842 rs758276244 |
139 | H>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs879653030 CA141275890 |
141 | H>Q | No |
ClinGen Ensembl |
|
|
CA3884841 rs750320042 |
142 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884840 rs764968027 |
143 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs752952453 CA3884838 |
146 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs767702737 CA3884837 |
146 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1175543237 CA364813588 |
150 | R>W | No |
ClinGen TOPMed |
|
|
rs1351684850 CA364813577 |
152 | G>R | No |
ClinGen gnomAD |
|
|
rs1351684850 CA364813578 |
152 | G>W | No |
ClinGen gnomAD |
|
|
CA364813572 rs1394779972 |
153 | L>M | No |
ClinGen gnomAD |
|
|
rs1399780826 CA364813569 |
153 | L>P | No |
ClinGen TOPMed |
|
|
CA364813562 rs1401641105 |
154 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1401641105 CA364813563 |
154 | P>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1331577865 CA364813559 |
155 | R>C | No |
ClinGen TOPMed |
|
|
CA364813552 rs1002276626 |
156 | A>D | No |
ClinGen TOPMed |
|
|
CA141275887 rs1002276626 |
156 | A>V | No |
ClinGen TOPMed |
|
|
rs773719748 CA141275886 |
157 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884832 rs773719748 |
157 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884833 rs773719748 |
157 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762215470 CA3884830 |
159 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA141275885 rs983222335 |
159 | Q>H | No |
ClinGen gnomAD |
|
|
rs951809246 CA141275884 |
160 | R>G | No |
ClinGen gnomAD |
|
|
rs1185378404 CA364813531 |
160 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1185378404 CA364813529 |
160 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA364813527 rs1199557412 |
161 | N>D | No |
ClinGen TOPMed |
|
|
CA364813522 rs1441764337 |
161 | N>K | No |
ClinGen gnomAD |
|
|
rs1256314846 CA364813505 |
164 | L>H | No |
ClinGen gnomAD |
|
|
rs768419572 CA141275883 |
165 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884828 rs768419572 |
165 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 165 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 166 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746595710 CA3884827 |
168 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746595710 CA364813480 |
168 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884825 rs771566480 |
173 | H>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364813436 rs1334945653 |
174 | Q>R | No |
ClinGen gnomAD |
|
|
rs745827101 CA3884824 |
175 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1457935459 CA364813420 |
177 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA3884822 rs778874580 |
178 | P>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs757048328 CA3884821 |
180 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1368913428 CA364813396 |
181 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs890603320 CA141275881 |
181 | L>P | No |
ClinGen TOPMed |
|
|
rs753613802 CA3884820 |
182 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781459405 CA3884819 |
183 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1554218657 CA3884816 |
184 | A>S | No |
ClinGen Ensembl |
|
|
rs758035011 CA3884814 |
185 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751723321 CA3884815 |
185 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs750941214 CA364813362 |
186 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA364813350 rs1316312636 |
188 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA364813340 rs1169131005 |
189 | T>S | No |
ClinGen gnomAD |
|
|
CA364813326 rs1248775136 |
191 | S>T | No |
ClinGen gnomAD |
|
|
rs1363165645 CA364813313 |
193 | E>G | No |
ClinGen gnomAD |
|
|
rs1266183025 CA364813292 |
196 | Q>R | No |
ClinGen TOPMed |
|
|
CA3884793 rs368880277 |
198 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750513549 CA3884792 |
199 | R>* | Variant assessed as Somatic; 4.882e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs759621574 CA3884791 |
199 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759621574 CA3884790 |
199 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776621778 CA3884787 |
202 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM403829 CA364810010 rs1251670929 |
202 | R>H | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs1251670929 CA364810012 |
202 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA3884785 rs767180832 |
203 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs867463178 CA141268339 |
205 | S>F | No |
ClinGen Ensembl |
|
|
rs773915976 CA3884783 |
206 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs943853919 CA141268338 |
207 | W>* | No |
ClinGen TOPMed gnomAD |
|
|
CA364809979 rs943853919 |
207 | W>C | No |
ClinGen TOPMed gnomAD |
|
|
rs770367885 CA3884782 |
209 | V>L | No |
ClinGen ExAC gnomAD |
|
|
CA3884781 rs749246454 |
210 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs1345724311 CA364809967 |
210 | G>S | No |
ClinGen TOPMed |
|
|
CA364809951 rs1319799592 |
213 | G>S | No |
ClinGen TOPMed |
|
|
rs538444071 CA3884779 |
213 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1582360276 CA364809936 |
215 | R>L | No |
ClinGen Ensembl |
|
|
COSM3697941 CA364809933 rs1196668822 |
216 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA3884778 rs541631037 |
216 | R>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs746022699 CA3884776 |
218 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs746022699 CA3884775 |
218 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs779074725 CA3884774 |
219 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA3884773 rs757375740 |
219 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs757375740 CA364809914 |
219 | R>P | No |
ClinGen ExAC gnomAD |
|
|
COSM1176528 CA3884771 rs764672977 |
220 | P>L | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA364809906 rs1481905460 |
221 | L>V | No |
ClinGen gnomAD |
|
|
rs371527631 CA3884768 CA3884767 |
224 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA141268334 rs772064174 |
225 | G>D | No |
ClinGen gnomAD |
|
|
CA3884766 rs773823914 |
225 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA364809879 rs772064174 |
225 | G>V | No |
ClinGen gnomAD |
|
|
rs765905195 CA3884765 |
226 | K>* | No |
ClinGen ExAC gnomAD |
|
|
COSM597205 CA364809870 rs1328280287 |
227 | V>L | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA364809862 rs1168885226 |
228 | V>A | No |
ClinGen TOPMed |
|
|
rs748064015 CA141268333 |
228 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA3884763 rs367693161 |
229 | G>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1582360143 CA364809844 |
231 | Y>D | No |
ClinGen Ensembl |
|
|
rs769719606 CA3884762 |
232 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3884760 rs774249812 |
233 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3884759 rs774249812 |
233 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1318186542 CA364809822 |
234 | W>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs746136093 CA3884758 |
235 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs867150619 CA141268331 |
235 | R>I | No |
ClinGen Ensembl |
|
|
CA141268332 rs867150619 |
235 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
rs779250933 CA3884757 |
236 | A>E | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 237 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364809809 rs1160274987 |
237 | D>Y | No |
ClinGen gnomAD |
|
|
rs1412180321 CA364809792 |
239 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1445262803 CA364809769 COSM451750 |
243 | D>N | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA364809753 rs1245024150 |
244 | M>I | No |
ClinGen gnomAD |
|
|
CA364809748 rs987713823 |
245 | A>G | No |
ClinGen Ensembl |
|
|
CA364809752 rs1207106376 |
245 | A>T | No |
ClinGen gnomAD |
|
|
CA141268329 rs987713823 |
245 | A>V | No |
ClinGen Ensembl |
|
|
CA364813089 rs1367932495 |
246 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA364813072 rs1166827675 |
249 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1562211527 CA364813063 |
250 | S>N | No |
ClinGen Ensembl |
|
|
rs1562211513 CA364813056 |
251 | L>F | No |
ClinGen Ensembl |
|
|
CA364813052 rs771270674 |
252 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
CA364813051 rs771270674 |
252 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA3884717 rs771270674 |
252 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs749451987 CA3884716 |
252 | Q>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 253 | V>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs778010864 CA3884713 |
255 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1490822629 CA364813017 |
257 | N>S | No |
ClinGen gnomAD |
|
|
rs769712548 CA3884712 |
258 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1203839514 CA364813005 |
259 | K>T | No |
ClinGen gnomAD |
|
|
CA141264698 rs510737 |
261 | V>G | No |
ClinGen Ensembl |
|
|
CA141264697 rs558229994 |
263 | K>Q | No |
ClinGen TOPMed |
|
|
CA364812972 COSM1660717 rs1252525392 |
264 | R>C | kidney [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA3884710 rs781519334 |
264 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3884709 rs755419528 |
265 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs372171828 CA141264696 |
265 | R>H | No |
ClinGen ESP gnomAD |
|
|
rs1405889567 CA364812961 |
266 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1405889567 CA364812962 |
266 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1582334002 CA364812965 |
266 | G>R | No |
ClinGen Ensembl |
|
|
rs771983651 CA141264695 |
267 | S>Y | No |
ClinGen Ensembl |
|
|
rs1347962268 CA364812950 |
268 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs964222190 CA141264693 |
270 | G>E | No |
ClinGen Ensembl |
|
|
CA141264694 rs990286103 |
270 | G>R | No |
ClinGen Ensembl |
|
|
rs1562211376 CA364812881 |
278 | K>I | No |
ClinGen Ensembl |
|
|
CA3884707 rs780331613 |
278 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA3884705 rs758060613 |
280 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs1377218376 CA364812855 |
282 | T>A | No |
ClinGen gnomAD |
|
|
rs1270501119 CA364812853 |
282 | T>I | No |
ClinGen TOPMed |
|
|
CA3884700 rs750030557 |
284 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA3884697 rs780765140 |
288 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1252123629 CA364812807 |
289 | K>R | No |
ClinGen gnomAD |
|
|
rs763929507 CA3884695 |
290 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA364812799 rs1482741561 |
290 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 294 | T>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1263324011 CA364812764 |
295 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 297 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201452528 CA3884680 |
298 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1489368084 CA364812726 |
299 | W>* | No |
ClinGen gnomAD |
|
|
CA3884678 rs374604318 COSM3784720 |
302 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs149616588 CA141264686 |
302 | R>W | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs976328147 CA141264685 |
303 | T>A | No |
ClinGen TOPMed |
|
|
CA3884677 rs763590206 |
303 | T>K | No |
ClinGen ExAC |
|
|
CA364812701 rs1401021387 |
304 | E>K | No |
ClinGen gnomAD |
|
|
CA364812691 rs1582333284 |
305 | K>* | No |
ClinGen Ensembl |
|
|
rs911385329 CA141264684 |
305 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs752630184 CA3884673 |
306 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA364812677 rs1184839109 |
307 | N>S | No |
ClinGen gnomAD |
|
| TCGA novel | 308 | L>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA364812656 rs759372604 |
310 | N>K | No |
ClinGen ExAC gnomAD |
|
|
rs773616693 CA3884669 |
311 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1286750096 CA364812641 |
313 | K>Q | No |
ClinGen gnomAD |
|
|
CA364812624 rs560152490 |
315 | H>D | No |
ClinGen ExAC gnomAD |
|
|
rs768093409 CA141264683 |
315 | H>R | No |
ClinGen Ensembl |
|
|
rs560152490 CA3884668 |
315 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA364812616 rs1359336954 |
316 | L>P | No |
ClinGen gnomAD |
|
|
rs150481412 CA3884667 |
319 | V>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs768734456 CA3884665 |
321 | I>M | No |
ClinGen ExAC |
|
|
rs776587768 CA3884666 |
321 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1269878575 CA364812580 |
322 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 323 | V>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3884664 rs369806559 |
323 | V>I | No |
ClinGen ESP ExAC gnomAD |
No associated diseases with Q9NPZ5
No regional properties for Q9NPZ5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9NPZ5 | |||
Functions
| Description | ||
|---|---|---|
| EC Number | 2.4.1.135 | Hexosyltransferases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein. |
| metal ion binding | Binding to a metal ion. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| carbohydrate biosynthetic process | The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. |
| carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. |
| chondroitin sulfate proteoglycan biosynthetic process | The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. |
| protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q5CAZ6 | B3GAT2 | Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 | Canis lupus familiaris (Dog) (Canis familiaris) | PR |
| Q653F4 | IRX14 | Probable beta-1,4-xylosyltransferase IRX14 | Oryza sativa subsp japonica (Rice) | PR |
| Q9ZQC6 | IRX9 | Beta-1,4-xylosyltransferase IRX9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKSALFTRFF | ILLPWILIVI | IMLDVDTRRP | VPPLTPRPYF | SPYAVGRGGA | RLPLRRGGPA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| HGTQKRNQSR | PQPQPEPQLP | TIYAITPTYS | RPVQKAELTR | LANTFRQVAQ | LHWILVEDAA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ARSELVSRFL | ARAGLPSTHL | HVPTPRRYKR | PGLPRATEQR | NAGLAWLRQR | HQHQRAQPGV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LFFADDDNTY | SLELFQEMRT | TRKVSVWPVG | LVGGRRYERP | LVENGKVVGW | YTGWRADRPF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AIDMAGFAVS | LQVILSNPKA | VFKRRGSQPG | MQESDFLKQI | TTVEELEPKA | NNCTKVLVWH |
| 310 | 320 | ||||
| TRTEKVNLAN | EPKYHLDTVK | IEV |