Q9BYG3
Gene name |
NIFK (MKI67IP, NOPP34) |
Protein name |
MKI67 FHA domain-interacting nucleolar phosphoprotein |
Names |
Nucleolar phosphoprotein Nopp34, Nucleolar protein interacting with the FHA domain of pKI-67, hNIFK |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:84365 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
26 structures for Q9BYG3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 2AFF | NMR | - | B | 226-269 | PDB |
| 8FKP | EM | 285 A | SH | 1-293 | PDB |
| 8FKQ | EM | 276 A | SH | 1-293 | PDB |
| 8FKR | EM | 289 A | SH | 1-293 | PDB |
| 8FKS | EM | 288 A | SH | 1-293 | PDB |
| 8FKT | EM | 281 A | SH | 1-293 | PDB |
| 8FKU | EM | 282 A | SH | 1-293 | PDB |
| 8FKV | EM | 247 A | SH | 1-293 | PDB |
| 8FKW | EM | 250 A | SH | 1-293 | PDB |
| 8FKX | EM | 259 A | SH | 1-293 | PDB |
| 8FKY | EM | 267 A | SH | 1-293 | PDB |
| 8FKZ | EM | 304 A | SH | 1-293 | PDB |
| 8FL2 | EM | 267 A | SH | 1-293 | PDB |
| 8FL3 | EM | 253 A | SH | 1-293 | PDB |
| 8FL6 | EM | 262 A | SH | 1-293 | PDB |
| 8FL7 | EM | 255 A | SH | 1-293 | PDB |
| 8FLA | EM | 263 A | SH | 1-293 | PDB |
| 8FLB | EM | 255 A | SH | 1-293 | PDB |
| 8FLD | EM | 258 A | SH | 1-293 | PDB |
| 8FLE | EM | 248 A | SH | 1-293 | PDB |
| 8INE | EM | 320 A | t | 1-293 | PDB |
| 8INF | EM | 300 A | t | 1-293 | PDB |
| 8IPX | EM | 430 A | t | 1-293 | PDB |
| 8IPY | EM | 320 A | t | 1-293 | PDB |
| 8IR3 | EM | 350 A | t | 1-293 | PDB |
| AF-Q9BYG3-F1 | Predicted | AlphaFoldDB |
290 variants for Q9BYG3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs1324714377 | 1 | M>? | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1371053845 CA348184448 |
2 | A>E | No |
ClinGen TOPMed |
|
|
rs1377184689 CA348184445 |
3 | T>N | No |
ClinGen gnomAD |
|
|
rs776277705 CA1855186 |
3 | T>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 4 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348184433 rs1296322352 |
5 | S>A | No |
ClinGen gnomAD |
|
|
rs767800636 CA1855185 |
5 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA54486408 rs944946517 |
7 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA1855183 rs774765141 |
7 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs1187676264 CA348184419 |
8 | A>T | No |
ClinGen gnomAD |
|
|
rs1219994570 CA348184414 |
8 | A>V | No |
ClinGen TOPMed |
|
|
rs866790065 CA54486388 |
9 | G>R | No |
ClinGen Ensembl |
|
|
rs769809873 CA1855179 |
10 | P>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 10 | P>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1855178 rs140235533 |
11 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs754753056 CA1855176 |
12 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA54486352 rs11556736 |
14 | L>F | No |
ClinGen gnomAD |
|
|
rs11556736 CA348184386 |
14 | L>V | No |
ClinGen gnomAD |
|
|
CA348184382 rs1319478498 |
15 | N>H | No |
ClinGen gnomAD |
|
|
CA54486349 rs1043060589 |
16 | P>L | No |
ClinGen TOPMed |
|
|
rs750327736 CA1855172 |
17 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1385597160 CA348184355 |
18 | E>D | No |
ClinGen gnomAD |
|
|
CA348184360 rs1399270357 |
18 | E>K | No |
ClinGen gnomAD |
|
|
CA54486314 rs757374305 |
19 | D>N | No |
ClinGen gnomAD |
|
|
CA348184350 rs1455475373 |
19 | D>V | No |
ClinGen gnomAD |
|
|
rs1348344202 CA348184339 |
21 | E>* | No |
ClinGen TOPMed gnomAD |
|
|
rs894554020 CA54486311 |
21 | E>A | No |
ClinGen TOPMed |
|
|
CA54486307 rs986151288 |
21 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1348344202 CA348184341 |
21 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA1855170 rs756785826 |
23 | Q>H | No |
ClinGen ExAC gnomAD |
|
|
CA54486273 rs938789584 |
24 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA348184320 rs1462263187 |
24 | K>Q | No |
ClinGen gnomAD |
|
|
CA348184316 TCGA novel rs1420422769 |
24 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen gnomAD |
|
CA348184313 rs1428377823 |
25 | E>K | No |
ClinGen gnomAD |
|
|
rs1573377136 CA348184300 |
26 | V>G | No |
ClinGen Ensembl |
|
|
CA348184289 rs1353418350 |
28 | Q>R | No |
ClinGen gnomAD |
|
|
rs1487249058 CA348184282 |
29 | V>A | No |
ClinGen gnomAD |
|
|
rs759862125 CA1855167 |
29 | V>I | No |
ClinGen ExAC TOPMed |
|
|
CA348184276 rs201646641 |
30 | R>L | No |
ClinGen gnomAD |
|
|
CA54486257 rs201646641 |
30 | R>P | No |
ClinGen gnomAD |
|
|
rs1395070505 CA348184273 |
31 | K>E | No |
ClinGen TOPMed |
|
|
CA348184272 rs1462593906 |
31 | K>R | No |
ClinGen TOPMed |
|
|
CA54486256 rs552559583 |
32 | R>C | No |
ClinGen 1000Genomes TOPMed |
|
|
rs552559583 CA348184266 |
32 | R>G | No |
ClinGen 1000Genomes TOPMed |
|
|
rs754108598 COSM3933306 CA54486255 |
32 | R>H | urinary_tract [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA1855165 rs766932290 |
33 | I>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1855166 rs150674424 |
33 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348184254 rs1375939123 |
34 | T>S | No |
ClinGen TOPMed |
|
|
CA1855164 rs763466940 |
35 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs566829543 CA1855163 |
35 | Q>R | No |
ClinGen 1000Genomes ExAC |
|
|
rs768559295 CA1855139 |
36 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA535623747 rs1397613475 |
37 | K>I | No |
ClinGen gnomAD |
|
|
CA535623749 rs1319035393 |
37 | K>R | No |
ClinGen gnomAD |
|
|
rs1464937139 CA348184211 |
39 | Q>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 41 | Q>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1855138 rs760955520 |
41 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs772012671 CA1855136 |
43 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs779030291 CA1855134 |
44 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs779030291 CA1855135 |
44 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs185696375 CA54485465 |
47 | V>A | No |
ClinGen Ensembl |
|
|
rs748810988 CA1855132 |
48 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA1855130 rs552347792 |
49 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM1399143 CA54485451 rs182886627 |
50 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
| TCGA novel | 50 | R>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1855129 rs747866985 |
51 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs1350200485 CA348184132 |
52 | L>P | No |
ClinGen gnomAD |
|
|
rs1450314907 CA348184126 |
53 | P>R | No |
ClinGen TOPMed |
|
|
CA1855126 rs750755805 |
57 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs75350722 CA1855127 |
57 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA54485433 rs987185534 |
57 | D>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1413398077 CA348184100 |
58 | E>K | No |
ClinGen gnomAD |
|
|
CA1855125 rs376581533 |
59 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA54485428 rs11556739 |
61 | I>T | No |
ClinGen Ensembl |
|
|
rs187455320 CA54485418 |
62 | F>L | No |
ClinGen Ensembl |
|
|
rs1276573609 CA348184065 |
63 | S>P | No |
ClinGen TOPMed |
|
|
CA54485394 rs975345163 |
64 | Y>* | No |
ClinGen Ensembl |
|
|
rs754229937 CA1855123 |
64 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs764264805 CA1855122 |
65 | F>V | No |
ClinGen ExAC gnomAD |
|
|
rs1365188166 CA348184044 |
66 | S>C | No |
ClinGen gnomAD |
|
|
CA348184038 rs1185135852 |
67 | Q>P | No |
ClinGen gnomAD |
|
|
CA54485384 rs182249746 |
68 | F>C | No |
ClinGen Ensembl |
|
|
rs760620343 CA1855121 |
69 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775902210 CA1855120 |
70 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs767813609 CA348184003 |
73 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs192791846 CA1855118 |
73 | R>Q | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs767813609 CA1855119 |
73 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1855116 rs770578698 |
75 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA348183977 rs1281553557 |
77 | S>C | No |
ClinGen TOPMed gnomAD |
|
|
CA348183978 rs1281553557 |
77 | S>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs772986974 CA1855114 |
79 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200294058 CA54485371 |
80 | K>E | No |
ClinGen Ensembl |
|
|
rs769370287 CA1855113 |
80 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA348183955 rs1294320546 |
81 | R>G | No |
ClinGen gnomAD |
|
| TCGA novel | 81 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348183952 rs1417106453 |
81 | R>T | No |
ClinGen gnomAD |
|
|
CA1855088 rs778406527 |
84 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs144082324 CA1855087 |
87 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348183894 rs1334395720 |
88 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs985554041 CA348183875 |
91 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA54483123 rs985554041 |
91 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
CA1855086 rs144818693 |
92 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1855084 rs755071631 |
93 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs751855520 CA1855083 |
94 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs60119699 CA54483102 |
95 | S>F | No |
ClinGen Ensembl |
|
|
CA54483105 rs113901525 |
95 | S>P | No |
ClinGen Ensembl |
|
|
rs189363140 CA54483084 |
98 | V>I | No |
ClinGen Ensembl |
|
|
rs750181605 CA1855080 |
99 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA348183807 rs1324755351 |
101 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs761741319 CA1855078 |
102 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs768177439 CA1855076 |
103 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768177439 CA1855077 |
103 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1353670262 CA348183792 |
104 | E>A | No |
ClinGen gnomAD |
|
|
rs1480090793 CA348183795 |
104 | E>K | No |
ClinGen TOPMed |
|
|
CA1855073 rs537381990 |
106 | M>I | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA348183779 rs370019041 |
106 | M>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1855074 rs370019041 |
106 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs760152882 CA1855075 |
106 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA1855071 rs200871910 |
108 | N>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA1855072 rs749717572 |
108 | N>Y | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 109 | Y>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348183747 rs1395895669 |
111 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1395895669 CA348183746 |
111 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs4848158 CA54483041 |
114 | R>T | No |
ClinGen Ensembl |
|
|
CA348183701 rs367711469 |
117 | E>D | No |
ClinGen ESP ExAC gnomAD |
|
|
CA1855069 rs748700878 |
117 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1205669218 CA348183707 |
117 | E>K | No |
ClinGen gnomAD |
|
| TCGA novel | 119 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA348183671 rs1344809784 |
120 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1160163808 CA348183656 |
121 | M>I | No |
ClinGen gnomAD |
|
|
CA54482502 rs534245053 |
122 | P>S | No |
ClinGen 1000Genomes |
|
|
rs1416083657 CA348183648 |
123 | P>S | No |
ClinGen gnomAD |
|
|
CA1855045 rs758463007 |
127 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1855043 rs779084152 |
129 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA1855042 rs757081102 |
129 | E>V | No |
ClinGen ExAC gnomAD |
|
|
CA348183597 rs1242306414 |
130 | L>P | No |
ClinGen gnomAD |
|
|
rs1242306414 CA348183596 |
130 | L>R | No |
ClinGen gnomAD |
|
|
rs1210160617 CA348183594 |
131 | F>L | No |
ClinGen gnomAD |
|
|
rs186769629 CA54482479 |
133 | D>H | No |
ClinGen Ensembl |
|
|
rs184802204 CA54482474 |
135 | N>D | No |
ClinGen Ensembl |
|
|
rs764073561 CA1855039 |
137 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1402129510 CA348183522 |
140 | Q>H | No |
ClinGen TOPMed |
|
|
CA54482452 rs927610465 |
141 | P>L | No |
ClinGen TOPMed |
|
|
CA1855037 rs752616703 |
142 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA54482440 rs183475059 |
143 | Y>N | No |
ClinGen Ensembl |
|
|
rs17852212 VAR_027182 CA54482435 |
144 | P>Q | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs548777022 CA1855035 |
145 | S>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs192100700 CA54482424 |
146 | V>A | No |
ClinGen Ensembl |
|
|
CA348183492 rs1289548450 |
146 | V>L | No |
ClinGen gnomAD |
|
|
rs905434481 CA54482420 |
147 | K>N | No |
ClinGen Ensembl |
|
|
rs773927967 CA1855034 |
148 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs187982757 CA54482417 |
148 | R>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs766099870 CA1855033 |
149 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs182148570 CA1855031 |
151 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs182148570 CA1855030 |
151 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1855032 rs762335388 |
151 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA1855028 rs776013950 |
153 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772093233 CA1855027 COSM218643 |
153 | R>Q | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs776013950 CA1855029 |
153 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1855023 rs185431138 |
160 | R>Q | Variant assessed as Somatic; 9.239e-05 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA1855024 rs779170193 |
160 | R>W | No |
ClinGen ExAC gnomAD |
|
|
rs151148873 CA1855022 |
163 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145402818 CA54482346 |
164 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA1855021 rs145402818 |
164 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755901483 CA1855020 |
164 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1249439586 CA348183379 |
165 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1489364615 CA348183383 |
165 | F>L | No |
ClinGen gnomAD |
|
|
rs752601808 CA1855019 |
166 | K>* | No |
ClinGen ExAC gnomAD |
|
|
rs752601808 CA348183375 |
166 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1298339651 CA348183366 |
167 | K>R | No |
ClinGen gnomAD |
|
|
rs549651677 CA1855018 |
169 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs754491308 CA1855017 |
170 | R>* | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 172 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201317100 CA1855015 |
173 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348183298 rs1374144657 |
177 | A>T | No |
ClinGen gnomAD |
|
|
rs1169925701 CA348183293 |
177 | A>V | No |
ClinGen gnomAD |
|
|
rs1171570579 CA348183285 |
178 | K>N | No |
ClinGen TOPMed |
|
|
rs762710813 CA1855013 |
179 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs979281738 CA54482314 |
179 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA1855012 rs375879932 |
181 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1434571237 CA348183262 |
182 | D>G | No |
ClinGen gnomAD |
|
|
rs140089025 CA1855011 |
183 | Y>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA348183247 rs1195018750 |
184 | D>G | No |
ClinGen gnomAD |
|
|
rs1207110611 CA348183250 |
184 | D>H | No |
ClinGen gnomAD |
|
|
rs1207110611 CA348183251 |
184 | D>N | No |
ClinGen gnomAD |
|
|
rs564097100 CA54482297 |
186 | P>L | No |
ClinGen 1000Genomes |
|
|
rs761077196 CA1855010 |
186 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1855008 rs772627155 |
187 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs772627155 CA1855009 |
187 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348183204 rs1191717856 |
189 | I>T | No |
ClinGen TOPMed |
|
|
CA348183194 rs1324129461 |
191 | Q>K | No |
ClinGen gnomAD |
|
|
rs1317044728 CA348183182 |
192 | K>R | No |
ClinGen gnomAD |
|
|
CA1854966 rs766844487 |
193 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773329467 CA1854964 |
194 | E>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1006046 CA1854963 rs374862911 |
201 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs762100891 CA1854962 |
201 | R>H | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 202 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1474399573 CA348183110 |
203 | T>A | No |
ClinGen gnomAD |
|
|
CA1854961 rs377016579 |
203 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs775634772 CA1854958 |
204 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs746767515 CA1854959 |
204 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA54480975 rs989799905 |
205 | T>A | No |
ClinGen Ensembl |
|
|
rs1291071543 CA348183077 |
208 | Q>H | No |
ClinGen TOPMed gnomAD |
|
|
rs901656732 CA54480881 |
209 | V>I | No |
ClinGen Ensembl |
|
|
CA1854932 rs139750791 |
211 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA1854931 rs141833997 |
211 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA348183049 rs141833997 |
211 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1353218785 CA348183025 |
214 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA348183028 rs1468140469 |
214 | K>R | No |
ClinGen TOPMed |
|
|
CA1854929 rs780403103 |
216 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs779254748 CA1854927 |
216 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758724073 CA1854928 |
216 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1181292658 CA348183011 |
217 | V>I | No |
ClinGen TOPMed |
|
|
rs943268573 CA54480847 |
218 | S>L | No |
ClinGen TOPMed |
|
|
rs753848593 CA1854924 |
219 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs753848593 CA1854925 |
219 | G>D | No |
ClinGen ExAC gnomAD |
|
|
rs369558685 CA1854923 |
220 | T>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1414052994 CA348182990 |
221 | L>V | No |
ClinGen gnomAD |
|
|
rs1559904337 CA348182964 |
225 | E>K | No |
ClinGen Ensembl |
|
|
rs1573372354 CA348182951 |
226 | K>N | No |
ClinGen Ensembl |
|
|
CA54480836 rs775698835 |
226 | K>T | No |
ClinGen Ensembl |
|
|
CA348182946 rs1468969262 |
227 | T>I | No |
ClinGen gnomAD |
|
|
rs199972115 CA348182943 |
228 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199972115 CA1854920 |
228 | V>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1316608834 CA348182887 |
234 | T>I | No |
ClinGen Ensembl |
|
|
rs1025656726 CA54480661 |
235 | P>R | No |
ClinGen gnomAD |
|
|
CA1854895 rs762803959 |
237 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs773094431 CA1854894 |
238 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1304675120 CA348182856 |
239 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1304675120 CA348182858 |
239 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA54480651 rs181797568 |
240 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA348182851 rs1388269875 |
240 | T>I | No |
ClinGen gnomAD |
|
|
CA348182821 rs1416293600 |
244 | R>S | No |
ClinGen gnomAD |
|
|
CA1854892 rs189181268 |
245 | R>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA1854890 rs184638564 |
245 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1854889 rs570124403 |
246 | K>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
RCV000893128 rs561007941 |
248 | Q>missing | No |
ClinVar dbSNP |
|
|
CA348182803 rs181964660 |
248 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
rs181964660 CA54480627 |
248 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
rs199840092 CA54480620 |
249 | V>A | No |
ClinGen 1000Genomes |
|
|
rs201712038 CA1854887 |
249 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA348182785 rs1467001205 |
251 | E>Q | No |
ClinGen gnomAD |
|
|
rs184508752 CA54480617 |
252 | L>M | No |
ClinGen Ensembl |
|
|
CA1854884 rs200539941 |
253 | N>S | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
rs200539941 CA1854885 |
253 | N>T | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA1854883 rs756299604 |
254 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA1854882 rs748236848 |
256 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs192831906 CA54480602 |
257 | K>E | No |
ClinGen Ensembl |
|
|
CA54480598 rs187992008 |
259 | D>N | No |
ClinGen Ensembl |
|
|
rs781538654 CA1854881 |
261 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs199696422 CA1854880 |
262 | V>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751742282 CA1854879 |
264 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
CA1854878 rs540898996 |
265 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA348182690 rs540898996 |
265 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs185171521 CA54480563 |
267 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA348182668 rs1286672820 |
268 | S>C | No |
ClinGen gnomAD |
|
|
CA1854875 rs780014703 |
269 | C>* | No |
ClinGen ExAC |
|
|
CA1854877 rs377258317 |
269 | C>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs750413051 CA1854876 |
269 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA1854874 rs149396377 |
271 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs913903284 CA54480554 |
272 | E>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA348182625 rs1448401259 |
275 | Q>K | No |
ClinGen gnomAD |
|
|
rs761368902 CA1854873 |
275 | Q>P | No |
ClinGen ExAC gnomAD |
|
|
rs192223845 CA54480534 |
276 | E>D | No |
ClinGen Ensembl |
|
|
rs763588598 CA1854871 |
277 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 278 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA1854870 rs760272804 |
278 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA1854869 rs775158986 |
278 | Q>R | No |
ClinGen ExAC |
|
|
rs771247461 CA1854868 |
279 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs748608973 CA1854864 |
280 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs748608973 CA1854865 |
280 | P>R | No |
ClinGen ExAC gnomAD |
|
|
CA1854866 rs773921168 |
280 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773921168 CA348182595 |
280 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA348182591 rs1573371953 |
281 | T>A | No |
ClinGen Ensembl |
|
|
rs1275475593 COSM1215126 CA348182583 |
282 | H>R | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA348182578 rs1463368862 |
283 | S>A | No |
ClinGen gnomAD |
|
|
CA348182572 rs755049678 |
284 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1006044 CA54480492 rs187635665 |
284 | R>Q | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs755049678 CA1854862 |
284 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747222410 CA1854861 |
287 | R>G | No |
ClinGen ExAC gnomAD |
|
|
COSM1006043 rs147757149 CA1854859 |
288 | R>* | large_intestine endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs370998435 CA1854858 |
288 | R>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370998435 CA1854857 |
288 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1559903967 CA348182542 |
289 | R>K | No |
ClinGen Ensembl |
|
|
CA1854855 rs543620300 |
289 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA54480474 rs183303856 |
290 | S>N | No |
ClinGen Ensembl |
|
|
rs112441424 CA1854854 CA54480472 |
290 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA348182521 rs1464354979 |
292 | N>S | No |
ClinGen gnomAD |
|
|
rs186765150 CA54480464 |
293 | Q>* | No |
ClinGen gnomAD |
|
|
CA348182512 rs1434732985 |
293 | Q>H | No |
ClinGen gnomAD |
|
|
CA1854852 rs760210456 |
293 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
No associated diseases with Q9BYG3
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromosome | A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. |
| condensed nuclear chromosome | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
4 GO annotations of biological process
| Name | Definition |
|---|---|
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
| protein-containing complex assembly | The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex. |
| rRNA metabolic process | The chemical reactions and pathways involving rRNA, ribosomal RNA, a structural constituent of ribosomes. |
| rRNA transcription | The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MATFSGPAGP | ILSLNPQEDV | EFQKEVAQVR | KRITQRKKQE | QLTPGVVYVR | HLPNLLDETQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IFSYFSQFGT | VTRFRLSRSK | RTGNSKGYAF | VEFESEDVAK | IVAETMNNYL | FGERLLECHF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| MPPEKVHKEL | FKDWNIPFKQ | PSYPSVKRYN | RNRTLTQKLR | MEERFKKKER | LLRKKLAKKG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| IDYDFPSLIL | QKTESISKTN | RQTSTKGQVL | RKKKKKVSGT | LDTPEKTVDS | QGPTPVCTPT |
| 250 | 260 | 270 | 280 | 290 | |
| FLERRKSQVA | ELNDDDKDDE | IVFKQPISCV | KEEIQETQTP | THSRKKRRRS | SNQ |