Q9HCJ5
Gene name |
ZSWIM6 |
Protein name |
Zinc finger SWIM domain-containing protein 6 |
Names |
|
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:57688 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9HCJ5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9HCJ5-F1 | Predicted | AlphaFoldDB |
667 variants for Q9HCJ5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs779283808 RCV002560247 RCV001573858 RCV001198461 |
56 | A>missing | Acromelic frontonasal dysostosis Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
rs754658198 RCV000999645 CA3278300 |
136 | G>V | Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs772099709 RCV000662182 |
147 | A>missing | Acromelic frontonasal dysostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002517354 rs864309616 RCV001573694 RCV000202959 |
153 | G>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002524967 rs864309616 RCV000513593 |
154 | G>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001336002 rs1747601529 |
228 | H>R | Acromelic frontonasal dysostosis [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001262755 RCV002069379 rs1046738327 CA119662041 |
446 | A>V | Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000964469 RCV000709778 CA3278396 rs140760439 |
636 | V>M | Acromelic frontonasal dysostosis [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs371478900 CA119663027 RCV001871880 RCV001336001 |
664 | M>T | Acromelic frontonasal dysostosis [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
CA3278438 RCV001331160 rs756935198 |
761 | R>W | Acromelic frontonasal dysostosis [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs748121822 CA119663859 RCV001256034 RCV001839036 RCV001879950 RCV002246247 |
853 | E>K | Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features Intellectual disability [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1554041295 RCV000760560 CA359946038 RCV000590997 RCV000578491 |
913 | R>* | Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features ZSWIM6 related intellectual disability [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
| VAR_080756 | 913 | R>del | NEDMAGA [UniProt] | Yes | UniProt |
|
RCV000790964 rs745988643 RCV002067390 CA3278486 |
961 | S>G | Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001253693 CA119664266 rs896504353 RCV000958942 |
1077 | A>V | Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA170707 RCV000624254 RCV000478201 RCV000143865 rs587777695 VAR_071802 |
1163 | R>W | Acromelic frontonasal dysostosis Inborn genetic diseases AFND [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt Ensembl dbSNP |
|
rs1291036973 CA359939787 |
3 | E>* | No |
ClinGen gnomAD |
|
| TCGA novel | 6 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1165096297 CA359939810 |
6 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1377400202 CA359939814 |
7 | Q>* | No |
ClinGen gnomAD |
|
|
rs1483067522 CA359939824 |
8 | P>T | No |
ClinGen TOPMed |
|
|
rs1219369551 CA359939832 |
9 | P>L | No |
ClinGen TOPMed |
|
|
CA359939828 rs1579933287 |
9 | P>T | No |
ClinGen Ensembl |
|
|
rs943024318 CA119631603 |
10 | P>H | No |
ClinGen TOPMed gnomAD |
|
|
rs943024318 CA359939838 |
10 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1038709799 CA119631606 |
11 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA359939859 rs1345013612 |
14 | L>F | No |
ClinGen TOPMed |
|
|
CA359939874 rs1361775935 |
16 | C>F | No |
ClinGen gnomAD |
|
|
CA359939879 rs1291852808 |
17 | R>G | No |
ClinGen TOPMed |
|
|
CA359939880 rs1291852808 |
17 | R>W | No |
ClinGen TOPMed |
|
|
CA359939894 rs1285335711 |
19 | G>A | No |
ClinGen gnomAD |
|
|
RCV001539765 rs565100893 RCV000203191 |
25 | G>missing | No |
ClinVar dbSNP |
|
|
rs1292739344 CA359939935 |
26 | G>S | No |
ClinGen TOPMed |
|
|
rs1425234738 CA359939940 |
27 | S>G | No |
ClinGen TOPMed |
|
|
CA359939948 rs1456197449 |
28 | S>G | No |
ClinGen TOPMed |
|
|
CA359939950 rs1312897937 |
28 | S>N | No |
ClinGen TOPMed |
|
|
CA359939956 rs963100061 |
29 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs963100061 CA119631627 |
29 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs980767066 CA119631629 |
31 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA359939971 rs1248375396 |
32 | G>S | No |
ClinGen gnomAD |
|
|
RCV000500002 rs528020839 RCV001707712 |
33 | G>missing | No |
ClinVar dbSNP |
|
|
rs1313218666 CA359939977 |
33 | G>S | No |
ClinGen gnomAD |
|
|
rs1033632244 CA359939990 |
35 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1033632244 CA119631631 |
35 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359940003 rs1300771908 |
37 | G>D | No |
ClinGen TOPMed |
|
|
rs1378024753 CA359940000 |
37 | G>S | No |
ClinGen TOPMed |
|
|
rs1300771908 CA359940005 |
37 | G>V | No |
ClinGen TOPMed |
|
|
CA359940010 rs1359304738 |
38 | Y>C | No |
ClinGen TOPMed |
|
|
CA359940022 rs1228304711 |
40 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1228304711 CA359940023 |
40 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1251801615 CA359940028 |
41 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA359940033 rs1189008336 |
41 | A>V | No |
ClinGen TOPMed |
|
|
CA359940042 rs1422977600 |
43 | R>G | No |
ClinGen TOPMed |
|
|
rs960650085 CA119631635 |
43 | R>Q | No |
ClinGen TOPMed |
|
|
CA359940047 rs1253791362 |
44 | P>A | No |
ClinGen TOPMed |
|
|
rs991997128 CA119631637 |
44 | P>L | No |
ClinGen TOPMed |
|
|
rs913731645 CA359940061 |
46 | P>L | No |
ClinGen TOPMed |
|
|
CA359940060 rs913731645 |
46 | P>Q | No |
ClinGen TOPMed |
|
|
CA119631638 rs913731645 |
46 | P>R | No |
ClinGen TOPMed |
|
|
rs1483697647 CA359940058 |
46 | P>S | No |
ClinGen TOPMed |
|
|
rs1344978295 CA359940062 |
47 | R>G | No |
ClinGen TOPMed |
|
|
CA359940072 rs1481614683 |
48 | A>E | No |
ClinGen gnomAD |
|
|
CA359940067 rs1244678082 |
48 | A>T | No |
ClinGen TOPMed |
|
|
rs1579933532 CA359940073 |
49 | G>S | No |
ClinGen Ensembl |
|
|
rs1194009730 CA359940089 |
51 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA119631643 rs945198780 |
52 | A>V | No |
ClinGen TOPMed |
|
|
rs1457315319 CA359940114 |
56 | A>S | No |
ClinGen TOPMed |
|
|
CA359940136 rs1185007277 |
59 | G>C | No |
ClinGen gnomAD |
|
|
rs1424620932 CA359940140 |
60 | G>S | No |
ClinGen TOPMed |
|
|
rs943106805 CA119631650 |
61 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA359940155 rs1161891703 |
62 | A>G | No |
ClinGen gnomAD |
|
|
rs1252593637 CA359940158 |
63 | L>V | No |
ClinGen TOPMed |
|
|
rs764433036 CA3278278 |
64 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA359940184 rs1209838989 |
67 | P>Q | No |
ClinGen TOPMed |
|
|
CA359940190 rs1487785472 |
68 | P>L | No |
ClinGen TOPMed |
|
|
rs1487785472 CA359940188 |
68 | P>Q | No |
ClinGen TOPMed |
|
|
CA359940194 rs1335106142 |
69 | G>D | No |
ClinGen TOPMed |
|
|
CA359940214 rs1308684590 |
72 | Q>R | No |
ClinGen gnomAD |
|
|
rs1579933628 CA359940227 |
74 | P>T | No |
ClinGen Ensembl |
|
|
CA359940261 rs1388407116 |
79 | D>G | No |
ClinGen TOPMed |
|
|
CA359940266 rs1295102505 |
80 | I>V | No |
ClinGen TOPMed |
|
|
rs1310313047 CA359940277 |
81 | A>V | No |
ClinGen gnomAD |
|
|
CA359940284 rs1454947270 |
83 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
CA359940295 rs1157273146 |
84 | R>S | No |
ClinGen TOPMed |
|
|
rs1263486477 CA359940302 |
85 | V>A | No |
ClinGen gnomAD |
|
| TCGA novel | 87 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1279014457 CA359940309 |
87 | E>K | No |
ClinGen Ensembl |
|
|
CA359940324 rs1176369047 |
88 | K>N | No |
ClinGen gnomAD |
|
|
CA359940338 rs1412871150 |
90 | P>R | No |
ClinGen TOPMed |
|
|
rs778475893 CA3278284 |
93 | R>C | No |
ClinGen ExAC gnomAD |
|
|
CA359940385 rs1414352823 |
97 | R>C | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 97 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs934240229 CA119631663 |
97 | R>L | No |
ClinGen TOPMed |
|
|
CA359940383 rs1414352823 |
97 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1408730986 CA359940393 |
98 | F>S | No |
ClinGen gnomAD |
|
|
rs1464317441 CA359940400 |
99 | E>G | No |
ClinGen gnomAD |
|
|
rs1266592596 CA359940397 |
99 | E>Q | No |
ClinGen TOPMed |
|
|
rs1330929152 CA359940406 |
100 | R>C | No |
ClinGen gnomAD |
|
|
CA359940405 rs1330929152 |
100 | R>G | No |
ClinGen gnomAD |
|
|
rs1355267695 CA359940409 |
100 | R>H | No |
ClinGen gnomAD |
|
|
rs1444482196 CA359940421 |
102 | P>Q | No |
ClinGen gnomAD |
|
|
CA3278288 rs746825579 |
103 | E>G | No |
ClinGen ExAC |
|
|
rs1365446571 CA359940430 |
104 | P>T | No |
ClinGen gnomAD |
|
|
CA359940440 rs1283738148 |
105 | V>A | No |
ClinGen gnomAD |
|
|
CA359940444 rs1196443245 |
106 | Q>* | No |
ClinGen gnomAD |
|
|
CA359940447 rs1257032805 |
106 | Q>R | No |
ClinGen gnomAD |
|
|
CA3278292 rs769821581 |
108 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs1478010760 CA359940458 |
108 | R>H | No |
ClinGen gnomAD |
|
|
rs1478010760 CA359940460 |
108 | R>L | No |
ClinGen gnomAD |
|
|
CA359940461 rs1200766544 |
109 | I>V | No |
ClinGen gnomAD |
|
|
CA359940468 rs1477050035 |
110 | V>I | No |
ClinGen gnomAD |
|
|
rs1397513577 CA359940478 |
111 | Y>F | No |
ClinGen gnomAD |
|
|
CA359940485 rs1411829853 |
112 | W>L | No |
ClinGen gnomAD |
|
|
CA359940492 rs1321718582 |
113 | S>P | No |
ClinGen gnomAD |
|
|
rs1387721357 CA359940516 |
116 | R>P | No |
ClinGen TOPMed |
|
|
rs1339694314 CA359940541 |
120 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359940542 rs1339694314 |
120 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
CA359940565 rs1379419636 |
123 | M>T | No |
ClinGen TOPMed |
|
|
CA359940607 rs1450533686 |
129 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359940609 rs1246635200 |
129 | T>N | No |
ClinGen TOPMed |
|
|
rs1205380238 CA359940612 |
130 | G>S | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 132 | G>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3278298 rs767935150 |
132 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1561194047 CA359940632 |
133 | A>D | No |
ClinGen Ensembl |
|
|
rs1487568033 CA359940629 |
133 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1561194047 CA359940634 |
133 | A>V | No |
ClinGen Ensembl |
|
|
CA359940638 rs1373969893 |
134 | A>E | No |
ClinGen gnomAD |
|
|
rs1161662183 CA359940649 |
136 | G>C | No |
ClinGen gnomAD |
|
|
rs1425385185 CA359940654 |
137 | P>S | No |
ClinGen gnomAD |
|
|
CA3278303 rs757801604 |
139 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA359940675 rs1436953208 |
140 | D>G | No |
ClinGen TOPMed |
|
|
CA359940672 rs1317426621 |
140 | D>H | No |
ClinGen gnomAD |
|
|
CA359940673 rs1317426621 |
140 | D>Y | No |
ClinGen gnomAD |
|
|
rs1327267898 CA359940680 |
141 | S>C | No |
ClinGen TOPMed |
|
|
rs1327267898 CA359940679 |
141 | S>G | No |
ClinGen TOPMed |
|
|
CA359940684 rs1326781747 |
141 | S>I | No |
ClinGen gnomAD |
|
|
rs1432545668 CA359940685 |
141 | S>R | No |
ClinGen gnomAD |
|
|
rs1272322891 CA359940702 |
144 | G>A | No |
ClinGen TOPMed |
|
|
CA3278306 rs777715721 |
144 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1339874240 CA359940709 |
145 | G>D | No |
ClinGen TOPMed |
|
|
rs1446165351 CA359940714 |
146 | G>A | No |
ClinGen TOPMed |
|
|
CA359940758 rs1430663925 |
154 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359940769 rs1288894654 |
155 | S>F | No |
ClinGen TOPMed |
|
|
CA359940798 rs1579933968 |
160 | A>G | No |
ClinGen Ensembl |
|
|
CA359940819 rs1579933996 |
164 | A>P | No |
ClinGen Ensembl |
|
|
rs1579934054 CA359940830 |
166 | A>T | No |
ClinGen Ensembl |
|
|
CA359940834 rs1224371923 |
166 | A>V | No |
ClinGen TOPMed |
|
|
rs1346140595 CA359940837 |
167 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1439180609 CA359940844 |
168 | S>A | No |
ClinGen TOPMed |
|
|
rs1262666805 CA359940873 |
173 | A>P | No |
ClinGen TOPMed |
|
|
CA359940883 rs1216003604 |
174 | A>G | No |
ClinGen gnomAD |
|
|
CA359940878 rs1311408703 |
174 | A>T | No |
ClinGen gnomAD |
|
|
rs1358132237 CA359940889 |
175 | A>V | No |
ClinGen TOPMed |
|
|
CA359940898 rs1167757057 |
177 | A>T | No |
ClinGen TOPMed |
|
|
CA359940904 rs1215325430 |
178 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1213029953 CA359940926 |
182 | A>S | No |
ClinGen TOPMed |
|
| TCGA novel | 183 | A>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1579934182 CA359940934 |
183 | A>S | No |
ClinGen Ensembl |
|
|
CA359940937 rs1579934185 |
183 | A>V | No |
ClinGen Ensembl |
|
|
CA359940950 rs1296722699 |
186 | A>S | No |
ClinGen TOPMed |
|
|
rs776194131 CA119631701 |
186 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA359940965 rs1377907738 |
188 | A>G | No |
ClinGen TOPMed |
|
|
rs1300603630 CA359940970 |
189 | P>Q | No |
ClinGen TOPMed |
|
|
rs1579934206 CA359940991 |
193 | A>T | No |
ClinGen Ensembl |
|
|
rs1445409270 CA359941002 |
194 | A>V | No |
ClinGen gnomAD |
|
|
rs1378516846 CA359941003 CA359941004 |
195 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1579934226 CA359941012 |
196 | A>G | No |
ClinGen Ensembl |
|
|
rs976065857 CA119631708 |
196 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA119631706 rs976065857 |
196 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1303910746 CA359941028 |
199 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1367538509 CA359941034 |
200 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1157915201 CA359941046 |
201 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA359941051 rs1402248371 |
202 | E>G | No |
ClinGen gnomAD |
|
|
CA359941047 rs1385497734 |
202 | E>K | No |
ClinGen gnomAD |
|
|
rs1203707535 CA359941059 |
203 | T>R | No |
ClinGen TOPMed |
|
|
CA359941062 rs1481874382 |
204 | R>W | No |
ClinGen TOPMed |
|
|
CA359941072 rs1252260012 |
206 | P>A | No |
ClinGen TOPMed |
|
|
CA359941087 rs1221249652 |
208 | R>C | No |
ClinGen TOPMed |
|
|
rs1273033680 CA359941100 |
210 | G>A | No |
ClinGen gnomAD |
|
|
CA359941108 rs1320769417 |
211 | I>M | No |
ClinGen TOPMed |
|
|
CA359941131 rs1374002522 |
215 | E>V | No |
ClinGen gnomAD |
|
|
CA359941136 rs1234718171 |
216 | S>G | No |
ClinGen TOPMed |
|
|
rs1239039943 CA359941142 |
216 | S>R | No |
ClinGen TOPMed gnomAD |
|
|
CA359941146 rs1261825773 |
217 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
CA359941154 rs1398459382 |
218 | C>F | No |
ClinGen TOPMed |
|
|
rs1013468013 CA359941157 |
219 | V>I | No |
ClinGen TOPMed |
|
|
rs1013468013 CA119631712 |
219 | V>L | No |
ClinGen TOPMed |
|
|
rs1262865395 CA359941174 |
221 | N>S | No |
ClinGen gnomAD |
|
|
CA359941178 rs1185631442 |
222 | V>I | No |
ClinGen gnomAD |
|
| TCGA novel | 226 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359941262 rs1421046512 |
232 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1461135651 CA359941300 |
238 | I>V | No |
ClinGen gnomAD |
|
|
CA3278319 rs768063940 |
240 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1268038231 CA359941319 |
241 | E>K | No |
ClinGen TOPMed |
|
|
CA359941328 rs1385650020 |
242 | P>A | No |
ClinGen gnomAD |
|
|
CA119657085 rs951091051 |
244 | T>I | No |
ClinGen TOPMed |
|
|
CA359941451 rs1313624729 |
259 | S>L | No |
ClinGen TOPMed |
|
|
CA359941452 rs1228404037 |
260 | V>M | No |
ClinGen gnomAD |
|
|
rs1417645666 CA359941473 |
263 | S>G | No |
ClinGen TOPMed |
|
|
COSM1234846 rs1487546158 CA359941549 |
273 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1580013859 CA359941602 |
281 | Y>S | No |
ClinGen Ensembl |
|
|
CA359941610 rs1476285501 |
282 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1490478004 CA359941619 |
283 | I>M | No |
ClinGen gnomAD |
|
|
rs1387118155 CA359941629 |
285 | K>T | No |
ClinGen gnomAD |
|
|
rs1259358046 CA359941679 |
292 | H>R | No |
ClinGen gnomAD |
|
|
rs1162324565 CA359941813 |
311 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs764968657 CA3278322 |
319 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359941871 rs1383059068 |
319 | H>Y | No |
ClinGen gnomAD |
|
|
CA359941881 rs1320078704 |
320 | T>R | No |
ClinGen gnomAD |
|
|
CA359941932 rs1292536723 |
328 | K>I | No |
ClinGen gnomAD |
|
|
rs1374402091 CA359941958 |
332 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 334 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 338 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1046915074 CA119657093 |
341 | N>S | No |
ClinGen gnomAD |
|
|
rs1459741854 CA359942119 |
354 | S>G | No |
ClinGen gnomAD |
|
|
rs1202628407 CA359942129 |
355 | I>V | No |
ClinGen gnomAD |
|
|
CA359942134 rs1243294136 |
356 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 358 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs751553216 CA3278327 |
359 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1407916833 CA359942220 |
366 | E>D | No |
ClinGen gnomAD |
|
| TCGA novel | 366 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1161781784 CA359942274 |
374 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1245245248 CA359942295 |
377 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA359942309 rs1274993723 |
379 | G>D | No |
ClinGen TOPMed |
|
|
CA359942315 rs1408484978 |
380 | G>E | No |
ClinGen gnomAD |
|
|
CA359942312 rs1337629732 |
380 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1290855573 CA359942335 COSM1438071 |
383 | G>R | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1278992925 CA359942356 COSM3768835 |
386 | K>R | liver [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1372575470 CA359942362 |
387 | Q>K | No |
ClinGen gnomAD |
|
|
CA359942376 rs1298020865 |
389 | N>H | No |
ClinGen TOPMed |
|
|
CA359942405 rs1224252342 |
393 | A>T | No |
ClinGen gnomAD |
|
|
rs373448587 CA3278340 |
396 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761136464 CA3278339 |
396 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs1021596845 CA119659324 |
407 | A>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 408 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs762578604 CA3278342 |
411 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3278343 rs763658177 |
413 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA359942607 rs1580037389 |
420 | D>A | No |
ClinGen Ensembl |
|
|
rs761786081 CA3278345 |
421 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA3278344 rs751036403 |
421 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs1474582216 CA359942617 |
422 | R>C | Variant assessed as Somatic; 6.547e-05 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA119659327 rs878885866 |
422 | R>H | No |
ClinGen TOPMed |
|
|
CA359942621 rs1167550225 |
423 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA359942639 rs767463992 |
426 | W>G | No |
ClinGen ExAC gnomAD |
|
|
rs767463992 CA3278346 |
426 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA119659329 rs988985707 |
427 | R>Q | No |
ClinGen gnomAD |
|
|
rs576961780 CA119659328 COSM306080 |
427 | R>W | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated 1000Genomes |
|
CA359942649 rs866469065 |
428 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs866469065 CA119659330 |
428 | Q>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1580037528 CA359942660 |
429 | Q>R | No |
ClinGen Ensembl |
|
|
rs1332596435 CA359942671 |
431 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359942670 rs1332596435 |
431 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1428295979 CA359942681 |
432 | A>V | No |
ClinGen gnomAD |
|
|
rs904124463 CA119659333 |
433 | M>V | No |
ClinGen TOPMed |
|
|
rs1362151427 CA359942733 |
439 | Q>H | No |
ClinGen gnomAD |
|
|
rs1242934936 CA359943084 |
448 | W>C | No |
ClinGen gnomAD |
|
|
rs1476488562 CA359943103 |
451 | I>V | No |
ClinGen gnomAD |
|
|
CA359943129 rs967924900 |
454 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
CA359943135 rs1306140927 |
455 | P>L | No |
ClinGen TOPMed |
|
|
CA359943136 rs1181871833 |
456 | H>N | No |
ClinGen gnomAD |
|
|
CA359943138 rs1181871833 |
456 | H>Y | No |
ClinGen gnomAD |
|
|
rs1431349605 CA359943190 |
462 | K>N | No |
ClinGen TOPMed |
|
|
rs1424005539 CA359943191 |
463 | A>T | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 467 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs538889252 CA3278351 |
467 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
| TCGA novel | 472 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1392712028 CA359942830 |
473 | N>S | No |
ClinGen gnomAD |
|
|
CA359942841 rs1369897766 |
474 | S>R | No |
ClinGen TOPMed |
|
|
rs1436800725 CA359942882 |
480 | W>* | No |
ClinGen gnomAD |
|
|
rs1326690623 CA359942877 |
480 | W>R | No |
ClinGen gnomAD |
|
|
CA359942895 rs1312352089 |
482 | D>H | No |
ClinGen gnomAD |
|
|
CA119662044 rs370738954 |
485 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs779185700 CA3278352 |
488 | E>Q | No |
ClinGen ExAC |
|
|
CA359942953 rs1245985227 |
490 | P>L | No |
ClinGen gnomAD |
|
|
rs941118270 CA119662045 |
491 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA3278353 rs201912422 |
491 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs964621464 CA119662046 |
494 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359942983 rs1466462272 |
495 | A>P | No |
ClinGen gnomAD |
|
|
rs190882707 COSM1069227 CA119662047 |
495 | A>V | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes gnomAD |
|
CA359942992 rs1242683919 |
497 | P>S | No |
ClinGen gnomAD |
|
|
CA119662048 rs1003655888 |
498 | Q>H | No |
ClinGen gnomAD |
|
|
rs1185433684 CA359943008 |
499 | G>D | No |
ClinGen gnomAD |
|
|
CA359943013 rs1220788564 |
500 | A>S | No |
ClinGen TOPMed |
|
|
rs1432334308 CA359943017 |
501 | N>H | No |
ClinGen gnomAD |
|
|
CA359943021 rs1370146086 |
501 | N>S | No |
ClinGen gnomAD |
|
|
rs1468501760 CA359943046 |
504 | Q>H | No |
ClinGen gnomAD |
|
|
CA119662489 rs1049726029 |
506 | S>A | No |
ClinGen TOPMed |
|
|
CA119662490 rs891217658 |
507 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA119662491 rs866333941 |
510 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1272205055 CA359943270 |
512 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1248470209 CA359943281 |
514 | V>L | No |
ClinGen gnomAD |
|
|
rs1580062599 CA359943294 |
516 | T>P | No |
ClinGen Ensembl |
|
|
rs1278674354 CA359943309 |
518 | A>G | No |
ClinGen TOPMed |
|
|
rs1200081412 CA359943328 |
521 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1200081412 COSM1438072 CA359943326 |
521 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1304027051 CA359943333 |
522 | C>R | No |
ClinGen TOPMed |
|
|
CA359943339 rs1173923166 |
522 | C>W | No |
ClinGen gnomAD |
|
|
CA359943340 rs1428199352 |
523 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA359943342 rs1428199352 |
523 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs766880699 CA3278364 |
528 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1171607746 CA359943393 |
529 | S>R | No |
ClinGen gnomAD |
|
|
rs1393682843 CA359943391 |
529 | S>T | No |
ClinGen gnomAD |
|
|
CA359943417 rs1580062677 |
533 | H>N | No |
ClinGen Ensembl |
|
|
CA359943438 rs1330156109 |
535 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
CA359943448 rs1352809441 |
537 | S>G | No |
ClinGen gnomAD |
|
|
rs1352809441 CA359943447 |
537 | S>R | No |
ClinGen gnomAD |
|
|
CA119662493 rs970962423 |
543 | Y>C | No |
ClinGen TOPMed |
|
|
rs1229099763 CA359943502 |
544 | C>F | No |
ClinGen Ensembl |
|
|
rs190856393 CA3278366 |
546 | H>D | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs766238385 CA3278367 |
546 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs190856393 CA359943514 |
546 | H>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs993411395 CA119662494 |
548 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA359943551 rs1580062743 |
551 | N>T | No |
ClinGen Ensembl |
|
|
CA359943566 rs1580062748 |
553 | L>P | No |
ClinGen Ensembl |
|
|
CA3278370 rs377616431 |
555 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1483970398 CA359943584 |
556 | S>P | No |
ClinGen gnomAD |
|
|
CA119662496 rs181002879 |
557 | R>C | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
RCV000931251 CA3278371 rs139745227 |
557 | R>H | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs139745227 CA359943591 |
557 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3278373 rs554100724 CA119662497 |
558 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA119662498 rs947147763 |
559 | W>R | No |
ClinGen TOPMed |
|
|
CA359943609 rs1449628998 |
560 | P>R | No |
ClinGen TOPMed |
|
|
CA119662524 rs1021250147 |
565 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1012794487 CA119662525 |
566 | V>I | No |
ClinGen Ensembl |
|
|
rs968415621 CA359943666 |
567 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA119662526 rs968415621 |
567 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1384571286 CA359943680 |
569 | A>V | No |
ClinGen gnomAD |
|
|
rs1389275964 CA359943718 |
575 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
COSM1319184 RCV000736090 RCV000974385 CA3278380 rs116036211 |
577 | R>C | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA359943733 rs1314315470 |
577 | R>H | No |
ClinGen gnomAD |
|
|
rs1260831217 CA359943761 |
581 | Y>C | No |
ClinGen TOPMed |
|
| TCGA novel | 582 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1195386628 CA359943776 |
583 | R>S | No |
ClinGen TOPMed |
|
|
CA359943812 rs1322206760 |
589 | A>G | No |
ClinGen gnomAD |
|
|
rs976654292 CA119662529 |
590 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs955750160 CA119662531 |
592 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1257102056 CA359943842 |
594 | N>S | No |
ClinGen TOPMed |
|
|
rs990330044 CA119662532 |
595 | T>S | No |
ClinGen Ensembl |
|
|
CA119662533 rs1021768229 |
597 | R>K | No |
ClinGen Ensembl |
|
|
CA119662534 rs954444840 |
598 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA359943866 rs954444840 |
598 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1442253430 CA359943890 |
601 | Q>H | No |
ClinGen gnomAD |
|
|
CA359943903 rs1308844857 |
603 | Q>E | No |
ClinGen gnomAD |
|
|
CA359943937 rs1415195748 |
607 | F>S | No |
ClinGen gnomAD |
|
|
rs1426037781 CA359943943 |
608 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs1157434799 CA359943949 |
609 | T>N | No |
ClinGen gnomAD |
|
|
rs772566819 CA3278384 |
610 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359943961 rs1458023369 |
611 | K>E | No |
ClinGen gnomAD |
|
|
CA359943966 rs1322815885 |
611 | K>N | No |
ClinGen gnomAD |
|
| rs761606372 | 613 | E>R | Variant assessed as Somatic; 6.122e-05 impact. [NCI-TCGA] | No | NCI-TCGA |
| rs761606372 | 613 | E>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA119662891 rs957821454 |
614 | L>Q | No |
ClinGen TOPMed |
|
|
rs896246605 CA119662890 |
614 | L>V | No |
ClinGen gnomAD |
|
|
rs1453289442 CA359944002 |
615 | P>H | No |
ClinGen TOPMed |
|
|
CA359944000 rs1427503293 |
615 | P>S | No |
ClinGen gnomAD |
|
|
CA359944010 rs1469456887 |
616 | H>R | No |
ClinGen gnomAD |
|
|
CA359944025 rs1176359801 |
618 | N>S | No |
ClinGen gnomAD |
|
|
rs1176945911 CA359944034 |
619 | I>R | No |
ClinGen gnomAD |
|
|
rs201369904 CA119662892 |
620 | T>N | No |
ClinGen gnomAD |
|
|
CA119662893 rs534372787 |
621 | S>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes NCI-TCGA TOPMed gnomAD |
|
CA359944045 rs534372787 |
621 | S>W | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA3278391 rs758542321 |
622 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs921808376 CA119662894 |
623 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359944060 rs375378529 |
624 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA3278392 rs375378529 |
624 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA359944064 rs1272601414 |
625 | L>M | No |
ClinGen TOPMed |
|
|
rs183803114 CA119662895 |
628 | W>* | No |
ClinGen 1000Genomes |
|
|
CA359944118 rs188344729 |
633 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1313442020 CA359944125 |
634 | D>A | No |
ClinGen gnomAD |
|
|
rs1313442020 CA359944126 |
634 | D>G | No |
ClinGen gnomAD |
|
|
rs954825742 CA119662897 |
645 | E>G | No |
ClinGen TOPMed |
|
|
rs1580066886 CA359944221 |
648 | R>C | No |
ClinGen Ensembl |
|
|
CA119662898 rs983495066 |
648 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA119662899 rs983495066 |
648 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA359944222 rs983495066 |
648 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA3278398 rs780393066 |
649 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1402862837 CA359944231 |
650 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
CA119662902 rs144610275 |
652 | E>D | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1191990062 CA359944256 |
653 | N>S | No |
ClinGen gnomAD |
|
|
rs747840775 CA3278399 |
654 | L>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 658 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1249715291 CA359944292 |
659 | D>H | No |
ClinGen TOPMed |
|
|
rs1369917656 CA359944295 |
659 | D>V | No |
ClinGen gnomAD |
|
|
CA3278402 rs746535535 |
661 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA3278409 RCV001091912 rs763282681 |
662 | E>D | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA359944346 rs1235180056 |
664 | M>I | No |
ClinGen TOPMed |
|
|
CA3278410 rs375719109 |
666 | Q>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs553418522 CA3278411 |
667 | C>R | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA359944364 rs1363572499 |
667 | C>Y | No |
ClinGen gnomAD |
|
|
rs1404576753 CA359944377 |
669 | S>A | No |
ClinGen gnomAD |
|
|
CA359944384 rs1323927365 |
670 | L>P | No |
ClinGen gnomAD |
|
|
rs767527109 CA3278413 |
674 | H>Q | No |
ClinGen ExAC gnomAD |
|
|
rs750996103 CA3278414 |
678 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756583079 CA3278415 |
679 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3278417 rs754512309 |
680 | F>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA3278416 rs780448236 |
680 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
CA3278418 rs755333533 |
684 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs912842794 CA119663030 |
689 | T>A | No |
ClinGen TOPMed |
|
|
rs191155035 CA3278419 |
689 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA3278421 rs770401179 |
696 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA359944560 rs1472409948 |
697 | I>T | No |
ClinGen gnomAD |
|
|
rs1561281589 CA359944585 |
701 | Q>H | No |
ClinGen Ensembl |
|
|
rs866037198 CA119663031 |
701 | Q>K | No |
ClinGen Ensembl |
|
|
COSM1438075 CA119663032 rs780828160 |
703 | R>C | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA119663033 rs995265434 |
703 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA119663034 rs1036063798 |
704 | I>V | No |
ClinGen TOPMed |
|
|
rs1170500590 CA359944632 |
708 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1388845181 CA359944653 |
712 | Q>E | No |
ClinGen gnomAD |
|
|
CA3278423 rs745838220 |
714 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA359944686 rs1340452553 |
716 | C>S | No |
ClinGen gnomAD |
|
|
CA3278425 rs199521047 |
717 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs894571955 CA119663036 |
717 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs555750978 CA119663037 |
718 | N>D | No |
ClinGen 1000Genomes |
|
|
CA359944733 rs1292259481 |
723 | I>N | No |
ClinGen TOPMed |
|
|
CA359944740 rs1228103988 |
724 | S>Y | No |
ClinGen gnomAD |
|
|
CA119663039 rs575815876 |
731 | L>S | No |
ClinGen 1000Genomes |
|
|
CA359944815 rs1255535979 |
734 | T>I | No |
ClinGen gnomAD |
|
|
CA119663040 rs1048857987 |
735 | L>M | No |
ClinGen TOPMed gnomAD |
|
|
CA119663041 rs77003350 |
737 | K>* | No |
ClinGen Ensembl |
|
|
rs1382893991 CA359944839 |
738 | I>M | No |
ClinGen gnomAD |
|
|
rs1188160859 CA359944850 |
740 | R>C | No |
ClinGen gnomAD |
|
|
CA3278426 rs148746224 |
740 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA359944852 rs148746224 |
740 | R>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1342359714 CA359944869 |
743 | A>T | No |
ClinGen gnomAD |
|
|
rs1158084205 CA359944874 |
743 | A>V | No |
ClinGen gnomAD |
|
|
rs768430171 CA3278427 |
745 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA119663043 rs1045620225 |
746 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
CA119663044 rs907160520 |
748 | E>Q | No |
ClinGen TOPMed |
|
|
rs374590409 CA119663427 |
752 | Y>H | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1376653861 CA359944944 |
753 | S>G | No |
ClinGen gnomAD |
|
|
rs1466122507 CA359944951 |
754 | G>S | No |
ClinGen gnomAD |
|
|
CA3278436 rs779327058 |
759 | I>V | No |
ClinGen ExAC |
|
|
CA119663428 rs981945594 |
760 | H>N | No |
ClinGen Ensembl |
|
|
rs1454367109 CA359944999 |
761 | R>Q | No |
ClinGen TOPMed gnomAD |
|
| VAR_076431 | 763 | S>R | No | UniProt | |
|
COSM1438076 rs1403420420 CA359945018 |
764 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs1331852212 CA359945025 |
765 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1331852212 CA359945026 |
765 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1331852212 CA359945024 |
765 | P>T | No |
ClinGen TOPMed gnomAD |
|
|
CA359945034 rs1235553393 |
766 | M>T | No |
ClinGen gnomAD |
|
|
rs1230764894 CA359945030 |
766 | M>V | No |
ClinGen Ensembl |
|
|
rs745391103 CA3278440 |
768 | T>K | No |
ClinGen ExAC gnomAD |
|
|
CA359945047 rs1358715935 |
768 | T>P | No |
ClinGen gnomAD |
|
|
CA359945056 rs1340037299 |
769 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs377739461 CA3278441 |
774 | F>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1561283194 CA359945100 |
775 | T>I | No |
ClinGen Ensembl |
|
|
rs557637276 CA3278443 |
776 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA359945108 rs1207789330 |
777 | L>F | No |
ClinGen gnomAD |
|
|
CA359945124 rs1266266379 |
780 | H>Y | No |
ClinGen gnomAD |
|
|
CA359945134 rs1561283225 |
781 | D>G | No |
ClinGen Ensembl |
|
|
rs370007762 CA119663431 |
781 | D>N | No |
ClinGen ESP gnomAD |
|
|
rs1561283241 CA359945157 |
784 | L>F | No |
ClinGen Ensembl |
|
|
rs1580070487 CA359945161 |
785 | A>S | No |
ClinGen Ensembl |
|
|
rs1398243612 CA359945169 |
786 | Y>C | No |
ClinGen TOPMed |
|
|
CA359945174 rs1387774052 |
787 | K>E | No |
ClinGen gnomAD |
|
|
CA359945179 rs1449465061 |
787 | K>N | No |
ClinGen gnomAD |
|
|
rs941362047 CA119663433 |
788 | I>T | No |
ClinGen gnomAD |
|
|
CA119663434 rs534037657 |
789 | A>T | No |
ClinGen 1000Genomes |
|
|
rs896435221 CA119663435 |
791 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA3278444 rs768393747 |
793 | M>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359945213 rs768393747 |
793 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359945211 rs1561283266 |
793 | M>V | No |
ClinGen Ensembl |
|
|
RCV000442098 CA16604972 rs774164666 |
794 | R>W | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
rs1008469234 CA119663785 |
797 | V>I | No |
ClinGen TOPMed |
|
|
CA119663786 rs1020311729 |
801 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA3278451 rs754364885 |
802 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765404109 CA119663787 |
802 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1318799713 CA359945280 |
803 | P>A | No |
ClinGen gnomAD |
|
|
rs760079769 CA3278452 |
803 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1321878076 CA359945290 |
804 | S>L | No |
ClinGen TOPMed |
|
|
rs988005543 CA119663788 |
808 | T>I | No |
ClinGen gnomAD |
|
|
rs751354754 CA119663789 |
809 | R>C | No |
ClinGen TOPMed gnomAD |
|
|
rs751354754 CA359945317 |
809 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs754821174 CA119663790 |
809 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1322112160 CA359945369 |
817 | V>F | No |
ClinGen gnomAD |
|
|
rs1246647289 CA359945374 |
818 | P>A | No |
ClinGen gnomAD |
|
|
rs1321179563 CA359945382 |
819 | N>T | No |
ClinGen TOPMed |
|
|
CA359945389 rs1469059801 |
820 | R>C | No |
ClinGen TOPMed |
|
|
CA119663793 rs930745915 |
820 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA119663794 rs1022740420 |
823 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1374511488 CA359945406 |
823 | R>S | No |
ClinGen Ensembl |
|
|
CA359945433 rs1249328684 |
826 | T>I | No |
ClinGen gnomAD |
|
|
rs1482600302 CA359945434 |
827 | L>V | No |
ClinGen gnomAD |
|
|
rs1257408851 CA359945448 |
829 | H>D | No |
ClinGen gnomAD |
|
|
rs1157341460 CA359945457 |
830 | I>F | No |
ClinGen gnomAD |
|
|
rs758784027 CA3278455 |
830 | I>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 837 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs970319219 CA119663796 |
838 | A>V | No |
ClinGen TOPMed |
|
|
rs981378029 CA119663797 |
841 | M>L | No |
ClinGen TOPMed |
|
|
CA359945547 rs1357501046 |
843 | T>I | No |
ClinGen gnomAD |
|
|
CA359945561 rs1419833120 |
846 | K>E | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 846 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3278459 rs200376433 |
848 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA359945601 rs1184623630 |
850 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA3278460 rs530583602 |
850 | R>W | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
RCV001264695 rs1749677033 |
857 | E>K | No |
ClinVar dbSNP |
|
|
CA359945652 rs1359714860 |
858 | S>A | No |
ClinGen gnomAD |
|
|
CA359945653 rs1438342709 |
858 | S>Y | No |
ClinGen gnomAD |
|
|
CA119663860 rs1027909153 |
859 | I>V | No |
ClinGen TOPMed |
|
|
rs1169385223 CA359945697 |
864 | H>R | No |
ClinGen TOPMed |
|
|
rs571067306 CA3278464 |
875 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1447006913 CA359945791 |
878 | K>Q | No |
ClinGen gnomAD |
|
|
rs1443947694 CA359945802 |
879 | I>T | No |
ClinGen TOPMed |
|
|
rs201456886 CA119663861 |
879 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1301328030 CA359945805 |
880 | A>T | No |
ClinGen gnomAD |
|
|
CA3278465 rs540036440 |
881 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1350827123 CA359945818 |
882 | L>F | No |
ClinGen gnomAD |
|
|
CA359945826 rs1203630940 |
883 | M>T | No |
ClinGen gnomAD |
|
|
CA3278467 rs771070694 |
887 | P>L | No |
ClinGen ExAC |
|
|
rs1561285216 CA359945863 |
888 | D>G | No |
ClinGen Ensembl |
|
|
rs1580073380 CA359945859 |
888 | D>N | No |
ClinGen Ensembl |
|
|
CA359945879 rs1483596110 |
890 | T>I | No |
ClinGen gnomAD |
|
|
CA359945901 rs1580073403 |
894 | V>L | No |
ClinGen Ensembl |
|
|
CA119664116 rs773561526 |
904 | R>Q | No |
ClinGen gnomAD |
|
|
CA359945998 rs1463615795 |
907 | L>Q | No |
ClinGen gnomAD |
|
|
CA119664117 rs968934369 |
907 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1389523495 CA359946040 |
913 | R>Q | No |
ClinGen gnomAD |
|
|
CA359946049 rs1280269191 |
915 | R>Q | No |
ClinGen TOPMed |
|
|
CA359946106 rs1169488324 |
923 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA359946112 rs1439151169 |
924 | C>S | No |
ClinGen TOPMed gnomAD |
|
|
CA359946111 rs1439151169 |
924 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA359946127 rs1404479901 |
926 | T>I | No |
ClinGen gnomAD |
|
|
CA359946161 rs748023376 |
930 | V>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748023376 CA3278480 |
930 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1054922522 CA119664244 |
934 | D>E | No |
ClinGen TOPMed gnomAD |
|
|
CA359946188 rs1388731395 |
934 | D>G | No |
ClinGen gnomAD |
|
|
rs1332795745 CA359946272 |
946 | P>T | No |
ClinGen gnomAD |
|
|
rs1561287095 CA359946303 |
950 | T>I | No |
ClinGen Ensembl |
|
|
rs1401549561 CA359946305 |
951 | S>G | No |
ClinGen TOPMed |
|
|
rs545343406 CA3278482 COSM3366115 |
952 | I>V | kidney [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC TOPMed gnomAD |
|
CA119664247 rs1013434460 |
957 | V>A | No |
ClinGen TOPMed |
|
|
CA3278484 rs771158020 |
957 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA359946349 rs1351620156 |
958 | M>T | No |
ClinGen TOPMed |
|
|
rs1198755037 CA359946365 |
960 | N>S | No |
ClinGen gnomAD |
|
|
rs898714749 CA119664248 |
962 | T>A | No |
ClinGen Ensembl |
|
|
rs898714749 CA359946376 |
962 | T>P | No |
ClinGen Ensembl |
|
|
CA3278487 rs769694259 |
963 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA119664249 rs774718702 |
964 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs764619986 CA3278490 |
965 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1412183323 CA359946394 |
965 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1412183323 CA359946396 |
965 | R>L | No |
ClinGen TOPMed gnomAD |
|
|
CA359946395 rs1412183323 |
965 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA359946406 rs1487309974 |
967 | H>R | No |
ClinGen TOPMed |
|
|
CA359946447 rs1402175424 |
972 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs1170259343 CA359946444 |
972 | Q>R | No |
ClinGen gnomAD |
|
|
rs1415532445 CA359946482 |
977 | A>V | No |
ClinGen gnomAD |
|
|
CA359946484 rs1315264942 |
978 | S>G | No |
ClinGen gnomAD |
|
|
rs774834890 CA3278491 |
978 | S>I | No |
ClinGen ExAC gnomAD |
|
|
CA359946500 rs1337716402 |
980 | A>D | No |
ClinGen gnomAD |
|
|
rs547354557 CA3278493 |
980 | A>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs561434876 CA3278496 |
981 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA3278495 rs754533320 |
981 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs958090617 CA119664251 |
984 | A>S | No |
ClinGen TOPMed |
|
|
rs1319008736 CA359946522 |
984 | A>V | No |
ClinGen gnomAD |
|
|
CA3278497 rs752694812 |
989 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1282300396 CA359946573 |
991 | D>E | No |
ClinGen gnomAD |
|
|
rs758297289 CA359946575 |
992 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3278498 rs758297289 |
992 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359946605 rs1250843632 |
996 | A>T | No |
ClinGen gnomAD |
|
|
CA3278499 rs373808727 |
998 | S>C | No |
ClinGen ESP ExAC gnomAD |
|
|
CA359946623 rs751381608 |
999 | A>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3278500 COSM3670343 rs751381608 |
999 | A>V | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA359946687 rs1421509600 |
1008 | I>M | No |
ClinGen TOPMed |
|
|
CA359946686 rs1156756213 |
1008 | I>R | No |
ClinGen TOPMed |
|
|
rs967187209 CA119664253 |
1008 | I>V | No |
ClinGen Ensembl |
|
| TCGA novel | 1011 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359946712 rs1388807486 |
1012 | T>A | No |
ClinGen gnomAD |
|
|
rs138406248 CA3278501 |
1012 | T>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA119664254 rs138406248 |
1012 | T>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1398970127 CA359946714 |
1013 | A>T | No |
ClinGen gnomAD |
|
|
CA359946719 rs1385299944 |
1013 | A>V | No |
ClinGen gnomAD |
|
|
CA359946749 rs1268983438 |
1018 | L>I | No |
ClinGen TOPMed |
|
|
CA119664256 rs769976213 |
1019 | D>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1236517352 CA359946757 |
1019 | D>N | No |
ClinGen gnomAD |
|
|
rs376792824 CA3278505 |
1020 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760505023 CA3278506 |
1022 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA119664257 rs1050851270 |
1025 | M>V | No |
ClinGen gnomAD |
|
|
CA359946801 rs1255718329 |
1026 | S>N | No |
ClinGen TOPMed |
|
|
CA119664258 rs757311369 |
1027 | Y>C | No |
ClinGen Ensembl |
|
|
CA359946824 rs1207704884 |
1029 | Q>L | No |
ClinGen gnomAD |
|
|
CA3278507 rs769308131 |
1035 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs931029484 CA119664259 |
1035 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1478021154 CA359946867 |
1036 | Y>C | No |
ClinGen gnomAD |
|
|
rs1334818157 CA359946872 |
1037 | M>V | No |
ClinGen Ensembl |
|
|
CA3278508 rs774957716 |
1040 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs192222164 CA3278509 |
1040 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA359946902 rs1300119358 |
1041 | G>E | No |
ClinGen TOPMed |
|
|
CA3278511 rs776400990 |
1041 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1171631580 CA359946919 |
1044 | M>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1171631580 CA359946920 |
1044 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1361127586 CA359946946 |
1047 | Y>F | No |
ClinGen TOPMed |
|
|
rs1456655410 CA359946956 |
1048 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1445236072 CA359946962 |
1050 | A>T | No |
ClinGen gnomAD |
|
|
rs1580076806 CA359946968 |
1051 | T>P | No |
ClinGen Ensembl |
|
|
CA359946975 rs1391666272 |
1052 | L>V | No |
ClinGen gnomAD |
|
|
CA359946986 rs1176332509 |
1054 | M>V | No |
ClinGen TOPMed |
|
|
rs1580076816 CA359946995 |
1055 | T>A | No |
ClinGen Ensembl |
|
|
CA359947004 rs1373741931 |
1056 | H>R | No |
ClinGen Ensembl |
|
|
CA359947017 rs1580076832 |
1058 | N>T | No |
ClinGen Ensembl |
|
|
CA359947039 rs1284109888 |
1061 | Y>C | No |
ClinGen gnomAD |
|
|
CA119664263 rs898782799 |
1062 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3278514 rs752185820 |
1066 | H>P | No |
ClinGen ExAC gnomAD |
|
|
rs762404087 CA3278515 |
1068 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1242273959 CA359947089 |
1068 | A>V | No |
ClinGen gnomAD |
|
|
rs1264524553 CA359947090 |
1069 | I>L | No |
ClinGen gnomAD |
|
|
rs747444881 CA119664265 |
1075 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
rs911593236 CA119664268 |
1080 | H>N | No |
ClinGen Ensembl |
|
| TCGA novel | 1081 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1187623670 CA359947180 |
1082 | L>I | No |
ClinGen gnomAD |
|
|
rs764052973 CA3278516 |
1082 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs751434688 CA3278517 |
1085 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359947225 rs1418909433 |
1088 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1463195021 CA359947233 |
1090 | I>V | No |
ClinGen gnomAD |
|
|
CA3278518 rs757090562 |
1092 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA3278519 rs780837744 |
1093 | L>R | No |
ClinGen ExAC gnomAD |
|
|
CA359947293 rs1311908769 |
1099 | K>R | No |
ClinGen TOPMed |
|
|
rs1363940041 COSM1438080 CA359947316 |
1102 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA119664271 rs1032825416 |
1107 | I>V | No |
ClinGen Ensembl |
|
|
rs780375063 CA3278522 |
1109 | R>C | No |
ClinGen ExAC |
|
|
CA3278523 rs372466113 |
1109 | R>H | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1110 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1355760634 CA359947369 |
1111 | C>Y | No |
ClinGen gnomAD |
|
|
CA119664272 rs975367308 |
1113 | L>V | No |
ClinGen Ensembl |
|
|
CA359947387 rs768788655 |
1114 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3278524 rs768788655 |
1114 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA119664273 rs1029467329 |
1116 | P>S | No |
ClinGen TOPMed |
|
|
CA359947407 rs1286002241 |
1118 | M>V | No |
ClinGen gnomAD |
|
|
rs1327884760 CA359947426 |
1120 | G>E | No |
ClinGen gnomAD |
|
| TCGA novel | 1123 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs533790571 CA3278525 |
1128 | G>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA359947498 rs1200297741 |
1131 | M>T | No |
ClinGen gnomAD |
|
|
rs1426078931 CA359947521 |
1134 | D>E | No |
ClinGen TOPMed |
|
|
rs1258645752 CA359947535 |
1136 | A>G | No |
ClinGen gnomAD |
|
|
rs1411446086 CA359947547 |
1138 | L>F | No |
ClinGen gnomAD |
|
|
rs1180306525 CA359947542 |
1138 | L>M | No |
ClinGen gnomAD |
|
| TCGA novel | 1140 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359947598 rs1346946485 |
1146 | I>V | No |
ClinGen gnomAD |
|
|
rs371998823 CA3278529 |
1147 | G>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 1151 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA359947635 rs1375846022 |
1151 | N>S | No |
ClinGen gnomAD |
|
|
CA359947639 rs1416337084 |
1152 | T>A | No |
ClinGen gnomAD |
|
|
rs908327460 CA119664275 |
1153 | T>M | No |
ClinGen Ensembl |
|
|
rs1349454564 CA359947664 |
1156 | R>W | No |
ClinGen gnomAD |
|
|
CA359947675 rs1355728601 |
1158 | T>A | No |
ClinGen TOPMed |
|
|
rs1342221689 CA359947720 |
1164 | H>Q | No |
ClinGen TOPMed |
|
|
rs1554041457 CA359947717 RCV000519567 |
1164 | H>R | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA359947802 rs1308499627 |
1175 | A>V | No |
ClinGen gnomAD |
|
|
rs201456700 CA119664279 |
1176 | R>Q | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA359947811 rs1486870596 |
1177 | E>A | No |
ClinGen gnomAD |
|
|
CA359947808 rs1281597473 |
1177 | E>K | No |
ClinGen gnomAD |
|
|
rs1203405019 CA359947818 |
1178 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA359947819 rs1251411688 |
1178 | T>N | No |
ClinGen gnomAD |
|
|
CA3278531 rs775086998 |
1180 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA359947845 rs1488541937 |
1182 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 1182 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA119664281 rs930935956 |
1183 | H>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1580077170 CA359947855 |
1183 | H>R | No |
ClinGen Ensembl |
|
|
rs1432599141 CA359947860 |
1184 | D>Y | No |
ClinGen gnomAD |
|
|
rs1561287772 CA359947866 |
1185 | G>R | No |
ClinGen Ensembl |
|
|
rs920093349 CA119664282 |
1187 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA359947905 rs1436393669 |
1190 | T>I | No |
ClinGen gnomAD |
|
|
CA359947912 rs1305922709 |
1191 | Q>R | No |
ClinGen gnomAD |
|
|
rs1353617498 CA359947928 |
1193 | I>T | No |
ClinGen gnomAD |
|
|
CA359947983 rs1299455174 |
1201 | K>E | No |
ClinGen gnomAD |
|
|
CA359948040 rs1438208467 |
1208 | M>I | No |
ClinGen TOPMed |
|
|
rs916306349 CA119664283 |
1208 | M>T | No |
ClinGen TOPMed |
|
|
CA119664284 rs896708412 |
1211 | R>Q | No |
ClinGen Ensembl |
2 associated diseases with Q9HCJ5
[MIM: 603671]: Acromelic frontonasal dysostosis (AFND)
A rare variant form of frontonasal dysplasia, an array of abnormalities affecting the eyes, forehead and nose and linked to midfacial dysraphia. The clinical picture is highly variable. Major findings include true ocular hypertelorism, broadening of the nasal root, median facial cleft affecting the nose and/or upper lip and palate, unilateral or bilateral clefting of the alae nasi, lack of formation of the nasal tip, anterior cranium bifidum occultum, a V-shaped or widow's peak frontal hairline. AFND is characterized by the association of frontonasal malformations with various combinations of polydactyly, tibial hypoplasia, epibulbar dermoid, encephalocoele, corpus callosum agenesis and Dandy-Walker malformation. {ECO:0000269|PubMed:25105228}. Note=The disease is caused by variants affecting the gene represented in this entry.
[MIM: 617865]: Neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features (NEDMAGA)
An autosomal dominant neurodevelopmental disorder characterized by infantile-onset global developmental delay, severe to profound intellectual disability, mildly delayed walking with broad-based and unsteady gait, and absence of meaningful language. Patients have features of autism, with repetitive behaviors and poor communication, but usually are socially reactive and have a happy demeanor. More variable neurologic features include mild seizures, spasticity, and peripheral neuropathy. {ECO:0000269|PubMed:29198722}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A rare variant form of frontonasal dysplasia, an array of abnormalities affecting the eyes, forehead and nose and linked to midfacial dysraphia. The clinical picture is highly variable. Major findings include true ocular hypertelorism, broadening of the nasal root, median facial cleft affecting the nose and/or upper lip and palate, unilateral or bilateral clefting of the alae nasi, lack of formation of the nasal tip, anterior cranium bifidum occultum, a V-shaped or widow's peak frontal hairline. AFND is characterized by the association of frontonasal malformations with various combinations of polydactyly, tibial hypoplasia, epibulbar dermoid, encephalocoele, corpus callosum agenesis and Dandy-Walker malformation. {ECO:0000269|PubMed:25105228}. Note=The disease is caused by variants affecting the gene represented in this entry.
- An autosomal dominant neurodevelopmental disorder characterized by infantile-onset global developmental delay, severe to profound intellectual disability, mildly delayed walking with broad-based and unsteady gait, and absence of meaningful language. Patients have features of autism, with repetitive behaviors and poor communication, but usually are socially reactive and have a happy demeanor. More variable neurologic features include mild seizures, spasticity, and peripheral neuropathy. {ECO:0000269|PubMed:29198722}. Note=The disease is caused by variants affecting the gene represented in this entry.
1 regional properties for Q9HCJ5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, SWIM-type | 246 - 283 | IPR007527 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| Cul2-RING ubiquitin ligase complex | A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| zinc ion binding | Binding to a zinc ion (Zn). |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| striatal medium spiny neuron differentiation | The process in which a relatively unspecialized cell acquires specialized features of a medium spiny neuron residing in the striatum. |
3 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9H7M6 | ZSWIM4 | Zinc finger SWIM domain-containing protein 4 | Homo sapiens (Human) | PR |
| Q80TC6 | Zswim5 | Zinc finger SWIM domain-containing protein 5 | Mus musculus (Mouse) | PR |
| Q8C7B8 | Zswim4 | Zinc finger SWIM domain-containing protein 4 | Mus musculus (Mouse) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAERGQQPPP | AKRLCCRPGG | GGGGGGSSGG | GGGAGGGYSS | ACRPGPRAGG | AAAAAACGGG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| AALGLLPPGK | TQSPESLLDI | AARRVAEKWP | FQRVEERFER | IPEPVQRRIV | YWSFPRSERE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ICMYSSFNTG | GGAAGGPGDD | SGGGGGAGGG | GGGGSSSSPA | ATSAAATSAA | AAAAAAAAAA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AAAAGAGAPS | VGAAGAADGG | DETRLPFRRG | IALLESGCVD | NVLQVGFHLS | GTVTEPAIQS |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EPETVCNVAI | SFDRCKITSV | TCSCGNKDIF | YCAHVVALSL | YRIRKPDQVK | LHLPISETLF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QMNRDQLQKF | VQYLITVHHT | EVLPTAQKLA | DEILSQNSEI | NQVHGAPDPT | AGASIDDENC |
| 370 | 380 | 390 | 400 | 410 | 420 |
| WHLDEEQVQE | QVKLFLSQGG | YHGSGKQLNL | LFAKVREMLK | MRDSNGARML | TLITEQFMAD |
| 430 | 440 | 450 | 460 | 470 | 480 |
| PRLSLWRQQG | TAMTDKYRQL | WDELGALWMC | IVLNPHCKLE | QKASWLKQLK | KWNSVDVCPW |
| 490 | 500 | 510 | 520 | 530 | 540 |
| EDGNHGSELP | NLTNALPQGA | NANQDSSNRP | HRTVFTRAIE | ACDLHWQDSH | LQHIISSDLY |
| 550 | 560 | 570 | 580 | 590 | 600 |
| TNYCYHDDTE | NSLFDSRGWP | LWHEHVPTAC | ARVDALRSHG | YPREALRLAI | AIVNTLRRQQ |
| 610 | 620 | 630 | 640 | 650 | 660 |
| QKQLEMFRTQ | KKELPHKNIT | SITNLEGWVG | HPLDPVGTLF | SSLMEACRID | DENLSGFSDF |
| 670 | 680 | 690 | 700 | 710 | 720 |
| TENMGQCKSL | EYQHLPAHKF | LEEGESYLTL | AVEVALIGLG | QQRIMPDGLY | TQEKVCRNEE |
| 730 | 740 | 750 | 760 | 770 | 780 |
| QLISKLQEIE | LDDTLVKIFR | KQAVFLLEAG | PYSGLGEIIH | RESVPMHTFA | KYLFTSLLPH |
| 790 | 800 | 810 | 820 | 830 | 840 |
| DAELAYKIAL | RAMRLLVLES | TAPSGDLTRP | HHIASVVPNR | YPRWFTLSHI | ESQQCELAST |
| 850 | 860 | 870 | 880 | 890 | 900 |
| MLTAAKGDVR | RLETVLESIQ | KNIHSSSHIF | KLAQDAFKIA | TLMDSLPDIT | LLKVSLELGL |
| 910 | 920 | 930 | 940 | 950 | 960 |
| QVMRMTLSTL | NWRRREMVRW | LVTCATEVGV | YALDSIMQTW | FTLFTPTEAT | SIVATTVMSN |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| STIVRLHLDC | HQQEKLASSA | RTLALQCAMK | DPQNCALSAL | TLCEKDHIAF | ETAYQIVLDA |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| ATTGMSYTQL | FTIARYMEHR | GYPMRAYKLA | TLAMTHLNLS | YNQDTHPAIN | DVLWACALSH |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| SLGKNELAAI | IPLVVKSVKC | ATVLSDILRR | CTLTTPGMVG | LHGRRNSGKL | MSLDKAPLRQ |
| 1150 | 1160 | 1170 | 1180 | 1190 | 1200 |
| LLDATIGAYI | NTTHSRLTHI | SPRHYSEFIE | FLSKARETFL | MAHDGHIQFT | QFIDNLKQIY |
| 1210 | |||||
| KGKKKLMMLV | RERFG |