Q9LFD2
PR
Gene name |
LAC8 (At5g01040, F7J8.20) |
Protein name |
Laccase-8 |
Names |
Benzenediol:oxygen oxidoreductase 8, Diphenol oxidase 8, Urishiol oxidase 8 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G01040 |
EC number |
1.10.3.2: With oxygen as acceptor |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9LFD2
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9LFD2-F1 | Predicted | AlphaFoldDB |
54 variants for Q9LFD2
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH06900353 | 5 | H>L | No | 1000Genomes | |
| ENSVATH13863071 | 7 | Y>S | No | 1000Genomes | |
| ENSVATH06900352 | 10 | N>S | No | 1000Genomes | |
| ENSVATH03000202 | 15 | V>F | No | 1000Genomes | |
| tmp_5_16064_C_T | 27 | V>I | No | 1000Genomes | |
| ENSVATH06900351 | 28 | V>I | No | 1000Genomes | |
| tmp_5_16053_A_T | 30 | H>Q | No | 1000Genomes | |
| ENSVATH10465105 | 34 | I>V | No | 1000Genomes | |
| ENSVATH10465093 | 35 | Q>K | No | 1000Genomes | |
| ENSVATH13863068 | 43 | C>Y | No | 1000Genomes | |
| tmp_5_15688_T_C | 48 | I>V | No | 1000Genomes | |
| tmp_5_15637_C_T | 65 | G>S | No | 1000Genomes | |
| tmp_5_15605_G_C | 75 | N>K | No | 1000Genomes | |
| ENSVATH06900342 | 104 | C>F | No | 1000Genomes | |
| tmp_5_15361_C_T | 109 | G>D | No | 1000Genomes | |
| tmp_5_15337_T_C | 117 | D>G | No | 1000Genomes | |
| tmp_5_15259_A_G | 143 | V>A | No | 1000Genomes | |
| tmp_5_15214_T_C | 158 | Y>C | No | 1000Genomes | |
| tmp_5_15191_G_C | 166 | Q>E | No | 1000Genomes | |
| ENSVATH10465009 | 171 | T>I | No | 1000Genomes | |
| tmp_5_14849_T_G | 174 | R>S | No | 1000Genomes | |
| ENSVATH06900330 | 196 | S>T | No | 1000Genomes | |
| ENSVATH10464982 | 204 | M>L | No | 1000Genomes | |
| ENSVATH06900326 | 207 | L>V | No | 1000Genomes | |
| tmp_5_14617_A_G | 219 | I>T | No | 1000Genomes | |
| tmp_5_14582_T_C | 231 | K>E | No | 1000Genomes | |
| ENSVATH06900325 | 236 | N>K | No | 1000Genomes | |
| ENSVATH10464981 | 237 | V>I | No | 1000Genomes | |
| tmp_5_14560_G_T | 238 | T>K | No | 1000Genomes | |
| ENSVATH10464980 | 247 | S>T | No | 1000Genomes | |
| ENSVATH06900324 | 251 | L>F | No | 1000Genomes | |
| ENSVATH10464978 | 306 | A>V | No | 1000Genomes | |
| ENSVATH03000184 | 307 | T>M | No | 1000Genomes | |
| tmp_5_14333_C_T | 314 | E>K | No | 1000Genomes | |
| ENSVATH10464976 | 320 | P>L | No | 1000Genomes | |
| ENSVATH00806023 | 330 | T>S | No | 1000Genomes | |
| tmp_5_14276_T_C | 333 | I>V | No | 1000Genomes | |
| ENSVATH06900322 | 344 | P>R | No | 1000Genomes | |
| tmp_5_14213_A_G | 354 | F>L | No | 1000Genomes | |
| tmp_5_14210_T_G | 355 | I>L | No | 1000Genomes | |
| ENSVATH10464975 | 363 | P>R | No | 1000Genomes | |
| ENSVATH06900321 | 379 | A>V | No | 1000Genomes | |
| ENSVATH06900320 | 392 | R>G | No | 1000Genomes | |
| tmp_5_14035_T_A | 413 | N>I | No | 1000Genomes | |
| tmp_5_13971_C_T | 434 | M>I | No | 1000Genomes | |
| tmp_5_13882_G_T | 464 | P>Q | No | 1000Genomes | |
| ENSVATH06900314 | 511 | G>S | No | 1000Genomes | |
| ENSVATH06900311 | 525 | V>A | No | 1000Genomes | |
| ENSVATH10464941 | 537 | P>L | No | 1000Genomes | |
| tmp_5_13528_T_G | 541 | M>L | No | 1000Genomes | |
| ENSVATH00806022 | 545 | I>T | No | 1000Genomes | |
| tmp_5_13486_T_C | 555 | S>G | No | 1000Genomes | |
| tmp_5_13476_G_A | 558 | S>F | No | 1000Genomes | |
| ENSVATH03000178 | 567 | T>I | No | 1000Genomes |
No associated diseases with Q9LFD2
6 regional properties for Q9LFD2
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Multicopper oxidase, second cupredoxin domain | 160 - 306 | IPR001117 |
| domain | Multicopper oxidase, C-terminal | 411 - 548 | IPR011706 |
| domain | Multicopper oxidase, N-terminal | 34 - 148 | IPR011707 |
| domain | Laccase, second cupredoxin domain | 161 - 303 | IPR034285 |
| domain | Laccase, first cupredoxin domain | 30 - 146 | IPR034288 |
| domain | Laccase, third cupredoxin domain | 406 - 549 | IPR034289 |
Functions
| Description | ||
|---|---|---|
| EC Number | 1.10.3.2 | With oxygen as acceptor |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| apoplast | The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| copper ion binding | Binding to a copper (Cu) ion. |
| hydroquinone:oxygen oxidoreductase activity | Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O. |
| oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| lignin catabolic process | The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units. |
| response to copper ion | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus. |
| vegetative to reproductive phase transition of meristem | The process involved in transforming a meristem that produces vegetative structures, such as leaves, into a meristem that produces reproductive structures, such as a flower or an inflorescence. |
7 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q2R0L0 | LAC20 | Laccase-20 | Oryza sativa subsp japonica (Rice) | PR |
| Q2R0L2 | LAC19 | Laccase-19 | Oryza sativa subsp japonica (Rice) | PR |
| Q5N7A3 | LAC6 | Laccase-6 | Oryza sativa subsp japonica (Rice) | PR |
| Q6ID18 | LAC10 | Laccase-10 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q8VZA1 | LAC11 | Laccase-11 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9FY79 | LAC14 | Laccase-14 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LFD1 | LAC9 | Laccase-9 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPRLHHYLSN | QAFLVLLLFS | SIASAAVVEH | VLHIQDVVVK | PLCKEQIIPA | ANGSLPGPTI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NVREGDTLVV | NVINNSTYNV | TIHWHGVFQL | KSVWMDGANM | ITQCPIQPGY | NFTYQFDITG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QEGTLLWHAH | VVNLRATLHG | ALVIRPRSGR | PYPFPKPYKE | VPIVFQQWWD | TDVRLLQLRP |
| 190 | 200 | 210 | 220 | 230 | 240 |
| APVSDAYLIN | GLAGDSYPCS | ENRMFNLKVV | QGKTYLLRIV | NAALNTHLFF | KIANHNVTVV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| AVDAVYSTPY | LTDVMILTPG | QTVDALLTAD | QAIGKYYMAT | LPYISAIGIP | TPDIKPTRGL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| IVYQGATSSS | SPAEPLMPVP | NDMSTAHRFT | SNITSLVGGP | HWTPVPRHVD | EKMFITMGLG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| LDPCPAGTKC | IGPLGQRYAG | SLNNRTFMIP | ERISMQEAYF | YNISGIYTDD | FPNQPPLKFD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| YTKFEQRTNN | DMKMMFPERK | TSVKKIRFNS | TVEIVLQNTA | IISPESHPMH | LHGFNFYVLG |
| 490 | 500 | 510 | 520 | 530 | 540 |
| YGFGNYDPIR | DARKLNLFNP | QMHNTVGVPP | GGWVVLRFIA | NNPGVWLFHC | HMDAHLPYGI |
| 550 | 560 | 570 | 580 | ||
| MSAFIVQNGP | TPETSLPSPP | SNLPQCTRDP | TIYDSRTTNI | DLSY |