Q9FFL1
Gene name |
RMV1 (At5g05630, MJJ3.2) |
Protein name |
Polyamine transporter RMV1 |
Names |
Protein RESISTANT TO METHYL VIOLOGEN 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT5G05630 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q9FFL1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q9FFL1-F1 | Predicted | AlphaFoldDB |
36 variants for Q9FFL1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_5_1682559_C_A | 7 | P>T | No | 1000Genomes | |
| tmp_5_1682569_A_C | 10 | D>A | No | 1000Genomes | |
| ENSVATH03027016 | 22 | N>H | No | 1000Genomes | |
| tmp_5_1682629_T_C | 30 | I>T | No | 1000Genomes | |
| ENSVATH03027017 | 39 | P>A | No | 1000Genomes | |
| ENSVATH06927172 | 61 | L>V | No | 1000Genomes | |
| ENSVATH06927173 | 103 | I>F | No | 1000Genomes | |
| ENSVATH06927174 | 107 | M>L | No | 1000Genomes | |
| ENSVATH03027020 | 115 | G>C | No | 1000Genomes | |
| ENSVATH00607917 | 123 | L>S | No | 1000Genomes | |
| ENSVATH03027023 | 125 | M>L | No | 1000Genomes | |
| tmp_5_1682997_C_T | 153 | L>F | No | 1000Genomes | |
| tmp_5_1683024_A_T | 162 | I>L | No | 1000Genomes | |
| tmp_5_1683141_T_G | 201 | F>V | No | 1000Genomes | |
| tmp_5_1683145_C_T | 202 | S>F | No | 1000Genomes | |
| ENSVATH10591634 | 212 | M>I | No | 1000Genomes | |
| ENSVATH06927175 | 255 | T>M | No | 1000Genomes | |
| ENSVATH00607921 | 255 | T>S | No | 1000Genomes | |
| ENSVATH06927176 | 260 | N>T | No | 1000Genomes | |
| ENSVATH10591667 | 287 | G>V | No | 1000Genomes | |
| tmp_5_1683408_G_A | 290 | A>T | No | 1000Genomes | |
| ENSVATH06927177 | 294 | D>A | No | 1000Genomes | |
| ENSVATH03027026 | 313 | V>A | No | 1000Genomes | |
| ENSVATH06927179 | 328 | M>L | No | 1000Genomes | |
| tmp_5_1683528_A_C | 330 | M>L | No | 1000Genomes | |
| tmp_5_1683575_G_A | 345 | M>I | No | 1000Genomes | |
| ENSVATH10591668 | 353 | E>V | No | 1000Genomes | |
| ENSVATH00607922 | 362 | R>G | No | 1000Genomes | |
| ENSVATH00607924 | 377 | I>F | No | 1000Genomes | |
| ENSVATH10591670 | 429 | V>I | No | 1000Genomes | |
| ENSVATH13932562 | 434 | P>L | No | 1000Genomes | |
| tmp_5_1683883_T_G | 448 | L>R | No | 1000Genomes | |
| ENSVATH06927181 | 459 | V>L | No | 1000Genomes | |
| tmp_5_1683924_C_T | 462 | L>F | No | 1000Genomes | |
| tmp_5_1683994_T_A | 485 | L>Q | No | 1000Genomes | |
| tmp_5_1684007_G_T | 489 | M>I | No | 1000Genomes |
No associated diseases with Q9FFL1
4 regional properties for Q9FFL1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, RING-type | 18 - 58 | IPR001841-1 |
| domain | Zinc finger, RING-type | 159 - 192 | IPR001841-2 |
| domain | Drought induced 19 protein type, zinc-binding domain | 156 - 216 | IPR008598 |
| domain | Zinc finger C2HC RNF-type | 80 - 112 | IPR034734 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| polyamine transmembrane transporter activity | Enables the transfer of polyamines, organic compounds containing two or more amino groups, from one side of a membrane to the other. |
| symporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cadaverine transport | The directed movement of cadaverine, 1,5-pentanediamine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| polyamine transport | The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
| response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. |
3 homologous proteins in AiPD
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTELSSPNLD | SASQKPRIST | ENPPPPPPHI | SIGVTTGDPA | TSPARTVNQI | KKITVLPLVF |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LIFYEVSGGP | FGIEDSVKAA | GPLLAIVGFI | VFPFIWSIPE | ALITAEMGTM | FPENGGYVVW |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VTLAMGPYWG | FQQGWVKWLS | GVIDNALYPI | LFLDYLKSGI | PILGSGIPRV | AAILVLTVAL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TYLNYRGLSI | VGVAAVLLGV | FSILPFVVMS | FMSIPKLKPS | RWLVVSKKMK | GVNWSLYLNT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LFWNLNYWDS | VSTLTGEVEN | PSKTLPRALF | YALLLVVFSY | IFPVLTGTGA | IALDQKLWTD |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GYFADIGKVI | GGVWLGWWIQ | AAAATSNMGM | FLAEMSSDSF | QLLGMAERGM | LPEVFAKRSR |
| 370 | 380 | 390 | 400 | 410 | 420 |
| YRTPWVGILF | SASGVIILSW | LSFQEIVAAE | NLLYCFGMVL | EFITFVRLRM | KYPAASRPFK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| IPVGVLGSVL | MCIPPTVLIG | VIMAFTNLKV | ALVSLAAIVI | GLVLQPCLKQ | VEKKGWLKFS |
| TSSHLPNLME |