Q9FWY9
Gene name |
GATL5 (At1g02720, T14P4.1, T14P4.8) |
Protein name |
Probable galacturonosyltransferase-like 5 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G02720 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FWY9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FWY9-F1 | Predicted | AlphaFoldDB |
20 variants for Q9FWY9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| ENSVATH01006694 | 41 | D>E | No | 1000Genomes | |
| ENSVATH04509667 | 52 | S>T | No | 1000Genomes | |
| ENSVATH13850009 | 55 | R>K | No | 1000Genomes | |
| ENSVATH00003121 | 61 | R>H | No | 1000Genomes | |
| ENSVATH10496688 | 69 | S>P | No | 1000Genomes | |
| ENSVATH04509668 | 71 | E>D | No | 1000Genomes | |
| tmp_1_592404_C_G | 97 | A>G | No | 1000Genomes | |
| ENSVATH04509669 | 97 | A>S | No | 1000Genomes | |
| ENSVATH13850010 | 99 | V>A | No | 1000Genomes | |
| ENSVATH04509670 | 99 | V>I | No | 1000Genomes | |
| ENSVATH04509671 | 134 | P>L | No | 1000Genomes | |
| tmp_1_592534_A_C | 140 | K>N | No | 1000Genomes | |
| ENSVATH10496689 | 216 | H>L | No | 1000Genomes | |
| tmp_1_592771_C_A | 219 | F>L | No | 1000Genomes | |
| tmp_1_592782_T_A | 223 | F>Y | No | 1000Genomes | |
| ENSVATH00003125 | 231 | K>E | No | 1000Genomes | |
| tmp_1_592826_A_G | 238 | K>E | No | 1000Genomes | |
| ENSVATH00003127 | 259 | Q>R | No | 1000Genomes | |
| ENSVATH01006699 | 275 | I>M | No | 1000Genomes | |
| ENSVATH13850012 | 350 | L>F | No | 1000Genomes |
No associated diseases with Q9FWY9
No regional properties for Q9FWY9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q9FWY9 | |||
4 GO annotations of cellular component
| Name | Definition |
|---|---|
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| polygalacturonate 4-alpha-galacturonosyltransferase activity | Catalysis of the reaction: UDP-D-galacturonate + 1,4-alpha-D-galacturonosyl(n) = 1,4-alpha-D-galacturonosyl(n+1) + UDP. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| mucilage biosynthetic process involved in seed coat development | The chemical reactions and pathways resulting in the formation of mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development. |
| mucilage pectin metabolic process | The chemical reactions and pathways involving the pectin component of mucilage. |
| pectin biosynthetic process | The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues. |
| plant-type cell wall assembly | The aggregation, arrangement and bonding together of a set of components to form a cellulose- and pectin-containing cell wall. |
4 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9H1C3 | GLT8D2 | Glycosyltransferase 8 domain-containing protein 2 | Homo sapiens (Human) | PR |
| Q9FH36 | GAUT12 | Probable galacturonosyltransferase 12 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q9LE59 | GAUT1 | Polygalacturonate 4-alpha-galacturonosyltransferase | Arabidopsis thaliana (Mouse-ear cress) | PR |
| Q28I33 | glt8d1 | Glycosyltransferase 8 domain-containing protein 1 | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MHWITRFSAF | FSAALAMILL | SPSLQSFSPA | AAIRSSHPYA | DEFKPQQNSD | YSSFRESPMF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RNAEQCRSSG | EDSGVCNPNL | VHVAITLDID | YLRGSIAAVN | SILQHSMCPQ | SVFFHFLVSS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ESQNLESLIR | STFPKLTNLK | IYYFAPETVQ | SLISSSVRQA | LEQPLNYARN | YLADLLEPCV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KRVIYLDSDL | VVVDDIVKLW | KTGLGQRTIG | APEYCHANFT | KYFTGGFWSD | KRFNGTFKGR |
| 250 | 260 | 270 | 280 | 290 | 300 |
| NPCYFNTGVM | VIDLKKWRQF | RFTKRIEKWM | EIQKIERIYE | LGSLPPFLLV | FAGHVAPISH |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RWNQHGLGGD | NVRGSCRDLH | SGPVSLLHWS | GSGKPWLRLD | SKLPCPLDTL | WAPYDLYKHS |
| H |