Q9FX25

PR
Gene name
ARF13 (At1g34170, F12G12.1, F23M19.15)
Protein name
Auxin response factor 13
Names
Species
Arabidopsis thaliana (Mouse-ear cress)
KEGG Pathway
ath:AT1G34170
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

445-526 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q9FX25

Entry ID Method Resolution Chain Position Source
AF-Q9FX25-F1 Predicted AlphaFoldDB

No variants for Q9FX25

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q9FX25

No associated diseases with Q9FX25

No regional properties for Q9FX25

Type Name Position InterPro Accession
No domain, repeats, and functional sites for Q9FX25

Functions

Description
EC Number
Subcellular Localization
  • Nucleus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

1 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

2 GO annotations of biological process

Name Definition
auxin-activated signaling pathway The series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

2 homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
Q9XED8 ARF9 Auxin response factor 9 Arabidopsis thaliana (Mouse-ear cress) PR
Q9SKN5 ARF10 Auxin response factor 10 Arabidopsis thaliana (Mouse-ear cress) PR
10 20 30 40 50 60
MENNGEMNAQ PELSVDITKT YMYEKLWNIC AGPLCVLPKP GEKVYYFPQG HIELIENSTR
70 80 90 100 110 120
DELDHIRPIF DLPSKLRCRV VAIDRKVDKN TDEVYAQISL MPDTTEVMTH NTTMDTRRPI
130 140 150 160 170 180
VYFFSKILTA SDVSLSGGLI IPKQYAIECF PPLDMSQPIS TQNLVAKDLY GQEWSFKHVF
190 200 210 220 230 240
RGTPQRHMFT SGGGWSVFAT TKRLIVGDIF VLLRGENGEL RFGIRRAKHQ QGHIPSSVIS
250 260 270 280 290 300
ANCMQHGVIA SVVNAFKTKC MFNVVYKPSS SQFVISYDKF VDAMNNNYIV GSRFRMQFEG
310 320 330 340 350 360
KDFSEKRYDG TIIGVNDMSP HWKDSEWRSL KVQWDELSPF LRPNQVSPWD IEHLIPSSDI
370 380 390 400 410 420
SQSSLKKKKH WLQLNEIGAT LSNLWTCQEI GQRSMNSPIS VPEFSYPNAI EDSKFLSGLL
430 440 450 460 470 480
LNHSLLAIPN ENYNSDQMIQ PRKEDITTEA TTSCLLFGVD LTKVSKSKDS ICPIESCKKS
490 500 510 520 530 540
LPQDKKFDQT QPLRSPKEVQ STEFNFTRSR IKVHMQGVAI SRAVDLTAMH GYNQLIQKLE
550 560 570 580 590 600
ELFDLKDELR TRNQWEIVFT NNEGAEMLVG DDPWPEFCNM AKRIFICSKE EIKKMKLKNK
610 620
FFQPESKALT SSDVPPNVTD N